F214114

General Info

Members Datasets Scaffolds Average Seq Length
152 101 151 291

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10002694|Ga0105240_1000269419
Length 332
Sequence MILSAHSLASGKFTVFSSICAVLENKPRSIFERKRSNFIAMAQETNSKNAPLAYQVFTSTRPGLNRDPNTPPGLDDLKWVPNSATLVYGKKDAVLVDTFLAIEHTNALIDSVAATGKDLKYIYITHPHGDHFYGLQLVLDRWPDAIAIASPAVAKDCAEQVRPEVISSFWAPRFPGQIPERLAVPRAMESDEFELEGERLVVLQTGFSDTHDSTSLYVPSIGLIVAGDVAYNGVHPYLAETTPATRKEWRNALDMLANLQPKWVVAGHKQPSFADDPAILAATRKYLEDFDRLDAATTTNLELYNSMLALYPDRANPGSLWGGSLAAKKIIR

Samples

Sample ID Description Type Environment
1 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
6 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
45 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
46 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
47 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
62 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
67 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
68 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
71 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
72 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
77 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
78 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
79 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
80 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
81 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
82 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
83 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
84 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
85 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
86 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
87 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
88 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
89 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
90 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
91 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
92 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
93 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
94 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
97 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
98 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
99 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
100 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
101 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.34
Metatranscriptomes 0
Isolates 0.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.24
Nodule 0
Rhizoplane 1.97
Rhizosphere 80.92
Stem 0
Stem Tuber 0
Unclassified 9.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1003157 3300002987 Bacteria 5930
2 rootH2_10006617 3300003320 Bacteria 52484
3 rootH2_10006838 3300003320 Bacteria 63494
4 rootH2_10013921 3300003320 Bacteria 24800
5 rootL2_10013561 3300003322 Bacteria 11797
6 rootL2_10052057 3300003322 Bacteria 9446
7 JGI25160J50197_1000053 3300003354 Bacteria 127632
8 JGI25161J50226_1000039 3300003374 Bacteria 127632
9 Ga0055543_1000015 3300004625 Bacteria 177197
10 Ga0065165_1000568 3300005262 Bacteria 54881
11 Ga0065704_10223390 3300005289 Archaea 1066
12 Ga0065707_10178058 3300005295 Unclassified 1424
13 Ga0070709_10203656 3300005434 Unclassified 1403
14 Ga0070710_10065288 3300005437 Bacteria 2084
15 Ga0070711_100118655 3300005439 Bacteria 1953
16 Ga0070708_100063872 3300005445 Unclassified 3297
17 Ga0070708_100443883 3300005445 Bacteria 1224
18 Ga0070706_100210965 3300005467 Bacteria 1814
19 Ga0070706_100242515 3300005467 Bacteria 1683
20 Ga0070706_100286835 3300005467 Bacteria 1536
21 Ga0070706_100308906 3300005467 Bacteria 1475
22 Ga0070707_100033748 3300005468 Bacteria 4879
23 Ga0070698_100091168 3300005471 Bacteria 3031
24 Ga0070698_100130069 3300005471 Unclassified 2473
25 Ga0070698_100300357 3300005471 Bacteria 1536
26 Ga0070699_100013252 3300005518 Bacteria 7109
27 Ga0070699_100046739 3300005518 Bacteria 3745
28 Ga0070699_100107439 3300005518 Unclassified 2448
29 Ga0070697_100246176 3300005536 Bacteria 1528
30 Ga0068855_100021407 3300005563 Bacteria 7753
31 Ga0068856_100033204 3300005614 Bacteria 5053
32 Ga0068864_100203024 3300005618 Bacteria 1822
33 Ga0068862_100211662 3300005844 Bacteria 1752
34 Ga0081539_10023355 3300005985 Bacteria 4052
35 Ga0075432_10004723 3300006058 Unclassified 4638
36 Ga0070712_100074415 3300006175 Unclassified 2440
37 Ga0070712_100161276 3300006175 Bacteria 1732
38 Ga0075428_100009715 3300006844 Bacteria 10685
39 Ga0075428_100038060 3300006844 Bacteria 5294
40 Ga0075430_100087408 3300006846 Bacteria 2609
41 Ga0075430_100117808 3300006846 Unclassified 2214
42 Ga0075430_100342000 3300006846 Bacteria 1236
43 Ga0075431_100041204 3300006847 Bacteria 4761
44 Ga0075429_100022954 3300006880 Bacteria 5409
45 Ga0075435_100066935 3300007076 Unclassified 2924
46 Ga0099794_10000068 3300007265 Bacteria 38645
47 Ga0099794_10000977 3300007265 Bacteria 9638
48 Ga0099794_10117934 3300007265 Unclassified 1333
