F215089

General Info

Members Datasets Scaffolds Average Seq Length
152 95 304 691

Family's Representative Sequence

Representative Sequence 3300044684|Ga0466966_0031564|Ga0466966_0031564_654_2675
Length 673
Sequence VPDGNAGPALMPLPAHAQWSNEQMTVTDTFAIRITGANDPRVRAAATRLLNAWQERTGITFPHTAAGAFAFDNAAAALTIVCDSASAAIPQLGEDESYVLDVTGDRATLHAPTTVGVLRGLATLTQTLEGDAHGWHVRAGHIQDAPRFRWRGLMIDVCRHWEPIEVLKRNLDGMALVKLNVLHLHLTDDQGFRIESKAVPQLHERGSDGHYFTQDQIREIIAYAAERGIRVVPEFDTPGHATSWVTAFPELASAPGPYVIERGWGVFDPVLDPTNEQTYAMLDKFLGEMAELFPDPYLHIGGDENNGKQWNANPRIQAFIREHDLKDNGGLHAYFNRRVRDILQRHGKRLVGWDEILHRDLPKDSVVHSWRGADGLAAAATQGYATILSNGYYIDLCQPAAFHYRNDPIPAGTKLSSAEQERILGGEATMWGEWVTPETIDSRIWPRTAAIAERLWSPREVNDVADMYRRLPVVSRRLEEAGMLHERNRPEMIRRFVGDPADPAMCAALGVLVDGVEPVKIYARNSQQPGITQLSALTGLADCARPESEVARRFAEAVNRLVENGNGAADENDAKRAHDALVSWRNAGSYVVDHAATAGARVSNEAVPVASNLLSVATIGSQALEYVQSRQKPPVSWATSARATLANASKPSPTAVELPMLGAIAMLVEAATR

