F211856

General Info

Members Datasets Scaffolds Average Seq Length
151 132 302 607

Family's Representative Sequence

Representative Sequence 3300027907|Ga0207428_10040989|Ga0207428_100409893
Length 693
Sequence MTSTGAGLVSFAEGSAPGGPGAEQSAEALLGVPGRCVVRGRFRGIPGCCWDAGGPLLPRTFMLGFRLKSVSFLRTLRDLNQLWLSEAMAAPIEDYALLSDLQTGPLVSRNGSVDWLCFPRFDSPSLFSALVGTEEHGRWLLAPSYPGAAVVDRHYVDSTFVLQTTWETVSGRVLVTDFMPVGFGRSSLLRRITGLDGTVEMHQQLIIRPGYATVLPWVSRVRDRADPEAAILMAMAGPDAIALRGPHLPQAYAHGHEGNFAVSKGETVDFELTWFPSHREVPTALDVDHALDQAVSYWARWSSHCRQDGAYGDAVKRSLLVLRALTHYETGGIVAAPTTSLPEDFGGPRNWDYRYCWLRDAALTLESMLTHGYETEALQWRNWLLRALAGDPEDLQIMYGVGGERDLPERELDHLPGYRNSKPVRIGNAAVAQFQADVVGEVMVALERLRLAGGKEDHFSWALQRLLLGFVEKHIEDRDFGLWEMRGNAQYFTHSRVMMWAAFDSGIRAVRDHGMSGAADHWEHLRERLRAEILREGFDPELNSFTQTYGGGQTDAALLVMPQVGFLAYDDEHMLGTVARMEKELLTDGGLLLRYRTESGVDGLDPGEHPFLACSFWLVEQYARTGRQADATILMDKLVGFSNELGLLSEEYAVKEQRMAGNFPQAFSHLALVRAADAMHRVDRLSLAVHTGA

