F216699

General Info

Members Datasets Scaffolds Average Seq Length
153 98 306 379

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100033362|Ga0075430_1000333624
Length 439
Sequence MRCLGLNALPSPGIAYRVPAQPESYGRTGPRSAVRRIPDGRLPCDNTADPLRRQVADAPVAGSVDVESSFTIARIRGIPIGVHYTWAIAIVFITWSLAAGYFPSSYPGWSRQAYWIVGAAAALLLFVSVLFHELCHSFVAQARGLAVKSITLFIFGGVSNIAQETEDPQDEFLVAIVGPLSSFALAGLFWVGLQAIPNDTSPLGALVNYLATINLGLAVFNILPGFPLDGGRVVRAILWGTTGSMVRGTNVATTIGQFVAFLFIAYGFWQIFEGELLSGIWIGFIGWFLNSAAEATRRQVQVQEGFRGIKVSSVMTPDPPVVSPALPVRALVDEYVLRRGLRALPVAQDGRIVGLVTLSDVKHLPESEWSANSVGAIMTRPPLRTIGPDAPVTRALERLVEDDVNQLLVVDRDGTLLGILTRGDVMRFLQLRGELGLRR

Samples

Sample ID Description Type Environment
1 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
31 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
34 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
50 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
51 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
52 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
53 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
54 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
55 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
56 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
57 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
58 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
59 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
60 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
61 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
62 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
63 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
64 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
65 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
66 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
67 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
68 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
69 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
70 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
71 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
72 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
73 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
74 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
78 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
79 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
85 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
86 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
87 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
88 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
90 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
96 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
97 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
98 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.39
Metatranscriptomes 2.61
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.96
Nodule 0
Rhizoplane 0.65
Rhizosphere 96.08
Stem 0
Stem Tuber 0
Unclassified 14.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075430_100033362 3300006846 Bacteria 4370
2 Ga0070683_100010474 3300005329 Bacteria 7973
3 Ga0070683_100040231 3300005329 Bacteria 4297
4 Ga0070691_10008382 3300005341 Bacteria 4733
5 Ga0070714_100001096 3300005435 Bacteria 19362
6 Ga0070713_100014687 3300005436 Bacteria 5825
7 Ga0070713_100211483 3300005436 Bacteria 1756
8 Ga0070705_100210374 3300005440 Bacteria 1340
9 Ga0070700_100055205 3300005441 Bacteria 2486
