F208954

General Info

Members Datasets Scaffolds Average Seq Length
150 80 150 230

Family's Representative Sequence

Representative Sequence 3300025929|Ga0207664_10315001|Ga0207664_103150012
Length 267
Sequence MPIVRMPVSTATPSAAARVESEPTPAAAFVAKIVRRPVKITLVRHATLLLETSHGLVLVDPMLAAAGSTEPVADTPHQARNPLVELPSAAEAVVRGVDLCIVTHLHGDHFDDAADAVLPRDVPILTQPESAGPLRERGFTDVATAHESIPMTRGRHGWGELGEAMGAVSGWVIDGVYIAGDTVWCDDVRSALEVHQPRAVIVNGSGARFNEGGPIVMDTGDVLLTREAAGVPVAVVHLEAINHCIEPRAAYRALGAVVPELGETFEL

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
17 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
20 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
21 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
22 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
23 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
24 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
25 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
26 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
38 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
39 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
40 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
41 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
42 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
43 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
44 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
45 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
46 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
47 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
48 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
49 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
50 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
51 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
52 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
53 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
54 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
55 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
56 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
57 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
58 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
59 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
60 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
61 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
62 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
63 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
64 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
65 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
66 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
67 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
68 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
69 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
70 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
71 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
73 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
74 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
75 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
76 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
77 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
78 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
79 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
80 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96
Metatranscriptomes 4
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 9.33
Rhizosphere 90.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100009572 3300005329 Bacteria 8295
2 Ga0070680_100013683 3300005336 Bacteria 6326
3 Ga0070680_100402333 3300005336 Unclassified 1167
4 Ga0070660_100012459 3300005339 Bacteria 6072
5 Ga0070714_100010464 3300005435 Bacteria 7333
6 Ga0070714_100179870 3300005435 Unclassified 1924
7 Ga0070713_100541137 3300005436 Bacteria 1102
8 Ga0070710_10273008 3300005437 Bacteria 1094
9 Ga0070711_100139791 3300005439 Bacteria 1814
10 Ga0070681_10006115 3300005458 Bacteria 11682
11 Ga0070681_10159932 3300005458 Unclassified 2176
12 Ga0070679_100252378 3300005530 Bacteria 1720
13 Ga0070684_100002166 3300005535 Bacteria 14495
14 Ga0070684_100052347 3300005535 Bacteria 3551
15 Ga0068853_100362287 3300005539 Bacteria 1351
16 Ga0070686_100693211 3300005544 Archaea 812
17 Ga0068855_100030931 3300005563 Bacteria 6397
18 Ga0068856_100383481 3300005614 Bacteria 1425
19 Ga0068852_100207964 3300005616 Bacteria 1855
20 Ga0070715_10198317 3300006163 Bacteria 1018
21 Ga0075435_100005481 3300007076 Bacteria 8869
22 Ga0105240_10042424 3300009093 Bacteria 5797
23 Ga0105240_10150616 3300009093 Bacteria 2771
24 Ga0105242_10009117 3300009176 Bacteria 7617
25 Ga0157370_10020603 3300013104 Bacteria 6582
26 Ga0157370_10033005 3300013104 Bacteria 5049
27 Ga0157369_10020330 3300013105 Bacteria 7421
28 Ga0157369_10912377 3300013105 Bacteria 901
29 Ga0182008_10016215 3300014497 Bacteria 3876
30 Ga0182007_10013630 3300015262 Bacteria 3093
31 Ga0206356_11160793 3300020070 Unclassified 1253
32 Ga0206356_11894494 3300020070 Bacteria 2139
33 Ga0206354_10077891 3300020081 Unclassified 1203
34 Ga0206353_10304413 3300020082 Bacteria 3983
35 Ga0206353_10612563 3300020082 Bacteria 3873
36 Ga0206353_12059787 3300020082 Bacteria 2219
37 Ga0207692_10144570 3300025898 Bacteria 1356
