F212200

General Info

Members Datasets Scaffolds Average Seq Length
151 111 147 421

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0530951|Ga0436364_0530951_9627_11066
Length 479
Sequence MPINTGRQKGLEMVNDDKAPQSSQDTTGGLNQDNGAQNAKQPEVTGTDATSLTRRGFLKTTAAVSAAALMSSLGQNYAHAQGNDRLRVGLIGCGGRGTGAAGDCAHAHPSVQIVALADLFQDRLNGARGSLAGQLKDQFKVNDDHTFVGWDAYQHLVKSDVDLVLMATPPGFRRITLQAAVEAGKHVFMEKPVAVDPAGVRSVIASSDLAAQKKLAVVTGTQRRHQANYIETINRIHDGAIGDVLSGQIYWNQGGLWLHERQPNWSDMEYQIRNWLYYTWLSGDHITEQHVHNIDVMNWVMNGHPVSAYAMGGRQVRTDPAYGQIFDHFAVEYEFANGARWSSQCRQIDGTDSRVAENVVGTKGTSNPSAGSIKGATNYRFDGPSRNPYEQEHVDLIESIRNGKPLNEGRRIAESTLTAIIGRESAYTGKQIKWDDAMNSTLDLLPAKLEFGPAPIPEVAIPGKTQLNRTQLIGNASKA

