F212238

General Info

Members Datasets Scaffolds Average Seq Length
151 119 146 490

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_1060684|Ga0436361_1060684_707_2251
Length 514
Sequence MATVETKPSDAPRAAELLRNLKSKDGVYLMYIDGEWAAASDGGTRDLINPANGEVFAKVAEGTKEDAERAIRAAHRAFYEGSWGDSLALDRARLLFRLAEKIDEHAAELSRIETLNNGKPLRETEYDMADAANCFRYYAGLATKPGGETFDVPAASQTFVVREPIGVCGQIIPWNYPLLMAAWKLAPALAAGNVCILKPSELTPLTALRLATWIEELEFPKGVVNIVVGAGPVVGHTIAASDLVDKVAFTGGTKTGRAIMQAATGNLKKISLELGGKSPNIVFADADFNTAVDYALFGIFANAGQVCSAGSRLLVEESIADKFVNAVVERAKKIKVGDGFDPSAEMGPLISRAHEERVEGYIKAGVAEGATLACGGKRLPGELGEKGNFIEPTVFTHTKPDMKIVQEEIFGPVLVVQTFADEKEAVKLANDTIYGLAGAVFTNDVAKAHRVIRKLRAGITWINTYHPTYNEAPWGGYKQSGIGRELGTYGYEAYTEVKQINVNLAVEPSGWFSS