49 Ga0105240_10000119 3300009093 Bacteria 163675
50 Ga0105240_10000195 3300009093 Bacteria 123313
51 Ga0105240_10002694 3300009093 Bacteria 28270
52 Ga0105240_10010151 3300009093 Bacteria 13258
53 Ga0105240_10155469 3300009093 Bacteria 2721
54 Ga0105247_10030394 3300009101 Bacteria 3274
55 Ga0114129_10752746 3300009147 Unclassified 1247
56 Ga0105241_10014760 3300009174 Bacteria 5718
57 Ga0105241_10237746 3300009174 Bacteria 1538
58 Ga0105248_10069642 3300009177 Bacteria 3950
59 Ga0105237_10003977 3300009545 Bacteria 17278
60 Ga0105237_10022054 3300009545 Bacteria 6537
61 Ga0105237_10041961 3300009545 Bacteria 4613
62 Ga0105238_10109636 3300009551 Unclassified 2742
63 Ga0105238_10260809 3300009551 Bacteria 1712
64 Ga0105239_10001075 3300010375 Bacteria 37971
65 Ga0157374_10000001 3300013296 Bacteria 1077351
66 Ga0163162_10363776 3300013306 Bacteria 1579
67 Ga0157372_10000994 3300013307 Bacteria 30998
68 Ga0157372_10109645 3300013307 Unclassified 3161
69 Ga0163163_10041730 3300014325 Bacteria 4488
70 Ga0163163_10096424 3300014325 Bacteria 2977
71 Ga0157376_10426053 3300014969 Unclassified 1289
72 Ga0209436_118014 3300025208 Bacteria 1016
73 Ga0209130_1000038 3300025284 Bacteria 264226
74 Ga0207426_1000081 3300025302 Bacteria 304502
75 Ga0207684_10237205 3300025910 Bacteria 1573
76 Ga0207654_10006078 3300025911 Bacteria 6065
77 Ga0207695_10000023 3300025913 Bacteria 657903
78 Ga0207695_10000139 3300025913 Bacteria 216873
79 Ga0207695_10000184 3300025913 Bacteria 181201
80 Ga0207695_10000456 3300025913 Bacteria 89131
81 Ga0207695_10111040 3300025913 Bacteria 2721
82 Ga0207671_10009162 3300025914 Bacteria 8306
83 Ga0207671_10022193 3300025914 Bacteria 4802
84 Ga0207671_10031441 3300025914 Unclassified 3956
85 Ga0207693_10077069 3300025915 Unclassified 2611
86 Ga0207693_10223113 3300025915 Bacteria 1480
87 Ga0207663_10244518 3300025916 Bacteria 1318
88 Ga0207646_10014103 3300025922 Bacteria 7600
89 Ga0207646_10440712 3300025922 Bacteria 1175
90 Ga0207646_10486406 3300025922 Bacteria 1112
91 Ga0207646_10606101 3300025922 Unclassified 983
92 Ga0207694_10229439 3300025924 Bacteria 1516
93 Ga0207711_10578720 3300025941 Unclassified 1047
94 Ga0207667_10040475 3300025949 Unclassified 4963
95 Ga0207702_10012632 3300026078 Bacteria 7030
96 Ga0207641_10137891 3300026088 Unclassified 2197
97 Ga0207641_10305200 3300026088 Bacteria 1505
98 Ga0209588_1001723 3300027671 Bacteria 5781
99 Ga0207428_10000225 3300027907 Archaea 78396
100 Ga0373936_0012772 3300035113 Bacteria 3200
101 Ga0395900_0010394 3300037418 Bacteria 9516
102 Ga0395905_0004789 3300037471 Bacteria 13978
103 Ga0436364_0348020 3300037853 Bacteria 4625
104 Ga0436364_0539893 3300037853 Unclassified 2398
105 Ga0436363_0487962 3300039450 Bacteria 1034
106 Ga0436363_1134742 3300039450 Bacteria 2623
107 Ga0453683_0005760 3300044673 Bacteria 8591
108 Ga0466965_0066784 3300044683 Bacteria 1804
109 Ga0466966_0250719 3300044684 Bacteria 1066
110 Ga0466963_0111515 3300044694 Bacteria 1878
111 Ga0466964_0112837 3300044706 Bacteria 1215
112 Ga0466964_0124668 3300044706 Bacteria 1165
113 Ga0466968_0010132 3300044735 Bacteria 3645
114 Ga0466960_0080728 3300044901 Bacteria 1638
115 Ga0466959_0045717 3300045049 Bacteria 3224
116 Ga0451576_0004970 3300045051 Bacteria 16920
117 Ga0466958_0189784 3300045836 Bacteria 1306
118 Ga0466967_0059142 3300045976 Bacteria 3391
119 Ga0466967_0078359 3300045976 Bacteria 2976
120 Ga0466967_0213585 3300045976 Bacteria 1831
121 Ga0466967_0224858 3300045976 Bacteria 1785
122 Ga0495629_0162964 3300046459 Bacteria 1549
123 Ga0495606_0027682 3300046507 Bacteria 4013
124 Ga0495643_0022912 3300046522 Bacteria 3555
125 Ga0495686_0000004 3300047472 Bacteria 869019
126 Ga0495686_0000098 3300047472 Bacteria 183131
127 Ga0495686_0147820 3300047472 Bacteria 1382
128 Ga0496104_0185055 3300048907 Bacteria 1994
129 Ga0496112_0007099 3300048915 Bacteria 9903
130 Ga0496112_0079646 3300048915 Bacteria 3240
131 Ga0496116_0232076 3300048919 Bacteria 935
132 Ga0496119_0042724 3300048922 Bacteria 2872
133 Ga0496120_0115906 3300048923 Bacteria 1392
134 Ga0496120_0150611 3300048923 Bacteria 1170
135 Ga0496121_0014859 3300048924 Bacteria 8214
136 Ga0496126_0162983 3300048929 Bacteria 1904
137 nmdc:mga05p37_41981_c1 3300050507 Bacteria 5619
138 nmdc:mga09592_12781_c1 3300050508 Bacteria 6843
139 nmdc:mga0qj67_188283_c1 3300050509 Bacteria 1677
140 nmdc:mga06r32_58720_c1 3300050510 Bacteria 3698
141 nmdc:mga08y16_1099_c1 3300050511 Archaea 26635
142 nmdc:mga0n895_2258_c1 3300050512 Archaea 14927
143 nmdc:mga0n895_448304_c1 3300050512 Unclassified 1303
144 nmdc:mga0n895_9638_c1 3300050512 Bacteria 8463
145 nmdc:mga0rr50_21084_c1 3300050513 Bacteria 4441
146 nmdc:mga0rr50_63996_c1 3300050513 Unclassified 2780
147 nmdc:mga08x19_50440_c1 3300050514 Bacteria 2671
148 nmdc:mga0a205_4858_c1 3300050515 Bacteria 11115
149 Ga0500616_0004127 3300053153 Bacteria 10518
150 Ga0500637_0195309 3300053178 Bacteria 1155
151 Ga0500645_007457 3300053730 Bacteria 3807

