F212040

General Info

Members Datasets Scaffolds Average Seq Length
151 105 302 418

Family's Representative Sequence

Representative Sequence 3300031903|Ga0307407_10069640|Ga0307407_100696403
Length 492
Sequence MDERSTLGETAWKSPKMHGRKNPKSGESRPPTPPAEHAPSGQTANAGGSERPNQGPPAESRRDARACAYAVVRRVFEEGAYADRALHAEAEGLAPRDRGLATRLAYGVVQRKATLDHVIQTLARRPTAKLEPAVLAALRLGVFQLAFMDRVPAHAAVGETVELAKRHSRRGAGLVNAVLRRAVKEARPMIDGLPDRTPAEAALRHSHPIWIAELWFDQLGAGAARALMAANNEPAEAAIRANTLKTTAAALAAQLPAEPADLPDALLLTSPFDAFASPLWHEGLFMPQSRAAQAVSRALDPQPGERVLDLCAAPGAKTTHLAALMGNRGEVTAVERHPGRAEALVRTAARMGAENVTVRVRDAAQPVEDTYDRILVDPPCSDLGTLAARPDARWRKEPHNVDELAALQARILDSAAAALAPGGTMVYSTCTISPRENEGQIEAFLGRHADFQLADMPSDVPVWDHPTVPRVRQTLPHRDRTDGFFIARMRRT

