F209779

General Info

Members Datasets Scaffolds Average Seq Length
150 122 300 323

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0045204|Ga0496104_0045204_1702_2853
Length 372
Sequence MEKPGSADGELDIRRVSACQKVNLEYPRTPDYAKANYEKHSLPKPRLHWRNRMTTLEKRRLTLSVERFALKNPFVISRGAKTEAVVVVATITQGSVAGRGECTPYARYGESVESVAAGADRFALQQLLPAGAARNALDCALWDIEAKLCGLPAFQLAGLSRIAPCVTAFTLSVGTPDEMAQAARAAAERPVLKVKLAGEGDAARLAAVRAAAPESELIVDANEAWRPENLDENFFACAAAGVSLIEQPLPAGADDALAERRWPVAVCADESVHDRQGLAALRNRYDLINIKLDKTGGLTEALALADEAERLGFGLFVGCMVASSLAMAPALLLAGRARFVDLDGPLLLAQDRPHGLRFHGSTVFPPESALWG

Samples

Sample ID Description Type Environment
1 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
40 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
41 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
42 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
61 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
62 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
63 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
64 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
65 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
66 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
67 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
68 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
71 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
72 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
79 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
80 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
81 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
82 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
85 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
86 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
87 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
88 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
89 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
90 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
91 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
92 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
93 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
94 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
95 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
98 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
101 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
102 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
103 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
104 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
106 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
107 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
108 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
109 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
110 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
111 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
112 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
113 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
114 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
115 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
116 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
117 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
118 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
119 2855195626 Pectobacterium atrosepticum SS26 Isolate Stem Tuber
120 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
121 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
122 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.33
Metatranscriptomes 0
Isolates 6.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6
Nodule 0
Rhizoplane 12
Rhizosphere 70.67
Stem 0
Stem Tuber 2
Unclassified 1.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496104_0045204 3300048907 Bacteria 4141
2 JGI25151J46595_10000210 3300003187 Bacteria 71508
3 rootH1_10131030 3300003316 Bacteria 1455
4 rootL2_10117610 3300003322 Bacteria 1465
5 Ga0070658_10011084 3300005327 Bacteria 7228
6 Ga0070658_10078229 3300005327 Bacteria 2714
7 Ga0070658_10090156 3300005327 Bacteria 2526
8 Ga0070680_100253549 3300005336 Bacteria 1488
9 Ga0070682_100016316 3300005337 Bacteria 4316
10 Ga0070660_100026065 3300005339 Bacteria 4351
11 Ga0070660_100036258 3300005339 Bacteria 3735
12 Ga0070689_100101908 3300005340 Bacteria 2273
13 Ga0070661_100204729 3300005344 Bacteria 1509
14 Ga0070675_100079520 3300005354 Bacteria 2732
15 Ga0070671_100029779 3300005355 Bacteria 4503
16 Ga0070659_100000272 3300005366 Bacteria 40405
17 Ga0070679_100153459 3300005530 Bacteria 2279
18 Ga0068853_100024694 3300005539 Bacteria 5041
19 Ga0068853_100037351 3300005539 Bacteria 4132
20 Ga0070665_100000015 3300005548 Bacteria 462744