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025922 Ga0207646_10606101 Ga0207646_106061012 231
2 3300050512 nmdc:mga0n895_9638_c1 nmdc:mga0n895_9638_c1_6771_7520 248
3 3300050513 nmdc:mga0rr50_21084_c1 nmdc:mga0rr50_21084_c1_2702_3451 248
4 3300050514 nmdc:mga08x19_50440_c1 nmdc:mga08x19_50440_c1_149_898 248
5 3300050515 nmdc:mga0a205_4858_c1 nmdc:mga0a205_4858_c1_4443_5192 248
6 3300044694 Ga0466963_0111515 Ga0466963_0111515_849_1724 260
7 3300045836 Ga0466958_0189784 Ga0466958_0189784_310_1185 260
8 3300045976 Ga0466967_0224858 Ga0466967_0224858_309_1184 260
9 3300006846 Ga0075430_100342000 Ga0075430_1003420002 272
10 3300053730 Ga0500645_007457 Ga0500645_007457_2142_3014 273
11 iso_pu_bacteria 8003870546 8003871822 274
12 3300005518 Ga0070699_100107439 Ga0070699_1001074393 275
13 3300007265 Ga0099794_10117934 Ga0099794_101179341 276
14 3300044684 Ga0466966_0250719 Ga0466966_0250719_169_1041 277
15 3300044706 Ga0466964_0112837 Ga0466964_0112837_89_961 277
16 3300045049 Ga0466959_0045717 Ga0466959_0045717_1163_2035 277
17 3300045976 Ga0466967_0213585 Ga0466967_0213585_685_1557 277
18 3300005467 Ga0070706_100286835 Ga0070706_1002868351 278
19 3300005471 Ga0070698_100300357 Ga0070698_1003003571 278
20 3300009093 Ga0105240_10000195 Ga0105240_1000019539 278
21 3300025910 Ga0207684_10237205 Ga0207684_102372052 278
22 3300025913 Ga0207695_10000023 Ga0207695_1000002375 278
23 3300003322 rootL2_10052057 rootL2_100520579 280
24 3300037853 Ga0436364_0348020 Ga0436364_0348020_979_1839 280
25 3300046459 Ga0495629_0162964 Ga0495629_0162964_429_1271 280
26 3300005434 Ga0070709_10203656 Ga0070709_102036562 281
27 3300037853 Ga0436364_0539893 Ga0436364_0539893_620_1483 281
28 3300005518 Ga0070699_100046739 Ga0070699_1000467393 282
29 3300005536 Ga0070697_100246176 Ga0070697_1002461762 282
30 3300005844 Ga0068862_100211662 Ga0068862_1002116621 282
31 3300009093 Ga0105240_10010151 Ga0105240_1001015110 282
32 3300025913 Ga0207695_10000456 Ga0207695_1000045632 282
33 3300026088 Ga0207641_10305200 Ga0207641_103052002 282
34 3300039450 Ga0436363_0487962 Ga0436363_0487962_97_948 282
35 3300045976 Ga0466967_0078359 Ga0466967_0078359_1300_2175 282
36 3300005445 Ga0070708_100443883 Ga0070708_1004438832 283
37 3300007265 Ga0099794_10000977 Ga0099794_100009774 283
38 3300009147 Ga0114129_10752746 Ga0114129_107527462 283
39 3300025922 Ga0207646_10440712 Ga0207646_104407121 283
40 3300027671 Ga0209588_1001723 Ga0209588_10017237 283
41 3300005985 Ga0081539_10023355 Ga0081539_100233555 284
42 3300037418 Ga0395900_0010394 Ga0395900_0010394_3319_4197 284
43 3300037471 Ga0395905_0004789 Ga0395905_0004789_8848_9726 284
44 3300006844 Ga0075428_100009715 Ga0075428_10000971514 285
45 3300006846 Ga0075430_100087408 Ga0075430_1000874083 285
46 3300025922 Ga0207646_10486406 Ga0207646_104864061 285
47 3300050509 nmdc:mga0qj67_188283_c1 nmdc:mga0qj67_188283_c1_81_983 285
48 3300050512 nmdc:mga0n895_448304_c1 nmdc:mga0n895_448304_c1_340_1224 285
49 3300005289 Ga0065704_10223390 Ga0065704_102233901 286
50 3300005295 Ga0065707_10178058 Ga0065707_101780582 286
