F207294

General Info

Members Datasets Scaffolds Average Seq Length
149 136 298 752

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_53724_c1|nmdc:mga06r32_53724_c1_129_2546
Length 805
Sequence MSTRGQSIAADWFTDEPNRRLRWVATGLLYLVLANLVAIAAFLGATARAQAAGAVAARVPVFVTPGEMRSGALLLRSDSDRYVEAPLVGTDVDLVVSGPTARARVTQIFHNPTDGWVEAVYVYPLPEGGAVDTLKMVVGDRIIVADVKERKIAREVYERAKSAGQKAGLIEQERPNIFTNSVANIGPRETVVVQIEYQETVRQSGDEFSLRVPLVVAPRYLPAPIVQGVDLVAGGWGWGRVADQVSDPASDRDRISPPVLDPRKHAPVNPVAITVRLQAGFPLAEVKSRHHAVTSESVEAGVRVIKLADGPVPADRDFELTWTPAQAAVPSVGLFRERIGDADYLLAFVTPPAVAPNEERRPRETVFVIDNSGSMGGTSMVQAKASFLYALGRLKPSDRFNVIRFDNTMDMLFPDSVPADAGPVAQAKAFVSALEARGGTEMVAPMKAALTDRRGGDGKELRQVIFLTDGEIGNEQQLCDTITAMRGRSRIFMVGIGSAPNSFLMTRAAELGRGTFTHIGAVDQVEERMRTLVEKLESPAVTNLTATFSAGRADATPAIMPDLYRGEPMALAARVSALAGSLEIKGMIGDRPWVVTLPLAQAVEGRGLSKLWARRKIADAEVARTLRQITPDEADARVLAVALDHHLVTRLTSLVAVDQTPSRPDGARLTRAEIPLNLPAGWDFDKVFGGERSSAPVPAERRADAEPARHAQLATYAAVAVSSAPKPAAKFVSAPGGGATLPQTATDAELRLWFGLLLCTGGLLLMVIWRRRQPLVLNRLRARRAGERSERPARQLYSARAGHSP

