F214804

General Info

Members Datasets Scaffolds Average Seq Length
152 127 304 513

Family's Representative Sequence

Representative Sequence 3300032002|Ga0307416_100021511|Ga0307416_1000215112
Length 567
Sequence VIRAPERRPATGSGADAVAFRPGPWRVRPSWTRLIPPTNPGACAITPPDTDAPSTARSSTGAGEVAVRLRGIGKRFPGVIANHDIDIDVRAGTVHAIVGENGAGKSTLMKILYGVQKPDEGTIEINGQRAAMSSPADAIKLGVGMVFQHFMLADNLTVLENVVLGAEKMHGIGEKARDKVEEISRTYGFDLHPDELVEGLGVGERQRVEILKVLYRGAKVIILDEPTAVLVPQEVDALFANLRELKKVGHTLIFISHKLDEVLAVADDITVVRRGTTVAAVQPAEVTSHELAELMVGSELPSPNTEESTVTDTEMLEVSGVTLTDAGGRKLLDDVSLKIHRGEVLGIAGVEGNGQTELTEVLMGMRHPSAGRVELADSDITGWSTKRRRESGIGYIPEDRQRHGLLLDAPLWENRILGHQTREPSVKGWWLNRGGARRDSERIVEGYDVRTPSVDTTARALSGGNQQKFIVGREMSGDPVLLVASHPTRGVDVGAQAAIWDHIREARRRGLAVLLISADLDELIGLSDSIKVILRGRIVGDFDPQDVTPQELGSAMTGAAAAAKEDH

Samples

Sample ID Description Type Environment
1 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
5 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
6 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
7 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
12 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
13 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
14 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
15 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
16 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
19 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
22 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
23 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
24 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
25 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
45 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
46 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
47 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
48 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
49 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
50 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
53 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
54 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
55 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
56 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
57 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
58 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
59 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
60 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
61 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
62 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
63 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
64 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
65 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
66 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
67 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
68 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
69 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
70 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
71 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
78 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
79 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
80 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
81 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
82 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
83 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
84 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
89 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
90 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
91 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
92 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
96 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
97 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
98 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
99 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
100 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
101 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
103 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
104 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
105 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
106 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
107 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
108 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
109 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
110 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
111 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
112 2643221615 Nocardioides sp. Root224 Isolate Unclassified
113 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
114 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
115 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
116 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
117 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
118 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
119 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
120 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
121 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
122 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
123 2891562705 Microbispora tritici MT50 Isolate Unclassified
124 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
125 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
126 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
127 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.82
Metatranscriptomes 0
Isolates 11.18