21 Ga0070665_100016001 3300005548 Bacteria 7530
22 Ga0070665_100073037 3300005548 Bacteria 3437
23 Ga0068855_100069315 3300005563 Bacteria 4104
24 Ga0068864_100274830 3300005618 Bacteria 1571
25 Ga0068861_100207557 3300005719 Bacteria 1648
26 Ga0068863_100027037 3300005841 Bacteria 5472
27 Ga0068858_100178403 3300005842 Bacteria 2005
28 Ga0068860_100019476 3300005843 Bacteria 6579
29 Ga0081455_10172616 3300005937 Bacteria 1645
30 Ga0070716_100078424 3300006173 Unclassified 1964
31 Ga0105240_10054950 3300009093 Bacteria 4988
32 Ga0105240_10286490 3300009093 Bacteria 1890
33 Ga0105245_10130731 3300009098 Bacteria 2355
34 Ga0105241_10152735 3300009174 Bacteria 1890
35 Ga0105248_10010439 3300009177 Bacteria 10230
36 Ga0105237_10398143 3300009545 Bacteria 1382
37 Ga0105238_10080778 3300009551 Bacteria 3240
38 Ga0105249_10131412 3300009553 Bacteria 2391
39 Ga0105239_10299558 3300010375 Bacteria 1811
40 Ga0157373_10012253 3300013100 Bacteria 6304
41 Ga0163163_10011331 3300014325 Bacteria 8083
42 Ga0163163_10031106 3300014325 Bacteria 5149
43 Ga0182008_10042218 3300014497 Bacteria 2272
44 Ga0157379_10051758 3300014968 Bacteria 3667
45 Ga0182007_10011496 3300015262 Bacteria 3444
46 Ga0213875_10000751 3300021388 Bacteria 24499
47 Ga0209130_1003024 3300025284 Bacteria 7597
48 Ga0209025_1000138 3300025294 Bacteria 189551
49 Ga0207426_1000475 3300025302 Bacteria 61522
50 Ga0207682_10082179 3300025893 Bacteria 1383
51 Ga0207680_10064088 3300025903 Bacteria 2252
52 Ga0207705_10094112 3300025909 Bacteria 2197
53 Ga0207695_10065486 3300025913 Bacteria 3736
54 Ga0207671_10275977 3300025914 Bacteria 1325
55 Ga0207657_10017480 3300025919 Bacteria 6873
56 Ga0207657_10020406 3300025919 Bacteria 6262
57 Ga0207657_10093539 3300025919 Bacteria 2504
58 Ga0207652_10119182 3300025921 Bacteria 2347
59 Ga0207690_10000111 3300025932 Bacteria 66639
60 Ga0207670_10089153 3300025936 Bacteria 2177
61 Ga0207669_10282434 3300025937 Bacteria 1253
62 Ga0207691_10045315 3300025940 Bacteria 4043
63 Ga0207711_10001928 3300025941 Bacteria 18837
64 Ga0207661_10229522 3300025944 Bacteria 1643
65 Ga0207667_10139376 3300025949 Bacteria 2497
66 Ga0207639_10275173 3300026041 Bacteria 1478
67 Ga0207676_10158248 3300026095 Bacteria 1960
68 Ga0207675_100334457 3300026118 Bacteria 1481
69 Ga0268266_10012009 3300028379 Bacteria 7495
70 Ga0268266_10026000 3300028379 Bacteria 4979
71 Ga0307517_10153092 3300028786 Bacteria 1575
72 Ga0265338_10024379 3300028800 Bacteria 6181
73 Ga0265327_10002287 3300031251 Bacteria 20546
74 Ga0265314_10012184 3300031711 Bacteria 7042
75 Ga0316576_10009892 3300031727 Bacteria 6173
76 Ga0316578_10065694 3300031728 Bacteria 2142
77 Ga0373936_0004121 3300035113 Bacteria 5478
78 Ga0316574_0073669 3300035398 Bacteria 2160
79 Ga0373933_0022767 3300035724 Bacteria 3572
80 Ga0373937_0023058 3300036401 Bacteria 5601
81 Ga0316582_0204008 3300036647 Bacteria 1349
82 Ga0316584_0013488 3300036712 Bacteria 5786
83 Ga0395899_0000178 3300037312 Bacteria 93671
84 Ga0395900_0000006 3300037418 Bacteria 495364
85 Ga0395900_0157018 3300037418 Bacteria 2323
86 Ga0395898_0002108 3300037466 Bacteria 24660
87 Ga0395905_0006333 3300037471 Bacteria 11926
88 Ga0395905_0068068 3300037471 Bacteria 3335
89 Ga0395905_0185238 3300037471 Bacteria 1954
90 Ga0436364_0858825 3300037853 Bacteria 170378
91 Ga0395901_0000001 3300038443 Bacteria 800383
92 Ga0395901_0149926 3300038443 Bacteria 2451
93 Ga0400483_037166 3300039062 Bacteria 1930
94 Ga0400483_220872 3300039062 Bacteria 1548
95 Ga0400483_257093 3300039062 Bacteria 5561
96 Ga0439432_030685 3300042006 Bacteria 1742
97 Ga0466961_0000530 3300044693 Bacteria 24196
98 Ga0466971_0000414 3300044719 Bacteria 16681
99 Ga0466970_0002709 3300044765 Bacteria 8558
100 Ga0466957_0012821 3300044842 Bacteria 4857
101 Ga0466959_0000108 3300045049 Bacteria 53075
102 Ga0466958_0011124 3300045836 Bacteria 5061
103 Ga0495583_0063799 3300046506 Bacteria 1636
104 Ga0495610_0006793 3300046512 Bacteria 7763
105 Ga0495643_0140291 3300046522 Bacteria 1206
106 Ga0495668_0067465 3300046616 Bacteria 1968
107 Ga0495611_0003115 3300046648 Bacteria 7363
108 Ga0495625_0031781 3300046660 Bacteria 3923
109 Ga0495625_0051813 3300046660 Bacteria 2941
110 Ga0495613_0004857 3300046689 Bacteria 10091
111 Ga0495670_0091838 3300046691 Bacteria 1554
112 Ga0495671_0004363 3300046692 Bacteria 8482
113 Ga0496102_0087980 3300048905 Bacteria 2871
114 Ga0496104_0000195 3300048907 Bacteria 54198
115 Ga0496104_0015550 3300048907 Bacteria 6893
116 Ga0496104_0097390 3300048907 Bacteria 2815
117 Ga0496105_0000068 3300048908 Bacteria 82800
118 Ga0496107_0057463 3300048910 Bacteria 2812
119 Ga0496109_0308322 3300048912 Bacteria 1493
120 Ga0496112_0055600 3300048915 Bacteria 3892