Samples

Sample ID Description Type Environment
1 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
16 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
17 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
18 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
29 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
30 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
31 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
46 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
47 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
50 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
54 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
59 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
60 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
61 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
62 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
63 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
64 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
65 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
66 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
67 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
68 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
69 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
70 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
71 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
72 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
73 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
74 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
75 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
76 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
77 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
78 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
79 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
80 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
81 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
82 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
83 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
84 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
85 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
86 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
87 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
88 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
89 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
94 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
95 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
96 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
99 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
100 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
104 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
105 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
106 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
107 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
108 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
109 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
110 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
111 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
112 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
113 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
114 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
115 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
116 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
117 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
118 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
119 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
120 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
121 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
122 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
123 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
124 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
125 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
126 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
127 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
128 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
129 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
130 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified
131 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
132 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.43
Metatranscriptomes 0
Isolates 14.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.28
Nodule 4.64
Rhizoplane 8.61
Rhizosphere 70.86
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207428_10040989 3300027907 Bacteria 3751
2 Ga0065714_10070818 3300005288 Bacteria 3756
3 Ga0070668_100039508 3300005347 Bacteria 3608
4 Ga0070709_10074449 3300005434 Bacteria 2200
5 Ga0070714_100005173 3300005435 Bacteria 9928
6 Ga0070714_100014085 3300005435 Bacteria 6418
7 Ga0070713_100049472 3300005436 Bacteria 3468
8 Ga0070713_100077437 3300005436 Bacteria 2827
