F209397

General Info

Members Datasets Scaffolds Average Seq Length
150 88 300 625

Family's Representative Sequence

Representative Sequence 3300038742|Ga0400486_29955|Ga0400486_29955_7662_9863
Length 733
Sequence LFINNNWLVEISGSVKAPRPVWESVGPLHFYKGRRVGRQPPLDPAASPLTFANDTYNRKPLCASKDSAEFQGAGSPTMVGVDPLMRTSGAMFKKGHKSRMTSYLKTYDVIIVGGGHAGCEAALAAARMGCSTLLMAIDLDKIAAMPCSPSIGGMAKGQLVREVDALGGEMAKIADRTAIQYKMLNTKKGPAVQSSRTQNDKKRYHMAMKALIERQPNLDVKQALVEELVVENHRVMGVADNTGYGYQAKAVVLATGTFLSGLIHIGFKSIKSGRAGEFAAYGLARSLARQGFQLGRMKTGTPPRLARGTIDFSKFTAQPVEADQRPFSFSSDRFILPQITSYIGHTSETAHQLVRDNLHLSALHSGIIKGVPARYCPSFEDKIVRFPDKERHQVILEPEGLDTEEVYASGLGNSLPLEVQIQVVRSVEGLQEAEIMRPAYAIEYDYVDPIQLKPTLETRRVAGLYLAGQINGTSGYEEAAAQGLWAGINAASQIQGRPEFVLHRSQAYMAVMVDDLVTRGTREPYRMFTSRAEYRLMLREDNADLRLMQIGHELGLVSADTALDAAERKRQIADEIQRIRRTVIKPLPEVNAYLCEQQTNPLSRAVHLDQLLKRAQVGYDAVEKLAPAQEPPDPRVARQAEIEIKYEGYIQRHLAEIERFKHLESIRLPDNFDFHQVHGLSNELKEKLSSVRPVSLGQASRISGITPAAISVLMVAVKASKQGDHDGKRAENR