Samples

Sample ID Description Type Environment
1 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
47 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
48 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
51 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
52 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
53 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
54 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
55 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
58 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
59 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
60 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
61 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
62 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
63 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
64 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
65 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
66 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
67 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
68 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
69 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
70 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
71 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
84 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
85 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
86 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
87 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
88 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
89 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
90 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
91 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
92 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
95 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
97 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
98 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
99 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
100 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
101 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
103 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
104 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
105 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.32
Nodule 0
Rhizoplane 3.97
Rhizosphere 92.72
Stem 0
Stem Tuber 0
Unclassified 1.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307407_10069640 3300031903 Bacteria 2089
2 JGI25406J46586_10008866 3300003203 Bacteria 4526
3 Ga0070658_10218088 3300005327 Bacteria 1613
4 Ga0070683_100024388 3300005329 Bacteria 5417
5 Ga0070659_100072607 3300005366 Bacteria 2738
6 Ga0070714_100167630 3300005435 Bacteria 1991
7 Ga0070713_100210093 3300005436 Unclassified 1762
8 Ga0070710_10048271 3300005437 Bacteria 2378
9 Ga0070681_10249602 3300005458 Bacteria 1687
10 Ga0070684_100297003 3300005535 Unclassified 1482
11 Ga0070704_100018069 3300005549 Bacteria 4499
12 Ga0068855_100010682 3300005563 Bacteria 11079
13 Ga0068857_100247076 3300005577 Bacteria 1635
14 Ga0068854_100151065 3300005578 Bacteria 1791
15 Ga0068854_100249192 3300005578 Bacteria 1417
16 Ga0068856_100020722 3300005614 Bacteria 6387
17 Ga0068856_100212758 3300005614 Bacteria 1948
18 Ga0068852_100157370 3300005616 Bacteria 2118
19 Ga0068860_100126688 3300005843 Bacteria 2447
20 Ga0081538_10000103 3300005981 Bacteria 83685
21 Ga0081539_10000479 3300005985 Bacteria 84481
22 Ga0070717_10002745 3300006028 Bacteria 12439
23 Ga0070717_10013144 3300006028 Bacteria 6328
24 Ga0070712_100181102 3300006175 Bacteria 1642
25 Ga0075428_100054617 3300006844 Bacteria 4377
26 Ga0075430_100020488 3300006846 Bacteria 5626
27 Ga0075431_100021477 3300006847 Bacteria 6602
28 Ga0075431_100166625 3300006847 Bacteria 2265
29 Ga0075433_10111707 3300006852 Unclassified 2425
30 Ga0075434_100027354 3300006871 Bacteria 5599
31 Ga0075429_100034009 3300006880 Bacteria 4428
32 Ga0075436_100002085 3300006914 Bacteria 13801
33 Ga0075435_100003355 3300007076 Bacteria 10853
34 Ga0075435_100076207 3300007076 Bacteria 2748
35 Ga0105240_10092930 3300009093 Bacteria 3682
36 Ga0111539_10143323 3300009094 Bacteria 2797
37 Ga0111539_10145021 3300009094 Bacteria 2780
38 Ga0105245_10054287 3300009098 Bacteria 3598
39 Ga0114129_10027786 3300009147 Bacteria 8011