Samples

Sample ID Description Type Environment
1 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
76 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
80 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
83 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
84 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
85 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
86 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
87 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
88 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
89 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
90 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
91 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
92 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
93 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
94 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
95 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.66
Rhizosphere 98.03
Stem 0
Stem Tuber 0
Unclassified 11.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466966_0031564 3300044684 Bacteria 3435
2 JGI24751J29686_10000108 3300002459 Bacteria 44377
3 Ga0065715_10002286 3300005293 Bacteria 7083
4 Ga0065715_10003583 3300005293 Bacteria 5891
5 Ga0065707_10003624 3300005295 Bacteria 4064
6 Ga0070670_100018053 3300005331 Bacteria 6055
7 Ga0068869_100004211 3300005334 Bacteria 8929
8 Ga0068869_100087793 3300005334 Bacteria 2333
9 Ga0070680_100000713 3300005336 Bacteria 23096
10 Ga0070682_100001242 3300005337 Bacteria 14484
11 Ga0070671_100051966 3300005355 Unclassified 3408
12 Ga0070688_100036072 3300005365 Bacteria 3006
13 Ga0070703_10000042 3300005406 Bacteria 62674
14 Ga0070703_10000852 3300005406 Bacteria 9850
15 Ga0070709_10000002 3300005434 Bacteria 322903
16 Ga0070705_100015499 3300005440 Bacteria 3943
17 Ga0070700_100004720 3300005441 Bacteria 7141
18 Ga0070700_100014012 3300005441 Bacteria 4519
19 Ga0070681_10005548 3300005458 Bacteria 12191
20 Ga0070681_10011639 3300005458 Bacteria 8710
21 Ga0070706_100000023 3300005467 Bacteria 159966
22 Ga0070707_100061288 3300005468 Bacteria 3608
23 Ga0070698_100001999 3300005471 Bacteria 22641
24 Ga0070698_100002844 3300005471 Bacteria 19041
25 Ga0070698_100021061 3300005471 Bacteria 6829
26 Ga0070698_100053855 3300005471 Bacteria 4087
27 Ga0070699_100000933 3300005518 Bacteria 27278
28 Ga0070699_100001588 3300005518 Bacteria 20748
29 Ga0070699_100034097 3300005518 Bacteria 4399
30 Ga0070679_100005374 3300005530 Bacteria 11861
31 Ga0070697_100001252 3300005536 Bacteria 19205
32 Ga0070697_100001599 3300005536 Bacteria 17273
33 Ga0070696_100001193 3300005546 Bacteria 16866
34 Ga0070696_100011297 3300005546 Bacteria 5980
35 Ga0070696_100018759 3300005546 Bacteria 4680
36 Ga0068854_100036211 3300005578 Bacteria 3459
37 Ga0068859_100020196 3300005617 Bacteria 6688
38 Ga0068859_100056191 3300005617 Bacteria 3960
39 Ga0068859_100113752 3300005617 Unclassified 2770
40 Ga0068859_100116208 3300005617 Bacteria 2740
41 Ga0068859_100155152 3300005617 Bacteria 2366
42 Ga0068864_100013801 3300005618 Bacteria 6695
43 Ga0068864_100067774 3300005618 Bacteria 3100
44 Ga0068861_100020125 3300005719 Bacteria 4774
45 Ga0068861_100022004 3300005719 Bacteria 4587
46 Ga0068858_100024162 3300005842 Bacteria 5663
47 Ga0068858_100088837 3300005842 Unclassified 2875
48 Ga0068860_100017224 3300005843 Bacteria 7042
49 Ga0068860_100041356 3300005843 Unclassified 4403
50 Ga0068860_100099068 3300005843 Unclassified 2780
51 Ga0068862_100055611 3300005844 Bacteria 3389
52 Ga0081539_10000372 3300005985 Bacteria 98410
53 Ga0081539_10005856 3300005985 Bacteria 12189
54 Ga0070715_10000030 3300006163 Bacteria 88060
55 Ga0068871_100017216 3300006358 Bacteria 5464
56 Ga0068865_100074044 3300006881 Bacteria 2424
57 Ga0075436_100000039 3300006914 Bacteria 82437
58 Ga0075436_100018949 3300006914 Bacteria 4713
59 Ga0097620_100007795 3300006931 Bacteria 10867
60 Ga0097620_100009208 3300006931 Bacteria 9973
61 Ga0097620_100020196 3300006931 Bacteria 6688
