F214826

General Info

Members Datasets Scaffolds Average Seq Length
152 37 304 322

Family's Representative Sequence

Representative Sequence 3300033541|Ga0316596_1014179|Ga0316596_10141792
Length 338
Sequence MAGQVFAYIIHKEGKADDSAQELAVAAGKIFPDASPTAIVCGAGSDLDAVCSEVAALYKEVWKFDNEALAYPNAEAIRKLLVTVLPQDAVVLVPHDTFGMDLSPGLSIKLDSVFISDVVAFDGLDGDTLKVIRQEFSGQVSTHSSCDISTGAVINIRPGVFQVEESGAAAGGQVVDKSGDIPDLTVGRRFLEVVEAEVGDVDITKEDVLVSVGRGIEDEDNIEIADELAEAMGAVVSCSRPIVDAKWLEKSRQVGTSGQTVKPKVYLALGISGSFQHLGGLKGNPYIVAVNKNPKAPIFQVADVGVVQDLLEFVPVLTEKNTGKQITLGRKCLKFQNA

Samples

Sample ID Description Type Environment
1 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
4 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
6 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
7 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
8 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
9 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
10 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
11 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
12 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
13 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
14 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
15 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
16 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
17 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
18 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
19 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
20 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
21 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
22 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
23 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
24 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
25 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
26 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
27 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
28 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
29 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
30 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
31 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
32 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
33 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
34 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
35 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
36 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
37 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 85.53
Metatranscriptomes 13.16
Isolates 1.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 68.42
Stem 0
Stem Tuber 0
Unclassified 3.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316596_1014179 3300033541 Bacteria 1974
2 JGI25407J50210_10001242 3300003373 Bacteria 5697
3 Ga0068864_100317595 3300005618 Bacteria 1462
4 Ga0081538_10000337 3300005981 Bacteria 53196
5 Ga0081538_10007773 3300005981 Bacteria 9216
6 Ga0163163_10355863 3300014325 Unclassified 1520
7 Ga0207711_10099081 3300025941 Bacteria 2576
8 Ga0316575_10028382 3300031665 Bacteria 2182
9 Ga0316579_10001311 3300031691 Bacteria 8988
10 Ga0316579_10044934 3300031691 Unclassified 2058
11 Ga0316579_10054099 3300031691 Bacteria 1881
12 Ga0316579_10074338 3300031691 Bacteria 1614
13 Ga0316576_10000099 3300031727 Bacteria 31461
14 Ga0316576_10016395 3300031727 Bacteria 5002
15 Ga0316576_10056770 3300031727 Bacteria 2860
16 Ga0316576_10075855 3300031727 Bacteria 2487
17 Ga0316576_10094334 3300031727 Bacteria 2231
18 Ga0316576_10096507 3300031727 Bacteria 2206
19 Ga0316576_10111874 3300031727 Bacteria 2047
20 Ga0316576_10157389 3300031727 Bacteria 1713
21 Ga0316576_10229189 3300031727 Bacteria 1397
22 Ga0316576_10370905 3300031727 Bacteria 1063
23 Ga0316578_10015007 3300031728 Bacteria 4155
24 Ga0316578_10018843 3300031728 Bacteria 3790
25 Ga0316578_10037711 3300031728 Bacteria 2785
26 Ga0316578_10062508 3300031728 Bacteria 2195
27 Ga0316578_10081944 3300031728 Bacteria 1920
28 Ga0316578_10098175 3300031728 Bacteria 1755
29 Ga0316578_10112185 3300031728 Bacteria 1638
30 Ga0316578_10112727 3300031728 Bacteria 1634
31 Ga0316578_10141030 3300031728 Bacteria 1452
32 Ga0316577_10071186 3300031733 Bacteria 1940
33 Ga0316577_10115133 3300031733 Bacteria 1509
34 Ga0316577_10152511 3300031733 Bacteria 1302
35 Ga0316583_10001184 3300032133 Bacteria 8551