10 Ga0070694_100058503 3300005444 Bacteria 2622
11 Ga0070708_100021853 3300005445 Bacteria 5419
12 Ga0070708_100027687 3300005445 Bacteria 4866
13 Ga0070708_100066665 3300005445 Bacteria 3232
14 Ga0070708_100255095 3300005445 Bacteria 1648
15 Ga0070706_100000971 3300005467 Bacteria 31303
16 Ga0070706_100023819 3300005467 Bacteria 5636
17 Ga0070706_100024705 3300005467 Bacteria 5533
18 Ga0070707_100017721 3300005468 Bacteria 6697
19 Ga0070707_100077307 3300005468 Bacteria 3211
20 Ga0070707_100222218 3300005468 Unclassified 1839
21 Ga0070707_100278334 3300005468 Bacteria 1626
22 Ga0070698_100014861 3300005471 Bacteria 8230
23 Ga0070698_100116303 3300005471 Bacteria 2638
24 Ga0070698_100234266 3300005471 Bacteria 1769
25 Ga0070699_100017104 3300005518 Bacteria 6227
26 Ga0070699_100063346 3300005518 Bacteria 3206
27 Ga0070699_100117585 3300005518 Bacteria 2337
28 Ga0070679_100099912 3300005530 Unclassified 2889
29 Ga0070679_100260375 3300005530 Bacteria 1690
30 Ga0070684_100011252 3300005535 Bacteria 7124
31 Ga0070684_100049558 3300005535 Bacteria 3645
32 Ga0070697_100014398 3300005536 Bacteria 6211
33 Ga0070697_100060602 3300005536 Unclassified 3085
34 Ga0070697_100062150 3300005536 Bacteria 3047
35 Ga0070697_100107257 3300005536 Bacteria 2324
36 Ga0070664_100107044 3300005564 Unclassified 2437
37 Ga0068857_100000329 3300005577 Bacteria 32640
38 Ga0068856_100001495 3300005614 Bacteria 24456
39 Ga0068870_10160735 3300005840 Bacteria 1332
40 Ga0068862_100132877 3300005844 Bacteria 2203
41 Ga0075367_10005628 3300006178 Bacteria 6249
42 Ga0075428_100040548 3300006844 Bacteria 5122
43 Ga0075430_100002228 3300006846 Bacteria 16077
44 Ga0075431_100003162 3300006847 Bacteria 15928
45 Ga0075431_100214202 3300006847 Bacteria 1967
46 Ga0075431_100471566 3300006847 Bacteria 1249
47 Ga0075429_100097350 3300006880 Bacteria 2567
48 Ga0099794_10012236 3300007265 Unclassified 3695
49 Ga0111539_10001175 3300009094 Bacteria 34728
50 Ga0114129_10035026 3300009147 Bacteria 7092
51 Ga0114129_10145007 3300009147 Bacteria 3253
52 Ga0114129_10350737 3300009147 Bacteria 1955
53 Ga0114129_10474291 3300009147 Bacteria 1638
54 Ga0157369_10001178 3300013105 Bacteria 32585
55 Ga0157380_10007942 3300014326 Bacteria 7554
56 Ga0197907_11082208 3300020069 Unclassified 1472
57 Ga0206350_10262498 3300020080 Bacteria 1373
58 Ga0213876_10001043 3300021384 Bacteria 17905
59 Ga0224712_10003623 3300022467 Bacteria 4046
60 Ga0224712_10018874 3300022467 Unclassified 2314
61 Ga0209455_1000527 3300025272 Bacteria 27020
62 Ga0207684_10000476 3300025910 Bacteria 51823
63 Ga0207684_10009967 3300025910 Bacteria 8375
64 Ga0207684_10034593 3300025910 Unclassified 4293
65 Ga0207707_10203019 3300025912 Bacteria 1728
66 Ga0207707_10295331 3300025912 Bacteria 1402
67 Ga0207646_10003156 3300025922 Bacteria 18877
68 Ga0207646_10067641 3300025922 Bacteria 3190
69 Ga0207646_10136297 3300025922 Bacteria 2210
70 Ga0207700_10006450 3300025928 Bacteria 7086
71 Ga0207664_10001709 3300025929 Bacteria 14468
72 Ga0207661_10009009 3300025944 Bacteria 7150
73 Ga0207679_10009233 3300025945 Bacteria 6306
74 Ga0207708_10077736 3300026075 Bacteria 2547
75 Ga0207702_10003797 3300026078 Bacteria 13638
76 Ga0207674_10001503 3300026116 Bacteria 30071
77 Ga0207675_100231955 3300026118 Bacteria 1781
78 Ga0207428_10000628 3300027907 Bacteria 41501
79 Ga0268265_10084079 3300028380 Bacteria 2522
80 Ga0265319_1016065 3300028563 Bacteria 2877
81 Ga0265334_10012716 3300028573 Bacteria 3534
82 Ga0265318_10025169 3300028577 Bacteria 2353