Biome Distribution

Category Percentage (%)
Aerial Root 1.32
Bulb 0
Endosphere 5.92
Nodule 0
Rhizoplane 12.5
Rhizosphere 62.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307416_100021511 3300032002 Bacteria 4633
2 LJQas_1003177 3300000549 Bacteria 2218
3 Ga0070668_100000998 3300005347 Bacteria 19831
4 Ga0070710_10000855 3300005437 Bacteria 14611
5 Ga0068852_100016493 3300005616 Bacteria 5763
6 Ga0068864_100198108 3300005618 Bacteria 1844
7 Ga0068861_100039369 3300005719 Bacteria 3527
8 Ga0081455_10000082 3300005937 Bacteria 103704
9 Ga0081455_10002158 3300005937 Bacteria 23486
10 Ga0081540_1017051 3300005983 Bacteria 4514
11 Ga0081539_10031611 3300005985 Bacteria 3259
12 Ga0075368_10011486 3300006042 Bacteria 3222
13 Ga0075363_100011029 3300006048 Bacteria 4314
14 Ga0075364_10003647 3300006051 Bacteria 8781
15 Ga0075434_100007135 3300006871 Bacteria 10326
16 Ga0075436_100036653 3300006914 Bacteria 3386
17 Ga0075435_100031460 3300007076 Bacteria 4181
18 Ga0105245_10006652 3300009098 Bacteria 10146
19 Ga0105245_10034504 3300009098 Bacteria 4488
20 Ga0105245_10099364 3300009098 Bacteria 2690
21 Ga0105247_10001021 3300009101 Bacteria 21079
22 Ga0105249_10000691 3300009553 Bacteria 30665
23 Ga0105239_10017953 3300010375 Bacteria 7824
24 Ga0157374_10012051 3300013296 Bacteria 7506
25 Ga0157375_10029648 3300013308 Bacteria 5149
26 Ga0157379_10135534 3300014968 Bacteria 2218
27 Ga0163161_10001904 3300017792 Bacteria 15238
28 Ga0207692_10000336 3300025898 Bacteria 16286
29 Ga0207642_10034746 3300025899 Bacteria 2147
30 Ga0207710_10000813 3300025900 Bacteria 16912
31 Ga0207688_10002776 3300025901 Bacteria 9495
32 Ga0207688_10072656 3300025901 Bacteria 1954
33 Ga0207647_10084136 3300025904 Bacteria 1904
34 Ga0207699_10027226 3300025906 Bacteria 3162
35 Ga0207671_10051036 3300025914 Bacteria 3064
36 Ga0207657_10020896 3300025919 Bacteria 6178
37 Ga0207687_10005700 3300025927 Bacteria 8237
38 Ga0207687_10009106 3300025927 Bacteria 6491
39 Ga0207700_10024350 3300025928 Bacteria 4189
40 Ga0207664_10035745 3300025929 Bacteria 3835
41 Ga0207690_10003456 3300025932 Bacteria 9424
42 Ga0207706_10004054 3300025933 Bacteria 13855
43 Ga0207665_10001613 3300025939 Bacteria 15217
44 Ga0207679_10017349 3300025945 Bacteria 4800
45 Ga0207712_10004633 3300025961 Bacteria 8684
46 Ga0207708_10000029 3300026075 Bacteria 161861
47 Ga0207675_100022862 3300026118 Bacteria 5817
48 Ga0207698_10011159 3300026142 Bacteria 5812
49 Ga0207698_10011178 3300026142 Bacteria 5807
50 Ga0209813_10001425 3300027866 Bacteria 5406
51 Ga0307511_10000068 3300030521 Bacteria 85766
52 Ga0316177_1207831 3300030731 Bacteria 2985
53 Ga0307513_10082983 3300031456 Bacteria 3297
54 Ga0307518_10000691 3300031838 Bacteria 25366
55 Ga0307410_10052994 3300031852 Bacteria 2743
56 Ga0307410_10089057 3300031852 Bacteria 2186
57 Ga0307407_10009772 3300031903 Bacteria 4488
58 Ga0307409_100001482 3300031995 Bacteria 11579
59 Ga0307409_100048937 3300031995 Bacteria 3220
60 Ga0307411_10008673 3300032005 Bacteria 5286
61 Ga0307507_10020072 3300033179 Bacteria 7496
62 Ga0307507_10052709 3300033179 Bacteria 3896
63 Ga0373938_0008615 3300034957 Bacteria 1827
64 Ga0373931_0011432 3300035691 Bacteria 4289
65 Ga0436364_0583136 3300037853 Bacteria 2035
66 Ga0395901_0109294 3300038443 Bacteria 2903
67 Ga0400485_21917 3300038735 Bacteria 7998
68 Ga0451793_0310154 3300041452 Bacteria 7021
69 Ga0451797_0975337 3300041453 Bacteria 3631
70 Ga0451837_0082516 3300041494 Bacteria 3654
71 Ga0451843_1496223 3300041509 Bacteria 8108