40 Ga0114129_10171882 3300009147 Bacteria 2954
41 Ga0105243_10085597 3300009148 Bacteria 2584
42 Ga0105238_10222896 3300009551 Bacteria 1862
43 Ga0157374_10129406 3300013296 Bacteria 2442
44 Ga0157372_10288313 3300013307 Bacteria 1909
45 Ga0213875_10010450 3300021388 Bacteria 4643
46 Ga0207688_10090809 3300025901 Bacteria 1754
47 Ga0207661_10282668 3300025944 Bacteria 1483
48 Ga0207679_10099498 3300025945 Bacteria 2271
49 Ga0207640_10189150 3300025981 Bacteria 1550
50 Ga0207639_10156306 3300026041 Bacteria 1916
51 Ga0207702_10009834 3300026078 Bacteria 8016
52 Ga0207698_10120827 3300026142 Bacteria 2217
53 Ga0265338_10113701 3300028800 Bacteria 2174
54 Ga0307407_10069959 3300031903 Bacteria 2085
55 Ga0307415_100018198 3300032126 Bacteria 4236
56 Ga0373937_0091731 3300036401 Bacteria 2815
57 Ga0373937_0196425 3300036401 Bacteria 1896
58 Ga0395898_0001796 3300037466 Bacteria 27829
59 Ga0436364_0092125 3300037853 Bacteria 20471
60 Ga0436364_0737248 3300037853 Bacteria 154680
61 Ga0466969_0008521 3300044656 Bacteria 5441
62 Ga0466969_0035033 3300044656 Bacteria 2541
63 Ga0466969_0046321 3300044656 Bacteria 2157
64 Ga0466972_0063292 3300044658 Bacteria 1772
65 Ga0466965_0051143 3300044683 Bacteria 2050
66 Ga0466966_0046847 3300044684 Bacteria 2759
67 Ga0466966_0069284 3300044684 Bacteria 2213
68 Ga0466961_0008019 3300044693 Bacteria 6730
69 Ga0466963_0000505 3300044694 Bacteria 18196
70 Ga0466963_0004174 3300044694 Bacteria 8363
71 Ga0466963_0039569 3300044694 Bacteria 3088
72 Ga0466968_0040670 3300044735 Bacteria 1961
73 Ga0466957_0004062 3300044842 Bacteria 8099
74 Ga0466957_0023075 3300044842 Bacteria 3675
75 Ga0466957_0071040 3300044842 Bacteria 2152
76 Ga0466960_0024142 3300044901 Bacteria 2740
77 Ga0466960_0131230 3300044901 Bacteria 1322
78 Ga0466959_0001552 3300045049 Bacteria 14126
79 Ga0466959_0013296 3300045049 Bacteria 5962
80 Ga0466959_0024122 3300045049 Bacteria 4503
81 Ga0466959_0026372 3300045049 Bacteria 4307
82 Ga0466959_0110920 3300045049 Bacteria 1958
83 Ga0466959_0217495 3300045049 Bacteria 1326
84 Ga0466958_0000538 3300045836 Bacteria 16073
85 Ga0466958_0004963 3300045836 Bacteria 7096
86 Ga0466958_0023666 3300045836 Bacteria 3608
87 Ga0466967_0003691 3300045976 Bacteria 10078
88 Ga0466967_0016472 3300045976 Bacteria 5831
89 Ga0466967_0035295 3300045976 Bacteria 4254
90 Ga0466967_0044954 3300045976 Bacteria 3835
91 Ga0466967_0086915 3300045976 Bacteria 2834
92 Ga0466967_0106662 3300045976 Bacteria 2568
93 Ga0466967_0174332 3300045976 Bacteria 2025
94 Ga0495652_0073575 3300046529 Bacteria 2845
95 Ga0495676_0049680 3300047321 Bacteria 3370
96 Ga0495680_0052901 3300047322 Bacteria 3163
97 Ga0496104_0149716 3300048907 Bacteria 2241
98 Ga0496105_0159128 3300048908 Bacteria 1854
99 Ga0496108_0043069 3300048911 Bacteria 3770
100 Ga0496112_0037266 3300048915 Bacteria 4747
101 Ga0496115_0005880 3300048918 Bacteria 8943
102 Ga0496115_0118441 3300048918 Bacteria 2178
103 Ga0501031_0059402 3300049568 Bacteria 2492
104 Ga0501033_0043606 3300049570 Bacteria 3340
105 Ga0501034_0250494 3300049571 Bacteria 1715
106 Ga0501036_0074421 3300049572 Bacteria 2872
107 Ga0501036_0162444 3300049572 Bacteria 1883
108 Ga0501038_0009400 3300049574 Bacteria 8970
109 Ga0501038_0033214 3300049574 Bacteria 4546
110 Ga0501039_0003230 3300049575 Bacteria 12191
111 Ga0501039_0025237 3300049575 Bacteria 4566
112 Ga0501039_0075768 3300049575 Bacteria 2615
113 Ga0501039_0132605 3300049575 Bacteria 1955
114 Ga0501040_0031077 3300049576 Bacteria 3608
115 Ga0501041_0062412 3300049577 Bacteria 2281
116 Ga0501042_0010053 3300049578 Bacteria 6326
117 Ga0501042_0040060 3300049578 Bacteria 3331
118 Ga0501043_0023290 3300049579 Bacteria 4856
119 Ga0501046_0011886 3300049580 Bacteria 7428
120 Ga0501046_0041270 3300049580 Bacteria 3683
121 Ga0501048_0009062 3300049582 Bacteria 7490
122 Ga0501048_0038243 3300049582 Bacteria 3444
123 Ga0501067_0009277 3300049583 Bacteria 5450
124 Ga0501068_0071861 3300049584 Bacteria 2112
125 Ga0501069_0005687 3300049585 Bacteria 6493
126 Ga0501069_0006873 3300049585 Bacteria 5950
127 Ga0501070_0030714 3300049586 Bacteria 4500
128 Ga0501071_0050349 3300049587 Bacteria 3001
129 Ga0501071_0094818 3300049587 Bacteria 2196
130 Ga0501072_0010843 3300049588 Bacteria 6947
131 Ga0501072_0036861 3300049588 Bacteria 3835
132 Ga0501074_0018946 3300049590 Bacteria 5000