62 Ga0097620_100056187 3300006931 Bacteria 3960
63 Ga0097620_100113751 3300006931 Unclassified 2770
64 Ga0097620_100116205 3300006931 Bacteria 2740
65 Ga0097620_100155149 3300006931 Bacteria 2366
66 Ga0105240_10084677 3300009093 Unclassified 3887
67 Ga0111539_10226369 3300009094 Bacteria 2178
68 Ga0105247_10000463 3300009101 Bacteria 34015
69 Ga0114129_10016033 3300009147 Bacteria 10658
70 Ga0114129_10031612 3300009147 Bacteria 7482
71 Ga0114129_10043297 3300009147 Bacteria 6334
72 Ga0114129_10171069 3300009147 Unclassified 2962
73 Ga0114129_10273522 3300009147 Bacteria 2259
74 Ga0105243_10059022 3300009148 Bacteria 3060
75 Ga0105237_10000835 3300009545 Bacteria 42094
76 Ga0105237_10050723 3300009545 Bacteria 4169
77 Ga0105237_10103961 3300009545 Unclassified 2832
78 Ga0105249_10008390 3300009553 Bacteria 8999
79 Ga0105249_10033173 3300009553 Unclassified 4674
80 Ga0105239_10029362 3300010375 Bacteria 6045
81 Ga0157378_10002600 3300013297 Bacteria 16074
82 Ga0163162_10003072 3300013306 Bacteria 15954
83 Ga0157372_10028380 3300013307 Bacteria 6105
84 Ga0157372_10053804 3300013307 Bacteria 4488
85 Ga0157375_10057423 3300013308 Unclassified 3847
86 Ga0163163_10002328 3300014325 Bacteria 16053
87 Ga0163163_10005436 3300014325 Bacteria 11016
88 Ga0163163_10022423 3300014325 Bacteria 5979
89 Ga0163163_10054985 3300014325 Bacteria 3934
90 Ga0157380_10000582 3300014326 Bacteria 22538
91 Ga0157380_10006790 3300014326 Bacteria 8086
92 Ga0157380_10084193 3300014326 Bacteria 2607
93 Ga0157379_10026084 3300014968 Bacteria 5200
94 Ga0213876_10000205 3300021384 Bacteria 59996
95 Ga0207653_10000018 3300025885 Bacteria 141131
96 Ga0207710_10000880 3300025900 Bacteria 16111
97 Ga0207710_10001766 3300025900 Bacteria 10439
98 Ga0207685_10000009 3300025905 Bacteria 242842
99 Ga0207699_10000001 3300025906 Bacteria 695560
100 Ga0207643_10018361 3300025908 Unclassified 3831
101 Ga0207684_10000329 3300025910 Bacteria 66627
102 Ga0207684_10016478 3300025910 Bacteria 6345
103 Ga0207684_10057542 3300025910 Bacteria 3299
104 Ga0207707_10000024 3300025912 Bacteria 183501
105 Ga0207707_10024805 3300025912 Bacteria 5246
106 Ga0207671_10005253 3300025914 Bacteria 12024
107 Ga0207660_10005588 3300025917 Bacteria 8165
108 Ga0207652_10000189 3300025921 Bacteria 64976
109 Ga0207646_10005971 3300025922 Bacteria 12700
110 Ga0207646_10047064 3300025922 Bacteria 3869
111 Ga0207694_10001707 3300025924 Bacteria 18375
112 Ga0207650_10000007 3300025925 Bacteria 530810
113 Ga0207665_10000004 3300025939 Bacteria 218220
114 Ga0207711_10040915 3300025941 Bacteria 3944
115 Ga0207689_10002208 3300025942 Bacteria 18248
116 Ga0207712_10000656 3300025961 Bacteria 26911
117 Ga0207712_10001101 3300025961 Bacteria 18895
118 Ga0207640_10026943 3300025981 Bacteria 3497
119 Ga0207640_10064082 3300025981 Bacteria 2446
120 Ga0207676_10010367 3300026095 Bacteria 6635
121 Ga0207674_10088879 3300026116 Bacteria 3082
122 Ga0207675_100010730 3300026118 Bacteria 8582
123 Ga0207675_100036176 3300026118 Bacteria 4605
124 Ga0207675_100044142 3300026118 Bacteria 4164
125 Ga0268264_10030320 3300028381 Bacteria 4432
126 Ga0268264_10050937 3300028381 Unclassified 3449
127 Ga0307513_10034964 3300031456 Bacteria 5630
128 Ga0307405_10007055 3300031731 Bacteria 5585
129 Ga0307413_10004821 3300031824 Bacteria 5928
130 Ga0307406_10005889 3300031901 Bacteria 6727
131 Ga0307416_100017001 3300032002 Bacteria 5073
132 Ga0307411_10003745 3300032005 Bacteria 7132
133 Ga0307415_100064514 3300032126 Bacteria 2548
134 Ga0395905_0008297 3300037471 Bacteria 10249
135 Ga0439458_0000866 3300042157 Bacteria 7839
136 Ga0495668_0000552 3300046616 Bacteria 46274
137 Ga0496113_0013739 3300048916 Bacteria 5499
138 Ga0501217_001085 3300049661 Bacteria 4951
139 Ga0501223_006824 3300049663 Bacteria 2347
140 Ga0501233_002872 3300049668 Bacteria 3067
141 Ga0501257_008079 3300049686 Bacteria 2360
142 Ga0501268_000348 3300049765 Unclassified 4820
143 Ga0501270_000736 3300049767 Unclassified 2903
144 nmdc:mga05p37_65819_c1 3300050507 Bacteria 4459
145 nmdc:mga08y16_64798_c1 3300050511 Bacteria 3815