72 Ga0451853_1012498 3300041512 Bacteria 3464
73 Ga0466969_0001566 3300044656 Bacteria 12258
74 Ga0466972_0005697 3300044658 Bacteria 6244
75 Ga0466972_0013455 3300044658 Bacteria 4108
76 Ga0466972_0018705 3300044658 Bacteria 3464
77 Ga0466965_0011291 3300044683 Bacteria 4183
78 Ga0466965_0013504 3300044683 Bacteria 3854
79 Ga0466965_0016695 3300044683 Bacteria 3498
80 Ga0466965_0057240 3300044683 Bacteria 1942
81 Ga0466966_0002535 3300044684 Bacteria 11959
82 Ga0466961_0005258 3300044693 Bacteria 8147
83 Ga0466963_0020616 3300044694 Bacteria 4145
84 Ga0466968_0003310 3300044735 Bacteria 5943
85 Ga0466970_0002833 3300044765 Bacteria 8376
86 Ga0466970_0016364 3300044765 Bacteria 3821
87 Ga0466957_0003792 3300044842 Bacteria 8352
88 Ga0466960_0004499 3300044901 Bacteria 5458
89 Ga0466959_0006446 3300045049 Bacteria 8125
90 Ga0466958_0001135 3300045836 Bacteria 12318
91 Ga0466967_0042029 3300045976 Bacteria 3947
92 Ga0466967_0130658 3300045976 Bacteria 2331
93 Ga0466967_0224715 3300045976 Bacteria 1785
94 Ga0496101_0006007 3300048904 Bacteria 7787
95 Ga0496102_0000023 3300048905 Bacteria 237015
96 Ga0496102_0013527 3300048905 Bacteria 7070
97 Ga0496103_0000383 3300048906 Bacteria 39643
98 Ga0496103_0019101 3300048906 Bacteria 4115
99 Ga0496103_0056188 3300048906 Bacteria 2443
100 Ga0496105_0098068 3300048908 Bacteria 2420
101 Ga0496106_0005069 3300048909 Bacteria 9753
102 Ga0496108_0099617 3300048911 Bacteria 2477
103 Ga0496109_0052158 3300048912 Bacteria 3727
104 Ga0496109_0098212 3300048912 Bacteria 2715
105 Ga0496110_0123840 3300048913 Bacteria 2331
106 Ga0496110_0345241 3300048913 Bacteria 1356
107 Ga0496112_0088372 3300048915 Bacteria 3067
108 Ga0496113_0072344 3300048916 Bacteria 2624
109 Ga0496114_0041458 3300048917 Bacteria 3815
110 Ga0496114_0059902 3300048917 Bacteria 3181
111 Ga0496118_0010873 3300048921 Bacteria 8955
112 Ga0496119_0041736 3300048922 Bacteria 2917
113 Ga0496122_0115076 3300048925 Bacteria 1753
114 Ga0496123_0032896 3300048926 Bacteria 3743
115 Ga0501031_0020769 3300049568 Bacteria 4281
116 Ga0501038_0013347 3300049574 Bacteria 7490
117 Ga0501042_0001600 3300049578 Bacteria 13468
118 Ga0501068_0021758 3300049584 Bacteria 3748
119 Ga0501070_0099454 3300049586 Bacteria 2406
120 Ga0501070_0100729 3300049586 Bacteria 2390
121 Ga0501071_0001173 3300049587 Bacteria 14721
122 Ga0501072_0006206 3300049588 Bacteria 9102
123 Ga0501073_0012047 3300049589 Bacteria 6314
124 Ga0501081_0023916 3300049743 Bacteria 4099
125 Ga0501035_0050551 3300049822 Bacteria 3725
126 Ga0501045_0023095 3300049824 Bacteria 4456
127 nmdc:mga00v17_2877_c1 3300050491 Bacteria 8820
128 nmdc:mga00v17_6160_c1 3300050491 Bacteria 6358
129 nmdc:mga04h51_1370_c1 3300050495 Bacteria 5608
130 nmdc:mga0n895_62422_c1 3300050512 Bacteria 3683
131 nmdc:mga08x19_30649_c1 3300050514 Bacteria 3380
132 Ga0500641_0007296 3300053096 Bacteria 3941
133 Ga0500620_016099 3300053155 Bacteria 2130
134 Ga0501084_0012437 3300054114 Bacteria 7053
135 Ga0501082_0033909 3300060353 Bacteria 4403
136 2586064339 2585427649 Bacteria 9053857
137 2644090438 2643221615 Bacteria 5487866
138 2644323434 2643221657 Bacteria 5490246
139 2644456092 2643221681 Bacteria 3707866
140 2644538398 2643221697 Bacteria 3575694
141 2645723662 2643221962 Bacteria 3874254
142 2791915859 2791354901 Bacteria 8322202
143 2809586412 2808606522 Bacteria 9488490
144 2812375661 2811994882 Bacteria 4688362
145 2819690262 2818991462 Bacteria 4320267
146 2856745265 2856741275 Bacteria 8096094
147 2857483879 2857481737 Bacteria 4761446
