F216556

General Info

Members Datasets Scaffolds Average Seq Length
153 101 306 319

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10021391|Ga0081455_100213914
Length 386
Sequence MPPFLAAYLFAAQLPVWGRLSNLQRVDNPLSTDFQLWRGFNVGWTSSSAPDLPVRPSLDGRISYMKVVVADPPGGPENLKYIDQPILEPGPGEALVKLEAIGVNFIDVYFRTAFYKAPETPIKLGNEGAGTVAAVGPDVNIPIGQRVAYAMARGSYGEFAVVPQKVLTELPRNVSFENGAAVMLQGMTAHYLTRSTFPLKSGDTCLVHAAAGGAGLLIVQLAKIAGATVIGTVSTKEKAQLAREHGADHIILYTEQDFVAEVKRITANKGVDVVYDSVGKTTFHKSLDCLRPRGMMVTFGQSSGGVGEIDPLVLSQKGSLFLTRPTLAQYISDPAELKQRSSDLFKWLAEGRLKLQIHKTYNLKDAAEAHRALEARESSGKLLLKP

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
61 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
64 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
65 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
66 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
67 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
69 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
70 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
71 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
72 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
73 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
77 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
78 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
79 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
87 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
88 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
89 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
95 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
97 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
98 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
99 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
100 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
101 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.35
Metatranscriptomes 0.65
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.31
Rhizosphere 88.24
Stem 0
Stem Tuber 0
Unclassified 11.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10021391 3300005937 Bacteria 6067
2 Ga0058859_11794294 3300004798 Bacteria 6928
3 Ga0070680_100004006 3300005336 Bacteria 11021
4 Ga0070660_100084051 3300005339 Bacteria 2502
5 Ga0070675_100358550 3300005354 Bacteria 1294
6 Ga0070659_100066111 3300005366 Unclassified 2865
7 Ga0070714_100031644 3300005435 Bacteria 4416
8 Ga0070713_100055516 3300005436 Bacteria 3292
9 Ga0070705_100003203 3300005440 Bacteria 8040
10 Ga0070700_100126324 3300005441 Unclassified 1720
11 Ga0070708_100142042 3300005445 Bacteria 2227
12 Ga0070678_100391359 3300005456 Unclassified 1205
13 Ga0070681_10052486 3300005458 Bacteria 4066
14 Ga0068855_100016260 3300005563 Bacteria 8948
15 Ga0068855_100316867 3300005563 Unclassified 1725
16 Ga0068856_100008542 3300005614 Bacteria 9954
17 Ga0068852_100005280 3300005616 Bacteria 9222
18 Ga0068858_100164395 3300005842 Bacteria 2091
19 Ga0068860_100176508 3300005843 Bacteria 2065
20 Ga0068862_100016369 3300005844 Bacteria 6171
21 Ga0081455_10006385 3300005937 Bacteria 12656
22 Ga0081538_10022312 3300005981 Bacteria 4590
23 Ga0081538_10090688 3300005981 Unclassified 1581
24 Ga0081540_1010198 3300005983 Unclassified 6384
25 Ga0070717_10050891 3300006028 Bacteria 3407
26 Ga0070717_10110298 3300006028 Unclassified 2346
27 Ga0070717_10113819 3300006028 Bacteria 2310
28 Ga0075428_100039607 3300006844 Bacteria 5187
29 Ga0075428_100129168 3300006844 Bacteria 2749
30 Ga0075428_100296317 3300006844 Bacteria 1739
31 Ga0075430_100010915 3300006846 Bacteria 7695
32 Ga0075430_100032298 3300006846 Bacteria 4444
33 Ga0075430_100052932 3300006846 Bacteria 3418
34 Ga0075430_100219472 3300006846 Bacteria 1578
35 Ga0075430_100295897 3300006846 Bacteria 1339
36 Ga0075431_100000079 3300006847 Bacteria 57271
37 Ga0075431_100075012 3300006847 Bacteria 3490
38 Ga0075431_100323142 3300006847 Bacteria 1556
39 Ga0075433_10003563 3300006852 Bacteria 12012
40 Ga0075434_100010155 3300006871 Bacteria 8820
41 Ga0075429_100036248 3300006880 Bacteria 4289
42 Ga0075429_100039583 3300006880 Bacteria 4102
43 Ga0075436_100248175 3300006914 Bacteria 1267
44 Ga0075435_100251267 3300007076 Bacteria 1505
45 Ga0105240_10026984 3300009093 Bacteria 7528
46 Ga0111539_10034248 3300009094 Bacteria 6161
47 Ga0111539_10169890 3300009094 Bacteria 2548