Samples

Sample ID Description Type Environment
1 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
47 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
51 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
54 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
55 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
56 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
57 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
58 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
59 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
60 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
63 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
64 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
65 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
66 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
67 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
68 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
69 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
70 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
71 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
72 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
73 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
77 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
82 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
83 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
84 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
85 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
86 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
87 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
88 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.33
Metatranscriptomes 0
Isolates 0.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0400486_29955 3300038742 Bacteria 36923
2 Ga0070670_100018658 3300005331 Bacteria 5945
3 Ga0070666_10013570 3300005335 Bacteria 5173
4 Ga0070675_100002434 3300005354 Bacteria 13901
5 Ga0070675_100012001 3300005354 Bacteria 6791
6 Ga0070708_100002713 3300005445 Bacteria 13734
7 Ga0070708_100003420 3300005445 Bacteria 12428
8 Ga0070708_100019389 3300005445 Bacteria 5715
9 Ga0070678_100026760 3300005456 Bacteria 3905
10 Ga0070706_100003523 3300005467 Bacteria 15385
11 Ga0070706_100060261 3300005467 Bacteria 3503
12 Ga0070707_100003175 3300005468 Bacteria 15559
13 Ga0070707_100007274 3300005468 Bacteria 10279
14 Ga0070698_100000078 3300005471 Bacteria 74608
15 Ga0070698_100013799 3300005471 Bacteria 8548
16 Ga0070697_100000847 3300005536 Bacteria 23017
17 Ga0070695_100068539 3300005545 Bacteria 2317
18 Ga0070696_100076353 3300005546 Bacteria 2365
19 Ga0070665_100019241 3300005548 Bacteria 6850
20 Ga0070664_100122211 3300005564 Bacteria 2281
21 Ga0068864_100055350 3300005618 Bacteria 3425
22 Ga0068862_100062546 3300005844 Bacteria 3201
23 Ga0068862_100122982 3300005844 Bacteria 2289
24 Ga0075428_100000300 3300006844 Bacteria 48524
25 Ga0075428_100017503 3300006844 Bacteria 7917
26 Ga0075428_100033990 3300006844 Bacteria 5625
27 Ga0075431_100009587 3300006847 Bacteria 9722
28 Ga0075433_10000283 3300006852 Bacteria 30231
29 Ga0075433_10000746 3300006852 Bacteria 22338
30 Ga0075433_10003450 3300006852 Bacteria 12198
31 Ga0075433_10068163 3300006852 Bacteria 3123
32 Ga0075434_100002358 3300006871 Bacteria 16546
33 Ga0075434_100035360 3300006871 Bacteria 4939
34 Ga0075436_100018378 3300006914 Bacteria 4787
35 Ga0075435_100000196 3300007076 Bacteria 36665
36 Ga0111539_10000061 3300009094 Bacteria 110783
37 Ga0111539_10024873 3300009094 Bacteria 7343
38 Ga0111539_10053206 3300009094 Bacteria 4819
39 Ga0111539_10139964 3300009094 Bacteria 2833
40 Ga0114129_10000763 3300009147 Bacteria 41055
41 Ga0114129_10005893 3300009147 Bacteria 17357
42 Ga0114129_10017176 3300009147 Bacteria 10305
43 Ga0105248_10136016 3300009177 Bacteria 2772
44 Ga0157374_10010362 3300013296 Bacteria 8019
45 Ga0163163_10005839 3300014325 Bacteria 10705
46 Ga0163163_10021248 3300014325 Bacteria 6122
47 Ga0207697_10002123 3300025315 Bacteria 10404
48 Ga0207684_10011790 3300025910 Bacteria 7624
49 Ga0207684_10055872 3300025910 Bacteria 3349