148 2891567175 2891562705 Bacteria 8039471
149 2915775922 2915768154 Bacteria 8424322
150 2984579805 2984576629 Bacteria 4248407
151 2990257411 2990256926 Bacteria 4252839
152 8003323240 8003314358 Bacteria 10575343
153 Ga0307416_100021511
154 LJQas_1003177
155 Ga0070668_100000998
156 Ga0070710_10000855
157 Ga0068852_100016493
158 Ga0068864_100198108
159 Ga0068861_100039369
160 Ga0081455_10000082
161 Ga0081455_10002158
162 Ga0081540_1017051
163 Ga0081539_10031611
164 Ga0075368_10011486
165 Ga0075363_100011029
166 Ga0075364_10003647
167 Ga0075434_100007135
168 Ga0075436_100036653
169 Ga0075435_100031460
170 Ga0105245_10006652
171 Ga0105245_10034504
172 Ga0105245_10099364
173 Ga0105247_10001021
174 Ga0105249_10000691
175 Ga0105239_10017953
176 Ga0157374_10012051
177 Ga0157375_10029648
178 Ga0157379_10135534
179 Ga0163161_10001904
180 Ga0207692_10000336
181 Ga0207642_10034746
182 Ga0207710_10000813
183 Ga0207688_10002776
184 Ga0207688_10072656
185 Ga0207647_10084136
186 Ga0207699_10027226
187 Ga0207671_10051036
188 Ga0207657_10020896
189 Ga0207687_10005700
190 Ga0207687_10009106
191 Ga0207700_10024350
192 Ga0207664_10035745
193 Ga0207690_10003456
194 Ga0207706_10004054
195 Ga0207665_10001613
196 Ga0207679_10017349
197 Ga0207712_10004633
198 Ga0207708_10000029
199 Ga0207675_100022862
200 Ga0207698_10011159
201 Ga0207698_10011178
202 Ga0209813_10001425
203 Ga0307511_10000068
204 Ga0316177_1207831
205 Ga0307513_10082983
206 Ga0307518_10000691
207 Ga0307410_10052994
208 Ga0307410_10089057
209 Ga0307407_10009772
210 Ga0307409_100001482
211 Ga0307409_100048937
212 Ga0307411_10008673
213 Ga0307507_10020072
214 Ga0307507_10052709
215 Ga0373938_0008615
216 Ga0373931_0011432
217 Ga0436364_0583136
218 Ga0395901_0109294
219 Ga0400485_21917
220 Ga0451793_0310154
221 Ga0451797_0975337
222 Ga0451837_0082516
223 Ga0451843_1496223
224 Ga0451853_1012498
225 Ga0466969_0001566
226 Ga0466972_0005697
227 Ga0466972_0013455
228 Ga0466972_0018705
229 Ga0466965_0011291
230 Ga0466965_0013504
231 Ga0466965_0016695
232 Ga0466965_0057240
233 Ga0466966_0002535
234 Ga0466961_0005258
235 Ga0466963_0020616
236 Ga0466968_0003310
237 Ga0466970_0002833
238 Ga0466970_0016364
239 Ga0466957_0003792
240 Ga0466960_0004499
241 Ga0466959_0006446
242 Ga0466958_0001135
243 Ga0466967_0042029
244 Ga0466967_0130658
245 Ga0466967_0224715
246 Ga0496101_0006007
247 Ga0496102_0000023
248 Ga0496102_0013527
249 Ga0496103_0000383
250 Ga0496103_0019101
251 Ga0496103_0056188
252 Ga0496105_0098068
253 Ga0496106_0005069
254 Ga0496108_0099617
255 Ga0496109_0052158
256 Ga0496109_0098212
257 Ga0496110_0123840
258 Ga0496110_0345241
259 Ga0496112_0088372
260 Ga0496113_0072344
261 Ga0496114_0041458
262 Ga0496114_0059902
263 Ga0496118_0010873
264 Ga0496119_0041736
265 Ga0496122_0115076
266 Ga0496123_0032896
267 Ga0501031_0020769
268 Ga0501038_0013347
269 Ga0501042_0001600
270 Ga0501068_0021758
271 Ga0501070_0099454
272 Ga0501070_0100729
273 Ga0501071_0001173
274 Ga0501072_0006206
275 Ga0501073_0012047
276 Ga0501081_0023916
277 Ga0501035_0050551
278 Ga0501045_0023095
279 nmdc:mga00v17_2877_c1
280 nmdc:mga00v17_6160_c1
281 nmdc:mga04h51_1370_c1
282 nmdc:mga0n895_62422_c1
283 nmdc:mga08x19_30649_c1
284 Ga0500641_0007296
285 Ga0500620_016099
286 Ga0501084_0012437
287 Ga0501082_0033909
288 2586064339
289 2644090438
290 2644323434
291 2644456092
292 2644538398
293 2645723662
294 2791915859
295 2809586412
296 2812375661
297 2819690262
298 2856745265
299 2857483879
300 2891567175
301 2915775922
302 2984579805
303 2990257411
304 8003323240