9 Ga0070710_10001212 3300005437 Bacteria 12203
10 Ga0070710_10005361 3300005437 Bacteria 6083
11 Ga0070711_100005280 3300005439 Bacteria 7710
12 Ga0070665_100010187 3300005548 Bacteria 9509
13 Ga0068856_100000283 3300005614 Bacteria 55412
14 Ga0081455_10002888 3300005937 Bacteria 20196
15 Ga0075365_10086931 3300006038 Bacteria 2125
16 Ga0075363_100004191 3300006048 Bacteria 6262
17 Ga0075364_10042806 3300006051 Bacteria 2943
18 Ga0075432_10003520 3300006058 Bacteria 5308
19 Ga0070715_10015559 3300006163 Bacteria 2841
20 Ga0070716_100012733 3300006173 Bacteria 4270
21 Ga0070712_100008402 3300006175 Bacteria 6493
22 Ga0075367_10009132 3300006178 Bacteria 5169
23 Ga0075366_10037785 3300006195 Bacteria 2851
24 Ga0075430_100050845 3300006846 Bacteria 3493
25 Ga0075431_100054102 3300006847 Bacteria 4139
26 Ga0105244_10009598 3300009036 Bacteria 5933
27 Ga0105244_10020692 3300009036 Bacteria 3651
28 Ga0111539_10201963 3300009094 Bacteria 2318
29 Ga0114129_10073314 3300009147 Bacteria 4769
30 Ga0105243_10149890 3300009148 Bacteria 2000
31 Ga0157370_10013315 3300013104 Bacteria 8472
32 Ga0163162_10077269 3300013306 Bacteria 3392
33 Ga0163161_10106166 3300017792 Bacteria 2095
34 Ga0213875_10018848 3300021388 Bacteria 3322
35 Ga0207655_1006244 3300025728 Bacteria 7927
36 Ga0207692_10000919 3300025898 Bacteria 10647
37 Ga0207699_10000245 3300025906 Bacteria 30434
38 Ga0207693_10003833 3300025915 Bacteria 12803
39 Ga0207693_10037212 3300025915 Bacteria 3835
40 Ga0207663_10003587 3300025916 Bacteria 7612
41 Ga0207664_10005476 3300025929 Bacteria 8685
42 Ga0207690_10030325 3300025932 Bacteria 3448
43 Ga0207665_10039483 3300025939 Bacteria 3147
44 Ga0207711_10025441 3300025941 Bacteria 4967
45 Ga0207668_10026850 3300025972 Bacteria 3745
46 Ga0207703_10098327 3300026035 Bacteria 2475
47 Ga0207702_10000052 3300026078 Bacteria 137784
48 Ga0207648_10153846 3300026089 Bacteria 2030
49 Ga0207675_100064635 3300026118 Bacteria 3420
50 Ga0209589_1000007 3300027357 Bacteria 425699
51 Ga0209489_100008 3300027361 Bacteria 425699
52 Ga0209700_100009 3300027363 Bacteria 425699
53 Ga0207428_10031159 3300027907 Bacteria 4405
54 Ga0268266_10001410 3300028379 Bacteria 28680
55 Ga0268266_10017815 3300028379 Bacteria 6053
56 Ga0307517_10000248 3300028786 Bacteria 92084
57 Ga0307408_100012328 3300031548 Bacteria 5661
58 Ga0307409_100062624 3300031995 Bacteria 2913
59 Ga0307416_100025078 3300032002 Bacteria 4365
60 Ga0373957_0004710 3300035120 Bacteria 4174
61 Ga0373924_0001773 3300035410 Bacteria 7129
62 Ga0373937_0057468 3300036401 Bacteria 3574
63 Ga0395900_0018877 3300037418 Bacteria 7033
64 Ga0395900_0019127 3300037418 Bacteria 6984
65 Ga0395900_0035722 3300037418 Bacteria 5120
66 Ga0395900_0090377 3300037418 Bacteria 3147
67 Ga0395898_0005946 3300037466 Bacteria 13104
68 Ga0395898_0044183 3300037466 Bacteria 4388
69 Ga0395898_0126022 3300037466 Bacteria 2453
70 Ga0436364_1528058 3300037853 Bacteria 40650
71 Ga0395901_0013655 3300038443 Bacteria 8257
72 Ga0395901_0015721 3300038443 Bacteria 7710
73 Ga0395901_0030948 3300038443 Bacteria 5516
74 Ga0395901_0090567 3300038443 Bacteria 3201
75 Ga0439432_021263 3300042006 Bacteria 2153
76 Ga0450907_000049 3300042146 Bacteria 50032
77 Ga0439434_0002381 3300042435 Bacteria 5462
78 Ga0450918_004484 3300042531 Bacteria 2541
79 Ga0495653_0102696 3300046463 Bacteria 2068
80 Ga0495628_0057531 3300046516 Bacteria 3058
81 Ga0495665_0014952 3300046531 Bacteria 4180
82 Ga0495640_0005841 3300046533 Bacteria 9774
83 Ga0495645_0039772 3300046543 Bacteria 3429
84 Ga0495635_0021194 3300046663 Bacteria 4530
85 Ga0495588_0021566 3300046674 Bacteria 3175
86 Ga0495599_0000766 3300046678 Bacteria 18081
87 Ga0495672_0041005 3300047320 Bacteria 2803
88 Ga0495680_0081779 3300047322 Bacteria 2437
89 Ga0495675_0089468 3300047444 Bacteria 1933
90 Ga0495684_0068777 3300047471 Bacteria 2692
91 Ga0495593_0001879 3300047673 Bacteria 12513
92 Ga0496102_0010495 3300048905 Bacteria 7975
93 Ga0496102_0025683 3300048905 Bacteria 5247
94 Ga0496102_0077230 3300048905 Bacteria 3065
95 Ga0496103_0004392 3300048906 Bacteria 8554
96 Ga0496106_0001100 3300048909 Bacteria 19988
97 Ga0496106_0010638 3300048909 Bacteria 6800
98 Ga0496107_0001808 3300048910 Bacteria 13487
99 Ga0496108_0000424 3300048911 Bacteria 34409
100 Ga0496109_0000199 3300048912 Bacteria 59773
101 Ga0496109_0002096 3300048912 Bacteria 16580
102 Ga0496110_0111577 3300048913 Bacteria 2458
103 Ga0496112_0010020 3300048915 Bacteria 8578
104 Ga0496113_0032659 3300048916 Bacteria 3783
105 Ga0496117_0000620 3300048920 Bacteria 57459
106 Ga0496122_0004115 3300048925 Bacteria 18403
107 Ga0496123_0039240 3300048926 Bacteria 3315
108 Ga0496126_0025642 3300048929 Bacteria 5667
109 Ga0501034_0016288 3300049571 Bacteria 7632
110 Ga0501038_0025906 3300049574 Bacteria 5224
111 Ga0501043_0015628 3300049579 Bacteria 5951
112 Ga0501067_0010170 3300049583 Bacteria 5204
113 Ga0501069_0020896 3300049585 Bacteria 3550
114 Ga0501073_0038047 3300049589 Bacteria 3414
