F214431

General Info

Members Datasets Scaffolds Average Seq Length
152 115 138 128

Family's Representative Sequence

Representative Sequence 3300025225|Ga0209566_103273|Ga0209566_1032733
Length 123
Sequence MKLERLDHLVLTVENLEATISFYTNVLGMQVVEFGQGRKAQKINLHERGKEFEPKAHTPTPGSADLCFLVSTPLEEVIAHLTQQNTKVEEGPVKRTGALGPICSVYIRDPDGNLIELSNALYA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
3 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
4 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
5 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
6 2818991440 Luteibacter yeojuensis 583 Isolate Unclassified
7 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
8 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
9 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
10 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
11 2914759650 Rhizosphaericola mali Isolate Rhizosphere
12 2917832318 Pseudomonas rhizoryzae RY24 Isolate Unclassified
13 2919125081 Pseudomonas psychrotolerans 1545 Isolate Rhizosphere
14 2984504281 Pseudomonas psychrotolerans SORGH_AS201 Isolate Aerial Root
15 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
16 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
30 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
43 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
58 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
59 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
60 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
61 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
62 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
68 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
69 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
70 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
71 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
72 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
73 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
74 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
75 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
76 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
77 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
78 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
79 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
80 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
81 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
82 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
83 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
84 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
85 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
89 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
90 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
91 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
92 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
93 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
94 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
95 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
101 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
104 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
105 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
106 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
107 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
108 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
109 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
110 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
111 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
112 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
113 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
114 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
115 8016728285 Pseudomonas psychrotolerans SORGH_AS 227 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.79
Metatranscriptomes 0
Isolates 9.21

