F213865

General Info

Members Datasets Scaffolds Average Seq Length
152 107 152 425

Family's Representative Sequence

Representative Sequence 3300005719|Ga0068861_100007027|Ga0068861_1000070275
Length 470
Sequence MMAVSTSEASTLTTVLSSEEEKILACVHCGLCLEACPTYVVTADENDGPRGRIYLMRAVTEGRLKPDSLTFETHIDRCLGCRACEAACPAGVQYGRLLEAARAEITSSPAKLTWTHRILRFVLRHVWLQPPRLRAAFGFARLFRDSGLGKLLVTTGLAQGISARFEFALLLLDGSRGSGARNRESATGAGGMPANPDLSGQDAGTSTVAPTGAPMLFRGCVTEGLFKRVNEATERVLAANGCAAQAPSDQVCCGALHAHAGDLEGARHLARRNIEAFTSGSNGSEPAPIITNSGGCGAMLVSYGHLLSDDPKYADRAKEFSTRVRDIGQQLQALGFRNGANVGFARTTYDASCHLLHGQHAADASLGMLWAIPDLKYAMLNGSDVCCGGAGVYNLVEPQLSQEVLNEKLKHIAESGAEVLATGNPGCHMQIAAGAKLAGLPLRVCHPVELLDESYSRAGFYRPREDRPAQ