48 Ga0111539_10353876 3300009094 Bacteria 1709
49 Ga0114129_10234074 3300009147 Bacteria 2473
50 Ga0114129_10356202 3300009147 Bacteria 1937
51 Ga0114129_10452865 3300009147 Bacteria 1683
52 Ga0114129_10458846 3300009147 Bacteria 1670
53 Ga0105248_10029827 3300009177 Bacteria 6086
54 Ga0105237_10046254 3300009545 Bacteria 4377
55 Ga0105237_10481581 3300009545 Bacteria 1247
56 Ga0157370_10001584 3300013104 Bacteria 28151
57 Ga0157370_10161355 3300013104 Bacteria 2085
58 Ga0157370_10436051 3300013104 Bacteria 1205
59 Ga0157369_10031239 3300013105 Bacteria 5867
60 Ga0163162_10054360 3300013306 Bacteria 4028
61 Ga0157372_10019362 3300013307 Bacteria 7334
62 Ga0157372_10327472 3300013307 Unclassified 1784
63 Ga0157375_10086235 3300013308 Unclassified 3190
64 Ga0157379_10021205 3300014968 Bacteria 5750
65 Ga0213873_10011553 3300021358 Bacteria 1893
66 Ga0213876_10000767 3300021384 Bacteria 22101
67 Ga0213875_10000027 3300021388 Bacteria 190420
68 Ga0213875_10052088 3300021388 Bacteria 1917
69 Ga0207699_10132831 3300025906 Bacteria 1626
70 Ga0207695_10133100 3300025913 Unclassified 2442
71 Ga0207671_10023331 3300025914 Bacteria 4666
72 Ga0207657_10028603 3300025919 Bacteria 5081
73 Ga0207687_10029085 3300025927 Bacteria 3715
74 Ga0207700_10040644 3300025928 Bacteria 3396
75 Ga0207664_10046111 3300025929 Bacteria 3421
76 Ga0207690_10046121 3300025932 Unclassified 2885
77 Ga0207711_10129220 3300025941 Bacteria 2264
78 Ga0207661_10135400 3300025944 Bacteria 2115
79 Ga0207667_10006389 3300025949 Bacteria 14288
80 Ga0207667_10022563 3300025949 Bacteria 6949
81 Ga0207667_10419624 3300025949 Unclassified 1361
82 Ga0207677_10266311 3300026023 Bacteria 1399
83 Ga0207703_10461465 3300026035 Bacteria 1188
84 Ga0207698_10022906 3300026142 Bacteria 4354
85 Ga0268265_10009228 3300028380 Bacteria 6667
86 Ga0265331_10015840 3300031250 Bacteria 3970
87 Ga0265316_10029113 3300031344 Bacteria 4546
88 Ga0265316_10036999 3300031344 Bacteria 3945
89 Ga0307416_100664761 3300032002 Bacteria 1128
90 Ga0373926_0024541 3300035083 Bacteria 2100
91 Ga0373943_0117197 3300035170 Bacteria 1412
92 Ga0373927_0004685 3300035695 Bacteria 9537
93 Ga0373927_0070819 3300035695 Bacteria 2257
94 Ga0373947_0062814 3300035725 Bacteria 2261
95 Ga0373925_0268088 3300037068 Bacteria 1373
96 Ga0436364_0004988 3300037853 Bacteria 1724
97 Ga0436364_0446012 3300037853 Bacteria 193523
98 Ga0436364_0685246 3300037853 Bacteria 4137
99 Ga0436364_0787164 3300037853 Unclassified 1855
100 Ga0436364_1048339 3300037853 Bacteria 22766
101 Ga0436364_1076953 3300037853 Bacteria 5653
102 Ga0436364_1126368 3300037853 Bacteria 6170
103 Ga0436364_1371588 3300037853 Bacteria 1607
104 Ga0436365_1378899 3300039437 Bacteria 8328
105 Ga0436365_1501935 3300039437 Bacteria 1177
106 Ga0436365_1735887 3300039437 Bacteria 11106
107 Ga0436360_1321996 3300039438 Bacteria 1990
108 Ga0436361_0876815 3300039447 Bacteria 5251
109 Ga0436363_0868876 3300039450 Unclassified 1953
110 Ga0436362_0543539 3300039453 Bacteria 5083
111 Ga0451576_0301640 3300045051 Bacteria 1676
112 Ga0466967_0131515 3300045976 Unclassified 2324
113 Ga0495580_0242994 3300046472 Bacteria 1234
114 Ga0496112_0194357 3300048915 Unclassified 1990
115 Ga0496115_0008952 3300048918 Bacteria 7427
116 Ga0501033_0030270 3300049570 Bacteria 4068
117 Ga0501037_0116659 3300049573 Bacteria 1921
118 Ga0501038_0089497 3300049574 Bacteria 2582
119 Ga0501040_0251113 3300049576 Bacteria 1262
120 Ga0501047_0012560 3300049581 Bacteria 8021
121 Ga0501047_0054799 3300049581 Bacteria 3857
122 Ga0501068_0223206 3300049584 Bacteria 1198
123 Ga0501070_0015022 3300049586 Bacteria 6515
124 Ga0501070_0183091 3300049586 Unclassified 1724
125 Ga0501073_0183109 3300049589 Bacteria 1450
126 Ga0501075_0194257 3300049591 Bacteria 1548
127 Ga0501076_0177176 3300049592 Bacteria 1738
128 Ga0501235_024642 3300049669 Unclassified 1344
129 Ga0501035_0007161 3300049822 Bacteria 10435
130 Ga0501044_0000895 3300049823 Bacteria 36008
131 Ga0501044_0048645 3300049823 Bacteria 4379
132 nmdc:mga05p37_386831_c1 3300050507 Bacteria 1637
133 nmdc:mga05p37_386851_c1 3300050507 Bacteria 1637
134 nmdc:mga09592_173959_c1 3300050508 Bacteria 1862
135 nmdc:mga09592_24055_c1 3300050508 Bacteria 5035
136 nmdc:mga0qj67_100500_c1 3300050509 Bacteria 2332
137 nmdc:mga0qj67_2489_c1 3300050509 Bacteria 13137
138 nmdc:mga0qj67_323962_c1 3300050509 Bacteria 1247