Samples

Sample ID Description Type Environment
1 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
9 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
14 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
15 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
16 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
22 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
23 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
24 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
26 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
27 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
28 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
29 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
35 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
36 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
37 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
38 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
39 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
40 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
41 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
42 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
43 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
44 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
45 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
46 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
47 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
48 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
49 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
50 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
51 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
52 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
53 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
54 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
55 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
56 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
57 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
58 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
59 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
60 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
63 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
64 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
65 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
66 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
67 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
68 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
69 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
70 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
71 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
72 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
73 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
74 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
75 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
76 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
77 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
78 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
79 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
80 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
81 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
82 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
83 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
84 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
85 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
86 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
87 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
88 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
89 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
90 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
91 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
92 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
93 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
94 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
95 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
96 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
97 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
101 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
102 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
103 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
106 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
107 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
108 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
109 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
110 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
111 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
112 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
113 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
114 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
115 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
116 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
117 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
118 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
119 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
120 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
121 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
122 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
123 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
124 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
125 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
126 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
127 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
128 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
129 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
130 2909042592 Labrys sp. LIt4 Isolate Nodule
131 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
132 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
133 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
134 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
135 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
136 8056967851 Bradyrhizobium zhengyangense WYCCWR 12678 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 87.92
Metatranscriptomes 0
Isolates 12.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.08
Nodule 2.01
Rhizoplane 3.36
Rhizosphere 68.46
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga06r32_53724_c1 3300050510 Bacteria 3860
2 JGI25151J46595_10000245 3300003187 Bacteria 63602
3 Ga0058692_1002286 3300003856 Bacteria 6481
4 Ga0065165_1002474 3300005262 Bacteria 15539
5 Ga0068868_100005078 3300005338 Bacteria 9243
6 Ga0070698_100014249 3300005471 Bacteria 8405
7 Ga0068853_100010103 3300005539 Bacteria 7627
8 Ga0068854_100022443 3300005578 Bacteria 4300
9 Ga0081540_1018979 3300005983 Bacteria 4199
10 Ga0081540_1033832 3300005983 Bacteria 2767
11 Ga0081539_10001647 3300005985 Bacteria 36272
12 Ga0075365_10022539 3300006038 Bacteria 3947
13 Ga0075428_100047321 3300006844 Bacteria 4725
14 Ga0075433_10026251 3300006852 Bacteria 4930
15 Ga0075434_100110596 3300006871 Bacteria 2758
16 Ga0099795_10000181 3300007788 Bacteria 10475
17 Ga0105240_10000352 3300009093 Bacteria 86113
18 Ga0105245_10008769 3300009098 Bacteria 8820
19 Ga0114129_10008003 3300009147 Bacteria 15056
20 Ga0099796_10000985 3300010159 Bacteria 5346
21 Ga0105239_10000207 3300010375 Bacteria 86761
22 Ga0105246_10008759 3300011119 Bacteria 6224
23 Ga0213875_10000116 3300021388 Bacteria 90170
24 Ga0209148_1000334 3300025254 Bacteria 64148
25 Ga0209455_1008047 3300025272 Bacteria 2907
26 Ga0209130_1000934 3300025284 Bacteria 23359
27 Ga0209025_1000192 3300025294 Bacteria 150108
28 Ga0209564_1001577 3300025295 Bacteria 22295
29 Ga0207426_1000301 3300025302 Bacteria 96798
30 Ga0207426_1001489 3300025302 Bacteria 19173
31 Ga0207707_10032152 3300025912 Bacteria 4594
32 Ga0207671_10018413 3300025914 Bacteria 5359
33 Ga0207694_10030190 3300025924 Bacteria 4139
34 Ga0207677_10011859 3300026023 Bacteria 4987
35 Ga0207674_10056639 3300026116 Bacteria 3979
36 Ga0209371_1000225 3300027312 Bacteria 73767
37 Ga0268256_1000179 3300030500 Bacteria 74966
38 Ga0265332_10000310 3300031238 Bacteria 37390
39 Ga0265340_10000573 3300031247 Bacteria 20425
40 Ga0265331_10021320 3300031250 Bacteria 3318
41 Ga0265342_10000175 3300031712 Bacteria 71083
42 Ga0373936_0000167 3300035113 Bacteria 21970
43 Ga0373953_0000383 3300035117 Bacteria 11974
44 Ga0373957_0013346 3300035120 Bacteria 2786
45 Ga0373946_0002437 3300035171 Bacteria 6579
46 Ga0373955_0000048 3300035172 Bacteria 48012
47 Ga0373924_0002434 3300035410 Bacteria 6264
48 Ga0373935_0000082 3300035692 Bacteria 41509
49 Ga0373927_0003898 3300035695 Bacteria 10583
50 Ga0373933_0000648 3300035724 Bacteria 21697
51 Ga0373947_0021909 3300035725 Bacteria 3703
52 Ga0373937_0000019 3300036401 Bacteria 138568
53 Ga0373925_0000026 3300037068 Bacteria 154713
54 Ga0395900_0000909 3300037418 Bacteria 38980
55 Ga0395898_0003767 3300037466 Bacteria 16795
56 Ga0495592_0000017 3300046454 Bacteria 142442
57 Ga0495638_0001355 3300046460 Bacteria 22467
58 Ga0495651_0001618 3300046462 Bacteria 17445
59 Ga0495651_0012413 3300046462 Bacteria 6569
60 Ga0495653_0000033 3300046463 Bacteria 131680
61 Ga0495662_0002681 3300046476 Bacteria 8989
62 Ga0495664_0000008 3300046477 Bacteria 307158
63 Ga0495608_0000014 3300046511 Bacteria 221042
64 Ga0495618_0000027 3300046514 Bacteria 112522
65 Ga0495618_0004561 3300046514 Bacteria 8501
66 Ga0495628_0000008 3300046516 Bacteria 284313
67 Ga0495630_0000293 3300046517 Bacteria 40084
68 Ga0495652_0000005 3300046529 Bacteria 524368
69 Ga0495640_0000017 3300046533 Bacteria 138688
70 Ga0495640_0020286 3300046533 Bacteria 4895
71 Ga0495640_0047035 3300046533 Bacteria 2987
72 Ga0495587_0000005 3300046536 Bacteria 358412
73 Ga0495645_0000007 3300046543 Bacteria 376299
74 Ga0495667_0000012 3300046559 Bacteria 220967
75 Ga0495634_0001489 3300046642 Bacteria 20720
76 Ga0495635_0000010 3300046663 Bacteria 246385
77 Ga0495657_0000108 3300046675 Bacteria 74508
78 Ga0495599_0000015 3300046678 Bacteria 175055
79 Ga0495623_0000102 3300046679 Bacteria 52100
80 Ga0495646_0000066 3300046680 Bacteria 50048
81 Ga0495658_0031297 3300046683 Bacteria 2897
82 Ga0495613_0033234 3300046689 Bacteria 3833
83 Ga0495600_0000128 3300046809 Bacteria 42559
84 Ga0495581_0033454 3300047315 Bacteria 2975
85 Ga0495604_0000001 3300047317 Bacteria 708627
86 Ga0495674_0000012 3300047319 Bacteria 270651
87 Ga0495680_0000409 3300047322 Bacteria 47939
88 Ga0495675_0000152 3300047444 Bacteria 48625
89 Ga0495684_0000022 3300047471 Bacteria 139507
90 Ga0495686_0000131 3300047472 Bacteria 152064
91 Ga0495686_0000498 3300047472 Bacteria 57708
92 Ga0495593_0003531 3300047673 Bacteria 9355
93 Ga0495602_0000106 3300048088 Bacteria 79677
94 Ga0495602_0021993 3300048088 Bacteria 6253
95 Ga0496100_0025796 3300048903 Bacteria 3596
96 Ga0496104_0001003 3300048907 Bacteria 24153
97 Ga0496104_0001514 3300048907 Bacteria 20053
98 Ga0496105_0018841 3300048908 Bacteria 5558
99 Ga0496114_0018568 3300048917 Bacteria 5625