Samples

Sample ID Description Type Environment
1 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
70 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
71 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
76 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
77 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
78 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
90 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
91 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
92 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
93 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
94 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
95 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
96 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
103 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
104 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
105 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
106 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
107 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.97
Rhizosphere 96.71
Stem 0
Stem Tuber 0
Unclassified 1.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000009 3300002074 Bacteria 178563
2 JGI24034J26672_10000002 3300002239 Bacteria 925353
3 JGI25406J46586_10001260 3300003203 Bacteria 11881
4 Ga0065704_10077290 3300005289 Bacteria 4789
5 Ga0065707_10001666 3300005295 Bacteria 7173
6 Ga0070658_10003609 3300005327 Bacteria 12681
7 Ga0070690_100074174 3300005330 Bacteria 2215
8 Ga0070703_10000229 3300005406 Bacteria 27017
9 Ga0070700_100007995 3300005441 Bacteria 5744
10 Ga0070694_100015824 3300005444 Bacteria 4746
11 Ga0070708_100002615 3300005445 Bacteria 13938
12 Ga0070708_100107532 3300005445 Bacteria 2561
13 Ga0070706_100008900 3300005467 Bacteria 9349
14 Ga0070707_100000188 3300005468 Bacteria 61252
15 Ga0070707_100015029 3300005468 Bacteria 7264
16 Ga0070707_100035110 3300005468 Bacteria 4782
17 Ga0070707_100085692 3300005468 Unclassified 3046
18 Ga0070698_100000066 3300005471 Bacteria 77789
19 Ga0070698_100115787 3300005471 Unclassified 2644
20 Ga0070699_100013368 3300005518 Bacteria 7075
21 Ga0070697_100087631 3300005536 Bacteria 2570
22 Ga0070695_100057752 3300005545 Bacteria 2507
23 Ga0070695_100117574 3300005545 Bacteria 1814
24 Ga0070696_100088143 3300005546 Bacteria 2205
25 Ga0070704_100074860 3300005549 Unclassified 2471
26 Ga0068859_100041708 3300005617 Bacteria 4610
27 Ga0068864_100181472 3300005618 Unclassified 1925
28 Ga0068866_10003660 3300005718 Bacteria 6298
29 Ga0068861_100007027 3300005719 Bacteria 7693
30 Ga0068858_100000124 3300005842 Bacteria 80085
31 Ga0068860_100165277 3300005843 Bacteria 2136
32 Ga0081539_10000149 3300005985 Bacteria 161420
33 Ga0070715_10000009 3300006163 Bacteria 187315
34 Ga0070716_100000005 3300006173 Bacteria 273485
35 Ga0075433_10106821 3300006852 Bacteria 2481
36 Ga0075434_100009883 3300006871 Bacteria 8924
37 Ga0068865_100088292 3300006881 Bacteria 2243
38 Ga0075436_100000134 3300006914 Bacteria 44233
39 Ga0097620_100041707 3300006931 Bacteria 4610
40 Ga0075435_100000157 3300007076 Bacteria 39214
41 Ga0099794_10004199 3300007265 Bacteria 5618
42 Ga0105240_10126142 3300009093 Bacteria 3076
43 Ga0105247_10000031 3300009101 Bacteria 185793
44 Ga0114129_10001946 3300009147 Bacteria 28283
45 Ga0114129_10065030 3300009147 Bacteria 5091
46 Ga0105243_10000024 3300009148 Bacteria 197391
47 Ga0105243_10000465 3300009148 Bacteria 41909
48 Ga0105241_10000107 3300009174 Bacteria 59501
49 Ga0105241_10212259 3300009174 Unclassified 1622
50 Ga0105242_10000202 3300009176 Bacteria 46326
51 Ga0105242_10000624 3300009176 Bacteria 27809
52 Ga0105242_10002495 3300009176 Bacteria 14431
53 Ga0105249_10096718 3300009553 Bacteria 2771
54 Ga0105249_10144817 3300009553 Unclassified 2282
55 Ga0105239_10163540 3300010375 Bacteria 2488
56 Ga0157378_10000001 3300013297 Bacteria 352632
57 Ga0157378_10006623 3300013297 Bacteria 10122
58 Ga0157378_10096371 3300013297 Bacteria 2696
59 Ga0163162_10175148 3300013306 Bacteria 2270
60 Ga0157375_10007181 3300013308 Bacteria 9736
61 Ga0157380_10059717 3300014326 Unclassified 3044
62 Ga0163161_10017225 3300017792 Bacteria 5055
63 Ga0213876_10000277 3300021384 Bacteria 47161
64 Ga0207672_1000524 3300025223 Bacteria 4749