139 nmdc:mga0qj67_4112_c1 3300050509 Bacteria 10544
140 nmdc:mga06r32_14597_c1 3300050510 Bacteria 7132
141 nmdc:mga06r32_70433_c1 3300050510 Bacteria 3382
142 nmdc:mga06r32_96415_c1 3300050510 Bacteria 2897
143 nmdc:mga08y16_316288_c1 3300050511 Bacteria 1608
144 nmdc:mga08y16_577630_c1 3300050511 Bacteria 1135
145 nmdc:mga0n895_162542_c1 3300050512 Bacteria 2265
146 nmdc:mga0a205_2652_c1 3300050515 Bacteria 15818
147 nmdc:mga0a205_82575_c1 3300050515 Bacteria 3104
148 Ga0501084_0037018 3300054114 Bacteria 4077
149 Ga0501082_0001596 3300060353 Bacteria 19988
150 Ga0501082_0462110 3300060353 Bacteria 1109
151 Ga0501082_0537823 3300060353 Bacteria 1022
152 Ga0530510_0009393 3300061734 Bacteria 6857
153 Ga0530510_0090730 3300061734 Bacteria 2229
154 Ga0081455_10021391
155 Ga0058859_11794294
156 Ga0070680_100004006
157 Ga0070660_100084051
158 Ga0070675_100358550
159 Ga0070659_100066111
160 Ga0070714_100031644
161 Ga0070713_100055516
162 Ga0070705_100003203
163 Ga0070700_100126324
164 Ga0070708_100142042
165 Ga0070678_100391359
166 Ga0070681_10052486
167 Ga0068855_100016260
168 Ga0068855_100316867
169 Ga0068856_100008542
170 Ga0068852_100005280
171 Ga0068858_100164395
172 Ga0068860_100176508
173 Ga0068862_100016369
174 Ga0081455_10006385
175 Ga0081538_10022312
176 Ga0081538_10090688
177 Ga0081540_1010198
178 Ga0070717_10050891
179 Ga0070717_10110298
180 Ga0070717_10113819
181 Ga0075428_100039607
182 Ga0075428_100129168
183 Ga0075428_100296317
184 Ga0075430_100010915
185 Ga0075430_100032298
186 Ga0075430_100052932
187 Ga0075430_100219472
188 Ga0075430_100295897
189 Ga0075431_100000079
190 Ga0075431_100075012
191 Ga0075431_100323142
192 Ga0075433_10003563
193 Ga0075434_100010155
194 Ga0075429_100036248
195 Ga0075429_100039583
196 Ga0075436_100248175
197 Ga0075435_100251267
198 Ga0105240_10026984
199 Ga0111539_10034248
200 Ga0111539_10169890
201 Ga0111539_10353876
202 Ga0114129_10234074
203 Ga0114129_10356202
204 Ga0114129_10452865
205 Ga0114129_10458846
206 Ga0105248_10029827
207 Ga0105237_10046254
208 Ga0105237_10481581
209 Ga0157370_10001584
210 Ga0157370_10161355
211 Ga0157370_10436051
212 Ga0157369_10031239
213 Ga0163162_10054360
214 Ga0157372_10019362
215 Ga0157372_10327472
216 Ga0157375_10086235
217 Ga0157379_10021205
218 Ga0213873_10011553
219 Ga0213876_10000767
220 Ga0213875_10000027
221 Ga0213875_10052088
222 Ga0207699_10132831
223 Ga0207695_10133100
224 Ga0207671_10023331
225 Ga0207657_10028603
226 Ga0207687_10029085
227 Ga0207700_10040644
228 Ga0207664_10046111
229 Ga0207690_10046121
230 Ga0207711_10129220
231 Ga0207661_10135400
232 Ga0207667_10006389
233 Ga0207667_10022563
234 Ga0207667_10419624
235 Ga0207677_10266311
236 Ga0207703_10461465
237 Ga0207698_10022906
238 Ga0268265_10009228
239 Ga0265331_10015840
240 Ga0265316_10029113
241 Ga0265316_10036999
242 Ga0307416_100664761
243 Ga0373926_0024541
244 Ga0373943_0117197
245 Ga0373927_0004685
246 Ga0373927_0070819
247 Ga0373947_0062814
248 Ga0373925_0268088
249 Ga0436364_0004988
250 Ga0436364_0446012
251 Ga0436364_0685246
252 Ga0436364_0787164
253 Ga0436364_1048339
254 Ga0436364_1076953
255 Ga0436364_1126368
256 Ga0436364_1371588
257 Ga0436365_1378899
258 Ga0436365_1501935
259 Ga0436365_1735887
260 Ga0436360_1321996
261 Ga0436361_0876815
262 Ga0436363_0868876
263 Ga0436362_0543539
264 Ga0451576_0301640
265 Ga0466967_0131515
266 Ga0495580_0242994
267 Ga0496112_0194357
268 Ga0496115_0008952
269 Ga0501033_0030270
270 Ga0501037_0116659
271 Ga0501038_0089497
272 Ga0501040_0251113
273 Ga0501047_0012560
274 Ga0501047_0054799
275 Ga0501068_0223206
276 Ga0501070_0015022
277 Ga0501070_0183091
278 Ga0501073_0183109
279 Ga0501075_0194257
280 Ga0501076_0177176
281 Ga0501235_024642
282 Ga0501035_0007161
283 Ga0501044_0000895
284 Ga0501044_0048645
285 nmdc:mga05p37_386831_c1
286 nmdc:mga05p37_386851_c1
287 nmdc:mga09592_173959_c1
288 nmdc:mga09592_24055_c1
289 nmdc:mga0qj67_100500_c1
290 nmdc:mga0qj67_2489_c1
291 nmdc:mga0qj67_323962_c1
292 nmdc:mga0qj67_4112_c1
293 nmdc:mga06r32_14597_c1
294 nmdc:mga06r32_70433_c1
295 nmdc:mga06r32_96415_c1
296 nmdc:mga08y16_316288_c1
297 nmdc:mga08y16_577630_c1
298 nmdc:mga0n895_162542_c1
299 nmdc:mga0a205_2652_c1
300 nmdc:mga0a205_82575_c1
301 Ga0501084_0037018
302 Ga0501082_0001596
303 Ga0501082_0462110
304 Ga0501082_0537823
305 Ga0530510_0009393
306 Ga0530510_0090730

