F212004

General Info

Members Datasets Scaffolds Average Seq Length
151 66 302 224

Family's Representative Sequence

Representative Sequence 3300031711|Ga0265314_10076129|Ga0265314_100761293
Length 247
Sequence LSTEDTEATEKSFGFPDSVCSVCAVGNNWTAQPIFFVDFEGSRTSGVLEYGVATLFEGRIVEAHTRLCRAVGRVRPEDAAVHGLREEALAAHAPFADDWEFFASLRERGPLAAHYAGVENALLKSVWPYPRNSPDFARPGERVIEWGPWIDSARLYAQLYPRLDSGRLESLVAAGGLQAELDALAVTYCPPDRRRYHAALYDALAGALLLGSLARDPQLARLTTMQLLALSTLDGEKRDALQQRELF

Samples

Sample ID Description Type Environment
1 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
11 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
12 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
13 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
18 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
19 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
20 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
21 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
22 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
23 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
24 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
25 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
26 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
27 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
28 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
29 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
30 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
31 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
32 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
33 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
34 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
35 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
36 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
37 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
38 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
39 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
40 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
41 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
42 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
43 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
44 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
45 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
46 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
47 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
48 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
49 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
50 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
51 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
52 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
53 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
54 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
56 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
57 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
63 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
64 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
65 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.01
Stem 0
Stem Tuber 0
Unclassified 11.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265314_10076129 3300031711 Bacteria 2230
2 rootL2_10143375 3300003322 Bacteria 2493
3 rootH1_10048114 3300003323 Bacteria 2224
4 Ga0070683_100026176 3300005329 Bacteria 5248
5 Ga0070670_100400669 3300005331 Unclassified 1211
6 Ga0070713_100064820 3300005436 Bacteria 3067
7 Ga0070679_100018700 3300005530 Bacteria 6726
8 Ga0070684_100230488 3300005535 Unclassified 1691
9 Ga0068856_100251771 3300005614 Bacteria 1781
10 Ga0105240_10540520 3300009093 Unclassified 1290
11 Ga0157369_10287486 3300013105 Unclassified 1712
12 Ga0163163_10117239 3300014325 Unclassified 2694
13 Ga0207652_10012871 3300025921 Bacteria 6766
14 Ga0207700_10067626 3300025928 Bacteria 2736
15 Ga0207661_10004682 3300025944 Bacteria 9582
16 Ga0207702_10148713 3300026078 Unclassified 2128
17 Ga0265337_1002510 3300028556 Bacteria 8369
18 Ga0265337_1007504 3300028556 Bacteria 4074
19 Ga0265337_1057867 3300028556 Bacteria 1078
20 Ga0265319_1003044 3300028563 Bacteria 8885
21 Ga0265319_1004807 3300028563 Bacteria 6620
22 Ga0265319_1031364 3300028563 Bacteria 1851
23 Ga0265319_1043512 3300028563 Bacteria 1508
24 Ga0265334_10002963 3300028573 Bacteria 7775
25 Ga0265334_10100517 3300028573 Bacteria 1047
26 Ga0265318_10000055 3300028577 Bacteria 114178
27 Ga0265318_10002927 3300028577 Bacteria 8858
28 Ga0265318_10003002 3300028577 Bacteria 8713
29 Ga0265318_10006157 3300028577 Bacteria 5554