65 Ga0207653_10000249 3300025885 Bacteria 34758
66 Ga0207710_10000003 3300025900 Bacteria 1071597
67 Ga0207685_10000014 3300025905 Bacteria 180422
68 Ga0207705_10031569 3300025909 Bacteria 3782
69 Ga0207684_10055289 3300025910 Bacteria 3367
70 Ga0207654_10004267 3300025911 Bacteria 7212
71 Ga0207662_10005069 3300025918 Bacteria 6981
72 Ga0207646_10001098 3300025922 Bacteria 34444
73 Ga0207646_10004613 3300025922 Bacteria 14895
74 Ga0207646_10015245 3300025922 Bacteria 7271
75 Ga0207646_10073840 3300025922 Unclassified 3046
76 Ga0207644_10003656 3300025931 Bacteria 9972
77 Ga0207686_10000011 3300025934 Bacteria 216046
78 Ga0207686_10000186 3300025934 Bacteria 48055
79 Ga0207709_10000042 3300025935 Bacteria 254145
80 Ga0207709_10000541 3300025935 Bacteria 32440
81 Ga0207665_10000017 3300025939 Bacteria 130585
82 Ga0207665_10033152 3300025939 Unclassified 3422
83 Ga0207689_10032765 3300025942 Bacteria 4320
84 Ga0207703_10000056 3300026035 Bacteria 142103
85 Ga0207703_10090179 3300026035 Unclassified 2576
86 Ga0207708_10015089 3300026075 Bacteria 5790
87 Ga0207675_100000914 3300026118 Bacteria 29452
88 Ga0268264_10133697 3300028381 Bacteria 2203
89 Ga0436365_0557003 3300039437 Bacteria 48655
90 Ga0436360_0375566 3300039438 Bacteria 31269
91 Ga0436361_1042162 3300039447 Bacteria 31014
92 Ga0436362_0906718 3300039453 Unclassified 3606
93 Ga0451577_0001852 3300042876 Bacteria 26947
94 Ga0451577_0051701 3300042876 Bacteria 3668
95 Ga0451577_0233558 3300042876 Bacteria 1663
96 Ga0453683_0048659 3300044673 Bacteria 2659
97 Ga0453683_0094364 3300044673 Bacteria 1877
98 Ga0453684_0000282 3300044712 Bacteria 219571
99 Ga0453684_0026686 3300044712 Bacteria 8327
100 Ga0453684_0070472 3300044712 Bacteria 4427
101 Ga0496102_0114456 3300048905 Unclassified 2517
102 Ga0496106_0085788 3300048909 Unclassified 2424
103 Ga0496114_0184763 3300048917 Unclassified 1822
104 Ga0501031_0128967 3300049568 Bacteria 1652
105 Ga0501033_0009278 3300049570 Bacteria 7580
106 Ga0501033_0094452 3300049570 Bacteria 2187
107 Ga0501036_0002488 3300049572 Bacteria 14446
108 Ga0501038_0003059 3300049574 Bacteria 15602
109 Ga0501038_0128618 3300049574 Bacteria 2082
110 Ga0501039_0065656 3300049575 Unclassified 2815
111 Ga0501040_0002601 3300049576 Bacteria 11639
112 Ga0501041_0009900 3300049577 Bacteria 5614
113 Ga0501041_0038995 3300049577 Bacteria 2882
114 Ga0501042_0002977 3300049578 Bacteria 10540
115 Ga0501042_0034598 3300049578 Bacteria 3583
116 Ga0501043_0016237 3300049579 Bacteria 5839
117 Ga0501046_0001200 3300049580 Bacteria 25204
118 Ga0501048_0001246 3300049582 Bacteria 19286
119 Ga0501071_0003809 3300049587 Bacteria 9483
120 Ga0501072_0017713 3300049588 Bacteria 5477
121 Ga0501072_0020757 3300049588 Bacteria 5091
122 Ga0501072_0095626 3300049588 Bacteria 2361
123 Ga0501073_0102925 3300049589 Bacteria 1983
124 Ga0501074_0000676 3300049590 Bacteria 21294
125 Ga0501074_0082701 3300049590 Bacteria 2302
126 Ga0501075_0001464 3300049591 Bacteria 15364
127 Ga0501075_0029933 3300049591 Bacteria 4028
128 Ga0501075_0139183 3300049591 Bacteria 1849
129 Ga0501076_0004669 3300049592 Bacteria 9765
130 Ga0501076_0023281 3300049592 Bacteria 4773
131 Ga0501076_0138393 3300049592 Bacteria 1977
132 Ga0501077_0005057 3300049593 Bacteria 7999
133 Ga0501077_0054633 3300049593 Bacteria 2536
134 Ga0501079_0000325 3300049741 Bacteria 30007
135 Ga0501079_0039880 3300049741 Bacteria 3623
136 Ga0501080_0018825 3300049742 Bacteria 6394
137 Ga0501081_0000641 3300049743 Bacteria 19998
138 Ga0501035_0030787 3300049822 Bacteria 4891
139 Ga0501045_0041414 3300049824 Unclassified 3351
140 nmdc:mga05p37_1305_c1 3300050507 Bacteria 28993
141 nmdc:mga05p37_168265_c1 3300050507 Bacteria 2674
142 nmdc:mga05p37_337854_c1 3300050507 Unclassified 1777
143 nmdc:mga0rr50_147_c1 3300050513 Bacteria 39109
144 nmdc:mga08x19_12_c1 3300050514 Bacteria 395395
145 nmdc:mga0a205_156782_c1 3300050515 Bacteria 2175
146 Ga0501084_0024912 3300054114 Bacteria 4992
147 Ga0501082_0026859 3300060353 Bacteria 4960
148 Ga0501082_0042400 3300060353 Bacteria 3924
149 Ga0501082_0068102 3300060353 Bacteria 3065
150 Ga0530510_0003936 3300061734 Bacteria 10242
151 Ga0530510_0118271 3300061734 Bacteria 1944
152 Ga0530510_0131287 3300061734 Bacteria 1843