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

90

172

0.91

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

213

338

0.88

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

245

384

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.9796 1 322
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.9766 1 322
4rvu-assembly2.cif.gz_C the native structure of mycobacterial rv1454c complexed with nadph 0.9736 1 322
3jyl-assembly1.cif.gz_A crystal structures of pseudomonas syringae pv. tomato dc3000 quinone oxidoreductase 0.973 2 322
4rvu-assembly2.cif.gz_C the native structure of mycobacterial rv1454c complexed with nadph 0.9707 1 322
ID Description Score Start End Superfamily
af_I1LVH0_176_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9876 122 266 3.40.50.720
af_Q336S6_1_326_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9822 2 322 3.90.180.10
af_O74489_1_324_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9786 2 321 3.40.50.300
af_P28304_2_327_2.170.150.20 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Peptide methionine sulfoxide reductase. 0.9764 1 322 2.170.150.20
af_Q336S6_1_326_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9762 2 322 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A160T4B0-F1-model_v4 Quinone oxidoreductase (EC 1.6.5.5) 0.9929 1 322 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A160T4B0-F1-model_v4 Quinone oxidoreductase (EC 1.6.5.5) 0.9899 1 322 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A7U7GCB8-F1-model_v4 Quinone oxidoreductase, NADPH-dependent (EC 1.6.5.5) 0.9888 2 322 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A5B7AB61-F1-model_v4 Putative quinone oxidoreductase isoform X2 (EC 1.6.5.5) 0.9881 119 322 GO:0003960
GO:0005829
GO:0035925
GO:0070402
AF-A0A853IFL3-F1-model_v4 deleted 0.9871 2 236

Map