30 Ga0265318_10007620 3300028577 Bacteria 4876
31 Ga0265318_10052150 3300028577 Bacteria 1535
32 Ga0265323_10001009 3300028653 Bacteria 14684
33 Ga0265323_10003532 3300028653 Bacteria 6885
34 Ga0265323_10025522 3300028653 Unclassified 2235
35 Ga0265323_10038377 3300028653 Unclassified 1751
36 Ga0265322_10002976 3300028654 Bacteria 5159
37 Ga0265322_10011330 3300028654 Bacteria 2587
38 Ga0265322_10019073 3300028654 Bacteria 1970
39 Ga0265322_10021142 3300028654 Bacteria 1864
40 Ga0265322_10064780 3300028654 Bacteria 1036
41 Ga0265336_10001468 3300028666 Bacteria 10708
42 Ga0307515_10118613 3300028794 Bacteria 3018
43 Ga0265338_10000796 3300028800 Bacteria 53360
44 Ga0265338_10012469 3300028800 Bacteria 9690
45 Ga0265324_10002074 3300029957 Bacteria 10616
46 Ga0265324_10020964 3300029957 Bacteria 2346
47 Ga0265324_10021715 3300029957 Bacteria 2300
48 Ga0265324_10069321 3300029957 Unclassified 1202
49 Ga0265330_10006302 3300031235 Bacteria 5864
50 Ga0265330_10032801 3300031235 Unclassified 2326
51 Ga0265330_10089610 3300031235 Bacteria 1321
52 Ga0265332_10173762 3300031238 Bacteria 899
53 Ga0265328_10016496 3300031239 Bacteria 2872
54 Ga0265328_10021287 3300031239 Bacteria 2477
55 Ga0265320_10000623 3300031240 Bacteria 27119
56 Ga0265320_10001063 3300031240 Bacteria 20332
57 Ga0265320_10002930 3300031240 Bacteria 11691
58 Ga0265320_10006033 3300031240 Bacteria 7692
59 Ga0265320_10011554 3300031240 Bacteria 5188
60 Ga0265320_10028149 3300031240 Bacteria 2920
61 Ga0265320_10037889 3300031240 Bacteria 2425
62 Ga0265320_10060801 3300031240 Bacteria 1802
63 Ga0265325_10012512 3300031241 Bacteria 4851
64 Ga0265325_10037310 3300031241 Bacteria 2570
65 Ga0265325_10065574 3300031241 Bacteria 1833
66 Ga0265325_10125202 3300031241 Unclassified 1236
67 Ga0265329_10012890 3300031242 Bacteria 2994
68 Ga0265340_10007769 3300031247 Bacteria 5816
69 Ga0265340_10040619 3300031247 Bacteria 2291
70 Ga0265340_10048953 3300031247 Unclassified 2054
71 Ga0265339_10073698 3300031249 Bacteria 1815
72 Ga0265339_10122092 3300031249 Bacteria 1338
73 Ga0265331_10003164 3300031250 Bacteria 10750
74 Ga0265331_10005587 3300031250 Bacteria 7571
75 Ga0265331_10005595 3300031250 Bacteria 7560
76 Ga0265327_10003004 3300031251 Bacteria 16743
77 Ga0265327_10003241 3300031251 Bacteria 15803
78 Ga0265327_10037048 3300031251 Bacteria 2675
79 Ga0265316_10001718 3300031344 Bacteria 23247
80 Ga0265316_10051519 3300031344 Bacteria 3233
81 Ga0265316_10097632 3300031344 Unclassified 2236
82 Ga0265316_10120334 3300031344 Unclassified 1983
83 Ga0265316_10165963 3300031344 Bacteria 1649
84 Ga0265316_10177623 3300031344 Bacteria 1586
85 Ga0265316_10210655 3300031344 Bacteria 1437
86 Ga0265316_10424038 3300031344 Bacteria 956
87 Ga0265316_10549491 3300031344 Unclassified 822
88 Ga0265313_10002474 3300031595 Bacteria 15922
89 Ga0265313_10014516 3300031595 Unclassified 4648
90 Ga0265313_10062660 3300031595 Bacteria 1736
91 Ga0265313_10081717 3300031595 Bacteria 1466
92 Ga0265314_10000587 3300031711 Bacteria 45728
93 Ga0265314_10002055 3300031711 Bacteria 21256
94 Ga0265314_10004386 3300031711 Bacteria 13120
95 Ga0265314_10348202 3300031711 Bacteria 816
96 Ga0265342_10019700 3300031712 Bacteria 4343
97 Ga0265342_10036637 3300031712 Bacteria 2996
98 Ga0265342_10042777 3300031712 Bacteria 2735
99 Ga0265342_10053852 3300031712 Bacteria 2393
100 Ga0265342_10058772 3300031712 Bacteria 2272
101 Ga0265342_10060221 3300031712 Bacteria 2239
102 Ga0307413_10715538 3300031824 Bacteria 833
103 Ga0307414_10469219 3300032004 Bacteria 1108
104 Ga0373935_0503662 3300035692 Bacteria 879
105 Ga0395905_0266147 3300037471 Bacteria 1600
106 Ga0395905_0484957 3300037471 Unclassified 1136
107 Ga0451577_0041607 3300042876 Bacteria 4124
108 Ga0451577_0284221 3300042876 Bacteria 1499
109 Ga0451577_0349486 3300042876 Bacteria 1341
110 Ga0453683_0002775 3300044673 Bacteria 13320
111 Ga0453684_0000019 3300044712 Bacteria 908702
112 Ga0453684_0049161 3300044712 Bacteria 5566
113 Ga0453684_0101322 3300044712 Bacteria 3523
114 Ga0466968_0203305 3300044735 Bacteria 928
115 Ga0451576_0005654 3300045051 Bacteria 15613
116 Ga0451576_0110432 3300045051 Bacteria 2862
117 Ga0451576_0147624 3300045051 Bacteria 2452
118 Ga0451576_0316717 3300045051 Bacteria 1632
119 Ga0495636_0128232 3300047318 Unclassified 1127
120 Ga0501031_0033895 3300049568 Bacteria 3332
121 Ga0501032_0001748 3300049569 Bacteria 17137
122 Ga0501032_0031062 3300049569 Bacteria 3663
123 Ga0501033_0000999 3300049570 Bacteria 25735
124 Ga0501033_0005982 3300049570 Bacteria 9542
125 Ga0501034_0159035 3300049571 Bacteria 2231
126 Ga0501037_0021568 3300049573 Bacteria 4762