121 Ga0496112_0155185 3300048915 Bacteria 2256
122 Ga0496113_0020585 3300048916 Bacteria 4640
123 Ga0496113_0099090 3300048916 Bacteria 2257
124 Ga0496115_0010450 3300048918 Bacteria 6937
125 Ga0496115_0013256 3300048918 Bacteria 6230
126 Ga0496115_0024830 3300048918 Bacteria 4661
127 Ga0496115_0085504 3300048918 Bacteria 2573
128 Ga0496115_0188447 3300048918 Bacteria 1704
129 Ga0496119_0004407 3300048922 Bacteria 14034
130 Ga0496125_0275888 3300048928 Bacteria 1045
131 Ga0501035_0009738 3300049822 Bacteria 8937
132 Ga0501044_0205229 3300049823 Bacteria 1928
133 nmdc:mga08x19_314826_c1 3300050514 Unclassified 1088
134 Ga0495619_0217712 3300053085 Bacteria 1323
135 Ga0500643_001250 3300053087 Bacteria 15061
136 Ga0500643_001549 3300053087 Bacteria 13025
137 Ga0500568_0020889 3300053139 Bacteria 2826
138 Ga0500636_0101394 3300053177 Bacteria 1636
139 Ga0500645_000322 3300053730 Bacteria 33950
140 Ga0466962_0000176 3300061719 Bacteria 26558
141 2538425497 2537561728 Bacteria 5149301
142 2739791982 2739367756 Bacteria 4553612
143 2821450174 2821443989 Bacteria 7658172
144 2840882715 2840878972 Bacteria 5483153
145 2844537386 2844533157 Bacteria 7517899
146 2854685373 2854681122 Bacteria 4548679
147 2855198425 2855195626 Bacteria 4927512
148 2858469265 2858466076 Bacteria 4722413
149 2871276045 2871272651 Bacteria 5042015
150 3000406772 3000405567 Bacteria 3779330
151 Ga0496104_0045204
152 JGI25151J46595_10000210
153 rootH1_10131030
154 rootL2_10117610
155 Ga0070658_10011084
156 Ga0070658_10078229
157 Ga0070658_10090156
158 Ga0070680_100253549
159 Ga0070682_100016316
160 Ga0070660_100026065
161 Ga0070660_100036258
162 Ga0070689_100101908
163 Ga0070661_100204729
164 Ga0070675_100079520
165 Ga0070671_100029779
166 Ga0070659_100000272
167 Ga0070679_100153459
168 Ga0068853_100024694
169 Ga0068853_100037351
170 Ga0070665_100000015
171 Ga0070665_100016001
172 Ga0070665_100073037
173 Ga0068855_100069315
174 Ga0068864_100274830
175 Ga0068861_100207557
176 Ga0068863_100027037
177 Ga0068858_100178403
178 Ga0068860_100019476
179 Ga0081455_10172616
180 Ga0070716_100078424
181 Ga0105240_10054950
182 Ga0105240_10286490
183 Ga0105245_10130731
184 Ga0105241_10152735
185 Ga0105248_10010439
186 Ga0105237_10398143
187 Ga0105238_10080778
188 Ga0105249_10131412
189 Ga0105239_10299558
190 Ga0157373_10012253
191 Ga0163163_10011331
192 Ga0163163_10031106
193 Ga0182008_10042218
194 Ga0157379_10051758
195 Ga0182007_10011496
196 Ga0213875_10000751
197 Ga0209130_1003024
198 Ga0209025_1000138
199 Ga0207426_1000475
200 Ga0207682_10082179
201 Ga0207680_10064088
202 Ga0207705_10094112
203 Ga0207695_10065486
204 Ga0207671_10275977
205 Ga0207657_10017480
206 Ga0207657_10020406
207 Ga0207657_10093539
208 Ga0207652_10119182
209 Ga0207690_10000111
210 Ga0207670_10089153
211 Ga0207669_10282434
212 Ga0207691_10045315
213 Ga0207711_10001928
214 Ga0207661_10229522
215 Ga0207667_10139376
216 Ga0207639_10275173
217 Ga0207676_10158248
218 Ga0207675_100334457
219 Ga0268266_10012009
220 Ga0268266_10026000
221 Ga0307517_10153092
222 Ga0265338_10024379
223 Ga0265327_10002287
224 Ga0265314_10012184
225 Ga0316576_10009892
226 Ga0316578_10065694
227 Ga0373936_0004121
228 Ga0316574_0073669
229 Ga0373933_0022767
230 Ga0373937_0023058
231 Ga0316582_0204008
232 Ga0316584_0013488
233 Ga0395899_0000178
234 Ga0395900_0000006
235 Ga0395900_0157018
236 Ga0395898_0002108
237 Ga0395905_0006333
238 Ga0395905_0068068
239 Ga0395905_0185238
240 Ga0436364_0858825
241 Ga0395901_0000001
242 Ga0395901_0149926
243 Ga0400483_037166
244 Ga0400483_220872
245 Ga0400483_257093
246 Ga0439432_030685
247 Ga0466961_0000530
248 Ga0466971_0000414
249 Ga0466970_0002709
250 Ga0466957_0012821
251 Ga0466959_0000108
252 Ga0466958_0011124
253 Ga0495583_0063799
254 Ga0495610_0006793
255 Ga0495643_0140291
256 Ga0495668_0067465
257 Ga0495611_0003115
258 Ga0495625_0031781
259 Ga0495625_0051813
260 Ga0495613_0004857
261 Ga0495670_0091838
262 Ga0495671_0004363
263 Ga0496102_0087980
264 Ga0496104_0000195
265 Ga0496104_0015550
266 Ga0496104_0097390
267 Ga0496105_0000068
268 Ga0496107_0057463
269 Ga0496109_0308322
270 Ga0496112_0055600
271 Ga0496112_0155185
272 Ga0496113_0020585
273 Ga0496113_0099090
274 Ga0496115_0010450
275 Ga0496115_0013256
276 Ga0496115_0024830
277 Ga0496115_0085504
278 Ga0496115_0188447
279 Ga0496119_0004407
280 Ga0496125_0275888
281 Ga0501035_0009738
282 Ga0501044_0205229
283 nmdc:mga08x19_314826_c1
284 Ga0495619_0217712
285 Ga0500643_001250
286 Ga0500643_001549
287 Ga0500568_0020889
288 Ga0500636_0101394
289 Ga0500645_000322
290 Ga0466962_0000176
291 2538425497
292 2739791982
293 2821450174
294 2840882715
295 2844537386
296 2854685373
297 2855198425
298 2858469265
299 2871276045
300 3000406772