115 Ga0501074_0035121 3300049590 Bacteria 3632
116 Ga0501044_0060346 3300049823 Bacteria 3883
117 nmdc:mga00v17_41226_c1 3300050491 Bacteria 2772
118 nmdc:mga06z11_22281_c1 3300050494 Bacteria 2957
119 nmdc:mga07m45_1003_c1 3300050496 Bacteria 12468
120 nmdc:mga05p37_4164_c2 3300050507 Bacteria 4800
121 nmdc:mga09592_73701_c1 3300050508 Bacteria 2901
122 nmdc:mga0qj67_49673_c1 3300050509 Bacteria 3315
123 nmdc:mga08y16_30288_c1 3300050511 Bacteria 5697
124 Ga0495601_0014928 3300053077 Bacteria 4689
125 Ga0495595_0012876 3300053084 Bacteria 3527
126 Ga0495619_0011527 3300053085 Bacteria 5572
127 Ga0500556_0002511 3300053104 Bacteria 5843
128 Ga0500559_0001233 3300053136 Bacteria 15080
129 Ga0500616_0001099 3300053153 Bacteria 28063
130 2844856086 2844852863 Bacteria 3849151
131 2848554607 2848551377 Bacteria 3720646
132 2852645464 2852643534 Bacteria 3013378
133 2857633548 2857632687 Bacteria 2448521
134 2870801850 2870801768 Bacteria 2710986
135 2883577497 2883577096 Bacteria 4709178
136 2919395715 2919391150 Bacteria 4884741
137 2929202308 2929199973 Bacteria 7260745
138 2929618938 2929615660 Bacteria 9193770
139 2929631015 2929624759 Bacteria 9339455
140 2933580352 2933577622 Bacteria 9116884
141 2939600329 2939598168 Bacteria 4687164
142 2939662539 2939660829 Bacteria 3784848
143 2945945011 2945941187 Bacteria 4682474
144 2946006625 2946003308 Bacteria 3857229
145 2954000251 2953998280 Bacteria 4812144
146 8004022698 8004021418 Bacteria 4313954
147 8004025867 8004025490 Bacteria 4327753
148 8055742787 8055742211 Bacteria 9226248
149 8055913805 8055909800 Bacteria 7278581
150 8056039966 8056037122 Bacteria 3854319
151 8057348120 8057345674 Bacteria 4160394
152 Ga0207428_10040989
153 Ga0065714_10070818
154 Ga0070668_100039508
155 Ga0070709_10074449
156 Ga0070714_100005173
157 Ga0070714_100014085
158 Ga0070713_100049472
159 Ga0070713_100077437
160 Ga0070710_10001212
161 Ga0070710_10005361
162 Ga0070711_100005280
163 Ga0070665_100010187
164 Ga0068856_100000283
165 Ga0081455_10002888
166 Ga0075365_10086931
167 Ga0075363_100004191
168 Ga0075364_10042806
169 Ga0075432_10003520
170 Ga0070715_10015559
171 Ga0070716_100012733
172 Ga0070712_100008402
173 Ga0075367_10009132
174 Ga0075366_10037785
175 Ga0075430_100050845
176 Ga0075431_100054102
177 Ga0105244_10009598
178 Ga0105244_10020692
179 Ga0111539_10201963
180 Ga0114129_10073314
181 Ga0105243_10149890
182 Ga0157370_10013315
183 Ga0163162_10077269
184 Ga0163161_10106166
185 Ga0213875_10018848
186 Ga0207655_1006244
187 Ga0207692_10000919
188 Ga0207699_10000245
189 Ga0207693_10003833
190 Ga0207693_10037212
191 Ga0207663_10003587
192 Ga0207664_10005476
193 Ga0207690_10030325
194 Ga0207665_10039483
195 Ga0207711_10025441
196 Ga0207668_10026850
197 Ga0207703_10098327
198 Ga0207702_10000052
199 Ga0207648_10153846
200 Ga0207675_100064635
201 Ga0209589_1000007
202 Ga0209489_100008
203 Ga0209700_100009
204 Ga0207428_10031159
205 Ga0268266_10001410
206 Ga0268266_10017815
207 Ga0307517_10000248
208 Ga0307408_100012328
209 Ga0307409_100062624
210 Ga0307416_100025078
211 Ga0373957_0004710
212 Ga0373924_0001773
213 Ga0373937_0057468
214 Ga0395900_0018877
215 Ga0395900_0019127
216 Ga0395900_0035722
217 Ga0395900_0090377
218 Ga0395898_0005946
219 Ga0395898_0044183
220 Ga0395898_0126022
221 Ga0436364_1528058
222 Ga0395901_0013655
223 Ga0395901_0015721
224 Ga0395901_0030948
225 Ga0395901_0090567
226 Ga0439432_021263
227 Ga0450907_000049
228 Ga0439434_0002381
229 Ga0450918_004484
230 Ga0495653_0102696
231 Ga0495628_0057531
232 Ga0495665_0014952
233 Ga0495640_0005841
234 Ga0495645_0039772
235 Ga0495635_0021194
236 Ga0495588_0021566
237 Ga0495599_0000766
238 Ga0495672_0041005
239 Ga0495680_0081779
240 Ga0495675_0089468
241 Ga0495684_0068777
242 Ga0495593_0001879
243 Ga0496102_0010495
244 Ga0496102_0025683
245 Ga0496102_0077230
246 Ga0496103_0004392
247 Ga0496106_0001100
248 Ga0496106_0010638
249 Ga0496107_0001808
250 Ga0496108_0000424
251 Ga0496109_0000199
252 Ga0496109_0002096
253 Ga0496110_0111577
254 Ga0496112_0010020
255 Ga0496113_0032659
256 Ga0496117_0000620
257 Ga0496122_0004115
258 Ga0496123_0039240
259 Ga0496126_0025642
260 Ga0501034_0016288
261 Ga0501038_0025906
262 Ga0501043_0015628
263 Ga0501067_0010170
264 Ga0501069_0020896
265 Ga0501073_0038047
266 Ga0501074_0035121
267 Ga0501044_0060346
268 nmdc:mga00v17_41226_c1
269 nmdc:mga06z11_22281_c1
270 nmdc:mga07m45_1003_c1
271 nmdc:mga05p37_4164_c2
272 nmdc:mga09592_73701_c1
273 nmdc:mga0qj67_49673_c1
274 nmdc:mga08y16_30288_c1
275 Ga0495601_0014928
276 Ga0495595_0012876
277 Ga0495619_0011527
278 Ga0500556_0002511
279 Ga0500559_0001233
280 Ga0500616_0001099
281 2844856086
282 2848554607
283 2852645464
284 2857633548
285 2870801850
286 2883577497
287 2919395715
288 2929202308
289 2929618938
290 2929631015
291 2933580352
292 2939600329
293 2939662539
294 2945945011
295 2946006625
296 2954000251
297 8004022698
298 8004025867
299 8055742787
300 8055913805
301 8056039966
302 8057348120

