F213907

General Info

Members Datasets Scaffolds Average Seq Length
152 100 152 285

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10007376|Ga0081538_1000737611
Length 338
Sequence MVLRVRTCWFPGLFYEANPESSTRYTGNDLLHVEAGSPPCSSPRIAAACCQNRGMESRSLPLPELPPAPPAHGDEQPRNERPVWRRLLGPLVALGLVAIKFGAKLKALLLLVPKLKIFTTSATMLVSIGAYALIWGWSFAAGFVLLLLVHEMGHVIQLRREGIKASAPMFIPFLGALVAMKELPKDAAAEARVGLAGPVLGSLGALVPLGLWAITGNELFQALAFVGFFLNLFNLLPVLPLDGGRAMAALSPWMWFGGYGLLVAATVAFPNPIMLLVLLFGGVETWRRWKERKSPEARAYNRVRPATRAAVAGVYLGLAAALAVGMDATFLERDFSDV

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
66 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
67 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
68 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
69 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
70 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
71 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
74 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
75 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
76 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
77 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
78 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
79 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
80 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
81 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
82 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
83 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
84 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
88 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
89 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
90 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
93 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
94 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
95 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
96 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
97 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
98 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
99 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
100 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 13.16
Rhizosphere 86.84
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10029540 3300003373 Bacteria 1421
2 Ga0070683_100056851 3300005329 Bacteria 3633
3 Ga0068868_100161796 3300005338 Unclassified 1849
4 Ga0070660_100013338 3300005339 Bacteria 5892
5 Ga0070674_100004814 3300005356 Bacteria 7735
6 Ga0070673_100617139 3300005364 Unclassified 990
7 Ga0070659_100000030 3300005366 Bacteria 128662
8 Ga0070714_100002408 3300005435 Bacteria 13780
9 Ga0070714_100043051 3300005435 Bacteria 3817
10 Ga0070713_100271037 3300005436 Bacteria 1554
11 Ga0070710_10000009 3300005437 Bacteria 165863
12 Ga0070710_10083073 3300005437 Bacteria 1873
13 Ga0070705_100002841 3300005440 Bacteria 8633
14 Ga0070681_10051739 3300005458 Bacteria 4097
15 Ga0070679_100143094 3300005530 Bacteria 2370
16 Ga0081455_10041345 3300005937 Bacteria 4055
17 Ga0081455_10134707 3300005937 Bacteria 1927
18 Ga0081538_10000045 3300005981 Bacteria 114622
19 Ga0081538_10007376 3300005981 Bacteria 9525
20 Ga0081538_10011410 3300005981 Bacteria 7200
21 Ga0081538_10024673 3300005981 Bacteria 4277
22 Ga0081538_10026448 3300005981 Bacteria 4058
23 Ga0081538_10099766 3300005981 Bacteria 1466
24 Ga0081540_1008210 3300005983 Bacteria 7311
25 Ga0070717_10000006 3300006028 Bacteria 353403
26 Ga0070717_10008534 3300006028 Bacteria 7652
27 Ga0070717_10165161 3300006028 Bacteria 1923
28 Ga0070717_10229702 3300006028 Bacteria 1633
29 Ga0070712_100045813 3300006175 Bacteria 3021
30 Ga0075428_100274754 3300006844 Bacteria 1813
31 Ga0075430_100018819 3300006846 Bacteria 5875
32 Ga0075430_100028137 3300006846 Bacteria 4776
33 Ga0075431_100008909 3300006847 Bacteria 10054
34 Ga0075431_100029806 3300006847 Bacteria 5618
35 Ga0075431_100079411 3300006847 Bacteria 3387
36 Ga0075433_10115998 3300006852 Bacteria 2376
37 Ga0075434_100064621 3300006871 Bacteria 3644
38 Ga0075429_100015151 3300006880 Bacteria 6681
39 Ga0075429_100178842 3300006880 Bacteria 1859
40 Ga0068865_100000040 3300006881 Bacteria 72979
41 Ga0068865_100461513 3300006881 Bacteria 1052
42 Ga0111539_10023788 3300009094 Bacteria 7527
43 Ga0111539_10065004 3300009094 Bacteria 4313
44 Ga0105245_10040691 3300009098 Bacteria 4142
45 Ga0105245_10493484 3300009098 Bacteria 1239
46 Ga0105247_10275810 3300009101 Bacteria 1158
47 Ga0114129_10065378 3300009147 Bacteria 5076
48 Ga0114129_10154122 3300009147 Bacteria 3143
49 Ga0114129_10599402 3300009147 Bacteria 1427
50 Ga0105243_10071675 3300009148 Bacteria 2802
51 Ga0105243_10101571 3300009148 Bacteria 2388
52 Ga0105242_10339235 3300009176 Unclassified 1384
53 Ga0105239_10622612 3300010375 Bacteria 1232