38 Ga0207707_10029416 3300025912 Bacteria 4802
39 Ga0207707_10055171 3300025912 Bacteria 3457
40 Ga0207660_10104099 3300025917 Bacteria 2125
41 Ga0207660_10183255 3300025917 Bacteria 1627
42 Ga0207657_10002431 3300025919 Bacteria 20110
43 Ga0207652_10022715 3300025921 Bacteria 5194
44 Ga0207652_10124195 3300025921 Bacteria 2298
45 Ga0207652_10469665 3300025921 Unclassified 1133
46 Ga0207664_10070877 3300025929 Bacteria 2806
47 Ga0207664_10315001 3300025929 Unclassified 1379
48 Ga0207686_10419601 3300025934 Bacteria 1023
49 Ga0207667_10128178 3300025949 Bacteria 2614
50 Ga0207702_10491526 3300026078 Bacteria 1195
51 Ga0207674_10167678 3300026116 Bacteria 2149
52 Ga0373943_0044302 3300035170 Unclassified 2165
53 Ga0373946_0141543 3300035171 Unclassified 1115
54 Ga0373935_0317039 3300035692 Unclassified 1105
55 Ga0373947_0006384 3300035725 Bacteria 6851
56 Ga0373925_0042458 3300037068 Bacteria 3373
57 Ga0395899_0031118 3300037312 Bacteria 4011
58 Ga0395899_0165328 3300037312 Bacteria 1561
59 Ga0395900_0239116 3300037418 Unclassified 1822
60 Ga0395898_0001313 3300037466 Bacteria 36176
61 Ga0395898_0080854 3300037466 Bacteria 3134
62 Ga0395898_0112319 3300037466 Bacteria 2611
63 Ga0395898_0322035 3300037466 Bacteria 1475
64 Ga0395905_0125209 3300037471 Unclassified 2416
65 Ga0395905_0161606 3300037471 Bacteria 2105
66 Ga0395901_0002853 3300038443 Bacteria 17452
67 Ga0395901_0010015 3300038443 Bacteria 9609
68 Ga0395901_0084314 3300038443 Bacteria 3321
69 Ga0395901_0207694 3300038443 Bacteria 2051
70 Ga0395901_0920856 3300038443 Archaea 855
71 Ga0466965_0126793 3300044683 Bacteria 1321
72 Ga0466966_0024630 3300044684 Bacteria 3936
73 Ga0466961_0002965 3300044693 Bacteria 10538
74 Ga0466963_0006205 3300044694 Bacteria 7058
75 Ga0466963_0025118 3300044694 Unclassified 3797
76 Ga0466963_0028379 3300044694 Bacteria 3592
77 Ga0466963_0039676 3300044694 Bacteria 3084
78 Ga0466963_0168844 3300044694 Bacteria 1524
79 Ga0466963_0268663 3300044694 Bacteria 1198
80 Ga0466964_0049799 3300044706 Unclassified 1716
81 Ga0466964_0097157 3300044706 Bacteria 1292
82 Ga0466964_0138002 3300044706 Bacteria 1118
83 Ga0466971_0029589 3300044719 Bacteria 2450
84 Ga0466971_0116971 3300044719 Bacteria 1233
85 Ga0466968_0052936 3300044735 Bacteria 1738
86 Ga0466957_0002929 3300044842 Bacteria 9249
87 Ga0466957_0126143 3300044842 Unclassified 1636
88 Ga0466957_0226727 3300044842 Bacteria 1235
89 Ga0466957_0435570 3300044842 Bacteria 901
90 Ga0466959_0159395 3300045049 Bacteria 1587
91 Ga0466959_0200293 3300045049 Bacteria 1390
92 Ga0466958_0006009 3300045836 Bacteria 6576
93 Ga0466958_0016083 3300045836 Unclassified 4303
94 Ga0466958_0021550 3300045836 Bacteria 3768
95 Ga0466958_0103112 3300045836 Bacteria 1776
96 Ga0466958_0410613 3300045836 Bacteria 875
97 Ga0466967_0003222 3300045976 Bacteria 10549
98 Ga0466967_0011475 3300045976 Bacteria 6714
99 Ga0466967_0012272 3300045976 Bacteria 6544
100 Ga0466967_0018090 3300045976 Bacteria 5622
101 Ga0466967_0033275 3300045976 Unclassified 4362
102 Ga0466967_0056815 3300045976 Bacteria 3452
103 Ga0466967_0065926 3300045976 Bacteria 3225
104 Ga0466967_0087315 3300045976 Bacteria 2827
105 Ga0466967_0088565 3300045976 Bacteria 2809
106 Ga0466967_0108769 3300045976 Bacteria 2544
107 Ga0466967_0126994 3300045976 Bacteria 2363
108 Ga0466967_0139228 3300045976 Bacteria 2259
109 Ga0466967_0483050 3300045976 Bacteria 1214
110 Ga0466967_0519263 3300045976 Bacteria 1170
111 Ga0466967_0605764 3300045976 Unclassified 1081
112 Ga0466967_0836615 3300045976 Bacteria 914
113 Ga0466967_1025323 3300045976 Unclassified 822
114 Ga0495603_0250274 3300046455 Bacteria 1020
115 Ga0495630_0432713 3300046517 Bacteria 1008
116 Ga0495586_0047000 3300046535 Unclassified 2328
117 Ga0495674_0211594 3300047319 Bacteria 1606
118 Ga0495684_0706255 3300047471 Bacteria 668
119 Ga0496100_0131286 3300048903 Bacteria 1764
120 Ga0496100_0229551 3300048903 Bacteria 1365
121 Ga0496101_0045507 3300048904 Bacteria 3143
122 Ga0496102_0018782 3300048905 Bacteria 6081
123 Ga0496102_0160863 3300048905 Bacteria 2112
124 Ga0496103_0076350 3300048906 Bacteria 2102
125 Ga0496103_0308773 3300048906 Bacteria 1017
126 Ga0496106_0152479 3300048909 Bacteria 1823
127 Ga0496106_0272071 3300048909 Bacteria 1356
128 Ga0496107_0082925 3300048910 Bacteria 2338
129 Ga0496107_0285820 3300048910 Bacteria 1227
130 Ga0496112_0018338 3300048915 Bacteria 6588
131 Ga0496112_0125438 3300048915 Bacteria 2538
132 Ga0496114_0045519 3300048917 Bacteria 3645
133 Ga0501047_0106273 3300049581 Bacteria 2687
134 Ga0501067_0263079 3300049583 Bacteria 960
135 Ga0501069_0028316 3300049585 Bacteria 3072
136 Ga0501069_0041457 3300049585 Bacteria 2545
137 Ga0501069_0124971 3300049585 Bacteria 1471
138 Ga0501069_0438669 3300049585 Bacteria 775
139 Ga0501070_0000677 3300049586 Bacteria 31275
140 Ga0501070_0425104 3300049586 Bacteria 1073
141 Ga0501074_0024338 3300049590 Bacteria 4400
142 Ga0501074_0088783 3300049590 Bacteria 2214
143 Ga0501080_0053492 3300049742 Bacteria 3760
144 Ga0501080_0181731 3300049742 Bacteria 1935
145 Ga0501080_0242920 3300049742 Bacteria 1643
146 Ga0501035_0644131 3300049822 Bacteria 860
147 nmdc:mga0n895_36331_c1 3300050512 Bacteria 4756
148 Ga0466962_0058216 3300061719 Bacteria 1845
149 Ga0466962_0076530 3300061719 Unclassified 1599
150 Ga0530510_0141674 3300061734 Bacteria 1772