36 Ga0316583_10009841 3300032133 Bacteria 3445
37 Ga0316583_10069568 3300032133 Bacteria 1231
38 Ga0316583_10091453 3300032133 Bacteria 1061
39 Ga0316585_10002095 3300032137 Bacteria 5358
40 Ga0316580_10030477 3300032139 Bacteria 1670
41 Ga0316593_10002372 3300032168 Bacteria 4438
42 Ga0316593_10005721 3300032168 Bacteria 3306
43 Ga0316593_10011908 3300032168 Bacteria 2540
44 Ga0316593_10020843 3300032168 Bacteria 2043
45 Ga0316593_10022249 3300032168 Bacteria 1990
46 Ga0316593_10062021 3300032168 Bacteria 1280
47 Ga0316593_10070360 3300032168 Bacteria 1209
48 Ga0316588_1010872 3300033528 Bacteria 1929
49 Ga0316588_1047877 3300033528 Bacteria 1033
50 Ga0316596_1004392 3300033541 Bacteria 3159
51 Ga0316596_1006370 3300033541 Bacteria 2743
52 Ga0316596_1009288 3300033541 Bacteria 2358
53 Ga0316596_1011980 3300033541 Bacteria 2127
54 Ga0316596_1014978 3300033541 Bacteria 1929
55 Ga0316596_1021348 3300033541 Archaea 1651
56 Ga0316596_1026283 3300033541 Bacteria 1500
57 Ga0316596_1047130 3300033541 Bacteria 1139
58 Ga0316596_1049360 3300033541 Bacteria 1113
59 Ga0316596_1051318 3300033541 Bacteria 1092
60 Ga0373951_0022151 3300035091 Bacteria 1461
61 Ga0316574_0000237 3300035398 Bacteria 19967
62 Ga0316574_0006944 3300035398 Bacteria 6164
63 Ga0316574_0007821 3300035398 Bacteria 5892
64 Ga0316574_0018125 3300035398 Bacteria 4131
65 Ga0316574_0215363 3300035398 Bacteria 1232
66 Ga0316582_0011915 3300036647 Bacteria 4831
67 Ga0316582_0026450 3300036647 Bacteria 3493
68 Ga0316582_0046713 3300036647 Bacteria 2730
69 Ga0316582_0047701 3300036647 Bacteria 2705
70 Ga0316582_0136040 3300036647 Bacteria 1654
71 Ga0316582_0139310 3300036647 Unclassified 1635
72 Ga0316582_0145064 3300036647 Bacteria 1602
73 Ga0316582_0149351 3300036647 Bacteria 1579
74 Ga0316582_0175617 3300036647 Unclassified 1456
75 Ga0316582_0294989 3300036647 Unclassified 1114
76 Ga0316582_0374221 3300036647 Bacteria 980
77 Ga0316584_0000700 3300036712 Bacteria 18570
78 Ga0316584_0003841 3300036712 Bacteria 9850
79 Ga0316584_0023000 3300036712 Bacteria 4550
80 Ga0316584_0024019 3300036712 Bacteria 4457
81 Ga0316584_0027714 3300036712 Bacteria 4171
82 Ga0316584_0068723 3300036712 Bacteria 2655
83 Ga0316584_0072137 3300036712 Bacteria 2588
84 Ga0316584_0076638 3300036712 Bacteria 2505
85 Ga0316584_0109843 3300036712 Bacteria 2063
86 Ga0316584_0151913 3300036712 Bacteria 1723
87 Ga0316581_0001301 3300037588 Bacteria 5547
88 Ga0400484_03212 3300038725 Bacteria 6549
89 Ga0400484_21344 3300038725 Bacteria 14441
90 Ga0400490_03588 3300038726 Bacteria 18058
91 Ga0400490_32210 3300038726 Bacteria 3452
92 Ga0400490_35109 3300038726 Bacteria 1984
93 Ga0400490_37139 3300038726 Bacteria 39208
94 Ga0400491_02539 3300038727 Bacteria 2293
95 Ga0400491_13864 3300038727 Bacteria 6266
96 Ga0400485_02045 3300038735 Bacteria 7246
97 Ga0400485_06211 3300038735 Bacteria 30943
98 Ga0400485_06555 3300038735 Bacteria 71659
99 Ga0400485_10030 3300038735 Bacteria 7022
100 Ga0400485_19199 3300038735 Bacteria 7242
101 Ga0400488_10169 3300038741 Bacteria 7748
102 Ga0400488_11757 3300038741 Bacteria 1651
103 Ga0400488_31787 3300038741 Bacteria 3796
104 Ga0400488_37362 3300038741 Bacteria 1815
105 Ga0400488_38676 3300038741 Bacteria 1406
106 Ga0400486_03375 3300038742 Bacteria 25334
107 Ga0400486_05265 3300038742 Bacteria 61476
108 Ga0400486_14001 3300038742 Bacteria 7746
109 Ga0400486_17803 3300038742 Bacteria 4224
110 Ga0400486_22641 3300038742 Bacteria 32050
111 Ga0400486_22976 3300038742 Bacteria 93315
112 Ga0400483_014335 3300039062 Bacteria 2254
113 Ga0400483_059416 3300039062 Bacteria 3814
114 Ga0400483_059995 3300039062 Bacteria 1480
115 Ga0400483_115138 3300039062 Bacteria 2381
116 Ga0400483_117247 3300039062 Bacteria 4828
117 Ga0400483_145723 3300039062 Bacteria 34433
118 Ga0400483_199054 3300039062 Bacteria 2598
119 Ga0400483_202262 3300039062 Bacteria 3975
120 Ga0400483_207829 3300039062 Bacteria 67117
121 Ga0400483_208358 3300039062 Bacteria 17273
122 Ga0400483_242607 3300039062 Bacteria 2917
123 Ga0400483_266432 3300039062 Bacteria 2017
124 Ga0400489_03049 3300039093 Bacteria 14757
125 Ga0400489_20945 3300039093 Bacteria 11502
126 Ga0400489_28764 3300039093 Bacteria 8188
127 Ga0400489_66913 3300039093 Bacteria 21932
128 Ga0400489_82117 3300039093 Bacteria 39560
129 Ga0400489_83876 3300039093 Bacteria 27736