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049570 Ga0501033_0009278 Ga0501033_0009278_2943_4112 354
2 3300049572 Ga0501036_0002488 Ga0501036_0002488_5495_6664 354
3 3300049574 Ga0501038_0003059 Ga0501038_0003059_9498_10667 354
4 3300049575 Ga0501039_0065656 Ga0501039_0065656_1307_2476 354
5 3300049576 Ga0501040_0002601 Ga0501040_0002601_190_1359 354
6 3300049577 Ga0501041_0009900 Ga0501041_0009900_4100_5269 354
7 3300049578 Ga0501042_0002977 Ga0501042_0002977_4555_5724 354
8 3300049579 Ga0501043_0016237 Ga0501043_0016237_4555_5724 354
9 3300049580 Ga0501046_0001200 Ga0501046_0001200_12583_13752 354
10 3300049582 Ga0501048_0001246 Ga0501048_0001246_12421_13590 354
11 3300049587 Ga0501071_0003809 Ga0501071_0003809_862_2031 354
12 3300049588 Ga0501072_0020757 Ga0501072_0020757_2543_3712 354
13 3300049589 Ga0501073_0102925 Ga0501073_0102925_189_1358 354
14 3300049590 Ga0501074_0000676 Ga0501074_0000676_9845_11014 354
15 3300049591 Ga0501075_0001464 Ga0501075_0001464_11781_12950 354
16 3300049592 Ga0501076_0004669 Ga0501076_0004669_7217_8386 354
17 3300049593 Ga0501077_0005057 Ga0501077_0005057_3992_5161 354
18 3300049741 Ga0501079_0000325 Ga0501079_0000325_12940_14109 354
19 3300049742 Ga0501080_0018825 Ga0501080_0018825_4402_5571 354
20 3300049743 Ga0501081_0000641 Ga0501081_0000641_12344_13513 354
21 3300049822 Ga0501035_0030787 Ga0501035_0030787_3456_4625 354
22 3300049824 Ga0501045_0041414 Ga0501045_0041414_1842_3011 354
23 3300060353 Ga0501082_0068102 Ga0501082_0068102_517_1686 354
24 3300061734 Ga0530510_0003936 Ga0530510_0003936_7142_8311 354
25 3300049591 Ga0501075_0139183 Ga0501075_0139183_177_1550 358
26 3300049588 Ga0501072_0095626 Ga0501072_0095626_1029_2324 367
27 3300049592 Ga0501076_0138393 Ga0501076_0138393_474_1769 367
28 3300009093 Ga0105240_10126142 Ga0105240_101261423 369
29 3300044673 Ga0453683_0094364 Ga0453683_0094364_567_1823 370
30 3300006871 Ga0075434_100009883 Ga0075434_1000098838 382
31 3300005468 Ga0070707_100035110 Ga0070707_1000351102 385
32 3300005518 Ga0070699_100013368 Ga0070699_1000133683 385
33 3300025910 Ga0207684_10055289 Ga0207684_100552893 385
34 3300026035 Ga0207703_10090179 Ga0207703_100901792 387
35 3300013297 Ga0157378_10096371 Ga0157378_100963712 398
36 3300005289 Ga0065704_10077290 Ga0065704_100772903 402
37 3300048905 Ga0496102_0114456 Ga0496102_0114456_845_2125 402
38 3300061734 Ga0530510_0131287 Ga0530510_0131287_580_1803 402
39 3300025931 Ga0207644_10003656 Ga0207644_100036567 403
40 3300042876 Ga0451577_0001852 Ga0451577_0001852_21341_22633 411
41 3300042876 Ga0451577_0051701 Ga0451577_0051701_1523_2770 411
42 3300044712 Ga0453684_0000282 Ga0453684_0000282_2756_4048 411
43 3300044712 Ga0453684_0026686 Ga0453684_0026686_5686_6933 411
44 3300005618 Ga0068864_100181472 Ga0068864_1001814721 412
45 3300021384 Ga0213876_10000277 Ga0213876_1000027712 413
46 3300039437 Ga0436365_0557003 Ga0436365_0557003_20499_21839 413
47 3300005330 Ga0070690_100074174 Ga0070690_1000741743 416
48 3300005536 Ga0070697_100087631 Ga0070697_1000876312 416
49 3300009174 Ga0105241_10000107 Ga0105241_100001076 416