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045976 Ga0466967_1025323 Ga0466967_1025323_29_643 203
2 3300047471 Ga0495684_0706255 Ga0495684_0706255_10_654 214
3 3300037466 Ga0395898_0322035 Ga0395898_0322035_554_1234 217
4 3300038443 Ga0395901_0010015 Ga0395901_0010015_8500_9162 220
5 3300044719 Ga0466971_0029589 Ga0466971_0029589_206_871 220
6 3300049742 Ga0501080_0242920 Ga0501080_0242920_635_1297 220
7 3300045976 Ga0466967_0836615 Ga0466967_0836615_117_782 221
8 3300014497 Ga0182008_10016215 Ga0182008_100162153 223
9 3300044683 Ga0466965_0126793 Ga0466965_0126793_183_854 223
10 3300044684 Ga0466966_0024630 Ga0466966_0024630_1396_2067 223
11 3300044693 Ga0466961_0002965 Ga0466961_0002965_2347_3018 223
12 3300044706 Ga0466964_0138002 Ga0466964_0138002_238_909 223
13 3300044719 Ga0466971_0116971 Ga0466971_0116971_358_1029 223
14 3300044735 Ga0466968_0052936 Ga0466968_0052936_578_1249 223
15 3300044842 Ga0466957_0226727 Ga0466957_0226727_406_1077 223
16 3300045049 Ga0466959_0200293 Ga0466959_0200293_256_927 223
17 3300045976 Ga0466967_0018090 Ga0466967_0018090_616_1290 223
18 3300005435 Ga0070714_100010464 Ga0070714_1000104643 225
19 3300015262 Ga0182007_10013630 Ga0182007_100136305 225
20 3300044694 Ga0466963_0168844 Ga0466963_0168844_358_1038 225
21 3300044706 Ga0466964_0097157 Ga0466964_0097157_313_993 225
22 3300045049 Ga0466959_0159395 Ga0466959_0159395_397_1077 225
23 3300045836 Ga0466958_0006009 Ga0466958_0006009_1164_1844 225
24 3300045976 Ga0466967_0056815 Ga0466967_0056815_1333_2013 225
25 3300045976 Ga0466967_0065926 Ga0466967_0065926_389_1069 225
26 3300045976 Ga0466967_0108769 Ga0466967_0108769_782_1462 225
27 3300045976 Ga0466967_0139228 Ga0466967_0139228_1360_2040 225
28 3300049583 Ga0501067_0263079 Ga0501067_0263079_181_861 225
29 3300049585 Ga0501069_0438669 Ga0501069_0438669_21_701 225
30 3300049586 Ga0501070_0425104 Ga0501070_0425104_366_1046 225
31 3300061734 Ga0530510_0141674 Ga0530510_0141674_673_1353 225
32 3300044694 Ga0466963_0039676 Ga0466963_0039676_2163_2846 226
33 3300045976 Ga0466967_0012272 Ga0466967_0012272_4782_5465 226
34 3300045976 Ga0466967_0519263 Ga0466967_0519263_81_764 226
35 3300005436 Ga0070713_100541137 Ga0070713_1005411372 227
36 3300005614 Ga0068856_100383481 Ga0068856_1003834812 227
37 3300009093 Ga0105240_10150616 Ga0105240_101506162 227
38 3300013104 Ga0157370_10020603 Ga0157370_100206034 227
39 3300013105 Ga0157369_10020330 Ga0157369_100203301 227
40 3300025929 Ga0207664_10070877 Ga0207664_100708772 227
41 3300026078 Ga0207702_10491526 Ga0207702_104915262 227
42 3300037312 Ga0395899_0031118 Ga0395899_0031118_1798_2484 227
43 3300037312 Ga0395899_0165328 Ga0395899_0165328_400_1083 227
44 3300037418 Ga0395900_0239116 Ga0395900_0239116_571_1257 227
45 3300037466 Ga0395898_0001313 Ga0395898_0001313_10133_10816 227
46 3300037466 Ga0395898_0112319 Ga0395898_0112319_571_1257 227
47 3300037471 Ga0395905_0125209 Ga0395905_0125209_1290_1976 227
48 3300037471 Ga0395905_0161606 Ga0395905_0161606_1110_1793 227
49 3300038443 Ga0395901_0002853 Ga0395901_0002853_10589_11272 227