Samples

Sample ID Description Type Environment
1 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
2 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
3 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
4 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
5 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
25 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
26 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
27 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
28 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
29 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
31 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
34 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
37 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
58 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
59 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
60 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
61 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
64 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
67 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
68 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
69 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
72 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
73 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
74 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
75 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
76 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
77 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
78 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
79 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
80 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
81 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
82 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
83 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
84 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
85 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
86 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
87 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
91 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
92 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
93 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
94 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
95 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
96 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
97 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
98 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
99 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
100 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
101 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
102 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
103 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
114 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
115 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
116 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
117 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
118 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
119 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.36
Metatranscriptomes 1.32
Isolates 3.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.96
Nodule 0
Rhizoplane 10.6
Rhizosphere 64.24
Stem 0
Stem Tuber 0
Unclassified 19.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10003118 3300003320 Bacteria 7926
2 Ga0006562J51391_1007935 3300003578 Bacteria 4865
3 Ga0055528_1002820 3300003790 Bacteria 9089
4 Ga0070658_10000770 3300005327 Bacteria 27530
5 Ga0070690_100102759 3300005330 Bacteria 1897
6 Ga0070670_100088977 3300005331 Bacteria 2654
7 Ga0070689_100001045 3300005340 Bacteria 17397
8 Ga0070689_100074891 3300005340 Bacteria 2649
9 Ga0070668_100074751 3300005347 Bacteria 2644
10 Ga0070673_100078267 3300005364 Bacteria 2675
11 Ga0070714_100007560 3300005435 Bacteria 8460
12 Ga0070665_100000461 3300005548 Bacteria 59045
13 Ga0070665_100003706 3300005548 Bacteria 16182
14 Ga0068855_100032638 3300005563 Bacteria 6216
15 Ga0075428_100322412 3300006844 Bacteria 1660
16 Ga0105245_10201090 3300009098 Bacteria 1913
17 Ga0105243_10054971 3300009148 Bacteria 3162
18 Ga0105242_10052869 3300009176 Bacteria 3316
19 Ga0105237_10017387 3300009545 Bacteria 7455
20 Ga0105239_10220158 3300010375 Bacteria 2129
21 Ga0157374_10030848 3300013296 Bacteria 4868
22 Ga0157378_10133813 3300013297 Bacteria 2297
23 Ga0182008_10038694 3300014497 Bacteria 2385
24 Ga0157377_10019115 3300014745 Bacteria 3575
25 Ga0157376_10029239 3300014969 Bacteria 4389
26 Ga0206352_11240250 3300020078 Eukaryota 1604
27 Ga0213872_10002558 3300021361 Bacteria 10593
28 Ga0213872_10011279 3300021361 Bacteria 4232
29 Ga0213872_10012338 3300021361 Bacteria 4021
30 Ga0213874_10001110 3300021377 Bacteria 5515
31 Ga0213876_10003921 3300021384 Bacteria 8405
32 Ga0213875_10000001 3300021388 Bacteria 2793540
33 Ga0209147_102180 3300025229 Bacteria 5335
34 Ga0209673_1017131 3300025273 Bacteria 2679
35 Ga0209025_1003727 3300025294 Bacteria 13992
36 Ga0209050_1000459 3300025298 Bacteria 72943