54 Ga0105239_10692215 3300010375 Bacteria 1165
55 Ga0105246_10127981 3300011119 Bacteria 1892
56 Ga0157369_10324272 3300013105 Bacteria 1601
57 Ga0157372_10287969 3300013307 Bacteria 1910
58 Ga0157375_10252615 3300013308 Bacteria 1924
59 Ga0157379_10014196 3300014968 Bacteria 6985
60 Ga0157376_10007651 3300014969 Bacteria 7736
61 Ga0207692_10000005 3300025898 Bacteria 370169
62 Ga0207707_10030987 3300025912 Bacteria 4678
63 Ga0207693_10012626 3300025915 Bacteria 6824
64 Ga0207660_10109585 3300025917 Bacteria 2075
65 Ga0207657_10013965 3300025919 Bacteria 7858
66 Ga0207652_10452185 3300025921 Bacteria 1158
67 Ga0207687_10024351 3300025927 Bacteria 4044
68 Ga0207664_10000060 3300025929 Bacteria 116764
69 Ga0207664_10002894 3300025929 Bacteria 11409
70 Ga0207664_10036703 3300025929 Bacteria 3788
71 Ga0207690_10000328 3300025932 Bacteria 31713
72 Ga0207704_10000079 3300025938 Bacteria 58183
73 Ga0207704_10102927 3300025938 Unclassified 1909
74 Ga0207661_10069507 3300025944 Bacteria 2871
75 Ga0207651_10192571 3300025960 Bacteria 1628
76 Ga0207678_10398502 3300026067 Bacteria 1191
77 Ga0207648_10162598 3300026089 Bacteria 1972
78 Ga0207675_100132190 3300026118 Bacteria 2366
79 Ga0207683_10099740 3300026121 Bacteria 2592
80 Ga0268266_10162399 3300028379 Bacteria 2022
81 Ga0268265_10643965 3300028380 Bacteria 1018
82 Ga0268264_10231824 3300028381 Bacteria 1706
83 Ga0307410_10031809 3300031852 Bacteria 3390
84 Ga0307409_100008357 3300031995 Bacteria 6276
85 Ga0307415_100137192 3300032126 Bacteria 1862
86 Ga0395900_0068529 3300037418 Bacteria 3646
87 Ga0395900_0375544 3300037418 Bacteria 1391
88 Ga0395900_0545541 3300037418 Bacteria 1105
89 Ga0395898_0026022 3300037466 Bacteria 5892
90 Ga0395898_0209040 3300037466 Bacteria 1862
91 Ga0395898_0387132 3300037466 Unclassified 1333
92 Ga0395898_0503464 3300037466 Bacteria 1152
93 Ga0395898_0600962 3300037466 Bacteria 1043
94 Ga0395905_0047183 3300037471 Unclassified 4038
95 Ga0395905_0158122 3300037471 Unclassified 2131
96 Ga0395905_0485805 3300037471 Bacteria 1135
97 Ga0395901_0088689 3300038443 Bacteria 3235
98 Ga0395901_0127808 3300038443 Bacteria 2671
99 Ga0395901_0171175 3300038443 Bacteria 2279
100 Ga0395901_0228595 3300038443 Bacteria 1943
101 Ga0395901_0243328 3300038443 Bacteria 1876
102 Ga0395901_0249139 3300038443 Bacteria 1851
103 Ga0395901_0544408 3300038443 Bacteria 1177
104 Ga0436362_0304595 3300039453 Bacteria 3694
105 Ga0466963_0197228 3300044694 Bacteria 1408
106 Ga0466971_0109575 3300044719 Bacteria 1273
107 Ga0466957_0006982 3300044842 Bacteria 6382
108 Ga0466960_0000051 3300044901 Bacteria 38836
109 Ga0466960_0178251 3300044901 Bacteria 1150
110 Ga0466959_0014632 3300045049 Bacteria 5708
111 Ga0466959_0212902 3300045049 Bacteria 1342
112 Ga0466958_0003645 3300045836 Bacteria 8034
113 Ga0466958_0048154 3300045836 Bacteria 2575
114 Ga0466967_0043593 3300045976 Bacteria 3885
115 Ga0466967_0045483 3300045976 Bacteria 3814
116 Ga0466967_0540344 3300045976 Bacteria 1146
117 Ga0495650_0000055 3300046471 Bacteria 308438
118 Ga0495652_0023762 3300046529 Bacteria 5433
119 Ga0495589_0177315 3300046794 Bacteria 1012
120 Ga0495684_0019185 3300047471 Bacteria 5263
121 Ga0496100_0002167 3300048903 Bacteria 9890
122 Ga0496100_0014914 3300048903 Bacteria 4526
123 Ga0496101_0001653 3300048904 Bacteria 13372
124 Ga0496102_0004928 3300048905 Bacteria 11311
125 Ga0496104_0221221 3300048907 Unclassified 1805
126 Ga0496105_0008878 3300048908 Bacteria 7832
127 Ga0496106_0009488 3300048909 Bacteria 7194
128 Ga0496107_0007115 3300048910 Bacteria 7708
129 Ga0496108_0032646 3300048911 Bacteria 4324
130 Ga0496108_0070683 3300048911 Bacteria 2946
131 Ga0496108_0125831 3300048911 Bacteria 2200
132 Ga0496109_0003462 3300048912 Bacteria 13183
133 Ga0496109_0165705 3300048912 Unclassified 2071
134 Ga0496110_0033333 3300048913 Bacteria 4454
135 Ga0496111_0064640 3300048914 Bacteria 2654
136 Ga0496111_0072245 3300048914 Bacteria 2511
137 Ga0496112_0005245 3300048915 Bacteria 11158
138 Ga0496112_0078749 3300048915 Bacteria 3259
139 Ga0496113_0015428 3300048916 Bacteria 5250
140 Ga0496115_0026284 3300048918 Bacteria 4542
141 Ga0501034_0023241 3300049571 Bacteria 6317
142 Ga0501079_0299668 3300049741 Bacteria 1258
143 nmdc:mga05p37_141657_c1 3300050507 Bacteria 2946
144 nmdc:mga05p37_97539_c1 3300050507 Bacteria 3620
145 nmdc:mga09592_81056_c1 3300050508 Bacteria 2765
146 nmdc:mga0qj67_32781_c1 3300050509 Bacteria 4053
147 nmdc:mga06r32_10750_c1 3300050510 Bacteria 8244
148 nmdc:mga06r32_79167_c1 3300050510 Bacteria 3197
149 nmdc:mga08y16_93153_c1 3300050511 Bacteria 3139
150 nmdc:mga0n895_21389_c1 3300050512 Bacteria 6048
151 nmdc:mga0rr50_60343_c1 3300050513 Bacteria 2255
152 Ga0466962_0046164 3300061719 Bacteria 2082