133 Ga0501074_0049422 3300049590 Bacteria 3036
134 Ga0501076_0042682 3300049592 Bacteria 3571
135 Ga0501080_0038736 3300049742 Bacteria 4449
136 Ga0501081_0012490 3300049743 Bacteria 5584
137 Ga0501035_0010786 3300049822 Bacteria 8462
138 nmdc:mga09592_20187_c1 3300050508 Bacteria 5476
139 nmdc:mga0qj67_306398_c1 3300050509 Bacteria 1287
140 nmdc:mga08y16_112439_c1 3300050511 Bacteria 2835
141 nmdc:mga0n895_6404_c1 3300050512 Bacteria 9989
142 nmdc:mga0rr50_7282_c1 3300050513 Bacteria 6809
143 nmdc:mga08x19_19783_c1 3300050514 Bacteria 4137
144 Ga0500556_0000279 3300053104 Bacteria 40113
145 Ga0500616_0010167 3300053153 Bacteria 5648
146 Ga0501084_0096718 3300054114 Bacteria 2479
147 Ga0501084_0099608 3300054114 Bacteria 2440
148 Ga0501082_0015933 3300060353 Bacteria 6465
149 Ga0466962_0001913 3300061719 Bacteria 9801
150 Ga0466962_0062262 3300061719 Bacteria 1781
151 Ga0530510_0070296 3300061734 Bacteria 2541
152 Ga0307407_10069640
153 JGI25406J46586_10008866
154 Ga0070658_10218088
155 Ga0070683_100024388
156 Ga0070659_100072607
157 Ga0070714_100167630
158 Ga0070713_100210093
159 Ga0070710_10048271
160 Ga0070681_10249602
161 Ga0070684_100297003
162 Ga0070704_100018069
163 Ga0068855_100010682
164 Ga0068857_100247076
165 Ga0068854_100151065
166 Ga0068854_100249192
167 Ga0068856_100020722
168 Ga0068856_100212758
169 Ga0068852_100157370
170 Ga0068860_100126688
171 Ga0081538_10000103
172 Ga0081539_10000479
173 Ga0070717_10002745
174 Ga0070717_10013144
175 Ga0070712_100181102
176 Ga0075428_100054617
177 Ga0075430_100020488
178 Ga0075431_100021477
179 Ga0075431_100166625
180 Ga0075433_10111707
181 Ga0075434_100027354
182 Ga0075429_100034009
183 Ga0075436_100002085
184 Ga0075435_100003355
185 Ga0075435_100076207
186 Ga0105240_10092930
187 Ga0111539_10143323
188 Ga0111539_10145021
189 Ga0105245_10054287
190 Ga0114129_10027786
191 Ga0114129_10171882
192 Ga0105243_10085597
193 Ga0105238_10222896
194 Ga0157374_10129406
195 Ga0157372_10288313
196 Ga0213875_10010450
197 Ga0207688_10090809
198 Ga0207661_10282668
199 Ga0207679_10099498
200 Ga0207640_10189150
201 Ga0207639_10156306
202 Ga0207702_10009834
203 Ga0207698_10120827
204 Ga0265338_10113701
205 Ga0307407_10069959
206 Ga0307415_100018198
207 Ga0373937_0091731
208 Ga0373937_0196425
209 Ga0395898_0001796
210 Ga0436364_0092125
211 Ga0436364_0737248
212 Ga0466969_0008521
213 Ga0466969_0035033
214 Ga0466969_0046321
215 Ga0466972_0063292
216 Ga0466965_0051143
217 Ga0466966_0046847
218 Ga0466966_0069284
219 Ga0466961_0008019
220 Ga0466963_0000505
221 Ga0466963_0004174
222 Ga0466963_0039569
223 Ga0466968_0040670
224 Ga0466957_0004062
225 Ga0466957_0023075
226 Ga0466957_0071040
227 Ga0466960_0024142
228 Ga0466960_0131230
229 Ga0466959_0001552
230 Ga0466959_0013296
231 Ga0466959_0024122
232 Ga0466959_0026372
233 Ga0466959_0110920
234 Ga0466959_0217495
235 Ga0466958_0000538
236 Ga0466958_0004963
237 Ga0466958_0023666
238 Ga0466967_0003691
239 Ga0466967_0016472
240 Ga0466967_0035295
241 Ga0466967_0044954
242 Ga0466967_0086915
243 Ga0466967_0106662
244 Ga0466967_0174332
245 Ga0495652_0073575
246 Ga0495676_0049680
247 Ga0495680_0052901
248 Ga0496104_0149716
249 Ga0496105_0159128
250 Ga0496108_0043069
251 Ga0496112_0037266
252 Ga0496115_0005880
253 Ga0496115_0118441
254 Ga0501031_0059402
255 Ga0501033_0043606
256 Ga0501034_0250494
257 Ga0501036_0074421
258 Ga0501036_0162444
259 Ga0501038_0009400
260 Ga0501038_0033214
261 Ga0501039_0003230
262 Ga0501039_0025237
263 Ga0501039_0075768
264 Ga0501039_0132605
265 Ga0501040_0031077
266 Ga0501041_0062412
267 Ga0501042_0010053
268 Ga0501042_0040060
269 Ga0501043_0023290
270 Ga0501046_0011886
271 Ga0501046_0041270
272 Ga0501048_0009062
273 Ga0501048_0038243
274 Ga0501067_0009277
275 Ga0501068_0071861
276 Ga0501069_0005687
277 Ga0501069_0006873
278 Ga0501070_0030714
279 Ga0501071_0050349
280 Ga0501071_0094818
281 Ga0501072_0010843
282 Ga0501072_0036861
283 Ga0501074_0018946
284 Ga0501074_0049422
285 Ga0501076_0042682
286 Ga0501080_0038736
287 Ga0501081_0012490
288 Ga0501035_0010786
289 nmdc:mga09592_20187_c1
290 nmdc:mga0qj67_306398_c1
291 nmdc:mga08y16_112439_c1
292 nmdc:mga0n895_6404_c1
293 nmdc:mga0rr50_7282_c1
294 nmdc:mga08x19_19783_c1
295 Ga0500556_0000279
296 Ga0500616_0010167
297 Ga0501084_0096718
298 Ga0501084_0099608
299 Ga0501082_0015933
300 Ga0466962_0001913
301 Ga0466962_0062262
302 Ga0530510_0070296