37 Ga0207697_10015316 3300025315 Bacteria 3170
38 Ga0207655_1010872 3300025728 Bacteria 5478
39 Ga0207713_1015639 3300025735 Bacteria 3885
40 Ga0207680_10014486 3300025903 Bacteria 4083
41 Ga0207645_10049722 3300025907 Bacteria 2677
42 Ga0207671_10014911 3300025914 Bacteria 6112
43 Ga0207650_10040320 3300025925 Bacteria 3417
44 Ga0207664_10072929 3300025929 Bacteria 2769
45 Ga0207686_10025838 3300025934 Bacteria 3422
46 Ga0207709_10006722 3300025935 Bacteria 6442
47 Ga0207670_10001885 3300025936 Bacteria 10947
48 Ga0207691_10050288 3300025940 Bacteria 3816
49 Ga0207679_10197901 3300025945 Bacteria 1676
50 Ga0207668_10032285 3300025972 Bacteria 3458
51 Ga0207668_10055864 3300025972 Bacteria 2747
52 Ga0207641_10183814 3300026088 Bacteria 1916
53 Ga0207683_10097702 3300026121 Bacteria 2619
54 Ga0265356_1000007 3300028017 Bacteria 34613
55 Ga0268266_10000849 3300028379 Bacteria 39808
56 Ga0265338_10000367 3300028800 Bacteria 80983
57 Ga0265332_10008611 3300031238 Bacteria 4580
58 Ga0265325_10000865 3300031241 Bacteria 21795
59 Ga0265340_10043239 3300031247 Bacteria 2209
60 Ga0265339_10004984 3300031249 Bacteria 8940
61 Ga0265316_10009954 3300031344 Bacteria 8707
62 Ga0265316_10075871 3300031344 Bacteria 2584
63 Ga0307513_10003876 3300031456 Bacteria 20120
64 Ga0265313_10000587 3300031595 Bacteria 37842
65 Ga0265342_10007971 3300031712 Bacteria 7667
66 Ga0307409_100074460 3300031995 Bacteria 2714
67 Ga0373928_0000800 3300035084 Bacteria 6127
68 Ga0373932_0003284 3300035112 Bacteria 3909
69 Ga0316574_0106832 3300035398 Bacteria 1793
70 Ga0373931_0000001 3300035691 Bacteria 634029
71 Ga0373931_0000038 3300035691 Bacteria 74311
72 Ga0436364_0273345 3300037853 Bacteria 2794207
73 Ga0436364_1368993 3300037853 Bacteria 1894
74 Ga0436365_0179712 3300039437 Bacteria 2137
75 Ga0436365_1695035 3300039437 Bacteria 137591
76 Ga0436360_0264192 3300039438 Bacteria 5008
77 Ga0436360_0984070 3300039438 Bacteria 2085
78 Ga0436360_1166653 3300039438 Bacteria 3243
79 Ga0436361_0362753 3300039447 Bacteria 50865
80 Ga0436361_0917134 3300039447 Bacteria 44013
81 Ga0436361_0993921 3300039447 Bacteria 13562
82 Ga0436361_1060684 3300039447 Bacteria 8023
83 Ga0436363_1576184 3300039450 Bacteria 1683
84 Ga0436363_1680007 3300039450 Bacteria 61839
85 Ga0436362_0348094 3300039453 Bacteria 1523
86 Ga0436362_0653072 3300039453 Bacteria 18219
87 Ga0436362_1148149 3300039453 Bacteria 5570
88 Ga0436362_1279997 3300039453 Bacteria 4537
89 Ga0466963_0009882 3300044694 Bacteria 5760
90 Ga0466967_0045331 3300045976 Bacteria 3820
91 Ga0495603_0132883 3300046455 Bacteria 1449
92 Ga0495616_0008335 3300046513 Bacteria 6147
93 Ga0495643_0000057 3300046522 Bacteria 195145
94 Ga0495643_0000154 3300046522 Bacteria 112250
95 Ga0495670_0014538 3300046691 Bacteria 3869
96 Ga0495672_0030099 3300047320 Bacteria 3411
97 Ga0495683_0012242 3300047323 Bacteria 4507
98 Ga0495626_0001822 3300048091 Bacteria 16072
99 Ga0496102_0000109 3300048905 Bacteria 117315
100 Ga0496102_0008424 3300048905 Bacteria 8837
101 Ga0496103_0000241 3300048906 Bacteria 53415
102 Ga0496103_0001664 3300048906 Bacteria 14549
103 Ga0496104_0004040 3300048907 Bacteria 12722
104 Ga0496105_0000388 3300048908 Bacteria 28875
105 Ga0496108_0011145 3300048911 Bacteria 7305
106 Ga0496109_0008770 3300048912 Bacteria 8610
107 Ga0496109_0118573 3300048912 Bacteria 2464
108 Ga0496110_0094092 3300048913 Bacteria 2683
109 Ga0496110_0118608 3300048913 Bacteria 2383
110 Ga0496111_0009937 3300048914 Bacteria 6362
111 Ga0496111_0132434 3300048914 Bacteria 1845
112 Ga0496112_0002015 3300048915 Bacteria 16073
113 Ga0496114_0030854 3300048917 Bacteria 4410
114 Ga0496115_0000042 3300048918 Bacteria 118348
115 Ga0496116_0001591 3300048919 Bacteria 24964
116 Ga0496118_0000109 3300048921 Bacteria 153067
117 Ga0496118_0002858 3300048921 Bacteria 22528
118 Ga0496118_0065498 3300048921 Bacteria 2659
119 Ga0496119_0001472 3300048922 Bacteria 28189
120 Ga0496119_0013057 3300048922 Bacteria 6664
121 Ga0496121_0000038 3300048924 Bacteria 351739
122 Ga0496121_0000919 3300048924 Bacteria 53208
123 Ga0496124_0000201 3300048927 Bacteria 117658
124 Ga0496124_0082254 3300048927 Bacteria 2644
125 Ga0496125_0078670 3300048928 Bacteria 2533
126 Ga0496126_0000861 3300048929 Bacteria 53329
127 Ga0496126_0030009 3300048929 Bacteria 5159
128 Ga0496126_0096099 3300048929 Bacteria 2598
129 Ga0501031_0004756 3300049568 Bacteria 8819
130 Ga0501032_0000248 3300049569 Bacteria 45043
131 Ga0501033_0000418 3300049570 Bacteria 40687
132 Ga0501034_0000507 3300049571 Bacteria 62716
133 Ga0501036_0000240 3300049572 Bacteria 37046
134 Ga0501037_0000399 3300049573 Bacteria 36163
135 Ga0501038_0000211 3300049574 Bacteria 49814
136 Ga0501038_0000238 3300049574 Bacteria 46357
137 Ga0501039_0000073 3300049575 Bacteria 75516
138 Ga0501043_0000214 3300049579 Bacteria 52431
139 Ga0501046_0016352 3300049580 Bacteria 6217
140 Ga0501080_0010109 3300049742 Bacteria 8630
141 Ga0501035_0000189 3300049822 Bacteria 75562
142 nmdc:mga00v17_14300_c1 3300050491 Bacteria 4426
143 nmdc:mga0k408_113828_c1 3300050493 Bacteria 1600
144 nmdc:mga0n895_250128_c1 3300050512 Bacteria 1799
145 Ga0500618_000069 3300053125 Bacteria 87204
146 Ga0500616_0002618 3300053153 Bacteria 14693