Samples

Sample ID Description Type Environment
1 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
8 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
63 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
64 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
73 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
74 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
79 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
80 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
81 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
82 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
92 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
93 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
94 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
95 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
96 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
97 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
100 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
101 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
102 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
103 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
104 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
105 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
106 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
107 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
108 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
109 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
110 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
111 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.03
Metatranscriptomes 3.31
Isolates 0.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.91
Nodule 0
Rhizoplane 0
Rhizosphere 82.78
Stem 0
Stem Tuber 0
Unclassified 3.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100050270 3300005331 Bacteria 3583
2 Ga0070675_100312167 3300005354 Bacteria 1387
3 Ga0070714_100048646 3300005435 Bacteria 3606
4 Ga0070694_100102236 3300005444 Bacteria 2029
5 Ga0070678_100097817 3300005456 Bacteria 2267
6 Ga0070685_10128987 3300005466 Bacteria 1579
7 Ga0070672_100194338 3300005543 Bacteria 1695
8 Ga0070665_100000213 3300005548 Bacteria 100019
9 Ga0070704_100014540 3300005549 Bacteria 4918
10 Ga0068855_100088853 3300005563 Bacteria 3569
11 Ga0070664_100234314 3300005564 Bacteria 1646
12 Ga0068856_100068758 3300005614 Bacteria 3501
13 Ga0070702_100018220 3300005615 Bacteria 3638
14 Ga0068859_100171125 3300005617 Bacteria 2253
15 Ga0068864_100288120 3300005618 Bacteria 1535
16 Ga0068860_100063005 3300005843 Bacteria 3523
17 Ga0075363_100073169 3300006048 Bacteria 1864
18 Ga0075364_10008497 3300006051 Bacteria 6141
19 Ga0075362_10023152 3300006177 Bacteria 2625
20 Ga0075367_10038119 3300006178 Bacteria 2797
21 Ga0075367_10058355 3300006178 Bacteria 2296
22 Ga0075367_10094521 3300006178 Bacteria 1822
23 Ga0075367_10128445 3300006178 Bacteria 1566
24 Ga0075366_10007084 3300006195 Bacteria 6173
25 Ga0075366_10018355 3300006195 Bacteria 4038
26 Ga0075428_100023559 3300006844 Bacteria 6815
27 Ga0075430_100016364 3300006846 Bacteria 6315
28 Ga0075430_100026763 3300006846 Bacteria 4905
29 Ga0075430_100048235 3300006846 Bacteria 3595
30 Ga0075431_100056716 3300006847 Bacteria 4040
31 Ga0097620_100171123 3300006931 Bacteria 2253
32 Ga0105240_10000309 3300009093 Bacteria 93964
33 Ga0105240_10024732 3300009093 Bacteria 7910
34 Ga0105245_10036082 3300009098 Bacteria 4390
35 Ga0105247_10043356 3300009101 Bacteria 2756
36 Ga0114129_10004422 3300009147 Bacteria 19831
37 Ga0114129_10044254 3300009147 Bacteria 6262
38 Ga0105243_10211492 3300009148 Bacteria 1708
39 Ga0105248_10063251 3300009177 Bacteria 4154
40 Ga0157369_10000033 3300013105 Bacteria 201124
41 Ga0157369_10112494 3300013105 Bacteria 2892
42 Ga0157369_10137694 3300013105 Bacteria 2584
43 Ga0157372_10007535 3300013307 Bacteria 11574
44 Ga0157372_10051914 3300013307 Bacteria 4564
45 Ga0157372_10154008 3300013307 Bacteria 2654
46 Ga0157372_10155255 3300013307 Bacteria 2643
47 Ga0157372_10341599 3300013307 Bacteria 1744
48 Ga0157375_10126569 3300013308 Bacteria 2670
49 Ga0163163_10187879 3300014325 Bacteria 2114
50 Ga0182006_1000068 3300015261 Bacteria 144823
51 Ga0163161_10000858 3300017792 Bacteria 23684
52 Ga0197907_11300679 3300020069 Unclassified 1465
53 Ga0206356_10570266 3300020070 Bacteria 1349
54 Ga0206352_10475408 3300020078 Bacteria 1613