146 nmdc:mga0n895_61210_c1 3300050512 Unclassified 3715
147 nmdc:mga0n895_77479_c1 3300050512 Bacteria 3307
148 nmdc:mga0n895_84917_c1 3300050512 Unclassified 3159
149 nmdc:mga08x19_26_c1 3300050514 Bacteria 228913
150 nmdc:mga08x19_39237_c1 3300050514 Bacteria 3010
151 nmdc:mga0a205_36949_c1 3300050515 Unclassified 4695
152 nmdc:mga0a205_53912_c1 3300050515 Bacteria 3881
153 Ga0466966_0031564
154 JGI24751J29686_10000108
155 Ga0065715_10002286
156 Ga0065715_10003583
157 Ga0065707_10003624
158 Ga0070670_100018053
159 Ga0068869_100004211
160 Ga0068869_100087793
161 Ga0070680_100000713
162 Ga0070682_100001242
163 Ga0070671_100051966
164 Ga0070688_100036072
165 Ga0070703_10000042
166 Ga0070703_10000852
167 Ga0070709_10000002
168 Ga0070705_100015499
169 Ga0070700_100004720
170 Ga0070700_100014012
171 Ga0070681_10005548
172 Ga0070681_10011639
173 Ga0070706_100000023
174 Ga0070707_100061288
175 Ga0070698_100001999
176 Ga0070698_100002844
177 Ga0070698_100021061
178 Ga0070698_100053855
179 Ga0070699_100000933
180 Ga0070699_100001588
181 Ga0070699_100034097
182 Ga0070679_100005374
183 Ga0070697_100001252
184 Ga0070697_100001599
185 Ga0070696_100001193
186 Ga0070696_100011297
187 Ga0070696_100018759
188 Ga0068854_100036211
189 Ga0068859_100020196
190 Ga0068859_100056191
191 Ga0068859_100113752
192 Ga0068859_100116208
193 Ga0068859_100155152
194 Ga0068864_100013801
195 Ga0068864_100067774
196 Ga0068861_100020125
197 Ga0068861_100022004
198 Ga0068858_100024162
199 Ga0068858_100088837
200 Ga0068860_100017224
201 Ga0068860_100041356
202 Ga0068860_100099068
203 Ga0068862_100055611
204 Ga0081539_10000372
205 Ga0081539_10005856
206 Ga0070715_10000030
207 Ga0068871_100017216
208 Ga0068865_100074044
209 Ga0075436_100000039
210 Ga0075436_100018949
211 Ga0097620_100007795
212 Ga0097620_100009208
213 Ga0097620_100020196
214 Ga0097620_100056187
215 Ga0097620_100113751
216 Ga0097620_100116205
217 Ga0097620_100155149
218 Ga0105240_10084677
219 Ga0111539_10226369
220 Ga0105247_10000463
221 Ga0114129_10016033
222 Ga0114129_10031612
223 Ga0114129_10043297
224 Ga0114129_10171069
225 Ga0114129_10273522
226 Ga0105243_10059022
227 Ga0105237_10000835
228 Ga0105237_10050723
229 Ga0105237_10103961
230 Ga0105249_10008390
231 Ga0105249_10033173
232 Ga0105239_10029362
233 Ga0157378_10002600
234 Ga0163162_10003072
235 Ga0157372_10028380
236 Ga0157372_10053804
237 Ga0157375_10057423
238 Ga0163163_10002328
239 Ga0163163_10005436
240 Ga0163163_10022423
241 Ga0163163_10054985
242 Ga0157380_10000582
243 Ga0157380_10006790
244 Ga0157380_10084193
245 Ga0157379_10026084
246 Ga0213876_10000205
247 Ga0207653_10000018
248 Ga0207710_10000880
249 Ga0207710_10001766
250 Ga0207685_10000009
251 Ga0207699_10000001
252 Ga0207643_10018361
253 Ga0207684_10000329
254 Ga0207684_10016478
255 Ga0207684_10057542
256 Ga0207707_10000024
257 Ga0207707_10024805
258 Ga0207671_10005253
259 Ga0207660_10005588
260 Ga0207652_10000189
261 Ga0207646_10005971
262 Ga0207646_10047064
263 Ga0207694_10001707
264 Ga0207650_10000007
265 Ga0207665_10000004
266 Ga0207711_10040915
267 Ga0207689_10002208
268 Ga0207712_10000656
269 Ga0207712_10001101
270 Ga0207640_10026943
271 Ga0207640_10064082
272 Ga0207676_10010367
273 Ga0207674_10088879
274 Ga0207675_100010730
275 Ga0207675_100036176
276 Ga0207675_100044142
277 Ga0268264_10030320
278 Ga0268264_10050937
279 Ga0307513_10034964
280 Ga0307405_10007055
281 Ga0307413_10004821
282 Ga0307406_10005889
283 Ga0307416_100017001
284 Ga0307411_10003745
285 Ga0307415_100064514
286 Ga0395905_0008297
287 Ga0439458_0000866
288 Ga0495668_0000552
289 Ga0496113_0013739
290 Ga0501217_001085
291 Ga0501223_006824
292 Ga0501233_002872
293 Ga0501257_008079
294 Ga0501268_000348
295 Ga0501270_000736
296 nmdc:mga05p37_65819_c1
297 nmdc:mga08y16_64798_c1
298 nmdc:mga0n895_61210_c1
299 nmdc:mga0n895_77479_c1
300 nmdc:mga0n895_84917_c1
301 nmdc:mga08x19_26_c1
302 nmdc:mga08x19_39237_c1
303 nmdc:mga0a205_36949_c1
304 nmdc:mga0a205_53912_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00728

