F209303

General Info

Members Datasets Scaffolds Average Seq Length
150 61 300 258

Family's Representative Sequence

Representative Sequence 3300035398|Ga0316574_0113764|Ga0316574_0113764_647_1504
Length 285
Sequence LIFQSCDLESGNIHPYKKIMANTIRQPAVAGTFYPADPQQLRDMVGGYLQDATRRQTGEVTVPKALIAPHAGYIYSGPVAASAYARLAPAHDKIKRVILLGPSHRVPLRGIATSSATHFQTPLGSIPLDRACIEQVEKFPQVVRLDEAHVAEHSLEVHLPFLQEVLDSFSLVPLVVGEASPAQVSEIIEALWDGPETLIVISSDLSHYHDYETARRLDSATSRAIEALQPESIQYEDACGRNPVNGLLELARRHGLHATTVDLRNSGDTAGPRDQVVGYGAYLIN

Samples

Sample ID Description Type Environment
1 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
2 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
3 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
4 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
5 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
6 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
7 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
8 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
9 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
10 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
11 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
12 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
13 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
14 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
15 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
16 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
17 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
18 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
19 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
20 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
21 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
22 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
23 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
24 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
25 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
26 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
27 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
28 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
29 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
30 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
31 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
32 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
33 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
34 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
35 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
36 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
37 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
38 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
39 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
40 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
41 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
42 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
43 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
44 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
45 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
46 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
47 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
48 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
49 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
50 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
51 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
52 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
53 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
54 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
55 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
56 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
57 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
58 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
59 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
60 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
61 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.33
Metatranscriptomes 8.67
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.67
Stem 0
Stem Tuber 0
Unclassified 8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316574_0113764 3300035398 Unclassified 1735
2 Ga0070697_100201311 3300005536 Bacteria 1693
3 Ga0068856_100076885 3300005614 Bacteria 3307
4 Ga0068864_100110387 3300005618 Bacteria 2449
5 Ga0068860_100144775 3300005843 Bacteria 2286
6 Ga0070712_100131533 3300006175 Bacteria 1897
7 Ga0075435_100023545 3300007076 Bacteria 4765
8 Ga0105249_10094465 3300009553 Bacteria 2802
9 Ga0207693_10102627 3300025915 Unclassified 2243
10 Ga0207646_10000346 3300025922 Bacteria 62858
11 Ga0207712_10058347 3300025961 Bacteria 2727
12 Ga0265326_10002299 3300028558 Bacteria 6458
13 Ga0265323_10000562 3300028653 Bacteria 20564
14 Ga0265323_10003861 3300028653 Bacteria 6523
15 Ga0265323_10028196 3300028653 Bacteria 2106