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046455 Ga0495603_0132883 Ga0495603_0132883_18_1268 415
2 3300048907 Ga0496104_0004040 Ga0496104_0004040_47_1312 420
3 3300020078 Ga0206352_11240250 Ga0206352_112402501 461
4 3300031456 Ga0307513_10003876 Ga0307513_1000387617 464
5 3300031247 Ga0265340_10043239 Ga0265340_100432392 469
6 3300031344 Ga0265316_10075871 Ga0265316_100758712 469
7 3300047320 Ga0495672_0030099 Ga0495672_0030099_259_1755 470
8 3300035398 Ga0316574_0106832 Ga0316574_0106832_346_1764 471
9 3300028800 Ga0265338_10000367 Ga0265338_1000036738 472
10 3300031238 Ga0265332_10008611 Ga0265332_100086112 472
11 3300031241 Ga0265325_10000865 Ga0265325_1000086518 472
12 3300031249 Ga0265339_10004984 Ga0265339_100049849 472
13 3300031344 Ga0265316_10009954 Ga0265316_100099543 472
14 3300031595 Ga0265313_10000587 Ga0265313_1000058722 472
15 3300031712 Ga0265342_10007971 Ga0265342_100079713 472
16 3300050512 nmdc:mga0n895_250128_c1 nmdc:mga0n895_250128_c1_217_1638 472
17 3300021388 Ga0213875_10000001 Ga0213875_100000011199 473
18 3300037853 Ga0436364_0273345 Ga0436364_0273345_1252973_1254511 473
19 3300039438 Ga0436360_1166653 Ga0436360_1166653_867_2402 473
20 3300049568 Ga0501031_0004756 Ga0501031_0004756_6374_7831 473
21 3300049569 Ga0501032_0000248 Ga0501032_0000248_4452_5909 473
22 3300049570 Ga0501033_0000418 Ga0501033_0000418_20930_22387 473
23 3300049571 Ga0501034_0000507 Ga0501034_0000507_42959_44416 473
24 3300049572 Ga0501036_0000240 Ga0501036_0000240_21588_23045 473
25 3300049573 Ga0501037_0000399 Ga0501037_0000399_20711_22168 473
26 3300049574 Ga0501038_0000238 Ga0501038_0000238_39148_40605 473
27 3300049575 Ga0501039_0000073 Ga0501039_0000073_55788_57245 473
28 3300049579 Ga0501043_0000214 Ga0501043_0000214_32674_34131 473
29 3300049580 Ga0501046_0016352 Ga0501046_0016352_4641_6098 473
30 3300049822 Ga0501035_0000189 Ga0501035_0000189_55806_57263 473
31 3300048924 Ga0496121_0000038 Ga0496121_0000038_74854_76350 474
32 3300048929 Ga0496126_0030009 Ga0496126_0030009_3573_5069 474
33 3300014497 Ga0182008_10038694 Ga0182008_100386942 476
34 iso_pu_bacteria 2857547612 2857550427 476
35 3300046513 Ga0495616_0008335 Ga0495616_0008335_4375_5874 477
36 3300046522 Ga0495643_0000154 Ga0495643_0000154_5549_7048 477
37 3300048091 Ga0495626_0001822 Ga0495626_0001822_11104_12603 477
38 3300048921 Ga0496118_0002858 Ga0496118_0002858_8045_9523 477
39 3300003790 Ga0055528_1002820 Ga0055528_10028203 478
40 3300009098 Ga0105245_10201090 Ga0105245_102010902 478
41 3300009148 Ga0105243_10054971 Ga0105243_100549712 478
42 3300009176 Ga0105242_10052869 Ga0105242_100528692 478
43 3300025229 Ga0209147_102180 Ga0209147_1021806 478
44 3300025273 Ga0209673_1017131 Ga0209673_10171312 478
45 3300025294 Ga0209025_1003727 Ga0209025_10037274 478
46 3300025728 Ga0207655_1010872 Ga0207655_10108723 478
47 3300025735 Ga0207713_1015639 Ga0207713_10156395 478
48 3300025934 Ga0207686_10025838 Ga0207686_100258381 478
49 3300025935 Ga0207709_10006722 Ga0207709_100067225 478
50 3300047323 Ga0495683_0012242 Ga0495683_0012242_21_1508 478