55 Ga0213875_10000022 3300021388 Bacteria 215075
56 Ga0213875_10000096 3300021388 Bacteria 101907
57 Ga0224712_10050783 3300022467 Bacteria 1612
58 Ga0207710_10023725 3300025900 Bacteria 2637
59 Ga0207680_10149329 3300025903 Unclassified 1557
60 Ga0207695_10000126 3300025913 Bacteria 228511
61 Ga0207695_10003095 3300025913 Bacteria 23819
62 Ga0207659_10142724 3300025926 Bacteria 1860
63 Ga0207644_10075012 3300025931 Bacteria 2484
64 Ga0207706_10093739 3300025933 Bacteria 2641
65 Ga0207669_10031526 3300025937 Bacteria 2963
66 Ga0207691_10116005 3300025940 Bacteria 2377
67 Ga0207667_10058913 3300025949 Bacteria 4025
68 Ga0207702_10357879 3300026078 Unclassified 1398
69 Ga0207648_10138041 3300026089 Bacteria 2148
70 Ga0207675_100029083 3300026118 Bacteria 5150
71 Ga0207683_10066304 3300026121 Bacteria 3183
72 Ga0207698_10056380 3300026142 Bacteria 3034
73 Ga0268266_10000235 3300028379 Bacteria 94600
74 Ga0268264_10037466 3300028381 Bacteria 3998
75 Ga0265760_10003986 3300031090 Bacteria 4258
76 Ga0307405_10139470 3300031731 Bacteria 1688
77 Ga0307406_10084942 3300031901 Bacteria 2115
78 Ga0307407_10004067 3300031903 Bacteria 6142
79 Ga0307409_100149981 3300031995 Bacteria 2023
80 Ga0307409_100186819 3300031995 Bacteria 1840
81 Ga0307416_100082175 3300032002 Bacteria 2728
82 Ga0307414_10091037 3300032004 Bacteria 2266
83 Ga0307415_100112929 3300032126 Bacteria 2020
84 Ga0307415_100149037 3300032126 Bacteria 1798
85 Ga0395899_0016171 3300037312 Bacteria 5687
86 Ga0395905_0058291 3300037471 Bacteria 3611
87 Ga0395905_0142419 3300037471 Bacteria 2255
88 Ga0436364_0413139 3300037853 Bacteria 254582
89 Ga0436364_0530951 3300037853 Bacteria 215117
90 Ga0395901_0001947 3300038443 Bacteria 21253
91 Ga0439445_0018737 3300042004 Bacteria 1721
92 Ga0450920_005014 3300042122 Bacteria 2346
93 Ga0451577_0074394 3300042876 Bacteria 3030
94 Ga0453684_0027041 3300044712 Bacteria 8250
95 Ga0451576_0132454 3300045051 Bacteria 2599
96 Ga0495629_0120496 3300046459 Bacteria 1828
97 Ga0495662_0004013 3300046476 Bacteria 7417
98 Ga0495610_0000502 3300046512 Bacteria 39945
99 Ga0495630_0000002 3300046517 Bacteria 1277125
100 Ga0495630_0093181 3300046517 Bacteria 2277
101 Ga0495635_0100948 3300046663 Bacteria 1972
102 Ga0501031_0127755 3300049568 Bacteria 1661
103 Ga0501034_0014413 3300049571 Bacteria 8142
104 Ga0501036_0105250 3300049572 Bacteria 2386
105 Ga0501036_0282356 3300049572 Bacteria 1389
106 Ga0501040_0105063 3300049576 Bacteria 1973
107 Ga0501041_0003879 3300049577 Bacteria 8609
108 Ga0501041_0075377 3300049577 Bacteria 2074
109 Ga0501042_0032365 3300049578 Bacteria 3703
110 Ga0501042_0033360 3300049578 Bacteria 3650
111 Ga0501046_0004778 3300049580 Bacteria 12211
112 Ga0501047_0004710 3300049581 Bacteria 12827
113 Ga0501048_0083060 3300049582 Bacteria 2259
114 Ga0501072_0053869 3300049588 Bacteria 3169
115 Ga0501073_0114469 3300049589 Bacteria 1870
116 Ga0501075_0085776 3300049591 Bacteria 2385
117 Ga0501075_0130164 3300049591 Bacteria 1917
118 Ga0501076_0025277 3300049592 Bacteria 4595
119 Ga0501076_0094520 3300049592 Bacteria 2407
120 Ga0501076_0148239 3300049592 Bacteria 1908
121 Ga0501079_0100480 3300049741 Bacteria 2243
122 Ga0501081_0086491 3300049743 Bacteria 2201
123 Ga0501081_0088147 3300049743 Bacteria 2180
124 Ga0501035_0024060 3300049822 Bacteria 5588
125 Ga0501044_0108053 3300049823 Bacteria 2793
126 Ga0501044_0340796 3300049823 Bacteria 1420
127 Ga0501045_0069154 3300049824 Bacteria 2595
128 Ga0501045_0087398 3300049824 Bacteria 2302
129 nmdc:mga00v17_194626_c1 3300050491 Bacteria 1310
130 nmdc:mga00v17_55017_c1 3300050491 Bacteria 2429
131 nmdc:mga0k408_102230_c1 3300050493 Bacteria 1690
132 nmdc:mga0k408_11073_c1 3300050493 Bacteria 4900
133 nmdc:mga06z11_35949_c1 3300050494 Bacteria 2441
134 nmdc:mga06z11_84937_c1 3300050494 Bacteria 1707
135 nmdc:mga06z11_9652_c1 3300050494 Bacteria 4075
136 nmdc:mga05p37_44801_c1 3300050507 Bacteria 5442
137 nmdc:mga05p37_616_c1 3300050507 Bacteria 39333
138 nmdc:mga0qj67_140953_c1 3300050509 Bacteria 1955
139 nmdc:mga0qj67_226564_c1 3300050509 Bacteria 1517
140 nmdc:mga06r32_86059_c1 3300050510 Bacteria 3066
141 Ga0500641_0002706 3300053096 Bacteria 6260
142 Ga0500568_0001146 3300053139 Bacteria 17767
143 Ga0590071_001453 3300059421 Bacteria 6248
144 Ga0590075_000800 3300059424 Bacteria 8298
145 Ga0501082_0129204 3300060353 Bacteria 2192
146 Ga0501082_0237561 3300060353 Bacteria 1586
147 Ga0530510_0031479 3300061734 Bacteria 3814