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0171175 Ga0395901_0171175_315_1187 239
2 3300044719 Ga0466971_0109575 Ga0466971_0109575_243_1148 246
3 3300044842 Ga0466957_0006982 Ga0466957_0006982_990_1895 246
4 3300045049 Ga0466959_0014632 Ga0466959_0014632_950_1855 246
5 3300045836 Ga0466958_0003645 Ga0466958_0003645_4488_5393 246
6 3300045976 Ga0466967_0043593 Ga0466967_0043593_1730_2635 246
7 3300046471 Ga0495650_0000055 Ga0495650_0000055_182194_183063 246
8 3300044901 Ga0466960_0178251 Ga0466960_0178251_127_1047 248
9 3300045976 Ga0466967_0540344 Ga0466967_0540344_121_1041 248
10 3300037418 Ga0395900_0068529 Ga0395900_0068529_2167_3033 251
11 3300037471 Ga0395905_0158122 Ga0395905_0158122_1108_1974 251
12 3300028379 Ga0268266_10162399 Ga0268266_101623992 252
13 3300038443 Ga0395901_0127808 Ga0395901_0127808_1178_2044 252
14 3300048911 Ga0496108_0125831 Ga0496108_0125831_746_1582 252
15 3300048912 Ga0496109_0003462 Ga0496109_0003462_3574_4410 252
16 3300013307 Ga0157372_10287969 Ga0157372_102879691 253
17 3300046794 Ga0495589_0177315 Ga0495589_0177315_40_903 255
18 3300037466 Ga0395898_0600962 Ga0395898_0600962_191_1021 256
19 3300011119 Ga0105246_10127981 Ga0105246_101279812 257
20 3300044901 Ga0466960_0000051 Ga0466960_0000051_5128_6018 257
21 3300009101 Ga0105247_10275810 Ga0105247_102758101 258
22 3300014968 Ga0157379_10014196 Ga0157379_100141962 258
23 3300005440 Ga0070705_100002841 Ga0070705_1000028413 259
24 3300005981 Ga0081538_10011410 Ga0081538_100114105 259
25 3300037471 Ga0395905_0485805 Ga0395905_0485805_70_927 260
26 3300006852 Ga0075433_10115998 Ga0075433_101159983 261
27 3300026067 Ga0207678_10398502 Ga0207678_103985022 261
28 3300009094 Ga0111539_10023788 Ga0111539_100237882 263
29 3300048911 Ga0496108_0070683 Ga0496108_0070683_1631_2497 263
30 3300048914 Ga0496111_0072245 Ga0496111_0072245_788_1654 263
31 3300049741 Ga0501079_0299668 Ga0501079_0299668_211_1035 263
32 3300009176 Ga0105242_10339235 Ga0105242_103392352 264
33 3300010375 Ga0105239_10622612 Ga0105239_106226121 264
34 3300005339 Ga0070660_100013338 Ga0070660_1000133381 265
35 3300005366 Ga0070659_100000030 Ga0070659_100000030125 265
36 3300005981 Ga0081538_10007376 Ga0081538_1000737611 265
37 3300005981 Ga0081538_10026448 Ga0081538_100264482 265
38 3300006028 Ga0070717_10000006 Ga0070717_100000062 265
39 3300006881 Ga0068865_100000040 Ga0068865_10000004033 265
40 3300014969 Ga0157376_10007651 Ga0157376_100076514 265
41 3300025919 Ga0207657_10013965 Ga0207657_100139655 265
42 3300025929 Ga0207664_10000060 Ga0207664_1000006057 265
43 3300025932 Ga0207690_10000328 Ga0207690_1000032828 265
44 3300025938 Ga0207704_10000079 Ga0207704_1000007933 265
45 3300048915 Ga0496112_0005245 Ga0496112_0005245_8993_9853 265
46 3300005329 Ga0070683_100056851 Ga0070683_1000568512 266
47 3300005458 Ga0070681_10051739 Ga0070681_100517393 266
48 3300005530 Ga0070679_100143094 Ga0070679_1001430941 266
49 3300013105 Ga0157369_10324272 Ga0157369_103242722 266
50 3300025912 Ga0207707_10030987 Ga0207707_100309874 266
51 3300025917 Ga0207660_10109585 Ga0207660_101095852 266