100 Ga0496118_0010064 3300048921 Bacteria 9420
101 Ga0496119_0000627 3300048922 Bacteria 47668
102 Ga0496121_0000842 3300048924 Bacteria 55662
103 Ga0496121_0001823 3300048924 Bacteria 34373
104 Ga0496121_0026983 3300048924 Bacteria 5389
105 Ga0496122_0032033 3300048925 Bacteria 4357
106 Ga0496123_0015872 3300048926 Bacteria 6148
107 Ga0496125_0072495 3300048928 Bacteria 2683
108 Ga0496126_0006604 3300048929 Bacteria 12914
109 Ga0496126_0008263 3300048929 Bacteria 11239
110 Ga0501034_0034994 3300049571 Bacteria 5094
111 Ga0501043_0003550 3300049579 Bacteria 12809
112 Ga0501067_0001139 3300049583 Bacteria 14406
113 Ga0501068_0001190 3300049584 Bacteria 13850
114 Ga0501073_0000032 3300049589 Bacteria 110926
115 Ga0501077_0000001 3300049593 Bacteria 270489
116 Ga0501080_0000043 3300049742 Bacteria 80093
117 Ga0501044_0008337 3300049823 Bacteria 11358
118 nmdc:mga06z11_4082_c1 3300050494 Bacteria 5708
119 nmdc:mga06r32_38240_c1 3300050510 Bacteria 4544
120 nmdc:mga0a205_12173_c1 3300050515 Bacteria 7953
121 Ga0495601_0000011 3300053077 Bacteria 264937
122 Ga0495612_0000006 3300053078 Bacteria 269278
123 Ga0495595_0000021 3300053084 Bacteria 115921
124 Ga0495619_0000013 3300053085 Bacteria 264865
125 Ga0500643_000062 3300053087 Bacteria 122407
126 Ga0500583_0050904 3300053092 Bacteria 1922
127 Ga0500555_000723 3300053103 Bacteria 12312
128 Ga0500556_0000119 3300053104 Bacteria 68528
129 Ga0500595_017851 3300053119 Bacteria 2608
130 Ga0500652_025368 3300053131 Bacteria 2271
131 Ga0500616_0023337 3300053153 Bacteria 3446
132 2511392503 2511231027 Bacteria 5013807
133 2644354501 2643221663 Bacteria 3425771
134 2821445101 2821443989 Bacteria 7658172
135 2829746716 2829745981 Bacteria 5406054
136 2842874871 2842871566 Bacteria 4827117
137 2844321857 2844315083 Bacteria 8138177
138 2844537429 2844533157 Bacteria 7517899
139 2861695475 2861691609 Bacteria 5628931
140 2903727593 2903727486 Bacteria 8281579
141 2906602917 2906602504 Bacteria 8295279
142 2906633498 2906626472 Bacteria 8826946
143 2909043332 2909042592 Bacteria 6499737
144 2928525459 2928521798 Bacteria 4960112
145 2954012451 2954011201 Bacteria 4762601
146 3002145508 3002141150 Bacteria 5254435
147 3003667107 3003665799 Bacteria 7279786
148 3005602205 3005594810 Bacteria 8716512
149 8056970951 8056967851 Bacteria 9038162
150 nmdc:mga06r32_53724_c1
151 JGI25151J46595_10000245
152 Ga0058692_1002286
153 Ga0065165_1002474
154 Ga0068868_100005078
155 Ga0070698_100014249
156 Ga0068853_100010103
157 Ga0068854_100022443
158 Ga0081540_1018979
159 Ga0081540_1033832
160 Ga0081539_10001647
161 Ga0075365_10022539
162 Ga0075428_100047321
163 Ga0075433_10026251
164 Ga0075434_100110596
165 Ga0099795_10000181
166 Ga0105240_10000352
167 Ga0105245_10008769
168 Ga0114129_10008003
169 Ga0099796_10000985
170 Ga0105239_10000207
171 Ga0105246_10008759
172 Ga0213875_10000116
173 Ga0209148_1000334
174 Ga0209455_1008047
175 Ga0209130_1000934
176 Ga0209025_1000192
177 Ga0209564_1001577
178 Ga0207426_1000301
179 Ga0207426_1001489
180 Ga0207707_10032152
181 Ga0207671_10018413
182 Ga0207694_10030190
183 Ga0207677_10011859
184 Ga0207674_10056639
185 Ga0209371_1000225
186 Ga0268256_1000179
187 Ga0265332_10000310
188 Ga0265340_10000573
189 Ga0265331_10021320
190 Ga0265342_10000175
191 Ga0373936_0000167
192 Ga0373953_0000383
193 Ga0373957_0013346
194 Ga0373946_0002437
195 Ga0373955_0000048
196 Ga0373924_0002434
197 Ga0373935_0000082
198 Ga0373927_0003898
199 Ga0373933_0000648
200 Ga0373947_0021909
201 Ga0373937_0000019
202 Ga0373925_0000026
203 Ga0395900_0000909
204 Ga0395898_0003767
205 Ga0495592_0000017
206 Ga0495638_0001355
207 Ga0495651_0001618
208 Ga0495651_0012413
209 Ga0495653_0000033
210 Ga0495662_0002681
211 Ga0495664_0000008
212 Ga0495608_0000014
213 Ga0495618_0000027
214 Ga0495618_0004561
215 Ga0495628_0000008
216 Ga0495630_0000293
217 Ga0495652_0000005
218 Ga0495640_0000017
219 Ga0495640_0020286
220 Ga0495640_0047035
221 Ga0495587_0000005
222 Ga0495645_0000007
223 Ga0495667_0000012
224 Ga0495634_0001489
225 Ga0495635_0000010
226 Ga0495657_0000108
227 Ga0495599_0000015
228 Ga0495623_0000102
229 Ga0495646_0000066
230 Ga0495658_0031297
231 Ga0495613_0033234
232 Ga0495600_0000128
233 Ga0495581_0033454
234 Ga0495604_0000001
235 Ga0495674_0000012
236 Ga0495680_0000409
237 Ga0495675_0000152
238 Ga0495684_0000022
239 Ga0495686_0000131
240 Ga0495686_0000498
241 Ga0495593_0003531
242 Ga0495602_0000106
243 Ga0495602_0021993
244 Ga0496100_0025796
245 Ga0496104_0001003
246 Ga0496104_0001514
247 Ga0496105_0018841
248 Ga0496114_0018568
249 Ga0496118_0010064
250 Ga0496119_0000627
251 Ga0496121_0000842
252 Ga0496121_0001823
253 Ga0496121_0026983
254 Ga0496122_0032033
255 Ga0496123_0015872
256 Ga0496125_0072495
257 Ga0496126_0006604
258 Ga0496126_0008263
259 Ga0501034_0034994
260 Ga0501043_0003550
261 Ga0501067_0001139
262 Ga0501068_0001190
263 Ga0501073_0000032
264 Ga0501077_0000001
265 Ga0501080_0000043
266 Ga0501044_0008337
267 nmdc:mga06z11_4082_c1
268 nmdc:mga06r32_38240_c1
269 nmdc:mga0a205_12173_c1
270 Ga0495601_0000011
271 Ga0495612_0000006
272 Ga0495595_0000021
273 Ga0495619_0000013
274 Ga0500643_000062
275 Ga0500583_0050904
276 Ga0500555_000723
277 Ga0500556_0000119
278 Ga0500595_017851
279 Ga0500652_025368
280 Ga0500616_0023337
281 2511392503
282 2644354501
283 2821445101
284 2829746716
285 2842874871
286 2844321857
287 2844537429
288 2861695475
289 2903727593
290 2906602917
291 2906633498
292 2909043332
293 2928525459
294 2954012451
295 3002145508
296 3003667107
297 3005602205
298 8056970951