50 3300038443 Ga0395901_0084314 Ga0395901_0084314_1485_2171 227
51 3300044694 Ga0466963_0006205 Ga0466963_0006205_1121_1810 227
52 3300044694 Ga0466963_0028379 Ga0466963_0028379_804_1496 227
53 3300044842 Ga0466957_0435570 Ga0466957_0435570_85_768 227
54 3300045836 Ga0466958_0021550 Ga0466958_0021550_966_1655 227
55 3300045836 Ga0466958_0103112 Ga0466958_0103112_196_879 227
56 3300045836 Ga0466958_0410613 Ga0466958_0410613_129_818 227
57 3300045976 Ga0466967_0011475 Ga0466967_0011475_791_1480 227
58 3300045976 Ga0466967_0088565 Ga0466967_0088565_157_840 227
59 3300045976 Ga0466967_0605764 Ga0466967_0605764_324_1013 227
60 3300049585 Ga0501069_0028316 Ga0501069_0028316_793_1476 227
61 3300049590 Ga0501074_0024338 Ga0501074_0024338_147_830 227
62 3300049742 Ga0501080_0181731 Ga0501080_0181731_793_1476 227
63 3300049822 Ga0501035_0644131 Ga0501035_0644131_50_733 227
64 3300005439 Ga0070711_100139791 Ga0070711_1001397912 228
65 3300026116 Ga0207674_10167678 Ga0207674_101676782 228
66 3300044694 Ga0466963_0268663 Ga0466963_0268663_14_715 228
67 3300045976 Ga0466967_0087315 Ga0466967_0087315_1601_2302 228
68 3300049585 Ga0501069_0124971 Ga0501069_0124971_357_1058 228
69 3300037466 Ga0395898_0080854 Ga0395898_0080854_22_720 229
70 3300038443 Ga0395901_0920856 Ga0395901_0920856_10_708 229
71 3300045976 Ga0466967_0126994 Ga0466967_0126994_106_798 229
72 3300049586 Ga0501070_0000677 Ga0501070_0000677_22800_23504 229
73 3300005435 Ga0070714_100179870 Ga0070714_1001798702 230
74 3300006163 Ga0070715_10198317 Ga0070715_101983172 230
75 3300025929 Ga0207664_10315001 Ga0207664_103150012 230
76 3300035170 Ga0373943_0044302 Ga0373943_0044302_250_942 230
77 3300035171 Ga0373946_0141543 Ga0373946_0141543_192_884 230
78 3300035692 Ga0373935_0317039 Ga0373935_0317039_394_1086 230
79 3300035725 Ga0373947_0006384 Ga0373947_0006384_5931_6623 230
80 3300037068 Ga0373925_0042458 Ga0373925_0042458_205_897 230
81 3300044842 Ga0466957_0126143 Ga0466957_0126143_203_895 230
82 3300045976 Ga0466967_0483050 Ga0466967_0483050_72_764 230
83 3300046455 Ga0495603_0250274 Ga0495603_0250274_112_804 230
84 3300046517 Ga0495630_0432713 Ga0495630_0432713_76_768 230
85 3300046535 Ga0495586_0047000 Ga0495586_0047000_872_1564 230
86 3300047319 Ga0495674_0211594 Ga0495674_0211594_93_785 230
87 3300061719 Ga0466962_0058216 Ga0466962_0058216_533_1225 230
88 3300005329 Ga0070683_100009572 Ga0070683_1000095727 231
89 3300005336 Ga0070680_100013683 Ga0070680_1000136835 231
90 3300005336 Ga0070680_100402333 Ga0070680_1004023332 231
91 3300005339 Ga0070660_100012459 Ga0070660_1000124594 231
92 3300005437 Ga0070710_10273008 Ga0070710_102730081 231
93 3300005458 Ga0070681_10006115 Ga0070681_1000611511 231
94 3300005458 Ga0070681_10159932 Ga0070681_101599323 231
95 3300005530 Ga0070679_100252378 Ga0070679_1002523782 231
96 3300005535 Ga0070684_100002166 Ga0070684_1000021665 231
97 3300005535 Ga0070684_100052347 Ga0070684_1000523474 231
98 3300005539 Ga0068853_100362287 Ga0068853_1003622872 231
99 3300005544 Ga0070686_100693211 Ga0070686_1006932111 231
100 3300005563 Ga0068855_100030931 Ga0068855_1000309318 231