52 3300025921 Ga0207652_10452185 Ga0207652_104521851 266
53 3300025944 Ga0207661_10069507 Ga0207661_100695072 266
54 3300038443 Ga0395901_0544408 Ga0395901_0544408_31_867 266
55 3300048903 Ga0496100_0002167 Ga0496100_0002167_505_1350 266
56 3300048904 Ga0496101_0001653 Ga0496101_0001653_7962_8807 266
57 3300005338 Ga0068868_100161796 Ga0068868_1001617961 267
58 3300005364 Ga0070673_100617139 Ga0070673_1006171391 267
59 3300005435 Ga0070714_100043051 Ga0070714_1000430511 267
60 3300005437 Ga0070710_10000009 Ga0070710_10000009166 267
61 3300005983 Ga0081540_1008210 Ga0081540_10082102 267
62 3300006175 Ga0070712_100045813 Ga0070712_1000458132 267
63 3300006844 Ga0075428_100274754 Ga0075428_1002747542 267
64 3300006846 Ga0075430_100018819 Ga0075430_1000188193 267
65 3300006847 Ga0075431_100008909 Ga0075431_1000089093 267
66 3300006871 Ga0075434_100064621 Ga0075434_1000646213 267
67 3300006880 Ga0075429_100015151 Ga0075429_1000151516 267
68 3300006881 Ga0068865_100461513 Ga0068865_1004615131 267
69 3300009094 Ga0111539_10065004 Ga0111539_100650045 267
70 3300009098 Ga0105245_10040691 Ga0105245_100406913 267
71 3300009147 Ga0114129_10065378 Ga0114129_100653786 267
72 3300009147 Ga0114129_10154122 Ga0114129_101541222 267
73 3300009148 Ga0105243_10101571 Ga0105243_101015712 267
74 3300025898 Ga0207692_10000005 Ga0207692_10000005162 267
75 3300025915 Ga0207693_10012626 Ga0207693_100126262 267
76 3300025927 Ga0207687_10024351 Ga0207687_100243512 267
77 3300025929 Ga0207664_10036703 Ga0207664_100367032 267
78 3300025938 Ga0207704_10102927 Ga0207704_101029271 267
79 3300025960 Ga0207651_10192571 Ga0207651_101925711 267
80 3300026121 Ga0207683_10099740 Ga0207683_100997402 267
81 3300031852 Ga0307410_10031809 Ga0307410_100318092 267
82 3300031995 Ga0307409_100008357 Ga0307409_1000083578 267
83 3300032126 Ga0307415_100137192 Ga0307415_1001371922 267
84 3300037466 Ga0395898_0026022 Ga0395898_0026022_2569_3435 267
85 3300037466 Ga0395898_0503464 Ga0395898_0503464_234_1097 267
86 3300037471 Ga0395905_0047183 Ga0395905_0047183_2926_3792 267
87 3300038443 Ga0395901_0088689 Ga0395901_0088689_1983_2849 267
88 3300048903 Ga0496100_0014914 Ga0496100_0014914_321_1187 267
89 3300048905 Ga0496102_0004928 Ga0496102_0004928_3662_4528 267
90 3300048907 Ga0496104_0221221 Ga0496104_0221221_617_1483 267
91 3300048908 Ga0496105_0008878 Ga0496105_0008878_3765_4631 267
92 3300048909 Ga0496106_0009488 Ga0496106_0009488_5604_6470 267
93 3300048910 Ga0496107_0007115 Ga0496107_0007115_6119_6985 267
94 3300048911 Ga0496108_0032646 Ga0496108_0032646_3251_4117 267
95 3300048912 Ga0496109_0165705 Ga0496109_0165705_972_1838 267
96 3300048913 Ga0496110_0033333 Ga0496110_0033333_1753_2619 267
97 3300048914 Ga0496111_0064640 Ga0496111_0064640_711_1577 267
98 3300048915 Ga0496112_0078749 Ga0496112_0078749_1118_1984 267
99 3300048916 Ga0496113_0015428 Ga0496113_0015428_3538_4404 267
100 3300048918 Ga0496115_0026284 Ga0496115_0026284_3357_4223 267
101 3300049571 Ga0501034_0023241 Ga0501034_0023241_4301_5164 267
102 3300050507 nmdc:mga05p37_141657_c1 nmdc:mga05p37_141657_c1_2027_2875 267