51 3300005437 Ga0070710_10065288 Ga0070710_100652882 286
52 3300005439 Ga0070711_100118655 Ga0070711_1001186552 286
53 3300005467 Ga0070706_100210965 Ga0070706_1002109652 286
54 3300005467 Ga0070706_100242515 Ga0070706_1002425152 286
55 3300005471 Ga0070698_100130069 Ga0070698_1001300693 286
56 3300005618 Ga0068864_100203024 Ga0068864_1002030242 286
57 3300006058 Ga0075432_10004723 Ga0075432_100047231 286
58 3300006175 Ga0070712_100074415 Ga0070712_1000744152 286
59 3300006175 Ga0070712_100161276 Ga0070712_1001612762 286
60 3300006844 Ga0075428_100038060 Ga0075428_1000380605 286
61 3300006846 Ga0075430_100117808 Ga0075430_1001178082 286
62 3300006847 Ga0075431_100041204 Ga0075431_1000412046 286
63 3300006880 Ga0075429_100022954 Ga0075429_1000229545 286
64 3300007076 Ga0075435_100066935 Ga0075435_1000669352 286
65 3300009101 Ga0105247_10030394 Ga0105247_100303944 286
66 3300009177 Ga0105248_10069642 Ga0105248_100696422 286
67 3300013306 Ga0163162_10363776 Ga0163162_103637762 286
68 3300014325 Ga0163163_10096424 Ga0163163_100964243 286
69 3300025915 Ga0207693_10077069 Ga0207693_100770692 286
70 3300025915 Ga0207693_10223113 Ga0207693_102231132 286
71 3300025916 Ga0207663_10244518 Ga0207663_102445181 286
72 3300025941 Ga0207711_10578720 Ga0207711_105787201 286
73 3300026088 Ga0207641_10137891 Ga0207641_101378913 286
74 3300027907 Ga0207428_10000225 Ga0207428_1000022535 286
75 3300044673 Ga0453683_0005760 Ga0453683_0005760_7367_8236 286
76 3300045051 Ga0451576_0004970 Ga0451576_0004970_12901_13770 286
77 3300048907 Ga0496104_0185055 Ga0496104_0185055_850_1713 286
78 3300048915 Ga0496112_0007099 Ga0496112_0007099_8604_9467 286
79 3300048915 Ga0496112_0079646 Ga0496112_0079646_916_1779 286
80 3300050507 nmdc:mga05p37_41981_c1 nmdc:mga05p37_41981_c1_1265_2134 286
81 3300050508 nmdc:mga09592_12781_c1 nmdc:mga09592_12781_c1_2970_3839 286
82 3300050510 nmdc:mga06r32_58720_c1 nmdc:mga06r32_58720_c1_1265_2134 286
83 3300050511 nmdc:mga08y16_1099_c1 nmdc:mga08y16_1099_c1_12584_13453 286
84 3300050512 nmdc:mga0n895_2258_c1 nmdc:mga0n895_2258_c1_13585_14454 286
85 3300050513 nmdc:mga0rr50_63996_c1 nmdc:mga0rr50_63996_c1_996_1865 286
86 3300003320 rootH2_10006838 rootH2_1000683810 287
87 3300014969 Ga0157376_10426053 Ga0157376_104260532 287
88 3300045976 Ga0466967_0059142 Ga0466967_0059142_2429_3301 287
89 3300002987 JGI25159J45721_1003157 JGI25159J45721_10031576 288
90 3300003320 rootH2_10006617 rootH2_1000661755 288
91 3300003320 rootH2_10013921 rootH2_1001392113 288
92 3300003322 rootL2_10013561 rootL2_100135615 288
93 3300003354 JGI25160J50197_1000053 JGI25160J50197_1000053122 288
94 3300003374 JGI25161J50226_1000039 JGI25161J50226_1000039122 288
95 3300004625 Ga0055543_1000015 Ga0055543_100001566 288
96 3300005262 Ga0065165_1000568 Ga0065165_10005683 288
97 3300005445 Ga0070708_100063872 Ga0070708_1000638724 288
98 3300005467 Ga0070706_100308906 Ga0070706_1003089063 288
99 3300005468 Ga0070707_100033748 Ga0070707_1000337485 288
100 3300005471 Ga0070698_100091168 Ga0070698_1000911683 288
101 3300005518 Ga0070699_100013252 Ga0070699_1000132524 288