83 Ga0265336_10015853 3300028666 Bacteria 2471
84 Ga0265332_10045811 3300031238 Bacteria 1884
85 Ga0265325_10010595 3300031241 Bacteria 5330
86 Ga0265340_10023471 3300031247 Bacteria 3146
87 Ga0265316_10070188 3300031344 Bacteria 2702
88 Ga0316575_10004143 3300031665 Bacteria 5085
89 Ga0316575_10011758 3300031665 Unclassified 3243
90 Ga0316579_10006641 3300031691 Bacteria 4730
91 Ga0316579_10013034 3300031691 Unclassified 3571
92 Ga0316579_10091700 3300031691 Unclassified 1451
93 Ga0265314_10062604 3300031711 Bacteria 2528
94 Ga0265342_10066717 3300031712 Bacteria 2107
95 Ga0316578_10015450 3300031728 Bacteria 4105
96 Ga0316578_10060137 3300031728 Unclassified 2236
97 Ga0316577_10000320 3300031733 Bacteria 17598
98 Ga0316577_10003073 3300031733 Bacteria 8380
99 Ga0316577_10016771 3300031733 Unclassified 4042
100 Ga0316577_10017686 3300031733 Bacteria 3939
101 Ga0316577_10021662 3300031733 Bacteria 3566
102 Ga0316577_10123242 3300031733 Unclassified 1456
103 Ga0316577_10164792 3300031733 Bacteria 1250
104 Ga0316585_10004259 3300032137 Bacteria 3974
105 Ga0316574_0025546 3300035398 Bacteria 3546
106 Ga0316582_0003373 3300036647 Bacteria 7819
107 Ga0316582_0009611 3300036647 Bacteria 5255
108 Ga0316582_0022581 3300036647 Unclassified 3737
109 Ga0316582_0039836 3300036647 Bacteria 2928
110 Ga0316582_0091731 3300036647 Bacteria 2001
111 Ga0316584_0001796 3300036712 Bacteria 13233
112 Ga0316584_0008904 3300036712 Bacteria 6940
113 Ga0316584_0048382 3300036712 Bacteria 3177
114 Ga0316584_0143842 3300036712 Bacteria 1777
115 Ga0316584_0285059 3300036712 Bacteria 1199
116 Ga0395905_0073510 3300037471 Unclassified 3205
117 Ga0316581_0000254 3300037588 Bacteria 9257
118 Ga0316581_0000286 3300037588 Bacteria 8901
119 Ga0316581_0035648 3300037588 Unclassified 1508
120 Ga0436365_1512504 3300039437 Bacteria 2823
121 Ga0436362_1118418 3300039453 Bacteria 2266
122 Ga0453684_0345093 3300044712 Bacteria 1680
123 Ga0466960_0005268 3300044901 Bacteria 5111
124 Ga0451576_0012338 3300045051 Bacteria 9603
125 Ga0466958_0003071 3300045836 Bacteria 8564
126 Ga0466958_0174050 3300045836 Unclassified 1364
127 Ga0466967_0041682 3300045976 Bacteria 3961
128 Ga0495630_0199492 3300046517 Archaea 1527
129 Ga0495652_0135176 3300046529 Bacteria 1947
130 Ga0496104_0094048 3300048907 Unclassified 2867
131 Ga0501036_0364202 3300049572 Bacteria 1207
132 Ga0501038_0066522 3300049574 Bacteria 3069
133 Ga0501040_0027748 3300049576 Bacteria 3813
134 Ga0501042_0053289 3300049578 Bacteria 2886
135 Ga0501046_0044183 3300049580 Bacteria 3544
136 Ga0501071_0032274 3300049587 Bacteria 3718
137 Ga0501075_0035925 3300049591 Bacteria 3697
138 Ga0501076_0255644 3300049592 Bacteria 1434
139 Ga0501081_0055441 3300049743 Unclassified 2739
140 Ga0501081_0097979 3300049743 Unclassified 2070
141 Ga0501035_0227633 3300049822 Bacteria 1590
142 Ga0501045_0038889 3300049824 Bacteria 3461
143 nmdc:mga06z11_50388_c1 3300050494 Unclassified 2128
144 nmdc:mga09592_32548_c1 3300050508 Bacteria 4347
145 nmdc:mga0qj67_14984_c1 3300050509 Bacteria 5865
146 nmdc:mga0qj67_63008_c1 3300050509 Bacteria 2948
147 nmdc:mga06r32_452506_c1 3300050510 Bacteria 1263
148 nmdc:mga08y16_832_c1 3300050511 Bacteria 29640
149 Ga0495619_0036309 3300053085 Bacteria 3208
150 Ga0495619_0065788 3300053085 Bacteria 2419
151 Ga0501084_0159866 3300054114 Bacteria 1900
152 Ga0590071_005212 3300059421 Bacteria 3133
153 Ga0530510_0026183 3300061734 Bacteria 4172
154 Ga0075430_100033362
155 Ga0070683_100010474