101 3300005616 Ga0068852_100207964 Ga0068852_1002079642 231
102 3300007076 Ga0075435_100005481 Ga0075435_10000548110 231
103 3300009093 Ga0105240_10042424 Ga0105240_100424242 231
104 3300009176 Ga0105242_10009117 Ga0105242_100091175 231
105 3300013104 Ga0157370_10033005 Ga0157370_100330055 231
106 3300013105 Ga0157369_10912377 Ga0157369_109123771 231
107 3300020070 Ga0206356_11160793 Ga0206356_111607932 231
108 3300020070 Ga0206356_11894494 Ga0206356_118944944 231
109 3300020081 Ga0206354_10077891 Ga0206354_100778912 231
110 3300020082 Ga0206353_10304413 Ga0206353_103044134 231
111 3300020082 Ga0206353_10612563 Ga0206353_106125632 231
112 3300020082 Ga0206353_12059787 Ga0206353_120597871 231
113 3300025898 Ga0207692_10144570 Ga0207692_101445702 231
114 3300025912 Ga0207707_10029416 Ga0207707_100294163 231
115 3300025912 Ga0207707_10055171 Ga0207707_100551712 231
116 3300025917 Ga0207660_10104099 Ga0207660_101040992 231
117 3300025917 Ga0207660_10183255 Ga0207660_101832552 231
118 3300025919 Ga0207657_10002431 Ga0207657_1000243126 231
119 3300025921 Ga0207652_10022715 Ga0207652_100227152 231
120 3300025921 Ga0207652_10124195 Ga0207652_101241952 231
121 3300025921 Ga0207652_10469665 Ga0207652_104696652 231
122 3300025934 Ga0207686_10419601 Ga0207686_104196012 231
123 3300025949 Ga0207667_10128178 Ga0207667_101281782 231
124 3300038443 Ga0395901_0207694 Ga0395901_0207694_1215_1910 231
125 3300044694 Ga0466963_0025118 Ga0466963_0025118_723_1418 231
126 3300044706 Ga0466964_0049799 Ga0466964_0049799_367_1062 231
127 3300044842 Ga0466957_0002929 Ga0466957_0002929_3090_3785 231
128 3300045836 Ga0466958_0016083 Ga0466958_0016083_838_1533 231
129 3300045976 Ga0466967_0003222 Ga0466967_0003222_4464_5174 231
130 3300045976 Ga0466967_0033275 Ga0466967_0033275_1296_1991 231
131 3300048903 Ga0496100_0131286 Ga0496100_0131286_491_1186 231
132 3300048903 Ga0496100_0229551 Ga0496100_0229551_636_1331 231
133 3300048904 Ga0496101_0045507 Ga0496101_0045507_584_1279 231
134 3300048905 Ga0496102_0018782 Ga0496102_0018782_1627_2322 231
135 3300048905 Ga0496102_0160863 Ga0496102_0160863_793_1488 231
136 3300048906 Ga0496103_0076350 Ga0496103_0076350_524_1219 231
137 3300048906 Ga0496103_0308773 Ga0496103_0308773_46_741 231
138 3300048909 Ga0496106_0152479 Ga0496106_0152479_798_1493 231
139 3300048909 Ga0496106_0272071 Ga0496106_0272071_328_1023 231
140 3300048910 Ga0496107_0082925 Ga0496107_0082925_1599_2294 231
141 3300048910 Ga0496107_0285820 Ga0496107_0285820_76_771 231
142 3300048915 Ga0496112_0018338 Ga0496112_0018338_2677_3372 231
143 3300048915 Ga0496112_0125438 Ga0496112_0125438_200_895 231
144 3300048917 Ga0496114_0045519 Ga0496114_0045519_329_1024 231
145 3300049581 Ga0501047_0106273 Ga0501047_0106273_206_916 231
146 3300049585 Ga0501069_0041457 Ga0501069_0041457_1654_2364 231
147 3300049590 Ga0501074_0088783 Ga0501074_0088783_134_844 231
148 3300049742 Ga0501080_0053492 Ga0501080_0053492_2456_3166 231
149 3300050512 nmdc:mga0n895_36331_c1 nmdc:mga0n895_36331_c1_3905_4600 231
150 3300061719 Ga0466962_0076530 Ga0466962_0076530_538_1233 231