102 3300005563 Ga0068855_100021407 Ga0068855_1000214073 288
103 3300005614 Ga0068856_100033204 Ga0068856_1000332044 288
104 3300007265 Ga0099794_10000068 Ga0099794_1000006818 288
105 3300009093 Ga0105240_10000119 Ga0105240_100001193 288
106 3300009093 Ga0105240_10002694 Ga0105240_1000269419 288
107 3300009093 Ga0105240_10155469 Ga0105240_101554693 288
108 3300009174 Ga0105241_10014760 Ga0105241_100147602 288
109 3300009174 Ga0105241_10237746 Ga0105241_102377462 288
110 3300009545 Ga0105237_10003977 Ga0105237_100039777 288
111 3300009545 Ga0105237_10022054 Ga0105237_100220547 288
112 3300009545 Ga0105237_10041961 Ga0105237_100419612 288
113 3300009551 Ga0105238_10109636 Ga0105238_101096362 288
114 3300009551 Ga0105238_10260809 Ga0105238_102608092 288
115 3300010375 Ga0105239_10001075 Ga0105239_100010759 288
116 3300013296 Ga0157374_10000001 Ga0157374_1000000182 288
117 3300013307 Ga0157372_10000994 Ga0157372_1000099412 288
118 3300013307 Ga0157372_10109645 Ga0157372_101096453 288
119 3300014325 Ga0163163_10041730 Ga0163163_100417303 288
120 3300025208 Ga0209436_118014 Ga0209436_1180141 288
121 3300025284 Ga0209130_1000038 Ga0209130_1000038122 288
122 3300025302 Ga0207426_1000081 Ga0207426_1000081162 288
123 3300025911 Ga0207654_10006078 Ga0207654_100060787 288
124 3300025913 Ga0207695_10000139 Ga0207695_10000139198 288
125 3300025913 Ga0207695_10000184 Ga0207695_1000018412 288
126 3300025913 Ga0207695_10111040 Ga0207695_101110403 288
127 3300025914 Ga0207671_10009162 Ga0207671_100091627 288
128 3300025914 Ga0207671_10022193 Ga0207671_100221932 288
129 3300025914 Ga0207671_10031441 Ga0207671_100314414 288
130 3300025922 Ga0207646_10014103 Ga0207646_100141033 288
131 3300025924 Ga0207694_10229439 Ga0207694_102294392 288
132 3300025949 Ga0207667_10040475 Ga0207667_100404751 288
133 3300026078 Ga0207702_10012632 Ga0207702_100126322 288
134 3300035113 Ga0373936_0012772 Ga0373936_0012772_272_1249 288
135 3300039450 Ga0436363_1134742 Ga0436363_1134742_613_1485 288
136 3300044683 Ga0466965_0066784 Ga0466965_0066784_147_1049 288
137 3300044706 Ga0466964_0124668 Ga0466964_0124668_124_1026 288
138 3300044735 Ga0466968_0010132 Ga0466968_0010132_2501_3376 288
139 3300044901 Ga0466960_0080728 Ga0466960_0080728_107_1009 288
140 3300046507 Ga0495606_0027682 Ga0495606_0027682_1937_2815 288
141 3300046522 Ga0495643_0022912 Ga0495643_0022912_1277_2155 288
142 3300047472 Ga0495686_0000004 Ga0495686_0000004_851726_852631 288
143 3300047472 Ga0495686_0000098 Ga0495686_0000098_27504_28415 288
144 3300047472 Ga0495686_0147820 Ga0495686_0147820_216_1094 288
145 3300048919 Ga0496116_0232076 Ga0496116_0232076_11_889 288
146 3300048922 Ga0496119_0042724 Ga0496119_0042724_231_1109 288
147 3300048923 Ga0496120_0115906 Ga0496120_0115906_442_1320 288
148 3300048923 Ga0496120_0150611 Ga0496120_0150611_172_1050 288
149 3300048924 Ga0496121_0014859 Ga0496121_0014859_3868_4746 288
150 3300048929 Ga0496126_0162983 Ga0496126_0162983_740_1795 288
151 3300053153 Ga0500616_0004127 Ga0500616_0004127_53_931 288
152 3300053178 Ga0500637_0195309 Ga0500637_0195309_275_1141 288