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00723

Glyco_hydro_15

Glycosyl hydrolases family 15

309

677

0.96

PF19291

TREH_N

Trehalase-like, N-terminal

78

248

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hop-assembly1.cif.gz_B 1.65 angstrom resolution crystal structure of lmo0182 (residues 1-245) from listeria monocytogenes egd-e 0.8305 271 594
5hop-assembly1.cif.gz_B 1.65 angstrom resolution crystal structure of lmo0182 (residues 1-245) from listeria monocytogenes egd-e 0.8114 271 594
5z3c-assembly1.cif.gz_A glycosidase e178a 0.8102 227 592
5z3a-assembly1.cif.gz_A glycosidase wild type 0.809 227 592
5z3b-assembly1.cif.gz_A glycosidase y48f 0.8089 227 592
ID Description Score Start End Superfamily
af_Q10211_257_646_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9673 227 594 1.50.10.10
af_P71741_292_669_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9546 227 592 1.50.10.10
af_Q552D2_275_646_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9226 227 592 1.50.10.10
af_P71741_292_669_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9226 227 592 1.50.10.10
af_Q10211_257_646_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9115 227 594 1.50.10.10
ID Description Score Start End GO Terms
AF-N1UV99-F1-model_v4 Glucoamylase 0.9913 60 597 GO:0004553
GO:0005975
AF-A0A5Q2VZP0-F1-model_v4 Glycoside hydrolase family 15 protein 0.9912 1 594 GO:0004553
GO:0005975
AF-A0A1H4MBB0-F1-model_v4 Glucoamylase (Glucan-1,4-alpha-glucosidase), GH15 family 0.9911 1 594 GO:0004553
GO:0005975
AF-A0A1Y3LW60-F1-model_v4 deleted 0.9903 1 594
AF-A0A7G2SJK3-F1-model_v4 deleted 0.9885 1 594

Map