Biome Distribution

Category Percentage (%)
Aerial Root 0.66
Bulb 0
Endosphere 3.95
Nodule 0
Rhizoplane 7.89
Rhizosphere 78.95
Stem 0
Stem Tuber 0
Unclassified 8.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3035958 2162886007 Bacteria 999
2 JGI25160J50197_1000193 3300003354 Bacteria 51332
3 Ga0065707_10086061 3300005295 Bacteria 5692
4 Ga0070683_100036292 3300005329 Bacteria 4510
5 Ga0070683_100267309 3300005329 Bacteria 1627
6 Ga0070683_100289070 3300005329 Bacteria 1559
7 Ga0070682_100882701 3300005337 Bacteria 733
8 Ga0070682_101152054 3300005337 Unclassified 652
9 Ga0070682_101421535 3300005337 Bacteria 594
10 Ga0070660_100397991 3300005339 Unclassified 1139
11 Ga0070709_10124540 3300005434 Bacteria 1752
12 Ga0070681_10017088 3300005458 Bacteria 7251
13 Ga0070681_10066882 3300005458 Unclassified 3562
14 Ga0070681_10662753 3300005458 Bacteria 959
15 Ga0070679_100220370 3300005530 Unclassified 1858
16 Ga0070679_100853594 3300005530 Bacteria 854
17 Ga0070679_100973012 3300005530 Bacteria 792
18 Ga0070679_101061397 3300005530 Bacteria 754
19 Ga0070684_100401972 3300005535 Bacteria 1263
20 Ga0070684_100441446 3300005535 Bacteria 1202
21 Ga0070684_101517300 3300005535 Bacteria 632
22 Ga0068853_100237341 3300005539 Unclassified 1670
23 Ga0068855_100188987 3300005563 Unclassified 2324
24 Ga0081455_10292185 3300005937 Viruses 1173
25 Ga0081455_10387021 3300005937 Unclassified 975
26 Ga0075436_100169699 3300006914 Bacteria 1540
27 Ga0075435_100167940 3300007076 Bacteria 1850
28 Ga0099795_10044890 3300007788 Bacteria 1587
29 Ga0099795_10334532 3300007788 Bacteria 674
30 Ga0105244_10074052 3300009036 Bacteria 1695
31 Ga0114129_11447357 3300009147 Bacteria 846
32 Ga0105243_10012368 3300009148 Bacteria 6452
33 Ga0105237_11149396 3300009545 Bacteria 783
34 Ga0105239_10255122 3300010375 Bacteria 1970
35 Ga0157373_10535543 3300013100 Bacteria 848
36 Ga0157371_10192311 3300013102 Bacteria 1461
37 Ga0157371_10207935 3300013102 Bacteria 1404
38 Ga0157370_10140283 3300013104 Bacteria 2252
39 Ga0157370_10488130 3300013104 Bacteria 1132
40 Ga0157369_12650314 3300013105 Bacteria 506
41 Ga0157372_10264081 3300013307 Bacteria 1999
42 Ga0157372_10720994 3300013307 Unclassified 1160
43 Ga0157372_10961283 3300013307 Bacteria 990
44 Ga0157372_11348951 3300013307 Bacteria 823
45 Ga0157372_12676612 3300013307 Bacteria 572
46 Ga0157375_10000454 3300013308 Bacteria 37107
47 Ga0157375_10290398 3300013308 Bacteria 1798
48 Ga0209566_103273 3300025225 Bacteria 2554
49 Ga0207426_1000026 3300025302 Bacteria 515228
50 Ga0209257_1053814 3300025304 Bacteria 1124
51 Ga0207699_10111768 3300025906 Bacteria 1752
52 Ga0207705_10380268 3300025909 Bacteria 1090
53 Ga0207707_10451847 3300025912 Unclassified 1099
54 Ga0207660_10179400 3300025917 Unclassified 1644
55 Ga0207660_10348416 3300025917 Bacteria 1187
56 Ga0207657_10013174 3300025919 Bacteria 8119
57 Ga0207652_10033538 3300025921 Bacteria 4323
58 Ga0207652_10132921 3300025921 Unclassified 2220
59 Ga0207690_10173362 3300025932 Unclassified 1618
60 Ga0207709_10024052 3300025935 Bacteria 3474
61 Ga0207661_10346738 3300025944 Bacteria 1339
62 Ga0207661_10634975 3300025944 Unclassified 981
63 Ga0207667_10105630 3300025949 Unclassified 2905
64 Ga0207703_11128981 3300026035 Bacteria 753
65 Ga0207639_10304877 3300026041 Unclassified 1409
66 Ga0207674_10345671 3300026116 Bacteria 1438