16 Ga0265338_10015282 3300028800 Bacteria 8450
17 Ga0265338_10203935 3300028800 Bacteria 1489
18 Ga0265330_10000612 3300031235 Bacteria 23038
19 Ga0265330_10000635 3300031235 Bacteria 22568
20 Ga0265330_10014605 3300031235 Bacteria 3641
21 Ga0265329_10000067 3300031242 Bacteria 46423
22 Ga0265316_10000074 3300031344 Bacteria 102906
23 Ga0265316_10026683 3300031344 Bacteria 4798
24 Ga0265316_10069360 3300031344 Bacteria 2720
25 Ga0265316_10102098 3300031344 Bacteria 2178
26 Ga0265316_10168191 3300031344 Bacteria 1636
27 Ga0265316_10186999 3300031344 Bacteria 1540
28 Ga0307509_10016876 3300031507 Bacteria 8424
29 Ga0316575_10140904 3300031665 Bacteria 992
30 Ga0316579_10000009 3300031691 Bacteria 47875
31 Ga0316579_10000817 3300031691 Bacteria 10754
32 Ga0316579_10002390 3300031691 Bacteria 7081
33 Ga0316579_10009337 3300031691 Bacteria 4121
34 Ga0316579_10010264 3300031691 Bacteria 3955
35 Ga0316579_10055263 3300031691 Archaea 1862
36 Ga0265342_10005116 3300031712 Bacteria 10106
37 Ga0265342_10028427 3300031712 Bacteria 3483
38 Ga0265342_10039017 3300031712 Bacteria 2888
39 Ga0316576_10000185 3300031727 Bacteria 26067
40 Ga0316576_10000773 3300031727 Bacteria 15979
41 Ga0316576_10009094 3300031727 Bacteria 6394
42 Ga0316576_10052767 3300031727 Bacteria 2961
43 Ga0316576_10170782 3300031727 Bacteria 1641
44 Ga0316576_10263874 3300031727 Unclassified 1292
45 Ga0316578_10000009 3300031728 Bacteria 44952
46 Ga0316578_10001423 3300031728 Bacteria 9692
47 Ga0316578_10013548 3300031728 Bacteria 4328
48 Ga0316578_10014151 3300031728 Bacteria 4253
49 Ga0316578_10015408 3300031728 Bacteria 4110
50 Ga0316578_10015764 3300031728 Bacteria 4072
51 Ga0316578_10032078 3300031728 Bacteria 2998
52 Ga0316578_10060230 3300031728 Unclassified 2234
53 Ga0316578_10135749 3300031728 Bacteria 1481
54 Ga0316577_10000067 3300031733 Bacteria 25978
55 Ga0316577_10004962 3300031733 Bacteria 6940
56 Ga0316577_10029203 3300031733 Bacteria 3078
57 Ga0316577_10039408 3300031733 Bacteria 2643
58 Ga0316577_10058160 3300031733 Bacteria 2158
59 Ga0316583_10016940 3300032133 Bacteria 2622
60 Ga0316583_10036093 3300032133 Bacteria 1754
61 Ga0316583_10039679 3300032133 Bacteria 1667
62 Ga0316583_10041488 3300032133 Bacteria 1629
63 Ga0316583_10070909 3300032133 Unclassified 1219
64 Ga0316585_10000158 3300032137 Bacteria 13474
65 Ga0316585_10000391 3300032137 Bacteria 10181
66 Ga0316585_10030396 3300032137 Bacteria 1694
67 Ga0316585_10062305 3300032137 Bacteria 1206
68 Ga0316580_10000106 3300032139 Bacteria 15370
69 Ga0316580_10026802 3300032139 Bacteria 1782
70 Ga0316580_10064424 3300032139 Archaea 1124
71 Ga0316593_10014489 3300032168 Bacteria 2353
72 Ga0316593_10033165 3300032168 Bacteria 1689
73 Ga0316593_10041069 3300032168 Unclassified 1539
74 Ga0316593_10076601 3300032168 Bacteria 1162
75 Ga0316593_10104455 3300032168 Unclassified 1008
76 Ga0316592_1020212 3300033524 Bacteria 1413
77 Ga0316588_1004450 3300033528 Bacteria 2655
78 Ga0316588_1038192 3300033528 Archaea 1143
79 Ga0316596_1007106 3300033541 Bacteria 2635
80 Ga0316596_1009754 3300033541 Bacteria 2308
81 Ga0316596_1011361 3300033541 Bacteria 2174
82 Ga0316596_1026991 3300033541 Bacteria 1481
83 Ga0316596_1050773 3300033541 Bacteria 1097
84 Ga0316574_0000017 3300035398 Bacteria 40949
85 Ga0316574_0002091 3300035398 Bacteria 9881
86 Ga0316574_0020326 3300035398 Unclassified 3930
87 Ga0316574_0021065 3300035398 Bacteria 3865
88 Ga0316574_0029212 3300035398 Bacteria 3329
89 Ga0316574_0089379 3300035398 Unclassified 1962
90 Ga0316574_0121875 3300035398 Archaea 1675
91 Ga0316574_0172351 3300035398 Bacteria 1393
92 Ga0373927_0093536 3300035695 Bacteria 1953
93 Ga0316582_0000014 3300036647 Bacteria 41505
94 Ga0316582_0000803 3300036647 Bacteria 12726
95 Ga0316582_0000945 3300036647 Bacteria 12018
96 Ga0316582_0001529 3300036647 Bacteria 10242
97 Ga0316582_0018517 3300036647 Bacteria 4055
98 Ga0316582_0018811 3300036647 Bacteria 4029
99 Ga0316582_0022246 3300036647 Bacteria 3761
100 Ga0316582_0044199 3300036647 Bacteria 2799
101 Ga0316582_0208240 3300036647 Bacteria 1335
102 Ga0316584_0000119 3300036712 Bacteria 33690
103 Ga0316584_0000178 3300036712 Bacteria 30470
104 Ga0316584_0000680 3300036712 Bacteria 18708
105 Ga0316584_0005171 3300036712 Bacteria 8721
106 Ga0316584_0005391 3300036712 Bacteria 8581
107 Ga0316584_0008252 3300036712 Bacteria 7170
108 Ga0316584_0028578 3300036712 Bacteria 4113
109 Ga0316584_0029909 3300036712 Bacteria 4022
110 Ga0316584_0048622 3300036712 Bacteria 3169
111 Ga0316584_0054249 3300036712 Unclassified 3000
112 Ga0316584_0065573 3300036712 Bacteria 2720
113 Ga0316584_0079888 3300036712 Bacteria 2450
114 Ga0316584_0250727 3300036712 Unclassified 1293
115 Ga0316584_0389805 3300036712 Unclassified 994
116 Ga0316584_0498397 3300036712 Bacteria 856
117 Ga0395899_0032914 3300037312 Bacteria 3896
118 Ga0316581_0005525 3300037588 Bacteria 3303