127 Ga0501038_0000543 3300049574 Bacteria 33109
128 Ga0501038_0569542 3300049574 Bacteria 860
129 Ga0501038_0743344 3300049574 Bacteria 732
130 Ga0501039_0002324 3300049575 Bacteria 14124
131 Ga0501042_0340137 3300049578 Bacteria 1085
132 Ga0501043_0005640 3300049579 Bacteria 10081
133 Ga0501046_0003023 3300049580 Bacteria 15542
134 Ga0501046_0004047 3300049580 Bacteria 13375
135 Ga0501047_0013126 3300049581 Bacteria 7846
136 Ga0501047_0027381 3300049581 Bacteria 5491
137 Ga0501047_0080385 3300049581 Bacteria 3133
138 Ga0501047_0243904 3300049581 Bacteria 1646
139 Ga0501047_0379125 3300049581 Bacteria 1249
140 Ga0501048_0003401 3300049582 Bacteria 12092
141 Ga0501070_0061883 3300049586 Bacteria 3101
142 Ga0501080_0757229 3300049742 Bacteria 854
143 Ga0501083_0002577 3300049744 Bacteria 12468
144 Ga0501083_0060048 3300049744 Bacteria 2541
145 Ga0501035_0000854 3300049822 Bacteria 32460
146 Ga0501035_0007905 3300049822 Bacteria 9933
147 Ga0501035_0172593 3300049822 Bacteria 1867
148 Ga0501044_0036836 3300049823 Bacteria 5116
149 Ga0501044_0061435 3300049823 Bacteria 3843
150 Ga0501044_0068151 3300049823 Bacteria 3625
151 Ga0501044_0844857 3300049823 Bacteria 793
152 Ga0265314_10076129
153 rootL2_10143375
154 rootH1_10048114
155 Ga0070683_100026176
156 Ga0070670_100400669
157 Ga0070713_100064820
158 Ga0070679_100018700
159 Ga0070684_100230488
160 Ga0068856_100251771
161 Ga0105240_10540520
162 Ga0157369_10287486
163 Ga0163163_10117239
164 Ga0207652_10012871
165 Ga0207700_10067626
166 Ga0207661_10004682
167 Ga0207702_10148713
168 Ga0265337_1002510
169 Ga0265337_1007504
170 Ga0265337_1057867
171 Ga0265319_1003044
172 Ga0265319_1004807
173 Ga0265319_1031364
174 Ga0265319_1043512
175 Ga0265334_10002963
176 Ga0265334_10100517
177 Ga0265318_10000055
178 Ga0265318_10002927
179 Ga0265318_10003002
180 Ga0265318_10006157
181 Ga0265318_10007620
182 Ga0265318_10052150
183 Ga0265323_10001009
184 Ga0265323_10003532
185 Ga0265323_10025522
186 Ga0265323_10038377
187 Ga0265322_10002976
188 Ga0265322_10011330
189 Ga0265322_10019073
190 Ga0265322_10021142
191 Ga0265322_10064780
192 Ga0265336_10001468
193 Ga0307515_10118613
194 Ga0265338_10000796
195 Ga0265338_10012469
196 Ga0265324_10002074
197 Ga0265324_10020964
198 Ga0265324_10021715
199 Ga0265324_10069321
200 Ga0265330_10006302
201 Ga0265330_10032801
202 Ga0265330_10089610
203 Ga0265332_10173762
204 Ga0265328_10016496
205 Ga0265328_10021287
206 Ga0265320_10000623
207 Ga0265320_10001063
208 Ga0265320_10002930
209 Ga0265320_10006033
210 Ga0265320_10011554
211 Ga0265320_10028149
212 Ga0265320_10037889
213 Ga0265320_10060801
214 Ga0265325_10012512
215 Ga0265325_10037310
216 Ga0265325_10065574
217 Ga0265325_10125202
218 Ga0265329_10012890
219 Ga0265340_10007769
220 Ga0265340_10040619
221 Ga0265340_10048953
222 Ga0265339_10073698
223 Ga0265339_10122092
224 Ga0265331_10003164
225 Ga0265331_10005587
226 Ga0265331_10005595
227 Ga0265327_10003004
228 Ga0265327_10003241
229 Ga0265327_10037048
230 Ga0265316_10001718
231 Ga0265316_10051519
232 Ga0265316_10097632
233 Ga0265316_10120334
234 Ga0265316_10165963
235 Ga0265316_10177623
236 Ga0265316_10210655
237 Ga0265316_10424038
238 Ga0265316_10549491
239 Ga0265313_10002474
240 Ga0265313_10014516
241 Ga0265313_10062660
242 Ga0265313_10081717
243 Ga0265314_10000587
244 Ga0265314_10002055
245 Ga0265314_10004386
246 Ga0265314_10348202
247 Ga0265342_10019700
248 Ga0265342_10036637
249 Ga0265342_10042777
250 Ga0265342_10053852
251 Ga0265342_10058772
252 Ga0265342_10060221
253 Ga0307413_10715538
254 Ga0307414_10469219
255 Ga0373935_0503662
256 Ga0395905_0266147
257 Ga0395905_0484957
258 Ga0451577_0041607
259 Ga0451577_0284221
260 Ga0451577_0349486
261 Ga0453683_0002775
262 Ga0453684_0000019
263 Ga0453684_0049161
264 Ga0453684_0101322
265 Ga0466968_0203305
266 Ga0451576_0005654
267 Ga0451576_0110432
268 Ga0451576_0147624
269 Ga0451576_0316717
270 Ga0495636_0128232
271 Ga0501031_0033895
272 Ga0501032_0001748
273 Ga0501032_0031062
274 Ga0501033_0000999
275 Ga0501033_0005982
276 Ga0501034_0159035
277 Ga0501037_0021568
278 Ga0501038_0000543
279 Ga0501038_0569542
280 Ga0501038_0743344
281 Ga0501039_0002324
282 Ga0501042_0340137
283 Ga0501043_0005640
284 Ga0501046_0003023
285 Ga0501046_0004047
286 Ga0501047_0013126
287 Ga0501047_0027381
288 Ga0501047_0080385
289 Ga0501047_0243904
290 Ga0501047_0379125
291 Ga0501048_0003401
292 Ga0501070_0061883
293 Ga0501080_0757229
294 Ga0501083_0002577
295 Ga0501083_0060048
296 Ga0501035_0000854
297 Ga0501035_0007905
298 Ga0501035_0172593
299 Ga0501044_0036836
300 Ga0501044_0061435
301 Ga0501044_0068151
302 Ga0501044_0844857