103 3300050507 nmdc:mga05p37_97539_c1 nmdc:mga05p37_97539_c1_66_932 267
104 3300050508 nmdc:mga09592_81056_c1 nmdc:mga09592_81056_c1_813_1652 267
105 3300050509 nmdc:mga0qj67_32781_c1 nmdc:mga0qj67_32781_c1_1087_1926 267
106 3300050510 nmdc:mga06r32_10750_c1 nmdc:mga06r32_10750_c1_975_1814 267
107 3300050510 nmdc:mga06r32_79167_c1 nmdc:mga06r32_79167_c1_251_1117 267
108 3300050511 nmdc:mga08y16_93153_c1 nmdc:mga08y16_93153_c1_1736_2584 267
109 3300050512 nmdc:mga0n895_21389_c1 nmdc:mga0n895_21389_c1_880_1746 267
110 3300050513 nmdc:mga0rr50_60343_c1 nmdc:mga0rr50_60343_c1_46_912 267
111 3300005435 Ga0070714_100002408 Ga0070714_10000240814 268
112 3300005437 Ga0070710_10083073 Ga0070710_100830732 268
113 3300006028 Ga0070717_10229702 Ga0070717_102297021 268
114 3300006846 Ga0075430_100028137 Ga0075430_1000281374 268
115 3300006847 Ga0075431_100029806 Ga0075431_1000298061 268
116 3300009147 Ga0114129_10599402 Ga0114129_105994021 268
117 3300025929 Ga0207664_10002894 Ga0207664_100028945 268
118 3300028381 Ga0268264_10231824 Ga0268264_102318242 268
119 3300037418 Ga0395900_0375544 Ga0395900_0375544_425_1303 268
120 3300047471 Ga0495684_0019185 Ga0495684_0019185_1858_2772 268
121 3300005436 Ga0070713_100271037 Ga0070713_1002710371 269
122 3300006028 Ga0070717_10165161 Ga0070717_101651611 270
123 3300006847 Ga0075431_100079411 Ga0075431_1000794112 270
124 3300006880 Ga0075429_100178842 Ga0075429_1001788422 270
125 3300037466 Ga0395898_0387132 Ga0395898_0387132_81_932 272
126 3300038443 Ga0395901_0249139 Ga0395901_0249139_242_1093 272
127 3300039453 Ga0436362_0304595 Ga0436362_0304595_1452_2354 272
128 3300045976 Ga0466967_0045483 Ga0466967_0045483_339_1253 272
129 3300005356 Ga0070674_100004814 Ga0070674_1000048144 273
130 3300005937 Ga0081455_10041345 Ga0081455_100413453 273
131 3300006028 Ga0070717_10008534 Ga0070717_100085348 273
132 3300009098 Ga0105245_10493484 Ga0105245_104934842 273
133 3300009148 Ga0105243_10071675 Ga0105243_100716753 273
134 3300010375 Ga0105239_10692215 Ga0105239_106922152 273
135 3300013308 Ga0157375_10252615 Ga0157375_102526152 273
136 3300026089 Ga0207648_10162598 Ga0207648_101625982 273
137 3300026118 Ga0207675_100132190 Ga0207675_1001321902 273
138 3300037418 Ga0395900_0545541 Ga0395900_0545541_184_1038 273
139 3300037466 Ga0395898_0209040 Ga0395898_0209040_732_1589 273
140 3300038443 Ga0395901_0228595 Ga0395901_0228595_534_1391 273
141 3300044694 Ga0466963_0197228 Ga0466963_0197228_130_1053 273
142 3300045049 Ga0466959_0212902 Ga0466959_0212902_236_1159 273
143 3300045836 Ga0466958_0048154 Ga0466958_0048154_879_1802 273
144 3300046529 Ga0495652_0023762 Ga0495652_0023762_1991_2911 273
145 3300061719 Ga0466962_0046164 Ga0466962_0046164_70_993 273
146 3300005937 Ga0081455_10134707 Ga0081455_101347072 275
147 3300028380 Ga0268265_10643965 Ga0268265_106439651 275
148 3300038443 Ga0395901_0243328 Ga0395901_0243328_878_1750 275
149 3300005981 Ga0081538_10024673 Ga0081538_100246732 277
150 3300005981 Ga0081538_10099766 Ga0081538_100997661 280
151 3300003373 JGI25407J50210_10029540 JGI25407J50210_100295401 281
152 3300005981 Ga0081538_10000045 Ga0081538_1000004576 281