50 Ga0207646_10004954 3300025922 Bacteria 14230
51 Ga0207646_10005044 3300025922 Bacteria 14048
52 Ga0207659_10019364 3300025926 Bacteria 4479
53 Ga0207704_10009680 3300025938 Bacteria 4663
54 Ga0207691_10001211 3300025940 Bacteria 25698
55 Ga0207711_10027081 3300025941 Bacteria 4813
56 Ga0207679_10119046 3300025945 Bacteria 2099
57 Ga0207658_10066754 3300025986 Bacteria 2707
58 Ga0207678_10061157 3300026067 Bacteria 3239
59 Ga0207708_10069081 3300026075 Bacteria 2704
60 Ga0207676_10013018 3300026095 Bacteria 5973
61 Ga0207675_100030113 3300026118 Bacteria 5054
62 Ga0207683_10001572 3300026121 Bacteria 20567
63 Ga0209983_1000123 3300027665 Bacteria 13740
64 Ga0209971_1000139 3300027682 Bacteria 21827
65 Ga0209998_10005102 3300027717 Bacteria 2758
66 Ga0209974_10000401 3300027876 Bacteria 14419
67 Ga0207428_10007423 3300027907 Bacteria 9994
68 Ga0207428_10027197 3300027907 Bacteria 4764
69 Ga0268266_10138563 3300028379 Bacteria 2182
70 Ga0268265_10103283 3300028380 Bacteria 2308
71 Ga0268264_10138078 3300028381 Bacteria 2170
72 Ga0265320_10004482 3300031240 Bacteria 9143
73 Ga0316579_10006091 3300031691 Bacteria 4900
74 Ga0265314_10043046 3300031711 Bacteria 3214
75 Ga0316576_10000114 3300031727 Bacteria 30289
76 Ga0316578_10000215 3300031728 Bacteria 16628
77 Ga0316577_10001921 3300031733 Bacteria 10063
78 Ga0316577_10004236 3300031733 Bacteria 7374
79 Ga0316577_10060007 3300031733 Bacteria 2123
80 Ga0307415_100058507 3300032126 Bacteria 2654
81 Ga0316583_10001341 3300032133 Bacteria 8142
82 Ga0316583_10022639 3300032133 Bacteria 2249
83 Ga0316585_10000791 3300032137 Bacteria 7963
84 Ga0316585_10017819 3300032137 Bacteria 2150
85 Ga0316580_10000102 3300032139 Bacteria 15459
86 Ga0373931_0038222 3300035691 Bacteria 2510
87 Ga0373937_0036706 3300036401 Bacteria 4466
88 Ga0316582_0000794 3300036647 Bacteria 12796
89 Ga0316582_0020849 3300036647 Bacteria 3862
90 Ga0316582_0037986 3300036647 Bacteria 2989
91 Ga0316584_0006253 3300036712 Bacteria 8068
92 Ga0316584_0010262 3300036712 Bacteria 6543
93 Ga0316584_0011332 3300036712 Bacteria 6262
94 Ga0316584_0027780 3300036712 Bacteria 4166
95 Ga0316584_0101189 3300036712 Bacteria 2158
96 Ga0316581_0002384 3300037588 Bacteria 4482
97 Ga0316581_0016198 3300037588 Bacteria 2138
98 Ga0400484_28002 3300038725 Bacteria 5996
99 Ga0400491_05185 3300038727 Bacteria 3937
100 Ga0400491_12229 3300038727 Bacteria 10071
101 Ga0400485_02583 3300038735 Bacteria 28656
102 Ga0400485_18259 3300038735 Bacteria 26504
103 Ga0400485_18995 3300038735 Bacteria 13575
104 Ga0400485_21301 3300038735 Bacteria 9919
105 Ga0400488_09841 3300038741 Bacteria 10557
106 Ga0400488_50337 3300038741 Bacteria 7160
107 Ga0400486_01597 3300038742 Bacteria 18703
108 Ga0400486_04029 3300038742 Bacteria 63930
109 Ga0400486_14505 3300038742 Bacteria 66302
110 Ga0400483_091004 3300039062 Bacteria 29452
111 Ga0400483_113132 3300039062 Bacteria 4587
112 Ga0400483_152019 3300039062 Bacteria 44527
113 Ga0400483_253927 3300039062 Bacteria 3906
114 Ga0400483_291586 3300039062 Bacteria 7378
115 Ga0400489_12991 3300039093 Bacteria 13674
116 Ga0400489_20992 3300039093 Bacteria 17461
117 Ga0400489_71168 3300039093 Bacteria 34714
118 Ga0400489_88598 3300039093 Bacteria 9730
119 Ga0400489_93277 3300039093 Bacteria 9355
120 Ga0400487_09076 3300039110 Bacteria 9958
121 Ga0400487_25326 3300039110 Bacteria 41174
122 Ga0436363_0025868 3300039450 Bacteria 14745
123 Ga0451577_0000046 3300042876 Bacteria 320581
124 Ga0453684_0000178 3300044712 Bacteria 282502
125 Ga0453684_0000516 3300044712 Bacteria 147788
126 Ga0453684_0005757 3300044712 Bacteria 24209
127 Ga0451576_0000379 3300045051 Bacteria 104282
128 Ga0451576_0010259 3300045051 Bacteria 10765
129 Ga0495580_0000507 3300046472 Bacteria 32750
130 Ga0501034_0004397 3300049571 Bacteria 15698
131 Ga0501034_0047169 3300049571 Bacteria 4352
132 Ga0501037_0009007 3300049573 Bacteria 7311
133 Ga0501080_0040141 3300049742 Bacteria 4366
134 Ga0501080_0043196 3300049742 Bacteria 4197
135 Ga0501080_0117080 3300049742 Bacteria 2470
136 Ga0501044_0001192 3300049823 Bacteria 30819