50 3300025911 Ga0207654_10004267 Ga0207654_100042676 416
51 3300044712 Ga0453684_0070472 Ga0453684_0070472_1841_3121 416
52 3300009553 Ga0105249_10144817 Ga0105249_101448172 417
53 3300039438 Ga0436360_0375566 Ga0436360_0375566_4440_5726 417
54 3300039447 Ga0436361_1042162 Ga0436361_1042162_28784_30070 417
55 3300039453 Ga0436362_0906718 Ga0436362_0906718_2047_3333 417
56 3300025922 Ga0207646_10004613 Ga0207646_100046133 418
57 3300061734 Ga0530510_0118271 Ga0530510_0118271_49_1380 419
58 3300042876 Ga0451577_0233558 Ga0451577_0233558_51_1343 420
59 3300005444 Ga0070694_100015824 Ga0070694_1000158244 422
60 3300005406 Ga0070703_10000229 Ga0070703_1000022913 423
61 3300005441 Ga0070700_100007995 Ga0070700_1000079954 423
62 3300025885 Ga0207653_10000249 Ga0207653_100002498 423
63 3300026075 Ga0207708_10015089 Ga0207708_100150894 423
64 3300049568 Ga0501031_0128967 Ga0501031_0128967_10_1326 427
65 3300049574 Ga0501038_0128618 Ga0501038_0128618_112_1428 427
66 3300049578 Ga0501042_0034598 Ga0501042_0034598_424_1740 427
67 3300049588 Ga0501072_0017713 Ga0501072_0017713_65_1381 427
68 3300049590 Ga0501074_0082701 Ga0501074_0082701_377_1693 427
69 3300049591 Ga0501075_0029933 Ga0501075_0029933_434_1750 427
70 3300054114 Ga0501084_0024912 Ga0501084_0024912_3416_4732 427
71 3300060353 Ga0501082_0026859 Ga0501082_0026859_3603_4919 427
72 3300005327 Ga0070658_10003609 Ga0070658_100036095 428
73 3300005468 Ga0070707_100085692 Ga0070707_1000856921 428
74 3300005471 Ga0070698_100115787 Ga0070698_1001157873 428
75 3300025909 Ga0207705_10031569 Ga0207705_100315692 428
76 3300025922 Ga0207646_10073840 Ga0207646_100738404 428
77 3300049570 Ga0501033_0094452 Ga0501033_0094452_810_2141 428
78 3300049577 Ga0501041_0038995 Ga0501041_0038995_1487_2818 428
79 3300049592 Ga0501076_0023281 Ga0501076_0023281_2740_4071 428
80 3300049593 Ga0501077_0054633 Ga0501077_0054633_554_1885 428
81 3300049741 Ga0501079_0039880 Ga0501079_0039880_1673_3004 428
82 3300060353 Ga0501082_0042400 Ga0501082_0042400_905_2236 428
83 3300009147 Ga0114129_10001946 Ga0114129_100019467 429
84 3300050507 nmdc:mga05p37_1305_c1 nmdc:mga05p37_1305_c1_10862_12196 429
85 3300014326 Ga0157380_10059717 Ga0157380_100597172 431
86 3300005295 Ga0065707_10001666 Ga0065707_100016667 432
87 3300005617 Ga0068859_100041708 Ga0068859_1000417084 432
88 3300006931 Ga0097620_100041707 Ga0097620_1000417074 432
89 3300009553 Ga0105249_10096718 Ga0105249_100967182 432
90 3300005445 Ga0070708_100002615 Ga0070708_1000026157 433
91 3300005467 Ga0070706_100008900 Ga0070706_1000089002 433
92 3300005545 Ga0070695_100057752 Ga0070695_1000577522 435
93 3300005718 Ga0068866_10003660 Ga0068866_100036603 435
94 3300005468 Ga0070707_100000188 Ga0070707_10000018828 436
95 3300005549 Ga0070704_100074860 Ga0070704_1000748603 436
96 3300025922 Ga0207646_10001098 Ga0207646_100010989 436
97 3300003203 JGI25406J46586_10001260 JGI25406J46586_100012603 437
98 3300005985 Ga0081539_10000149 Ga0081539_1000014995 437
99 3300025918 Ga0207662_10005069 Ga0207662_100050693 438
100 3300005843 Ga0068860_100165277 Ga0068860_1001652772 439
101 3300006163 Ga0070715_10000009 Ga0070715_10000009125 439