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050509 nmdc:mga0qj67_226564_c1 nmdc:mga0qj67_226564_c1_16_1164 338
2 3300026142 Ga0207698_10056380 Ga0207698_100563802 360
3 3300032126 Ga0307415_100149037 Ga0307415_1001490372 365
4 3300050491 nmdc:mga00v17_194626_c1 nmdc:mga00v17_194626_c1_182_1300 365
5 3300006846 Ga0075430_100026763 Ga0075430_1000267634 370
6 3300015261 Ga0182006_1000068 Ga0182006_100006862 371
7 3300017792 Ga0163161_10000858 Ga0163161_1000085814 371
8 3300032004 Ga0307414_10091037 Ga0307414_100910372 371
9 3300046512 Ga0495610_0000502 Ga0495610_0000502_5858_7177 371
10 3300042876 Ga0451577_0074394 Ga0451577_0074394_1368_2645 373
11 3300032002 Ga0307416_100082175 Ga0307416_1000821751 375
12 3300049568 Ga0501031_0127755 Ga0501031_0127755_415_1641 375
13 3300049577 Ga0501041_0003879 Ga0501041_0003879_4057_5283 375
14 3300049578 Ga0501042_0032365 Ga0501042_0032365_527_1753 375
15 3300049743 Ga0501081_0088147 Ga0501081_0088147_142_1368 375
16 3300049824 Ga0501045_0069154 Ga0501045_0069154_1284_2510 375
17 3300061734 Ga0530510_0031479 Ga0530510_0031479_2037_3263 375
18 3300059421 Ga0590071_001453 Ga0590071_001453_1601_2905 376
19 3300059424 Ga0590075_000800 Ga0590075_000800_4446_5750 376
20 3300009147 Ga0114129_10004422 Ga0114129_100044227 379
21 3300042122 Ga0450920_005014 Ga0450920_005014_210_1523 379
22 3300044712 Ga0453684_0027041 Ga0453684_0027041_2880_4196 380
23 3300049572 Ga0501036_0282356 Ga0501036_0282356_15_1319 380
24 3300049592 Ga0501076_0025277 Ga0501076_0025277_1846_3150 380
25 3300049592 Ga0501076_0094520 Ga0501076_0094520_906_2210 380
26 3300006844 Ga0075428_100023559 Ga0075428_1000235595 381
27 3300006846 Ga0075430_100048235 Ga0075430_1000482351 381
28 3300006847 Ga0075431_100056716 Ga0075431_1000567163 381
29 3300050507 nmdc:mga05p37_44801_c1 nmdc:mga05p37_44801_c1_1692_2987 381
30 3300050509 nmdc:mga0qj67_140953_c1 nmdc:mga0qj67_140953_c1_122_1417 381
31 3300050510 nmdc:mga06r32_86059_c1 nmdc:mga06r32_86059_c1_1712_3031 381
32 3300006846 Ga0075430_100016364 Ga0075430_1000163644 382
33 3300009147 Ga0114129_10044254 Ga0114129_100442543 382
34 3300049576 Ga0501040_0105063 Ga0501040_0105063_125_1426 382
35 3300050507 nmdc:mga05p37_616_c1 nmdc:mga05p37_616_c1_22320_23639 382
36 3300013307 Ga0157372_10154008 Ga0157372_101540081 383
37 3300013105 Ga0157369_10000033 Ga0157369_10000033123 385
38 3300046476 Ga0495662_0004013 Ga0495662_0004013_5836_7173 389
39 3300046517 Ga0495630_0000002 Ga0495630_0000002_951104_952441 389
40 3300005466 Ga0070685_10128987 Ga0070685_101289872 390
41 3300005543 Ga0070672_100194338 Ga0070672_1001943381 390
42 3300009148 Ga0105243_10211492 Ga0105243_102114922 390
43 3300026089 Ga0207648_10138041 Ga0207648_101380412 390
44 3300006178 Ga0075367_10058355 Ga0075367_100583552 391
45 3300006195 Ga0075366_10007084 Ga0075366_100070844 391
46 3300009098 Ga0105245_10036082 Ga0105245_100360822 391
47 3300009177 Ga0105248_10063251 Ga0105248_100632514 391
48 3300013307 Ga0157372_10341599 Ga0157372_103415992 391
49 3300025903 Ga0207680_10149329 Ga0207680_101493291 391
50 3300026118 Ga0207675_100029083 Ga0207675_1000290832 391
51 3300049580 Ga0501046_0004778 Ga0501046_0004778_5301_6623 391
52 3300049581 Ga0501047_0004710 Ga0501047_0004710_8657_9979 391
53 3300049822 Ga0501035_0024060 Ga0501035_0024060_3972_5294 391
54 3300050493 nmdc:mga0k408_11073_c1 nmdc:mga0k408_11073_c1_2063_3259 391
55 3300050494 nmdc:mga06z11_84937_c1 nmdc:mga06z11_84937_c1_459_1655 391
56 3300005563 Ga0068855_100088853 Ga0068855_1000888532 392
57 3300013105 Ga0157369_10112494 Ga0157369_101124943 392
58 3300013307 Ga0157372_10051914 Ga0157372_100519144 392
59 3300020069 Ga0197907_11300679 Ga0197907_113006791 392
60 3300020070 Ga0206356_10570266 Ga0206356_105702661 392
61 3300020078 Ga0206352_10475408 Ga0206352_104754081 392
62 3300025949 Ga0207667_10058913 Ga0207667_100589137 392
63 3300049591 Ga0501075_0130164 Ga0501075_0130164_121_1416 392
64 3300049743 Ga0501081_0086491 Ga0501081_0086491_709_2004 392
65 3300049823 Ga0501044_0108053 Ga0501044_0108053_1011_2297 392
66 3300060353 Ga0501082_0129204 Ga0501082_0129204_387_1682 392
67 3300005435 Ga0070714_100048646 Ga0070714_1000486461 393
68 3300005614 Ga0068856_100068758 Ga0068856_1000687582 393
69 3300009093 Ga0105240_10024732 Ga0105240_100247324 393
70 3300013105 Ga0157369_10137694 Ga0157369_101376942 393
71 3300013307 Ga0157372_10007535 Ga0157372_100075352 393
72 3300013307 Ga0157372_10155255 Ga0157372_101552552 393
73 3300022467 Ga0224712_10050783 Ga0224712_100507831 393
74 3300025913 Ga0207695_10000126 Ga0207695_10000126163 393
75 3300026078 Ga0207702_10357879 Ga0207702_103578791 393