137 nmdc:mga05p37_119151_c1 3300050507 Bacteria 3243
138 nmdc:mga05p37_39158_c1 3300050507 Bacteria 5817
139 nmdc:mga06r32_12140_c1 3300050510 Bacteria 7771
140 nmdc:mga08y16_7324_c1 3300050511 Bacteria 11577
141 nmdc:mga08y16_889_c1 3300050511 Bacteria 28818
142 nmdc:mga0n895_20308_c1 3300050512 Bacteria 6192
143 nmdc:mga0n895_59656_c1 3300050512 Bacteria 3764
144 nmdc:mga0rr50_11291_c1 3300050513 Bacteria 5711
145 nmdc:mga0a205_13398_c1 3300050515 Bacteria 6747
146 nmdc:mga0a205_14_c2 3300050515 Bacteria 99560
147 nmdc:mga0a205_156_c1 3300050515 Bacteria 44553
148 nmdc:mga0a205_26075_c1 3300050515 Bacteria 5569
149 Ga0501082_0052863 3300060353 Bacteria 3502
150 2740991510 2740891818 Bacteria 6711283
151 Ga0400486_29955
152 Ga0070670_100018658
153 Ga0070666_10013570
154 Ga0070675_100002434
155 Ga0070675_100012001
156 Ga0070708_100002713
157 Ga0070708_100003420
158 Ga0070708_100019389
159 Ga0070678_100026760
160 Ga0070706_100003523
161 Ga0070706_100060261
162 Ga0070707_100003175
163 Ga0070707_100007274
164 Ga0070698_100000078
165 Ga0070698_100013799
166 Ga0070697_100000847
167 Ga0070695_100068539
168 Ga0070696_100076353
169 Ga0070665_100019241
170 Ga0070664_100122211
171 Ga0068864_100055350
172 Ga0068862_100062546
173 Ga0068862_100122982
174 Ga0075428_100000300
175 Ga0075428_100017503
176 Ga0075428_100033990
177 Ga0075431_100009587
178 Ga0075433_10000283
179 Ga0075433_10000746
180 Ga0075433_10003450
181 Ga0075433_10068163
182 Ga0075434_100002358
183 Ga0075434_100035360
184 Ga0075436_100018378
185 Ga0075435_100000196
186 Ga0111539_10000061
187 Ga0111539_10024873
188 Ga0111539_10053206
189 Ga0111539_10139964
190 Ga0114129_10000763
191 Ga0114129_10005893
192 Ga0114129_10017176
193 Ga0105248_10136016
194 Ga0157374_10010362
195 Ga0163163_10005839
196 Ga0163163_10021248
197 Ga0207697_10002123
198 Ga0207684_10011790
199 Ga0207684_10055872
200 Ga0207646_10004954
201 Ga0207646_10005044
202 Ga0207659_10019364
203 Ga0207704_10009680
204 Ga0207691_10001211
205 Ga0207711_10027081
206 Ga0207679_10119046
207 Ga0207658_10066754
208 Ga0207678_10061157
209 Ga0207708_10069081
210 Ga0207676_10013018
211 Ga0207675_100030113
212 Ga0207683_10001572
213 Ga0209983_1000123
214 Ga0209971_1000139
215 Ga0209998_10005102
216 Ga0209974_10000401
217 Ga0207428_10007423
218 Ga0207428_10027197
219 Ga0268266_10138563
220 Ga0268265_10103283
221 Ga0268264_10138078
222 Ga0265320_10004482
223 Ga0316579_10006091
224 Ga0265314_10043046
225 Ga0316576_10000114
226 Ga0316578_10000215
227 Ga0316577_10001921
228 Ga0316577_10004236
229 Ga0316577_10060007
230 Ga0307415_100058507
231 Ga0316583_10001341
232 Ga0316583_10022639
233 Ga0316585_10000791
234 Ga0316585_10017819
235 Ga0316580_10000102
236 Ga0373931_0038222
237 Ga0373937_0036706
238 Ga0316582_0000794
239 Ga0316582_0020849
240 Ga0316582_0037986
241 Ga0316584_0006253
242 Ga0316584_0010262
243 Ga0316584_0011332
244 Ga0316584_0027780
245 Ga0316584_0101189
246 Ga0316581_0002384
247 Ga0316581_0016198
248 Ga0400484_28002
249 Ga0400491_05185
250 Ga0400491_12229
251 Ga0400485_02583
252 Ga0400485_18259
253 Ga0400485_18995
254 Ga0400485_21301
255 Ga0400488_09841
256 Ga0400488_50337
257 Ga0400486_01597
258 Ga0400486_04029
259 Ga0400486_14505
260 Ga0400483_091004
261 Ga0400483_113132
262 Ga0400483_152019
263 Ga0400483_253927
264 Ga0400483_291586
265 Ga0400489_12991
266 Ga0400489_20992
267 Ga0400489_71168
268 Ga0400489_88598
269 Ga0400489_93277
270 Ga0400487_09076
271 Ga0400487_25326
272 Ga0436363_0025868
273 Ga0451577_0000046
274 Ga0453684_0000178
275 Ga0453684_0000516
276 Ga0453684_0005757
277 Ga0451576_0000379
278 Ga0451576_0010259
279 Ga0495580_0000507
280 Ga0501034_0004397
281 Ga0501034_0047169
282 Ga0501037_0009007
283 Ga0501080_0040141
284 Ga0501080_0043196
285 Ga0501080_0117080
286 Ga0501044_0001192
287 nmdc:mga05p37_119151_c1
288 nmdc:mga05p37_39158_c1
289 nmdc:mga06r32_12140_c1
290 nmdc:mga08y16_7324_c1
291 nmdc:mga08y16_889_c1
292 nmdc:mga0n895_20308_c1
293 nmdc:mga0n895_59656_c1
294 nmdc:mga0rr50_11291_c1
295 nmdc:mga0a205_13398_c1
296 nmdc:mga0a205_14_c2
297 nmdc:mga0a205_156_c1
298 nmdc:mga0a205_26075_c1
299 Ga0501082_0052863
300 2740991510