130 Ga0400489_90203 3300039093 Bacteria 38544
131 Ga0400487_06228 3300039110 Bacteria 38638
132 Ga0400487_09552 3300039110 Bacteria 12045
133 Ga0400487_09880 3300039110 Bacteria 2255
134 Ga0400487_21303 3300039110 Bacteria 74949
135 Ga0451577_0003510 3300042876 Bacteria 17383
136 Ga0451577_0008141 3300042876 Bacteria 10223
137 Ga0451577_0013407 3300042876 Bacteria 7672
138 Ga0451577_0086146 3300042876 Bacteria 2803
139 Ga0451577_0365290 3300042876 Bacteria 1309
140 Ga0453683_0177810 3300044673 Bacteria 1349
141 Ga0453684_0002307 3300044712 Bacteria 46891
142 Ga0453684_0003023 3300044712 Bacteria 39111
143 Ga0453684_0029438 3300044712 Bacteria 7795
144 Ga0453684_0094286 3300044712 Bacteria 3683
145 Ga0453684_0098524 3300044712 Bacteria 3583
146 Ga0453684_0147194 3300044712 Bacteria 2804
147 Ga0453684_0190332 3300044712 Bacteria 2401
148 Ga0453684_0507830 3300044712 Bacteria 1334
149 Ga0451576_0033188 3300045051 Bacteria 5488
150 Ga0501034_0004430 3300049571 Bacteria 15631
151 2585299658 2582581312 Bacteria 7308206
152 2740990453 2740891818 Bacteria 6711283
153 Ga0316596_1014179
154 JGI25407J50210_10001242
155 Ga0068864_100317595
156 Ga0081538_10000337
157 Ga0081538_10007773
158 Ga0163163_10355863
159 Ga0207711_10099081
160 Ga0316575_10028382
161 Ga0316579_10001311
162 Ga0316579_10044934
163 Ga0316579_10054099
164 Ga0316579_10074338
165 Ga0316576_10000099
166 Ga0316576_10016395
167 Ga0316576_10056770
168 Ga0316576_10075855
169 Ga0316576_10094334
170 Ga0316576_10096507
171 Ga0316576_10111874
172 Ga0316576_10157389
173 Ga0316576_10229189
174 Ga0316576_10370905
175 Ga0316578_10015007
176 Ga0316578_10018843
177 Ga0316578_10037711
178 Ga0316578_10062508
179 Ga0316578_10081944
180 Ga0316578_10098175
181 Ga0316578_10112185
182 Ga0316578_10112727
183 Ga0316578_10141030
184 Ga0316577_10071186
185 Ga0316577_10115133
186 Ga0316577_10152511
187 Ga0316583_10001184
188 Ga0316583_10009841
189 Ga0316583_10069568
190 Ga0316583_10091453
191 Ga0316585_10002095
192 Ga0316580_10030477
193 Ga0316593_10002372
194 Ga0316593_10005721
195 Ga0316593_10011908
196 Ga0316593_10020843
197 Ga0316593_10022249
198 Ga0316593_10062021
199 Ga0316593_10070360
200 Ga0316588_1010872
201 Ga0316588_1047877
202 Ga0316596_1004392
203 Ga0316596_1006370
204 Ga0316596_1009288
205 Ga0316596_1011980
206 Ga0316596_1014978
207 Ga0316596_1021348
208 Ga0316596_1026283
209 Ga0316596_1047130
210 Ga0316596_1049360
211 Ga0316596_1051318
212 Ga0373951_0022151
213 Ga0316574_0000237
214 Ga0316574_0006944
215 Ga0316574_0007821
216 Ga0316574_0018125
217 Ga0316574_0215363
218 Ga0316582_0011915
219 Ga0316582_0026450
220 Ga0316582_0046713
221 Ga0316582_0047701
222 Ga0316582_0136040
223 Ga0316582_0139310
224 Ga0316582_0145064
225 Ga0316582_0149351
226 Ga0316582_0175617
227 Ga0316582_0294989
228 Ga0316582_0374221
229 Ga0316584_0000700
230 Ga0316584_0003841
231 Ga0316584_0023000
232 Ga0316584_0024019
233 Ga0316584_0027714
234 Ga0316584_0068723
235 Ga0316584_0072137
236 Ga0316584_0076638
237 Ga0316584_0109843
238 Ga0316584_0151913
239 Ga0316581_0001301
240 Ga0400484_03212
241 Ga0400484_21344
242 Ga0400490_03588
243 Ga0400490_32210
244 Ga0400490_35109
245 Ga0400490_37139
246 Ga0400491_02539
247 Ga0400491_13864
248 Ga0400485_02045
249 Ga0400485_06211
250 Ga0400485_06555
251 Ga0400485_10030
252 Ga0400485_19199
253 Ga0400488_10169
254 Ga0400488_11757
255 Ga0400488_31787
256 Ga0400488_37362
257 Ga0400488_38676
258 Ga0400486_03375
259 Ga0400486_05265
260 Ga0400486_14001
261 Ga0400486_17803
262 Ga0400486_22641
263 Ga0400486_22976
264 Ga0400483_014335
265 Ga0400483_059416
266 Ga0400483_059995
267 Ga0400483_115138
268 Ga0400483_117247
269 Ga0400483_145723
270 Ga0400483_199054
271 Ga0400483_202262
272 Ga0400483_207829
273 Ga0400483_208358
274 Ga0400483_242607
275 Ga0400483_266432
276 Ga0400489_03049
277 Ga0400489_20945
278 Ga0400489_28764
279 Ga0400489_66913
280 Ga0400489_82117
281 Ga0400489_83876
282 Ga0400489_90203
283 Ga0400487_06228
284 Ga0400487_09552
285 Ga0400487_09880
286 Ga0400487_21303
287 Ga0451577_0003510
288 Ga0451577_0008141
289 Ga0451577_0013407
290 Ga0451577_0086146
291 Ga0451577_0365290
292 Ga0453683_0177810
293 Ga0453684_0002307
294 Ga0453684_0003023
295 Ga0453684_0029438
296 Ga0453684_0094286
297 Ga0453684_0098524
298 Ga0453684_0147194
299 Ga0453684_0190332
300 Ga0453684_0507830
301 Ga0451576_0033188
302 Ga0501034_0004430
303 2585299658
304 2740990453

