F207205

General Info

Members Datasets Scaffolds Average Seq Length
149 131 121 463

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0085307|Ga0501047_0085307_448_2001
Length 517
Sequence MTPRPTTTHPLTSSAVPGVPLTAATPHDATVRMPDGFLWGAATAAYQIEGAAHVDGRTDSIWDAFARVPGAVVDGDDGEVACDHYHRYADDVALMAGLGLGTYRFSTSWSRVRPDGGPVNPKGIDFYSRLVDELLDHEILPWVTLYHWDLPQALEEHGGWTNRDTAYRFAEYAADVHDALGDRVGVWTTLNEPWCSSFLSYTAGAHAPGRRSREAGLAAAHHLMLGHGLATAELRRRAPGANLGITLNLTVTDPVDPADERDRDAARRIDAQFNRVFLDPILRGAYPADLLTDLAEVGLDGVIDDVVHDGDLAVISTPIDTLGVNYYHGEAVSYRAPERELHGSAPVSRPTSSPYPAADGVQVHPRPLPVTAQDWEVQPEGLARLLVRVHEEYTAERGIALYVTENGAAYDDVVAEDGSVDDQDRLAFVDLHLRAIHDAITAGVDVRGYFAWSLLDNYEWAWGYSKRFGVVRVDYETQERTVKASGQWYAEIARTGVIPPLPAASLAALNHPSDTQE