76 3300031901 Ga0307406_10084942 Ga0307406_100849422 393
77 3300031903 Ga0307407_10004067 Ga0307407_100040674 393
78 3300037471 Ga0395905_0142419 Ga0395905_0142419_460_1761 393
79 3300049572 Ga0501036_0105250 Ga0501036_0105250_363_1628 393
80 3300049577 Ga0501041_0075377 Ga0501041_0075377_408_1673 393
81 3300049578 Ga0501042_0033360 Ga0501042_0033360_1821_3086 393
82 3300049582 Ga0501048_0083060 Ga0501048_0083060_775_2040 393
83 3300049588 Ga0501072_0053869 Ga0501072_0053869_464_1729 393
84 3300049591 Ga0501075_0085776 Ga0501075_0085776_564_1829 393
85 3300049592 Ga0501076_0148239 Ga0501076_0148239_307_1572 393
86 3300049741 Ga0501079_0100480 Ga0501079_0100480_717_2027 393
87 3300049824 Ga0501045_0087398 Ga0501045_0087398_870_2180 393
88 3300060353 Ga0501082_0237561 Ga0501082_0237561_258_1523 393
89 3300005617 Ga0068859_100171125 Ga0068859_1001711252 394
90 3300005843 Ga0068860_100063005 Ga0068860_1000630053 394
91 3300006931 Ga0097620_100171123 Ga0097620_1001711232 394
92 3300021388 Ga0213875_10000022 Ga0213875_10000022168 394
93 3300021388 Ga0213875_10000096 Ga0213875_1000009642 394
94 3300028381 Ga0268264_10037466 Ga0268264_100374665 394
95 3300031090 Ga0265760_10003986 Ga0265760_100039863 394
96 3300031731 Ga0307405_10139470 Ga0307405_101394701 394
97 3300031995 Ga0307409_100186819 Ga0307409_1001868191 394
98 3300037853 Ga0436364_0413139 Ga0436364_0413139_50807_52123 394
99 3300037853 Ga0436364_0530951 Ga0436364_0530951_9627_11066 394
100 3300006051 Ga0075364_10008497 Ga0075364_100084974 395
101 3300006178 Ga0075367_10094521 Ga0075367_100945211 395
102 3300009093 Ga0105240_10000309 Ga0105240_1000030959 395
103 3300025913 Ga0207695_10003095 Ga0207695_100030954 395
104 3300031995 Ga0307409_100149981 Ga0307409_1001499811 395
105 3300037312 Ga0395899_0016171 Ga0395899_0016171_1553_2872 395
106 3300037471 Ga0395905_0058291 Ga0395905_0058291_505_1824 395
107 3300038443 Ga0395901_0001947 Ga0395901_0001947_18860_20179 395
108 3300042004 Ga0439445_0018737 Ga0439445_0018737_297_1604 395
109 3300045051 Ga0451576_0132454 Ga0451576_0132454_369_1682 395
110 3300049571 Ga0501034_0014413 Ga0501034_0014413_2709_4010 395
111 3300049823 Ga0501044_0340796 Ga0501044_0340796_31_1332 395
112 3300050491 nmdc:mga00v17_55017_c1 nmdc:mga00v17_55017_c1_671_1978 395
113 3300050493 nmdc:mga0k408_102230_c1 nmdc:mga0k408_102230_c1_77_1384 395
114 3300053139 Ga0500568_0001146 Ga0500568_0001146_12496_13803 395
115 3300005548 Ga0070665_100000213 Ga0070665_10000021347 396
116 3300028379 Ga0268266_10000235 Ga0268266_1000023550 396
117 3300032126 Ga0307415_100112929 Ga0307415_1001129292 396
118 3300049589 Ga0501073_0114469 Ga0501073_0114469_26_1318 396
119 3300053096 Ga0500641_0002706 Ga0500641_0002706_3493_4797 396
120 3300005331 Ga0070670_100050270 Ga0070670_1000502702 397
121 3300005354 Ga0070675_100312167 Ga0070675_1003121671 397
122 3300005444 Ga0070694_100102236 Ga0070694_1001022362 397
123 3300005456 Ga0070678_100097817 Ga0070678_1000978171 397
124 3300005549 Ga0070704_100014540 Ga0070704_1000145402 397
125 3300005564 Ga0070664_100234314 Ga0070664_1002343141 397
126 3300005615 Ga0070702_100018220 Ga0070702_1000182201 397
127 3300005618 Ga0068864_100288120 Ga0068864_1002881202 397
128 3300006048 Ga0075363_100073169 Ga0075363_1000731692 397
129 3300006051 Ga0075364_10008497 Ga0075364_100084975 397
130 3300006177 Ga0075362_10023152 Ga0075362_100231522 397
131 3300006178 Ga0075367_10038119 Ga0075367_100381192 397
132 3300006178 Ga0075367_10128445 Ga0075367_101284451 397
133 3300006195 Ga0075366_10018355 Ga0075366_100183553 397
134 3300009101 Ga0105247_10043356 Ga0105247_100433562 397
135 3300013308 Ga0157375_10126569 Ga0157375_101265692 397
136 3300014325 Ga0163163_10187879 Ga0163163_101878792 397
137 3300025900 Ga0207710_10023725 Ga0207710_100237252 397
138 3300025926 Ga0207659_10142724 Ga0207659_101427242 397
139 3300025931 Ga0207644_10075012 Ga0207644_100750122 397
140 3300025933 Ga0207706_10093739 Ga0207706_100937392 397
141 3300025937 Ga0207669_10031526 Ga0207669_100315263 397
142 3300025940 Ga0207691_10116005 Ga0207691_101160052 397
143 3300026121 Ga0207683_10066304 Ga0207683_100663043 397
144 3300046459 Ga0495629_0120496 Ga0495629_0120496_313_1629 397
145 3300046517 Ga0495630_0093181 Ga0495630_0093181_25_1341 397
146 3300046663 Ga0495635_0100948 Ga0495635_0100948_206_1522 397
147 3300050494 nmdc:mga06z11_35949_c1 nmdc:mga06z11_35949_c1_503_1807 397
148 3300050494 nmdc:mga06z11_9652_c1 nmdc:mga06z11_9652_c1_434_1663 397
149 3300053096 Ga0500641_0002706 Ga0500641_0002706_2001_3341 397
150 3300053139 Ga0500568_0001146 Ga0500568_0001146_11155_12384 397
151 iso_pu_bacteria 2684623219 2687238335 397