67 Ga0307513_10488353 3300031456 Bacteria 950
68 Ga0373941_0115615 3300035115 Bacteria 951
69 Ga0373961_0005204 3300035241 Bacteria 3129
70 Ga0316584_0167800 3300036712 Bacteria 1630
71 Ga0400483_250036 3300039062 Bacteria 396353
72 Ga0466969_0442570 3300044656 Bacteria 591
73 Ga0466963_0010176 3300044694 Bacteria 5687
74 Ga0466964_0071700 3300044706 Bacteria 1466
75 Ga0451576_0621684 3300045051 Bacteria 1135
76 Ga0466967_0122779 3300045976 Bacteria 2402
77 Ga0495627_015024 3300046453 Bacteria 2682
78 Ga0495641_0144197 3300046461 Bacteria 1064
79 Ga0495641_0148106 3300046461 Bacteria 1049
80 Ga0495606_0009905 3300046507 Bacteria 7984
81 Ga0495620_0300670 3300046515 Bacteria 610
82 Ga0495663_0000169 3300046525 Bacteria 26129
83 Ga0495654_0000001 3300046530 Bacteria 1513197
84 Ga0495609_0000543 3300046538 Bacteria 29898
85 Ga0495633_0000109 3300046558 Bacteria 110841
86 Ga0495667_0153340 3300046559 Bacteria 1483
87 Ga0495625_0000963 3300046660 Bacteria 38321
88 Ga0495625_0618997 3300046660 Bacteria 648
89 Ga0495657_0425157 3300046675 Bacteria 780
90 Ga0495660_0098216 3300046810 Bacteria 1511
91 Ga0495686_0000200 3300047472 Bacteria 111089
92 Ga0495686_0004052 3300047472 Bacteria 12238
93 Ga0495686_0462268 3300047472 Bacteria 673
94 Ga0496100_0424310 3300048903 Bacteria 1016
95 Ga0496101_0423030 3300048904 Bacteria 1050
96 Ga0496102_0407881 3300048905 Bacteria 1277
97 Ga0496104_0875602 3300048907 Bacteria 803
98 Ga0496106_1121346 3300048909 Bacteria 616
99 Ga0496107_0342600 3300048910 Bacteria 1112
100 Ga0496108_0609723 3300048911 Bacteria 951
101 Ga0496109_0286367 3300048912 Bacteria 1553
102 Ga0496110_0004186 3300048913 Bacteria 11148
103 Ga0496111_0160707 3300048914 Bacteria 1668
104 Ga0496114_0066572 3300048917 Unclassified 3020
105 Ga0496114_0677059 3300048917 Bacteria 906
106 Ga0496118_0337075 3300048921 Bacteria 810
107 Ga0496122_0001423 3300048925 Bacteria 38750
108 Ga0496124_0000001 3300048927 Bacteria 1747840
109 Ga0496125_0143281 3300048928 Bacteria 1657
110 Ga0501032_0549757 3300049569 Bacteria 736
111 Ga0501032_1029941 3300049569 Unclassified 517
112 Ga0501033_0155999 3300049570 Bacteria 1645
113 Ga0501034_0173109 3300049571 Bacteria 2125
114 Ga0501037_0280781 3300049573 Bacteria 1160
115 Ga0501047_0308978 3300049581 Bacteria 1422
116 Ga0501067_0003880 3300049583 Bacteria 8251
117 Ga0501067_0007099 3300049583 Bacteria 6220
118 Ga0501068_0057459 3300049584 Bacteria 2359
119 Ga0501070_0015721 3300049586 Bacteria 6364
120 Ga0501070_0044144 3300049586 Bacteria 3709
121 Ga0501070_0063907 3300049586 Bacteria 3049
122 Ga0501070_0093443 3300049586 Bacteria 2488
123 Ga0501071_0009983 3300049587 Bacteria 6344
124 Ga0501072_0013213 3300049588 Bacteria 6322
125 Ga0501072_0124493 3300049588 Bacteria 2054
126 Ga0501073_0005215 3300049589 Bacteria 9744
127 Ga0501073_0007364 3300049589 Bacteria 8185
128 Ga0501074_0012352 3300049590 Bacteria 6207
129 Ga0501074_0074842 3300049590 Bacteria 2431
130 Ga0501080_0013529 3300049742 Bacteria 7510
131 Ga0501083_0170552 3300049744 Bacteria 1422
132 Ga0501044_0166730 3300049823 Bacteria 2177
133 Ga0501044_0240842 3300049823 Bacteria 1753
134 Ga0495619_0110649 3300053085 Bacteria 1877
135 Ga0500607_037511 3300053121 Bacteria 2641
136 Ga0500627_0481630 3300053158 Bacteria 519
137 Ga0501084_0018417 3300054114 Bacteria 5814
138 Ga0501082_0453541 3300060353 Bacteria 1120