Glyco_hydro_20

Glycosyl hydrolase family 20, catalytic domain

148

459

0.94

PF02838

Glyco_hydro_20b

Glycosyl hydrolase family 20, domain 2

7

145

0.81

PF14845

Glycohydro_20b2

beta-acetyl hexosaminidase like

10

127

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1np0-assembly1.cif.gz_D human lysosomal beta-hexosaminidase isoform b in complex with intermediate analogue nag-thiazoline 0.9209 290 505
2gk1-assembly1.cif.gz_I x-ray crystal structure of ngt-bound hexa 0.9102 87 505
3lmy-assembly1.cif.gz_A-2 the crystal structure of beta-hexosaminidase b in complex with pyrimethamine 0.9003 33 505
6q63-assembly3.cif.gz_C bt0459 0.8997 32 509
2gk1-assembly1.cif.gz_M x-ray crystal structure of ngt-bound hexa 0.8947 92 278
ID Description Score Start End Superfamily
3lmyA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9214 165 505 3.20.20.80
af_Q54K56_193_563_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.902 165 507 3.20.20.80
af_A0A1D6G7A1_170_514_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9013 165 506 3.20.20.80
3lmyA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8959 165 505 3.20.20.80
af_P13723_153_511_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8935 165 506 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A357T247-F1-model_v4 beta-N-acetylhexosaminidase (EC 3.2.1.52) 0.9719 33 189 GO:0005975
GO:0016020
GO:0016231
GO:0030203
AF-A0A2V9ZN14-F1-model_v4 Uncharacterized protein 0.9653 588 681
AF-A0A4V6KNI3-F1-model_v4 beta-N-acetylhexosaminidase (EC 3.2.1.52) (Beta-N-acetylhexosaminidase) 0.9629 106 319 GO:0005975
GO:0016020
GO:0016231
GO:0030203
AF-A0A2V9NEL3-F1-model_v4 Beta-N-acetylhexosaminidase 0.9443 308 477 GO:0005764
GO:0005975
GO:0006689
GO:0016020
GO:0016231
GO:0030203
AF-A0A820FSJ2-F1-model_v4 beta-N-acetylhexosaminidase (EC 3.2.1.52) 0.9377 105 490 GO:0004563
GO:0005764
GO:0005975
GO:0006689
GO:0016020
GO:0030203

Map