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fzz-assembly1.cif.gz_B exonuclease x in complex with 5' overhanging duplex dna 0.8403 8 206
4fzz-assembly1.cif.gz_B exonuclease x in complex with 5' overhanging duplex dna 0.8311 8 206
1j53-assembly1.cif.gz_A structure of the n-terminal exonuclease domain of the epsilon subunit of e.coli dna polymerase iii at ph 8.5 0.777 8 185
2ido-assembly1.cif.gz_A structure of the e. coli pol iii epsilon-hot proofreading complex 0.7633 7 186
1j53-assembly1.cif.gz_A structure of the n-terminal exonuclease domain of the epsilon subunit of e.coli dna polymerase iii at ph 8.5 0.7522 8 185
ID Description Score Start End Superfamily
af_Q2FYH5_2_169_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8208 5 186 3.30.420.10
af_Q2G1Z8_409_554_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.813 1 147 3.30.420.10
af_B0G161_292_467_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8127 4 186 3.30.420.10
af_Q2FWZ6_2_173_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8058 5 189 3.30.420.10
af_P78271_1_70_2.20.140.10 Mainly Beta;Single Sheet;q64v53_bacfr protein fold;WGR domain 0.8035 11 44 2.20.140.10
ID Description Score Start End GO Terms
AF-A0A355SYB4-F1-model_v4 3'-5' exonuclease 0.966 6 210 GO:0003676
GO:0004527
AF-A0A2Z4AEK4-F1-model_v4 Exonuclease domain-containing protein 0.9627 5 207 GO:0003676
AF-A0A2G4HF33-F1-model_v4 DNA polymerase III subunit epsilon 0.9597 1 221 GO:0003676
AF-A0A2D7F5L3-F1-model_v4 DNA polymerase III subunit epsilon 0.9596 5 221 GO:0003676
GO:0008408
AF-A0A368B1J9-F1-model_v4 3'-5' exonuclease 0.9579 2 221 GO:0003676
GO:0004527

Map