119 Ga0316581_0007794 3300037588 Bacteria 2891
120 Ga0395901_0062775 3300038443 Bacteria 3866
121 Ga0400487_44711 3300039110 Bacteria 17985
122 Ga0436362_1038884 3300039453 Bacteria 1587
123 Ga0451577_0013459 3300042876 Bacteria 7654
124 Ga0451577_0198417 3300042876 Bacteria 1811
125 Ga0451577_0272118 3300042876 Bacteria 1534
126 Ga0451577_0545348 3300042876 Bacteria 1053
127 Ga0453684_0000034 3300044712 Bacteria 728457
128 Ga0453684_0003834 3300044712 Bacteria 33170
129 Ga0453684_0025071 3300044712 Bacteria 8677
130 Ga0451576_0162551 3300045051 Bacteria 2330
131 Ga0451576_0197170 3300045051 Bacteria 2103
132 Ga0495650_0026131 3300046471 Bacteria 2722
133 Ga0501031_0184827 3300049568 Bacteria 1361
134 Ga0501036_0411725 3300049572 Bacteria 1127
135 Ga0501039_0033507 3300049575 Bacteria 3961
136 Ga0501040_0169960 3300049576 Bacteria 1543
137 Ga0501041_0171308 3300049577 Bacteria 1358
138 Ga0501043_0140619 3300049579 Bacteria 1891
139 Ga0501048_0124385 3300049582 Bacteria 1823
140 Ga0501070_0323643 3300049586 Bacteria 1254
141 Ga0501071_0054658 3300049587 Bacteria 2881
142 Ga0501074_0313806 3300049590 Bacteria 1114
143 Ga0501075_0042456 3300049591 Bacteria 3410
144 Ga0501076_0105328 3300049592 Bacteria 2276
145 Ga0501080_0344230 3300049742 Bacteria 1347
146 Ga0501081_0117563 3300049743 Bacteria 1891
147 Ga0501044_0306084 3300049823 Bacteria 1517
148 nmdc:mga0rr50_170264_c1 3300050513 Bacteria 1774
149 Ga0501084_0032945 3300054114 Bacteria 4335
150 Ga0530510_0063022 3300061734 Bacteria 2684
151 Ga0316574_0113764
152 Ga0070697_100201311
153 Ga0068856_100076885
154 Ga0068864_100110387
155 Ga0068860_100144775
156 Ga0070712_100131533
157 Ga0075435_100023545
158 Ga0105249_10094465
159 Ga0207693_10102627
160 Ga0207646_10000346
161 Ga0207712_10058347
162 Ga0265326_10002299
163 Ga0265323_10000562
164 Ga0265323_10003861
165 Ga0265323_10028196
166 Ga0265338_10015282
167 Ga0265338_10203935
168 Ga0265330_10000612
169 Ga0265330_10000635
170 Ga0265330_10014605
171 Ga0265329_10000067
172 Ga0265316_10000074
173 Ga0265316_10026683
174 Ga0265316_10069360
175 Ga0265316_10102098
176 Ga0265316_10168191
177 Ga0265316_10186999
178 Ga0307509_10016876
179 Ga0316575_10140904
180 Ga0316579_10000009
181 Ga0316579_10000817
182 Ga0316579_10002390
183 Ga0316579_10009337
184 Ga0316579_10010264
185 Ga0316579_10055263
186 Ga0265342_10005116
187 Ga0265342_10028427
188 Ga0265342_10039017
189 Ga0316576_10000185
190 Ga0316576_10000773
191 Ga0316576_10009094
192 Ga0316576_10052767
193 Ga0316576_10170782
194 Ga0316576_10263874
195 Ga0316578_10000009
196 Ga0316578_10001423
197 Ga0316578_10013548
198 Ga0316578_10014151
199 Ga0316578_10015408
200 Ga0316578_10015764
201 Ga0316578_10032078
202 Ga0316578_10060230
203 Ga0316578_10135749
204 Ga0316577_10000067
205 Ga0316577_10004962
206 Ga0316577_10029203
207 Ga0316577_10039408
208 Ga0316577_10058160
209 Ga0316583_10016940
210 Ga0316583_10036093
211 Ga0316583_10039679
212 Ga0316583_10041488
213 Ga0316583_10070909
214 Ga0316585_10000158
215 Ga0316585_10000391
216 Ga0316585_10030396
217 Ga0316585_10062305
218 Ga0316580_10000106
219 Ga0316580_10026802
220 Ga0316580_10064424
221 Ga0316593_10014489
222 Ga0316593_10033165
223 Ga0316593_10041069
224 Ga0316593_10076601
225 Ga0316593_10104455
226 Ga0316592_1020212
227 Ga0316588_1004450
228 Ga0316588_1038192
229 Ga0316596_1007106
230 Ga0316596_1009754
231 Ga0316596_1011361
232 Ga0316596_1026991
233 Ga0316596_1050773
234 Ga0316574_0000017
235 Ga0316574_0002091
236 Ga0316574_0020326
237 Ga0316574_0021065
238 Ga0316574_0029212
239 Ga0316574_0089379
240 Ga0316574_0121875
241 Ga0316574_0172351
242 Ga0373927_0093536
243 Ga0316582_0000014
244 Ga0316582_0000803
245 Ga0316582_0000945
246 Ga0316582_0001529
247 Ga0316582_0018517
248 Ga0316582_0018811
249 Ga0316582_0022246
250 Ga0316582_0044199
251 Ga0316582_0208240
252 Ga0316584_0000119
253 Ga0316584_0000178
254 Ga0316584_0000680
255 Ga0316584_0005171
256 Ga0316584_0005391
257 Ga0316584_0008252
258 Ga0316584_0028578
259 Ga0316584_0029909
260 Ga0316584_0048622
261 Ga0316584_0054249
262 Ga0316584_0065573
263 Ga0316584_0079888
264 Ga0316584_0250727
265 Ga0316584_0389805
266 Ga0316584_0498397
267 Ga0395899_0032914
268 Ga0316581_0005525
269 Ga0316581_0007794
270 Ga0395901_0062775
271 Ga0400487_44711
272 Ga0436362_1038884
273 Ga0451577_0013459
274 Ga0451577_0198417
275 Ga0451577_0272118
276 Ga0451577_0545348
277 Ga0453684_0000034
278 Ga0453684_0003834
279 Ga0453684_0025071
280 Ga0451576_0162551
281 Ga0451576_0197170
282 Ga0495650_0026131
283 Ga0501031_0184827
284 Ga0501036_0411725
285 Ga0501039_0033507
286 Ga0501040_0169960
287 Ga0501041_0171308
288 Ga0501043_0140619
289 Ga0501048_0124385
290 Ga0501070_0323643
291 Ga0501071_0054658
292 Ga0501074_0313806
293 Ga0501075_0042456
294 Ga0501076_0105328
295 Ga0501080_0344230
296 Ga0501081_0117563
297 Ga0501044_0306084
298 nmdc:mga0rr50_170264_c1
299 Ga0501084_0032945
300 Ga0530510_0063022