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01189

Methyltr_RsmB-F

16S rRNA methyltransferase RsmB/F

296

490

0.98

PF01029

NusB

NusB family

62

184

0.97

PF01135

PCMT

Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)

286

383

0.91

PF22458

RsmF-B_ferredox

Methyltr_RsmF/B-like, ferredoxin-like domain

207

274

0.87

PF13847

Methyltransf_31

Methyltransferase domain

301

456

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4eya-assembly1.cif.gz_A crystal structure of a plectonemic rna supercoil 0.9172 2 119
8fky-assembly1.cif.gz_SY human nucleolar pre-60s ribosomal subunit (state f) 0.9104 135 398
8i9z-assembly1.cif.gz_CP cryo-em structure of a chaetomium thermophilum pre-60s ribosomal subunit - state spb4 0.9099 135 398
3m6w-assembly1.cif.gz_A multi-site-specific 16s rrna methyltransferase rsmf from thermus thermophilus in space group p21212 in complex with s-adenosyl-l-methionine 0.9089 145 398
5zvh-assembly2.cif.gz_A the crystal structure of nsun6 from pyrococcus horikoshii with sfg 0.8971 150 398
ID Description Score Start End Superfamily
2yxlA04 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9301 227 396 3.40.50.150
af_P9WGX3_13_148_1.10.940.10 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.93 2 128 1.10.940.10
4eyaA00 Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like 0.9172 2 119 1.10.940.10
af_P40991_338_614_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.908 237 398 3.40.50.150
af_I1JJK1_227_330_3.30.70.1170 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Sun protein; domain 3 0.9065 134 230 3.30.70.1170
ID Description Score Start End GO Terms
AF-A0A354T8B7-F1-model_v4 RNA methyltransferase 0.9722 281 398 GO:0001510
GO:0003723
GO:0008173
AF-A0A3B8KLT1-F1-model_v4 deleted 0.965 2 121
AF-W1V5P4-F1-model_v4 Sun protein 0.9634 3 122 GO:0003723
GO:0031564
AF-A0A847IGV3-F1-model_v4 rRNA small subunit methyltransferase B 0.9563 2 119 GO:0003723
GO:0006355
GO:0008168
GO:0032259
AF-A0A7V9JFQ1-F1-model_v4 16S rRNA (Cytosine(967)-C(5))-methyltransferase RsmB 0.9558 269 398 GO:0001510
GO:0003723
GO:0008173

Map