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00766

ETF_alpha

Electron transfer flavoprotein FAD-binding domain

202

282

0.98

PF01012

ETF

Electron transfer flavoprotein domain

5

181

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o95-assembly1.cif.gz_F ternary complex between trimethylamine dehydrogenase and electron transferring flavoprotein 0.9431 2 188
1o95-assembly1.cif.gz_F ternary complex between trimethylamine dehydrogenase and electron transferring flavoprotein 0.9288 2 188
3ih5-assembly1.cif.gz_B crystal structure of electron transfer flavoprotein alpha-subunit from bacteroides thetaiotaomicron 0.8359 1 191
3cls-assembly1.cif.gz_D crystal structure of the r236c mutant of etf from methylophilus methylotrophus 0.8051 2 315
3clr-assembly1.cif.gz_D crystal structure of the r236a etf mutant from m. methylotrophus 0.8047 2 314
ID Description Score Start End Superfamily
af_P77378_184_312_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9662 193 314 3.40.50.1220
1o97D02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9652 193 315 3.40.50.1220
af_Q46907_159_286_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9483 197 314 3.40.50.1220
1o97D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9435 2 188 3.40.50.620
1o97D02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9355 193 315 3.40.50.1220
ID Description Score Start End GO Terms
AF-A0A645JL13-F1-model_v4 Electron transfer flavoprotein subunit alpha 0.9822 223 314 GO:0009055
GO:0033539
GO:0050660
AF-A0A800HBP4-F1-model_v4 Electron transfer flavoprotein subunit alpha/FixB family protein 0.9776 220 314 GO:0009055
GO:0033539
GO:0050660
AF-A0A257V656-F1-model_v4 Electron transfer flavoprotein subunit alpha 0.9759 227 314 GO:0009055
GO:0033539
GO:0050660
AF-T0XXZ4-F1-model_v4 Electron transfer flavoprotein alpha subunit 0.9757 198 314 GO:0009055
GO:0033539
GO:0050660
AF-A0A2V6VSR4-F1-model_v4 Electron transfer flavoprotein subunit alpha 0.9749 222 314 GO:0009055
GO:0033539
GO:0050660

Map