102 3300006914 Ga0075436_100000134 Ga0075436_10000013415 439
103 3300007076 Ga0075435_100000157 Ga0075435_10000015721 439
104 3300009176 Ga0105242_10002495 Ga0105242_100024956 439
105 3300013306 Ga0163162_10175148 Ga0163162_101751482 439
106 3300025905 Ga0207685_10000014 Ga0207685_1000001431 439
107 3300025934 Ga0207686_10000186 Ga0207686_1000018613 439
108 3300028381 Ga0268264_10133697 Ga0268264_101336972 439
109 3300050513 nmdc:mga0rr50_147_c1 nmdc:mga0rr50_147_c1_35679_37016 439
110 3300050514 nmdc:mga08x19_12_c1 nmdc:mga08x19_12_c1_66612_67949 439
111 3300006173 Ga0070716_100000005 Ga0070716_100000005149 440
112 3300009148 Ga0105243_10000465 Ga0105243_1000046520 440
113 3300009174 Ga0105241_10212259 Ga0105241_102122592 440
114 3300009176 Ga0105242_10000624 Ga0105242_1000062415 440
115 3300013297 Ga0157378_10000001 Ga0157378_10000001111 440
116 3300013308 Ga0157375_10007181 Ga0157375_100071815 440
117 3300017792 Ga0163161_10017225 Ga0163161_100172253 440
118 3300025935 Ga0207709_10000541 Ga0207709_100005415 440
119 3300025939 Ga0207665_10000017 Ga0207665_1000001772 440
120 3300048909 Ga0496106_0085788 Ga0496106_0085788_846_2231 440
121 3300009148 Ga0105243_10000024 Ga0105243_10000024126 442
122 3300009176 Ga0105242_10000202 Ga0105242_1000020235 442
123 3300025934 Ga0207686_10000011 Ga0207686_10000011151 442
124 3300025935 Ga0207709_10000042 Ga0207709_1000004280 442
125 3300025939 Ga0207665_10033152 Ga0207665_100331522 442
126 3300048917 Ga0496114_0184763 Ga0496114_0184763_39_1388 442
127 3300050507 nmdc:mga05p37_168265_c1 nmdc:mga05p37_168265_c1_1003_2412 442
128 3300005468 Ga0070707_100015029 Ga0070707_1000150295 443
129 3300009147 Ga0114129_10065030 Ga0114129_100650305 443
130 3300025922 Ga0207646_10015245 Ga0207646_100152455 443
131 3300005545 Ga0070695_100117574 Ga0070695_1001175742 445
132 3300006881 Ga0068865_100088292 Ga0068865_1000882922 445
133 3300005471 Ga0070698_100000066 Ga0070698_10000006619 447
134 3300005546 Ga0070696_100088143 Ga0070696_1000881432 448
135 3300007265 Ga0099794_10004199 Ga0099794_100041995 449
136 3300025942 Ga0207689_10032765 Ga0207689_100327653 451
137 3300050507 nmdc:mga05p37_337854_c1 nmdc:mga05p37_337854_c1_77_1465 452
138 3300005445 Ga0070708_100107532 Ga0070708_1001075322 454
139 3300044673 Ga0453683_0048659 Ga0453683_0048659_1179_2561 454
140 3300006852 Ga0075433_10106821 Ga0075433_101068212 456
141 3300013297 Ga0157378_10006623 Ga0157378_100066234 456
142 3300002074 JGI24748J21848_1000009 JGI24748J21848_100000940 457
143 3300002239 JGI24034J26672_10000002 JGI24034J26672_10000002694 457
144 3300005719 Ga0068861_100007027 Ga0068861_1000070275 457
145 3300005842 Ga0068858_100000124 Ga0068858_10000012453 457
146 3300009101 Ga0105247_10000031 Ga0105247_1000003145 457
147 3300010375 Ga0105239_10163540 Ga0105239_101635402 457
148 3300025223 Ga0207672_1000524 Ga0207672_10005242 457
149 3300025900 Ga0207710_10000003 Ga0207710_10000003679 457
150 3300026035 Ga0207703_10000056 Ga0207703_1000005623 457
151 3300026118 Ga0207675_100000914 Ga0207675_10000091413 457
152 3300050515 nmdc:mga0a205_156782_c1 nmdc:mga0a205_156782_c1_706_2118 457