156 Ga0070683_100040231
157 Ga0070691_10008382
158 Ga0070714_100001096
159 Ga0070713_100014687
160 Ga0070713_100211483
161 Ga0070705_100210374
162 Ga0070700_100055205
163 Ga0070694_100058503
164 Ga0070708_100021853
165 Ga0070708_100027687
166 Ga0070708_100066665
167 Ga0070708_100255095
168 Ga0070706_100000971
169 Ga0070706_100023819
170 Ga0070706_100024705
171 Ga0070707_100017721
172 Ga0070707_100077307
173 Ga0070707_100222218
174 Ga0070707_100278334
175 Ga0070698_100014861
176 Ga0070698_100116303
177 Ga0070698_100234266
178 Ga0070699_100017104
179 Ga0070699_100063346
180 Ga0070699_100117585
181 Ga0070679_100099912
182 Ga0070679_100260375
183 Ga0070684_100011252
184 Ga0070684_100049558
185 Ga0070697_100014398
186 Ga0070697_100060602
187 Ga0070697_100062150
188 Ga0070697_100107257
189 Ga0070664_100107044
190 Ga0068857_100000329
191 Ga0068856_100001495
192 Ga0068870_10160735
193 Ga0068862_100132877
194 Ga0075367_10005628
195 Ga0075428_100040548
196 Ga0075430_100002228
197 Ga0075431_100003162
198 Ga0075431_100214202
199 Ga0075431_100471566
200 Ga0075429_100097350
201 Ga0099794_10012236
202 Ga0111539_10001175
203 Ga0114129_10035026
204 Ga0114129_10145007
205 Ga0114129_10350737
206 Ga0114129_10474291
207 Ga0157369_10001178
208 Ga0157380_10007942
209 Ga0197907_11082208
210 Ga0206350_10262498
211 Ga0213876_10001043
212 Ga0224712_10003623
213 Ga0224712_10018874
214 Ga0209455_1000527
215 Ga0207684_10000476
216 Ga0207684_10009967
217 Ga0207684_10034593
218 Ga0207707_10203019
219 Ga0207707_10295331
220 Ga0207646_10003156
221 Ga0207646_10067641
222 Ga0207646_10136297
223 Ga0207700_10006450
224 Ga0207664_10001709
225 Ga0207661_10009009
226 Ga0207679_10009233
227 Ga0207708_10077736
228 Ga0207702_10003797
229 Ga0207674_10001503
230 Ga0207675_100231955
231 Ga0207428_10000628
232 Ga0268265_10084079
233 Ga0265319_1016065
234 Ga0265334_10012716
235 Ga0265318_10025169
236 Ga0265336_10015853
237 Ga0265332_10045811
238 Ga0265325_10010595
239 Ga0265340_10023471
240 Ga0265316_10070188
241 Ga0316575_10004143
242 Ga0316575_10011758
243 Ga0316579_10006641
244 Ga0316579_10013034
245 Ga0316579_10091700
246 Ga0265314_10062604
247 Ga0265342_10066717
248 Ga0316578_10015450
249 Ga0316578_10060137
250 Ga0316577_10000320
251 Ga0316577_10003073
252 Ga0316577_10016771
253 Ga0316577_10017686
254 Ga0316577_10021662
255 Ga0316577_10123242
256 Ga0316577_10164792
257 Ga0316585_10004259
258 Ga0316574_0025546
259 Ga0316582_0003373
260 Ga0316582_0009611
261 Ga0316582_0022581
262 Ga0316582_0039836
263 Ga0316582_0091731
264 Ga0316584_0001796
265 Ga0316584_0008904
266 Ga0316584_0048382
267 Ga0316584_0143842
268 Ga0316584_0285059
269 Ga0395905_0073510
270 Ga0316581_0000254
271 Ga0316581_0000286
272 Ga0316581_0035648
273 Ga0436365_1512504
274 Ga0436362_1118418
275 Ga0453684_0345093
276 Ga0466960_0005268
277 Ga0451576_0012338
278 Ga0466958_0003071
279 Ga0466958_0174050
280 Ga0466967_0041682
281 Ga0495630_0199492
282 Ga0495652_0135176
283 Ga0496104_0094048
284 Ga0501036_0364202
285 Ga0501038_0066522
286 Ga0501040_0027748
287 Ga0501042_0053289
288 Ga0501046_0044183
289 Ga0501071_0032274
290 Ga0501075_0035925
291 Ga0501076_0255644
292 Ga0501081_0055441
293 Ga0501081_0097979
294 Ga0501035_0227633
295 Ga0501045_0038889
296 nmdc:mga06z11_50388_c1
297 nmdc:mga09592_32548_c1
298 nmdc:mga0qj67_14984_c1
299 nmdc:mga0qj67_63008_c1
300 nmdc:mga06r32_452506_c1
301 nmdc:mga08y16_832_c1
302 Ga0495619_0036309
303 Ga0495619_0065788
304 Ga0501084_0159866
305 Ga0590071_005212
306 Ga0530510_0026183