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00753

Lactamase_B

Metallo-beta-lactamase superfamily

77

268

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5b3r-assembly1.cif.gz_A crystal structure of metallo-beta-lactamase imp-18 from pseudomonas aeruginosa 0.8243 36 252
6t5k-assembly1.cif.gz_C ecv-1 from echinicola vietnamensis. environmental metallo-beta-lactamases exhibit high enzymatic activity under zinc deprivation 0.8091 7 244
6dja-assembly1.cif.gz_A zn-dependent 5/b/6 metallo-beta-lactamase from bacillus cereus 0.8039 14 244
2xf4-assembly1.cif.gz_A-2 crystal structure of salmonella enterica serovar typhimurium ycbl 0.8007 39 235
6op7-assembly1.cif.gz_A structure of oxidized vim-20 0.7996 10 245
ID Description Score Start End Superfamily
2xf4A00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8007 39 235 3.60.15.10
5ev6B00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7827 9 254 3.60.15.10
5lscA00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7816 10 249 3.60.15.10
1x8gA00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7809 36 245 3.60.15.10
af_I6XHY3_12_197_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7798 39 227 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A533VBV6-F1-model_v4 MBL fold metallo-hydrolase 0.9965 41 143 GO:0016787
AF-A0A2L1CNQ8-F1-model_v4 deleted 0.9955 10 288
AF-A0A856NN33-F1-model_v4 deleted 0.9928 35 285
AF-A0A3D9ZW07-F1-model_v4 Glyoxylase-like metal-dependent hydrolase (Beta-lactamase superfamily II) 0.9922 6 285 GO:0016787
AF-A0A7X2ZP72-F1-model_v4 deleted 0.9916 11 285

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pLDDT pTM Quality
94.64 0.92 High
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Predicted Structure (AlphaFold2)

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