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300060353 Ga0501082_0453541 Ga0501082_0453541_14_364 116
2 iso_pu_bacteria 2585428187 2588233189 122
3 iso_pu_bacteria 2914759650 2914761455 122
4 3300025225 Ga0209566_103273 Ga0209566_1032733 123
5 iso_pu_bacteria 2690316117 2692318007 123
6 iso_pu_bacteria 2818991440 2819563531 123
7 iso_pu_bacteria 2904463128 2904464158 123
8 iso_pu_bacteria 2917832318 2917834859 123
9 iso_pu_bacteria 2919125081 2919128810 123
10 iso_pu_bacteria 2984504281 2984508093 123
11 iso_pu_bacteria 8016728285 8016729719 123
12 iso_pu_bacteria 2847417321 2847423489 124
13 iso_pu_bacteria 2885526491 2885530955 124
14 iso_pu_bacteria 2904162308 2904166798 124
15 3300003354 JGI25160J50197_1000193 JGI25160J50197_100019335 125
16 3300025302 Ga0207426_1000026 Ga0207426_1000026224 125
17 3300046453 Ga0495627_015024 Ga0495627_015024_229_606 125
18 3300048913 Ga0496110_0004186 Ga0496110_0004186_8178_8555 125
19 3300048914 Ga0496111_0160707 Ga0496111_0160707_151_528 125
20 3300048927 Ga0496124_0000001 Ga0496124_0000001_1197291_1197668 125
21 3300005337 Ga0070682_100882701 Ga0070682_1008827011 126
22 3300005434 Ga0070709_10124540 Ga0070709_101245404 126
23 3300005458 Ga0070681_10017088 Ga0070681_100170886 126
24 3300005530 Ga0070679_100853594 Ga0070679_1008535942 126
25 3300005535 Ga0070684_101517300 Ga0070684_1015173001 126
26 3300006914 Ga0075436_100169699 Ga0075436_1001696992 126
27 3300007076 Ga0075435_100167940 Ga0075435_1001679402 126
28 3300007788 Ga0099795_10044890 Ga0099795_100448902 126
29 3300007788 Ga0099795_10334532 Ga0099795_103345322 126
30 3300009147 Ga0114129_11447357 Ga0114129_114473572 126
31 3300013104 Ga0157370_10488130 Ga0157370_104881303 126
32 3300013307 Ga0157372_10264081 Ga0157372_102640814 126
33 3300013308 Ga0157375_10290398 Ga0157375_102903982 126
34 3300025906 Ga0207699_10111768 Ga0207699_101117682 126
35 3300025917 Ga0207660_10348416 Ga0207660_103484162 126
36 3300035115 Ga0373941_0115615 Ga0373941_0115615_253_633 126
37 3300035241 Ga0373961_0005204 Ga0373961_0005204_1653_2033 126
38 3300036712 Ga0316584_0167800 Ga0316584_0167800_146_526 126
39 3300045051 Ga0451576_0621684 Ga0451576_0621684_478_858 126
40 3300046461 Ga0495641_0144197 Ga0495641_0144197_360_791 126
41 3300046507 Ga0495606_0009905 Ga0495606_0009905_6879_7259 126
42 3300046515 Ga0495620_0300670 Ga0495620_0300670_195_575 126
43 3300046525 Ga0495663_0000169 Ga0495663_0000169_6219_6599 126
44 3300046538 Ga0495609_0000543 Ga0495609_0000543_24427_24807 126
45 3300046559 Ga0495667_0153340 Ga0495667_0153340_420_800 126
46 3300046660 Ga0495625_0000963 Ga0495625_0000963_6153_6533 126
47 3300046810 Ga0495660_0098216 Ga0495660_0098216_475_855 126
48 3300047472 Ga0495686_0000200 Ga0495686_0000200_35350_35730 126
49 3300048904 Ga0496101_0423030 Ga0496101_0423030_291_677 126
50 3300048907 Ga0496104_0875602 Ga0496104_0875602_321_707 126
51 3300048910 Ga0496107_0342600 Ga0496107_0342600_77_463 126
52 3300048912 Ga0496109_0286367 Ga0496109_0286367_526_912 126
53 3300053121 Ga0500607_037511 Ga0500607_037511_196_576 126
54 iso_pu_bacteria 2585428045 2587679843 126
55 iso_pu_bacteria 2588254255 2590600296 126
56 3300005339 Ga0070660_100397991 Ga0070660_1003979912 127
57 3300005458 Ga0070681_10066882 Ga0070681_100668823 127
58 3300005458 Ga0070681_10662753 Ga0070681_106627532 127
59 3300005530 Ga0070679_100220370 Ga0070679_1002203702 127
60 3300005530 Ga0070679_100973012 Ga0070679_1009730121 127
61 3300005530 Ga0070679_101061397 Ga0070679_1010613972 127
62 3300005539 Ga0068853_100237341 Ga0068853_1002373412 127
63 3300005563 Ga0068855_100188987 Ga0068855_1001889874 127
64 3300013100 Ga0157373_10535543 Ga0157373_105355432 127
65 3300013102 Ga0157371_10192311 Ga0157371_101923111 127
66 3300013102 Ga0157371_10207935 Ga0157371_102079352 127
67 3300013307 Ga0157372_10720994 Ga0157372_107209942 127
68 3300013307 Ga0157372_12676612 Ga0157372_126766121 127
69 3300025304 Ga0209257_1053814 Ga0209257_10538142 127
70 3300025909 Ga0207705_10380268 Ga0207705_103802682 127
71 3300025912 Ga0207707_10451847 Ga0207707_104518472 127
72 3300025917 Ga0207660_10179400 Ga0207660_101794001 127
73 3300025919 Ga0207657_10013174 Ga0207657_100131742 127
74 3300025921 Ga0207652_10033538 Ga0207652_100335383 127
75 3300025921 Ga0207652_10132921 Ga0207652_101329212 127
76 3300025932 Ga0207690_10173362 Ga0207690_101733622 127
77 3300025949 Ga0207667_10105630 Ga0207667_101056302 127
78 3300026041 Ga0207639_10304877 Ga0207639_103048772 127
79 3300026116 Ga0207674_10345671 Ga0207674_103456711 127