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00571

CBS

CBS domain

374

431

0.95

PF02163

Peptidase_M50

Peptidase family M50

120

199

0.95

PF00571

CBS

CBS domain

311

366

0.94

PF02163

Peptidase_M50

Peptidase family M50

193

264

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6h1w-assembly1.cif.gz_A crystal structure of protein mj1004 from mathanocaldococcus jannaschii 0.8625 245 365
5g5r-assembly1.cif.gz_A cbs domain tandem of site-2 protease from archaeoglobus fulgidus in complex with llama nanobody - apo form 0.85 248 365
3ghd-assembly1.cif.gz_A crystal structure of a cystathionine beta-synthase domain protein fused to a zn-ribbon-like domain 0.8461 255 314
2p9m-assembly2.cif.gz_C crystal structure of conserved hypothetical protein mj0922 from methanocaldococcus jannaschii dsm 2661 0.845 241 365
3kpc-assembly1.cif.gz_A crystal structure of the cbs domain pair of protein mj0100 in complex with 5 -methylthioadenosine and s-adenosyl-l-methionine 0.8445 245 366
ID Description Score Start End Superfamily
af_P9WHR1_245_369_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.9094 245 364 3.10.580.10
af_Q54H97_2_141_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.8755 243 365 3.10.580.10
af_P9WHR1_245_369_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.8685 245 364 3.10.580.10
3fwsA00 Alpha Beta;Roll;CBS-domain;CBS-domain 0.8605 234 369 3.10.580.10
af_C0PHI9_226_352_3.10.580.10 Alpha Beta;Roll;CBS-domain;CBS-domain 0.848 246 365 3.10.580.10
ID Description Score Start End GO Terms
AF-A0A535CDJ4-F1-model_v4 Site-2 protease family protein 0.9723 1 199 GO:0006508
GO:0008237
GO:0016020
AF-A0A7V6D457-F1-model_v4 Peptidase M50 domain-containing protein 0.9707 4 174 GO:0006508
GO:0008237
GO:0016020
AF-A0A2G2QRI0-F1-model_v4 Peptidase M50 domain-containing protein 0.9705 1 234 GO:0006508
GO:0008237
GO:0016020
AF-A0A1H4R2W8-F1-model_v4 Zn-dependent protease (Includes SpoIVFB) 0.9655 1 236 GO:0006508
GO:0008237
GO:0016020
AF-A0A432EQI2-F1-model_v4 Peptidase M50 domain-containing protein 0.9638 4 228 GO:0006508
GO:0008237
GO:0016020

Map