51 3300048905 Ga0496102_0008424 Ga0496102_0008424_882_2369 478
52 3300048906 Ga0496103_0001664 Ga0496103_0001664_573_2060 478
53 3300048911 Ga0496108_0011145 Ga0496108_0011145_3700_5187 478
54 3300048912 Ga0496109_0008770 Ga0496109_0008770_7084_8571 478
55 3300048914 Ga0496111_0009937 Ga0496111_0009937_1022_2509 478
56 3300048915 Ga0496112_0002015 Ga0496112_0002015_6955_8442 478
57 3300048921 Ga0496118_0065498 Ga0496118_0065498_540_2027 478
58 3300048922 Ga0496119_0001472 Ga0496119_0001472_12040_13527 478
59 3300048927 Ga0496124_0082254 Ga0496124_0082254_660_2147 478
60 3300048928 Ga0496125_0078670 Ga0496125_0078670_219_1706 478
61 3300048929 Ga0496126_0096099 Ga0496126_0096099_939_2426 478
62 3300046691 Ga0495670_0014538 Ga0495670_0014538_2224_3696 479
63 3300048905 Ga0496102_0000109 Ga0496102_0000109_41843_43291 479
64 3300048906 Ga0496103_0000241 Ga0496103_0000241_41991_43439 479
65 3300048908 Ga0496105_0000388 Ga0496105_0000388_1539_2987 479
66 3300048913 Ga0496110_0118608 Ga0496110_0118608_125_1573 479
67 3300048914 Ga0496111_0132434 Ga0496111_0132434_310_1758 479
68 3300048917 Ga0496114_0030854 Ga0496114_0030854_1866_3314 479
69 3300048918 Ga0496115_0000042 Ga0496115_0000042_42036_43484 479
70 3300048919 Ga0496116_0001591 Ga0496116_0001591_20992_22440 479
71 3300048921 Ga0496118_0000109 Ga0496118_0000109_42099_43547 479
72 3300048922 Ga0496119_0013057 Ga0496119_0013057_2286_3734 479
73 3300048924 Ga0496121_0000919 Ga0496121_0000919_41823_43271 479
74 3300048927 Ga0496124_0000201 Ga0496124_0000201_73155_74603 479
75 3300048929 Ga0496126_0000861 Ga0496126_0000861_41909_43357 479
76 3300053125 Ga0500618_000069 Ga0500618_000069_74323_75861 480
77 iso_pu_bacteria 2582581311 2585295614 480
78 3300048913 Ga0496110_0094092 Ga0496110_0094092_453_1898 481
79 3300035084 Ga0373928_0000800 Ga0373928_0000800_1961_3454 482
80 3300035112 Ga0373932_0003284 Ga0373932_0003284_1021_2514 482
81 3300035691 Ga0373931_0000001 Ga0373931_0000001_552772_554265 482
82 3300035691 Ga0373931_0000038 Ga0373931_0000038_51165_52670 482
83 3300050491 nmdc:mga00v17_14300_c1 nmdc:mga00v17_14300_c1_819_2300 482
84 3300044694 Ga0466963_0009882 Ga0466963_0009882_520_2028 483
85 3300045976 Ga0466967_0045331 Ga0466967_0045331_1792_3300 483
86 3300039437 Ga0436365_0179712 Ga0436365_0179712_326_1783 484
87 3300039437 Ga0436365_1695035 Ga0436365_1695035_104550_106004 484
88 3300039450 Ga0436363_1576184 Ga0436363_1576184_73_1527 484
89 3300039450 Ga0436363_1680007 Ga0436363_1680007_43311_44765 484
90 3300039453 Ga0436362_0348094 Ga0436362_0348094_25_1479 484
91 3300039453 Ga0436362_0653072 Ga0436362_0653072_8114_9568 484
92 3300037853 Ga0436364_1368993 Ga0436364_1368993_312_1832 486
93 3300039438 Ga0436360_0984070 Ga0436360_0984070_167_1690 486
94 iso_pu_bacteria 2512564039 2512736446 486
95 3300031995 Ga0307409_100074460 Ga0307409_1000744602 487
96 iso_pu_bacteria 2786546548 2787507151 487
97 3300003578 Ga0006562J51391_1007935 Ga0006562J51391_10079352 488
98 3300005331 Ga0070670_100088977 Ga0070670_1000889771 488
99 3300005340 Ga0070689_100074891 Ga0070689_1000748912 488
100 3300005347 Ga0070668_100074751 Ga0070668_1000747512 488