80 3300031456 Ga0307513_10488353 Ga0307513_104883532 127
81 3300048903 Ga0496100_0424310 Ga0496100_0424310_27_410 127
82 3300048905 Ga0496102_0407881 Ga0496102_0407881_729_1112 127
83 3300048909 Ga0496106_1121346 Ga0496106_1121346_194_577 127
84 3300048911 Ga0496108_0609723 Ga0496108_0609723_30_413 127
85 3300048917 Ga0496114_0677059 Ga0496114_0677059_396_779 127
86 3300049569 Ga0501032_0549757 Ga0501032_0549757_43_426 127
87 3300049570 Ga0501033_0155999 Ga0501033_0155999_557_940 127
88 3300049586 Ga0501070_0063907 Ga0501070_0063907_34_417 127
89 3300049823 Ga0501044_0166730 Ga0501044_0166730_399_782 127
90 3300005329 Ga0070683_100267309 Ga0070683_1002673092 128
91 3300005329 Ga0070683_100289070 Ga0070683_1002890702 128
92 3300005337 Ga0070682_101421535 Ga0070682_1014215352 128
93 3300005535 Ga0070684_100401972 Ga0070684_1004019722 128
94 3300005535 Ga0070684_100441446 Ga0070684_1004414463 128
95 3300005937 Ga0081455_10292185 Ga0081455_102921851 128
96 3300009036 Ga0105244_10074052 Ga0105244_100740522 128
97 3300013105 Ga0157369_12650314 Ga0157369_126503141 128
98 3300013307 Ga0157372_11348951 Ga0157372_113489511 128
99 3300025944 Ga0207661_10346738 Ga0207661_103467382 128
100 3300026035 Ga0207703_11128981 Ga0207703_111289812 128
101 3300039062 Ga0400483_250036 Ga0400483_250036_127008_127394 128
102 3300044694 Ga0466963_0010176 Ga0466963_0010176_1210_1596 128
103 3300044706 Ga0466964_0071700 Ga0466964_0071700_503_889 128
104 3300045976 Ga0466967_0122779 Ga0466967_0122779_1081_1467 128
105 3300046461 Ga0495641_0148106 Ga0495641_0148106_80_466 128
106 3300046558 Ga0495633_0000109 Ga0495633_0000109_44694_45080 128
107 3300046675 Ga0495657_0425157 Ga0495657_0425157_166_552 128
108 3300048917 Ga0496114_0066572 Ga0496114_0066572_2151_2537 128
109 3300049569 Ga0501032_1029941 Ga0501032_1029941_84_470 128
110 3300049571 Ga0501034_0173109 Ga0501034_0173109_546_932 128
111 3300049573 Ga0501037_0280781 Ga0501037_0280781_87_473 128
112 3300049581 Ga0501047_0308978 Ga0501047_0308978_221_607 128
113 3300049583 Ga0501067_0003880 Ga0501067_0003880_1994_2380 128
114 3300049583 Ga0501067_0007099 Ga0501067_0007099_1942_2328 128
115 3300049584 Ga0501068_0057459 Ga0501068_0057459_1195_1581 128
116 3300049586 Ga0501070_0015721 Ga0501070_0015721_1239_1625 128
117 3300049586 Ga0501070_0044144 Ga0501070_0044144_2534_2920 128
118 3300049586 Ga0501070_0093443 Ga0501070_0093443_361_795 128
119 3300049587 Ga0501071_0009983 Ga0501071_0009983_2348_2734 128
120 3300049588 Ga0501072_0013213 Ga0501072_0013213_2712_3098 128
121 3300049588 Ga0501072_0124493 Ga0501072_0124493_904_1338 128
122 3300049589 Ga0501073_0005215 Ga0501073_0005215_3601_3987 128
123 3300049589 Ga0501073_0007364 Ga0501073_0007364_6246_6632 128
124 3300049590 Ga0501074_0012352 Ga0501074_0012352_2513_2899 128
125 3300049590 Ga0501074_0074842 Ga0501074_0074842_771_1157 128
126 3300049742 Ga0501080_0013529 Ga0501080_0013529_3819_4205 128
127 3300049744 Ga0501083_0170552 Ga0501083_0170552_218_604 128
128 3300049823 Ga0501044_0240842 Ga0501044_0240842_920_1306 128
129 3300053085 Ga0495619_0110649 Ga0495619_0110649_265_651 128
130 3300054114 Ga0501084_0018417 Ga0501084_0018417_1164_1550 128
131 3300005937 Ga0081455_10387021 Ga0081455_103870212 129
132 3300013308 Ga0157375_10000454 Ga0157375_1000045415 129
133 3300046530 Ga0495654_0000001 Ga0495654_0000001_908080_908469 129
134 3300047472 Ga0495686_0004052 Ga0495686_0004052_9787_10176 129
135 3300048921 Ga0496118_0337075 Ga0496118_0337075_110_499 129
136 3300048928 Ga0496125_0143281 Ga0496125_0143281_759_1148 129
137 2162886007 SwRhRL2b_contig_3035958 SwRhRL2b_0071.00005580 130
138 3300005295 Ga0065707_10086061 Ga0065707_100860612 130
139 3300005329 Ga0070683_100036292 Ga0070683_1000362925 130
140 3300005337 Ga0070682_101152054 Ga0070682_1011520541 130
141 3300009148 Ga0105243_10012368 Ga0105243_100123687 130
142 3300009545 Ga0105237_11149396 Ga0105237_111493961 130
143 3300010375 Ga0105239_10255122 Ga0105239_102551224 130
144 3300013104 Ga0157370_10140283 Ga0157370_101402832 130
145 3300013307 Ga0157372_10961283 Ga0157372_109612832 130
146 3300025935 Ga0207709_10024052 Ga0207709_100240526 130
147 3300025944 Ga0207661_10634975 Ga0207661_106349751 130
148 3300044656 Ga0466969_0442570 Ga0466969_0442570_177_575 130
149 3300046660 Ga0495625_0618997 Ga0495625_0618997_127_522 130
150 3300047472 Ga0495686_0462268 Ga0495686_0462268_94_489 130
151 3300048925 Ga0496122_0001423 Ga0496122_0001423_35574_35969 130
152 3300053158 Ga0500627_0481630 Ga0500627_0481630_11_406 130