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13483

Lactamase_B_3

Beta-lactamase superfamily domain

39

179

0.84

PF12706

Lactamase_B_2

Beta-lactamase superfamily domain

56

237

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rpc-assembly2.cif.gz_C the crystal structure of a possible metal-dependent hydrolase from veillonella parvula dsm 2008 0.936 2 229
6brm-assembly4.cif.gz_G the crystal structure of isothiocyanate hydrolase from delia radicum gut bacteria 0.9247 1 230
3rpc-assembly2.cif.gz_C the crystal structure of a possible metal-dependent hydrolase from veillonella parvula dsm 2008 0.9205 2 229
6brm-assembly4.cif.gz_G the crystal structure of isothiocyanate hydrolase from delia radicum gut bacteria 0.9171 1 230
6brm-assembly3.cif.gz_F the crystal structure of isothiocyanate hydrolase from delia radicum gut bacteria 0.8921 1 230
ID Description Score Start End Superfamily
3rpcD00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8966 2 229 3.60.15.10
3rpcD00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8819 2 229 3.60.15.10
6brmH00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.8712 1 230 3.60.15.10
6brmH00 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.864 1 230 3.60.15.10
af_Q5ABA9_138_440_3.60.15.10 Alpha Beta;4-Layer Sandwich;Metallo-beta-lactamase; Chain A;Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.7576 2 228 3.60.15.10
ID Description Score Start End GO Terms
AF-A0A7Y5WYK6-F1-model_v4 MBL fold metallo-hydrolase 0.9931 1 231 GO:0016787
AF-A0A7V9WLU5-F1-model_v4 MBL fold metallo-hydrolase 0.9706 3 189 GO:0016787
AF-W2C7E8-F1-model_v4 Metallo-beta-lactamase domain-containing protein 0.9698 3 103
AF-A0A7V7BNH1-F1-model_v4 Metallo-beta-lactamase domain-containing protein 0.9666 3 106
AF-A0A1I6T129-F1-model_v4 Beta-lactamase superfamily domain-containing protein 0.9647 1 109

Feature Viewer

pLDDT pTM Quality
94.75 0.92 High
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Predicted Structure (AlphaFold2)

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