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01875

Memo

Memo-like protein

26

283

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7m8h-assembly4.cif.gz_D structure of memo1 c244s metal binding site mutant at 1.75a 0.8899 1 260
7m8h-assembly4.cif.gz_D structure of memo1 c244s metal binding site mutant at 1.75a 0.8834 1 260
3bcz-assembly1.cif.gz_A crystal structure of memo 0.8791 1 260
3bcz-assembly1.cif.gz_A crystal structure of memo 0.8728 1 260
5hee-assembly1.cif.gz_B crystal structure of the tk2203 protein 0.6801 37 259
ID Description Score Start End Superfamily
af_Q54NZ1_1_286_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.9035 2 260 3.40.830.10
af_A4ICL8_45_369_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.8977 3 261 3.40.830.10
af_Q9VG04_2_293_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.8969 3 261 3.40.830.10
af_Q54NZ1_1_286_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.8936 2 260 3.40.830.10
af_C0H4B1_3_295_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.8898 3 260 3.40.830.10
ID Description Score Start End GO Terms
AF-A0A537MS75-F1-model_v4 AmmeMemoRadiSam system protein B 0.9907 2 153
AF-A0A1I4N0D4-F1-model_v4 AmmeMemoRadiSam system protein B 0.9893 1 201
AF-R7TR82-F1-model_v4 AmmeMemoRadiSam system protein B 0.9882 1 156
AF-A0A7C3GUW8-F1-model_v4 AmmeMemoRadiSam system protein B 0.9878 1 231
AF-A0A6I7WWG4-F1-model_v4 AmmeMemoRadiSam system protein B 0.9845 2 167

Map