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00903

Glyoxalase

Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

5

117

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zw5-assembly1.cif.gz_B crystal structure of the human glyoxalase domain-containing protein 5 0.917 3 125
3ey7-assembly1.cif.gz_B structure from the mobile metagenome of v. cholerae. integron cassette protein vch_cass1 0.9163 1 125
3ey8-assembly1.cif.gz_A structure from the mobile metagenome of v. pseudocholerae. vpc_cass1 0.9148 1 127
3huh-assembly2.cif.gz_C the structure of biphenyl-2,3-diol 1,2-dioxygenase iii-related protein from salmonella typhimurium 0.9123 2 125
3hnq-assembly1.cif.gz_A crystal structure of virulence protein stm3117 from salmonella typhimurium. northeast structural genomics consortium target id str274 0.9119 1 126
ID Description Score Start End Superfamily
af_A6NK44_39_157_3.10.180.10 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.9411 7 125 3.10.180.10
af_A6NK44_39_157_3.10.180.10 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.9335 7 125 3.10.180.10
af_A0A1D6PZL5_15_277_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7765 23 52 3.40.50.2000
2rbbB00 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.7679 8 126 3.10.180.10
af_Q2FYM3_1_61_3.10.180.10 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.7633 3 56 3.10.180.10
ID Description Score Start End GO Terms
AF-A0A2V7DDC2-F1-model_v4 VOC domain-containing protein 0.9974 72 125
AF-A0A357NRA2-F1-model_v4 deleted 0.992 72 127
AF-A0A357NRA2-F1-model_v4 deleted 0.9748 72 127
AF-A0A2V7DDM7-F1-model_v4 VOC family virulence protein 0.9686 63 125
AF-A0A5E8XM96-F1-model_v4 deleted 0.9675 69 127

Feature Viewer

pLDDT pTM Quality
90.63 0.84 High
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Predicted Structure (AlphaFold2)

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