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13378

MR_MLE_C

Enolase C-terminal domain-like

177

366

0.88

PF02746

MR_MLE_N

Mandelate racemase / muconate lactonizing enzyme, N-terminal domain

58

158

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gfi-assembly4.cif.gz_D crystal structure of efi-502318, an enolase family member from agrobacterium tumefaciens with homology to dipeptide epimerases (bound sodium, l-ala-l-glu with ordered loop) 0.9827 4 328
4gfi-assembly4.cif.gz_D crystal structure of efi-502318, an enolase family member from agrobacterium tumefaciens with homology to dipeptide epimerases (bound sodium, l-ala-l-glu with ordered loop) 0.9767 4 328
1jpd-assembly1.cif.gz_X l-ala-d/l-glu epimerase 0.936 2 320
2chr-assembly1.cif.gz_A a re-evaluation of the crystal structure of chloromuconate cycloisomerase 0.9348 1 323
2p88-assembly1.cif.gz_D crystal structure of n-succinyl arg/lys racemase from bacillus cereus atcc 14579 0.9344 3 322
ID Description Score Start End Superfamily
4gfiD01 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain 0.9939 4 106 3.30.390.10
4gfiC02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.976 110 328 3.20.20.120
4gfiD01 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain 0.9751 4 106 3.30.390.10
4gfiC02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9544 110 328 3.20.20.120
1jpdX02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9422 117 320 3.20.20.120
ID Description Score Start End GO Terms
AF-A8U345-F1-model_v4 Dipeptide epimerase (EC 5.1.1.-) 0.9977 33 328 GO:0016855
GO:0046872
AF-G1XZN1-F1-model_v4 deleted 0.9975 162 328
AF-A0A545TYS9-F1-model_v4 Dipeptide epimerase (EC 5.1.1.-) 0.9966 5 328 GO:0016855
GO:0046872
AF-A0A7V5F2E1-F1-model_v4 Dipeptide epimerase (EC 5.1.1.-) 0.9948 5 301 GO:0016855
GO:0046872
AF-A0A529PFP6-F1-model_v4 Dipeptide epimerase 0.9948 244 328 GO:0016020

Map