101 3300005364 Ga0070673_100078267 Ga0070673_1000782672 488
102 3300013296 Ga0157374_10030848 Ga0157374_100308483 488
103 3300013297 Ga0157378_10133813 Ga0157378_101338132 488
104 3300014745 Ga0157377_10019115 Ga0157377_100191152 488
105 3300014969 Ga0157376_10029239 Ga0157376_100292392 488
106 3300025925 Ga0207650_10040320 Ga0207650_100403203 488
107 3300025972 Ga0207668_10055864 Ga0207668_100558642 488
108 3300048912 Ga0496109_0118573 Ga0496109_0118573_178_1644 488
109 3300049742 Ga0501080_0010109 Ga0501080_0010109_2235_3701 488
110 3300050493 nmdc:mga0k408_113828_c1 nmdc:mga0k408_113828_c1_67_1533 488
111 3300021361 Ga0213872_10002558 Ga0213872_100025588 489
112 3300021361 Ga0213872_10011279 Ga0213872_100112792 489
113 3300021361 Ga0213872_10012338 Ga0213872_100123382 489
114 3300021377 Ga0213874_10001110 Ga0213874_100011104 489
115 3300021384 Ga0213876_10003921 Ga0213876_100039215 489
116 3300039438 Ga0436360_0264192 Ga0436360_0264192_2662_4194 489
117 3300039447 Ga0436361_0362753 Ga0436361_0362753_47959_49497 489
118 3300039447 Ga0436361_0917134 Ga0436361_0917134_35536_37068 489
119 3300039447 Ga0436361_0993921 Ga0436361_0993921_5565_7103 489
120 3300039447 Ga0436361_1060684 Ga0436361_1060684_707_2251 489
121 3300039453 Ga0436362_1148149 Ga0436362_1148149_832_2364 489
122 3300039453 Ga0436362_1279997 Ga0436362_1279997_432_1964 489
123 3300005435 Ga0070714_100007560 Ga0070714_1000075602 490
124 3300025929 Ga0207664_10072929 Ga0207664_100729292 490
125 iso_pu_bacteria 2857604169 2857607055 490
126 3300028017 Ga0265356_1000007 Ga0265356_100000715 491
127 3300005340 Ga0070689_100001045 Ga0070689_10000104510 492
128 3300005548 Ga0070665_100000461 Ga0070665_1000004618 492
129 3300005563 Ga0068855_100032638 Ga0068855_1000326387 492
130 3300010375 Ga0105239_10220158 Ga0105239_102201582 492
131 3300025936 Ga0207670_10001885 Ga0207670_100018856 492
132 3300026088 Ga0207641_10183814 Ga0207641_101838142 492
133 3300028379 Ga0268266_10000849 Ga0268266_1000084926 492
134 3300003320 rootH2_10003118 rootH2_100031186 493
135 3300005327 Ga0070658_10000770 Ga0070658_100007704 493
136 3300005330 Ga0070690_100102759 Ga0070690_1001027591 493
137 3300005548 Ga0070665_100003706 Ga0070665_10000370614 493
138 3300006844 Ga0075428_100322412 Ga0075428_1003224121 493
139 3300009545 Ga0105237_10017387 Ga0105237_100173876 493
140 3300025298 Ga0209050_1000459 Ga0209050_100045919 493
141 3300025315 Ga0207697_10015316 Ga0207697_100153163 493
142 3300025903 Ga0207680_10014486 Ga0207680_100144862 493
143 3300025907 Ga0207645_10049722 Ga0207645_100497222 493
144 3300025914 Ga0207671_10014911 Ga0207671_100149112 493
145 3300025940 Ga0207691_10050288 Ga0207691_100502882 493
146 3300025945 Ga0207679_10197901 Ga0207679_101979012 493
147 3300025972 Ga0207668_10032285 Ga0207668_100322854 493
148 3300026121 Ga0207683_10097702 Ga0207683_100977022 493
149 3300046522 Ga0495643_0000057 Ga0495643_0000057_167812_169293 493
150 3300049574 Ga0501038_0000211 Ga0501038_0000211_45288_46769 493
151 3300053153 Ga0500616_0002618 Ga0500616_0002618_10822_12303 493