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

82

228

0.97

PF00005

ABC_tran

ABC transporter

332

489

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6mit-assembly2.cif.gz_E lptbfgc from enterobacter cloacae 0.9036 20 237
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9025 18 235
5xu1-assembly1.cif.gz_B structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.8986 18 233
5xu1-assembly1.cif.gz_A structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.8965 18 233
4p33-assembly1.cif.gz_A crystal structure of e. coli lptb-e163q in complex with atp-sodium 0.8946 269 509
ID Description Score Start End Superfamily
af_P0AAF3_266_503_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9409 288 507 3.40.50.300
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9381 17 250 3.40.50.300
af_P0AAG8_265_500_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9357 268 505 3.40.50.300
af_P04983_256_497_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9348 268 511 3.40.50.300
af_P77257_8_237_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9327 16 248 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A257SHU1-F1-model_v4 ABC transporter domain-containing protein 0.9611 285 516 GO:0005524
GO:0016887
AF-A0A2T0UCU5-F1-model_v4 Monosaccharide ABC transporter ATP-binding protein (CUT2 family) 0.9607 20 250 GO:0005524
GO:0016887
AF-A0A833G421-F1-model_v4 ATP-binding cassette domain-containing protein 0.9571 16 235 GO:0005524
GO:0016887
AF-A0A703XM93-F1-model_v4 Ribose/galactose/methyl galactoside import ATP-binding protein (EC 7.5.2.11) 0.954 402 510 GO:0005524
GO:0005886
GO:0016887
GO:0043211
AF-A0A257SHU1-F1-model_v4 ABC transporter domain-containing protein 0.9531 285 516 GO:0005524
GO:0016887

Map