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02754

CCG

Cysteine-rich domain

215

301

0.96

PF12800

Fer4_4

4Fe-4S binding domain

75

91

0.93

PF12800

Fer4_4

4Fe-4S binding domain

24

39

0.93

PF02754

CCG

Cysteine-rich domain

347

432

0.91

PF13187

Fer4_9

4Fe-4S dicluster domain

25

93

0.81

PF12838

Fer4_7

4Fe-4S dicluster domain

25

92

0.8

PF13534

Fer4_17

4Fe-4S dicluster domain

25

93

0.8

PF13484

Fer4_16

4Fe-4S double cluster binding domain

25

91

0.76

PF13183

Fer4_8

4Fe-4S dicluster domain

22

92

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bkb-assembly1.cif.gz_B formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) 0.7851 200 443
5odq-assembly1.cif.gz_B heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with bromoethanesulfonate. 0.762 201 443
7bkb-assembly1.cif.gz_B formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure) 0.6548 200 443
5odq-assembly1.cif.gz_B heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with bromoethanesulfonate. 0.645 201 443
5odr-assembly1.cif.gz_I heterodisulfide reductase / [nife]-hydrogenase complex from methanothermococcus thermolithotrophicus soaked with heterodisulfide for 2 minutes. 0.605 1 125
ID Description Score Start End Superfamily
af_P77252_132_217_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9425 336 419 3.40.30.10
af_P77252_3_85_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9382 202 287 3.40.30.10
af_P77252_132_217_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9117 336 419 3.40.30.10
af_P52074_170_256_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.911 202 287 3.40.30.10
af_P77252_3_85_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.906 202 287 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A7W1C007-F1-model_v4 (Fe-S)-binding protein 0.9781 203 451 GO:0016491
GO:0046872
GO:0051539
AF-A0A7Y4QML4-F1-model_v4 (Fe-S)-binding protein 0.9769 312 444 GO:0016491
GO:0046872
GO:0051539
AF-A0A836RML5-F1-model_v4 (Fe-S)-binding protein 0.9705 218 445 GO:0016491
GO:0046872
GO:0051539
AF-A0A3D0DAS7-F1-model_v4 4Fe-4S ferredoxin 0.9673 200 446 GO:0016491
GO:0046872
GO:0051539
AF-A0A7W1C007-F1-model_v4 (Fe-S)-binding protein 0.9664 203 451 GO:0016491
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
86.5 0.88 High
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Predicted Structure (AlphaFold2)

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