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

36

500

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nea-assembly1.cif.gz_A 1.90 angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betb) from staphylococcus aureus in complex with nad+ and bme-free cys289 0.9893 5 489
4zxu-assembly1.cif.gz_B 2.85 angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betb) h448f/p449m double mutant from staphylococcus aureus in complex with nad+ and bme-free cys289 0.989 5 489
4zwl-assembly1.cif.gz_C 2.60 angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betb) h448f/y450l double mutant from staphylococcus aureus in complex with nad+ and bme-free cys289 0.989 5 489
5ez4-assembly1.cif.gz_D 2.11 angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betb) p449m/y450l double mutant from staphylococcus aureus in complex with nad+ and bme-modified cys289 0.9884 5 489
4mpb-assembly1.cif.gz_A 1.7 angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betb) from staphylococcus aureus 0.9882 5 489
ID Description Score Start End Superfamily
af_Q2FV10_3_257_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.991 5 252 3.40.605.10
af_A0A1D6MRK0_1_96_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9876 158 252 3.40.605.10
3ed6A02 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9855 253 446 3.40.309.10
af_P40047_292_478_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9853 254 444 3.40.309.10
af_A0A0G2KZR6_2_316_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.983 159 475 3.40.605.10
ID Description Score Start End GO Terms
AF-A0A5C8X3K7-F1-model_v4 deleted 0.9888 83 440
AF-A0A838R7A0-F1-model_v4 Aldehyde dehydrogenase family protein 0.9884 7 489 GO:0016620
AF-A0A6P1MJ34-F1-model_v4 Aldehyde dehydrogenase family protein 0.9875 7 489 GO:0016620
AF-A0A6J6T9G3-F1-model_v4 Unannotated protein 0.9855 3 479 GO:0016620
AF-A0A532ALH7-F1-model_v4 Aldehyde dehydrogenase family protein 0.9849 71 201 GO:0004777
GO:0009450

Feature Viewer

pLDDT pTM Quality
95.15 0.93 High
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Predicted Structure (AlphaFold2)

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