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02163

Peptidase_M50

Peptidase family M50

138

216

0.92

PF02163

Peptidase_M50

Peptidase family M50

210

279

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dwl-assembly1.cif.gz_E avd molecule from bordetella bacteriophage dgr 0.379 172 271
6e9z-assembly1.cif.gz_B dhf119 filament 0.3749 141 272
5iqj-assembly3.cif.gz_C 1.9 angstrom crystal structure of protein with unknown function from vibrio cholerae. 0.3706 97 264
5xsz-assembly1.cif.gz_A crystal structure of zebrafish lysophosphatidic acid receptor lpa6 0.3661 89 269
6j8v-assembly2.cif.gz_D structure of moen5-sso7d fusion protein in complex with ligand 2 0.3576 135 242
ID Description Score Start End Superfamily
af_H3BS89_163_270_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.5148 139 273 1.20.140.150
af_H3BS89_163_270_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.507 139 273 1.20.140.150
af_Q45RH2_55_171_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.5026 141 272 1.20.140.150
af_P34231_464_656_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.4855 138 272 2.30.29.30
af_Q2FZM9_1_96_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.4785 138 230 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A1V0UUS3-F1-model_v4 Peptidase M50 domain-containing protein 0.9465 76 179 GO:0006508
GO:0008237
GO:0016020
AF-A0A1V0UUS3-F1-model_v4 Peptidase M50 domain-containing protein 0.9213 76 179 GO:0006508
GO:0008237
GO:0016020
AF-A0A7S2R9L5-F1-model_v4 Peptidase M50 domain-containing protein 0.8938 55 180 GO:0006508
GO:0008237
GO:0016020
AF-B5YNS9-F1-model_v4 Transmembrane protein with sterol-regulatory element binding domain 0.8816 55 194 GO:0006508
GO:0008237
GO:0016020
AF-A0A7S2R9L5-F1-model_v4 Peptidase M50 domain-containing protein 0.8735 55 180 GO:0006508
GO:0008237
GO:0016020

Feature Viewer

pLDDT pTM Quality
75.14 0.65 Medium
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Predicted Structure (AlphaFold2)

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