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08487

VIT

Vault protein inter-alpha-trypsin domain

87

197

0.97

PF13757

VIT_2

Vault protein inter-alpha-trypsin domain

75

151

0.95

PF13768

VWA_3

von Willebrand factor type A domain

363

518

0.94

PF13519

VWA_2

von Willebrand factor type A domain

365

471

0.83

PF00092

VWA

von Willebrand factor type A domain

364

531

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fzu-assembly2.cif.gz_B the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone, thr-val linker variant, expressed with sumo tag 0.8371 346 520
8fzv-assembly1.cif.gz_A the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone, ala-ala linker variant, expressed with sumo tag 0.8347 350 504
8fz4-assembly2.cif.gz_B the von willebrand factor a domain of anthrax toxin receptor 2 0.8344 349 518
3n2n-assembly1.cif.gz_B the crystal structure of tumor endothelial marker 8 (tem8) extracellular domain 0.8343 348 520
7n1o-assembly1.cif.gz_A the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone 0.8092 348 520
ID Description Score Start End Superfamily
af_F4IDC8_324_504_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.908 351 522 3.40.50.410
af_A0A0R4IHR3_369_544_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.9069 351 524 3.40.50.410
af_A0A2R8RUY6_878_1044_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.9039 351 515 3.40.50.410
af_Q6UXX5_281_469_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.902 351 522 3.40.50.410
af_Q55G98_315_487_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.9019 352 521 3.40.50.410
ID Description Score Start End GO Terms
AF-A0A819HR74-F1-model_v4 Poly [ADP-ribose] polymerase (PARP) (EC 2.4.2.-) 0.9047 58 200 GO:0003950
GO:0005737
AF-A0A3C0I130-F1-model_v4 VWFA domain-containing protein 0.8957 313 565
AF-A0A850X9M0-F1-model_v4 Poly [ADP-ribose] polymerase (PARP) (EC 2.4.2.-) 0.887 60 196 GO:0003950
GO:0005634
GO:0005737
GO:0016779
AF-A0A833HIG1-F1-model_v4 VWA domain-containing protein 0.8857 49 598
AF-A0A1D2M4X1-F1-model_v4 von Willebrand factor A domain-containing protein 5A 0.8801 341 518

Map