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01134

GIDA

Glucose inhibited division protein A

108

498

1

PF13932

GIDA_C

tRNA modifying enzyme MnmG/GidA C-terminal helical bundle

658

714

0.99

PF21680

GIDA_C_1st

tRNA modifying enzyme MnmG/GidA C-terminal helical domain

564

654

0.97

PF12831

FAD_oxidored

FAD dependent oxidoreductase

108

258

0.75

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

107

266

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zic-assembly2.cif.gz_BBB crystal structure of rat peroxisomal multifunctional enzyme type-1 (rpmfe1) complexed with 3s-hydroxybutanoyl-coa and nadh 0.9477 23 53
1zcj-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa dehydrogenase 0.944 23 53
3ces-assembly1.cif.gz_B crystal structure of e.coli mnmg (gida), a highly-conserved trna modifying enzyme 0.9437 21 564
3g05-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9401 21 566
6dv2-assembly1.cif.gz_H crystal structure of human mitochondrial trifunctional protein 0.9401 23 53
ID Description Score Start End Superfamily
af_Q9SHS2_67_292_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.988 21 242 3.50.50.60
af_Q54HW4_103_341_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9742 21 237 3.50.50.60
af_Q9Y2Z2_30_259_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9675 16 238 3.50.50.60
2e57B01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9651 21 474 3.50.50.60
af_O17762_3_218_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9625 23 54 3.40.50.720
ID Description Score Start End GO Terms
AF-K1R388-F1-model_v4 Glucose-inhibited division protein A-related protein 0.9963 22 137 GO:0002098
GO:0005829
GO:0030488
GO:0050660
AF-K1V0B4-F1-model_v4 Glucose-inhibited division protein A-related protein 0.9956 22 133 GO:0002098
GO:0005829
GO:0030488
GO:0050660
AF-A0A7V9GNU3-F1-model_v4 FAD-dependent oxidoreductase 0.995 22 123 GO:0002098
GO:0005829
GO:0030488
GO:0050660
AF-A0A535SKI9-F1-model_v4 FAD-dependent oxidoreductase 0.9949 21 131 GO:0002098
GO:0005829
GO:0030488
GO:0050660
AF-A0A3D4CH04-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.9949 22 125 GO:0002098
GO:0005829
GO:0030488
GO:0050660

Map