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

229

367

0.93

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

86

221

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bvk-assembly2.cif.gz_B udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p212121) 0.8472 16 358
7bvj-assembly4.cif.gz_D udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.8345 16 358
7bvk-assembly2.cif.gz_B udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p212121) 0.8265 16 358
3ip3-assembly4.cif.gz_G structure of putative oxidoreductase (tm_0425) from thermotoga maritima 0.8233 17 365
3rcb-assembly1.cif.gz_A crystal structure of the k102e mutant of kijd10, a 3-ketoreductase from actinomadura kijaniata in complex with tdp-benzene and nadp 0.8213 16 358
ID Description Score Start End Superfamily
af_Q54KI6_15_151_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8527 16 156 3.40.50.720
1zh8B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8456 16 139 3.40.50.720
3e18B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8455 16 150 3.40.50.720
af_F1R9L8_3_129_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8442 16 151 3.40.50.720
af_Q2G1E6_2_122_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8432 17 149 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7D8YHR0-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9871 11 234 GO:0000166
AF-A0A382KBV6-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.9866 13 122 GO:0000166
AF-A0A3D6A6U6-F1-model_v4 Oxidoreductase 0.9839 45 397 GO:0000166
GO:0016491
AF-A0A7C1KIV2-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9822 16 240 GO:0000166
AF-A0A1B2Z274-F1-model_v4 Oxidoreductase 0.982 47 397 GO:0000166
GO:0016491

Feature Viewer

pLDDT pTM Quality
93.33 0.92 High
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Predicted Structure (AlphaFold2)

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