Samples

Sample ID Description Type Environment
1 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
2 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
3 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
4 2643221553 Microbacterium sp. Root553 Isolate Unclassified
5 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
6 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
7 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
8 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
9 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
10 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
11 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
12 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
13 2855683550 Micromonospora sp. RP3T Isolate Unclassified
14 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
15 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
16 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
17 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
18 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
19 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
20 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
21 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
22 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
23 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
26 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
54 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
57 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
58 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
69 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
70 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
71 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
72 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
73 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
76 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
77 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
78 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
79 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
80 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
81 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
82 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
83 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
84 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
85 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
86 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
91 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
92 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
93 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
94 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
95 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
96 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
97 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
113 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
116 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
117 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
118 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
119 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
120 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
121 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
122 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
123 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
124 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
125 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
126 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
127 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
128 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
129 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
130 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
131 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.21
Metatranscriptomes 0
Isolates 18.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.04
Nodule 2.01
Rhizoplane 5.37
Rhizosphere 66.44
Stem 0
Stem Tuber 0
Unclassified 20.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10011009 3300003203 Bacteria 3980
2 Ga0070658_10003301 3300005327 Bacteria 13309
3 Ga0070683_100154380 3300005329 Bacteria 2177
4 Ga0070670_100005233 3300005331 Bacteria 10922
5 Ga0070714_100216666 3300005435 Bacteria 1758
6 Ga0070672_100010357 3300005543 Bacteria 6465
7 Ga0068855_100000930 3300005563 Bacteria 36451
8 Ga0068857_100017123 3300005577 Bacteria 6349
9 Ga0068856_100029210 3300005614 Bacteria 5386
10 Ga0068856_100069472 3300005614 Bacteria 3483
11 Ga0068852_100038828 3300005616 Bacteria 4004
12 Ga0081539_10005668 3300005985 Bacteria 12537
13 Ga0075365_10000832 3300006038 Bacteria 12765
14 Ga0075365_10084120 3300006038 Bacteria 2159
15 Ga0075431_100000225 3300006847 Bacteria 42245
16 Ga0105240_10151593 3300009093 Bacteria 2760
17 Ga0105245_10076988 3300009098 Bacteria 3040
18 Ga0114129_10263920 3300009147 Bacteria 2306
19 Ga0105248_10018363 3300009177 Bacteria 7726
20 Ga0105237_10063215 3300009545 Bacteria 3699
21 Ga0157370_10177632 3300013104 Bacteria 1979
22 Ga0163162_10013891 3300013306 Bacteria 7865
23 Ga0157372_10014843 3300013307 Bacteria 8341
24 Ga0207699_10056221 3300025906 Bacteria 2344
25 Ga0207650_10016923 3300025925 Bacteria 5100
26 Ga0207711_10011046 3300025941 Bacteria 7505
27 Ga0207661_10214550 3300025944 Bacteria 1698
28 Ga0207667_10000837 3300025949 Bacteria 39713
29 Ga0207702_10178246 3300026078 Bacteria 1955
30 Ga0207674_10027766 3300026116 Bacteria 5980
31 Ga0207698_10012396 3300026142 Bacteria 5576
32 Ga0268265_10103359 3300028380 Bacteria 2307
33 Ga0265338_10065989 3300028800 Bacteria 3135
34 Ga0307512_10083339 3300030522 Bacteria 2281
35 Ga0307513_10000005 3300031456 Bacteria 553227
36 Ga0307513_10225189 3300031456 Bacteria 1693
37 Ga0265313_10007604 3300031595 Bacteria 7357
38 Ga0307508_10004618 3300031616 Bacteria 13377
39 Ga0265314_10014618 3300031711 Bacteria 6267
40 Ga0307413_10023788 3300031824 Bacteria 3326
41 Ga0307410_10012443 3300031852 Bacteria 4922
42 Ga0307406_10016329 3300031901 Bacteria 4314
43 Ga0307409_100002933 3300031995 Bacteria 9067
44 Ga0307416_100001609 3300032002 Bacteria 12417
45 Ga0373925_0019562 3300037068 Bacteria 4927
46 Ga0395900_0024623 3300037418 Bacteria 6160
47 Ga0395898_0063791 3300037466 Bacteria 3575
48 Ga0395901_0242863 3300038443 Bacteria 1878
49 Ga0439466_0015056 3300041411 Bacteria 2812
50 Ga0439449_0033104 3300042007 Bacteria 1926
51 Ga0450906_002607 3300042145 Bacteria 3933
52 Ga0466969_0003165 3300044656 Bacteria 8766
53 Ga0466972_0008620 3300044658 Bacteria 5115
54 Ga0466965_0029657 3300044683 Bacteria 2663
55 Ga0466959_0022021 3300045049 Bacteria 4707
56 Ga0495641_0016116 3300046461 Bacteria 3948
57 Ga0495653_0056957 3300046463 Bacteria 2978
58 Ga0495580_0237305 3300046472 Bacteria 1251
59 Ga0495639_0096546 3300046475 Bacteria 1392
60 Ga0495594_0005021 3300046499 Bacteria 6809
61 Ga0495620_0031778 3300046515 Bacteria 2414
62 Ga0495645_0028254 3300046543 Bacteria 4076
63 Ga0496100_0003662 3300048903 Bacteria 8040
64 Ga0496105_0205866 3300048908 Bacteria 1605
65 Ga0496109_0052404 3300048912 Bacteria 3719
66 Ga0496110_0069022 3300048913 Bacteria 3129
67 Ga0496111_0005180 3300048914 Bacteria 8311
68 Ga0496112_0084147 3300048915 Bacteria 3146
69 Ga0496113_0069932 3300048916 Bacteria 2666
70 Ga0496114_0029376 3300048917 Bacteria 4518
71 Ga0496117_0000668 3300048920 Bacteria 54828
72 Ga0496118_0023278 3300048921 Bacteria 5386
73 Ga0496119_0040052 3300048922 Bacteria 3003
74 Ga0496122_0001668 3300048925 Bacteria 34430
75 Ga0496122_0019053 3300048925 Bacteria 6294
76 Ga0496123_0000363 3300048926 Bacteria 85560
77 Ga0496125_0000085 3300048928 Bacteria 218570
78 Ga0496125_0001000 3300048928 Bacteria 44080
79 Ga0496125_0006019 3300048928 Bacteria 13269
80 Ga0496125_0009995 3300048928 Bacteria 9643
81 Ga0496126_0013780 3300048929 Bacteria 8198
82 Ga0496126_0020506 3300048929 Bacteria 6476
83 Ga0501031_0021872 3300049568 Bacteria 4167
84 Ga0501031_0027255 3300049568 Bacteria 3725
85 Ga0501032_0005017 3300049569 Bacteria 9897
86 Ga0501033_0015348 3300049570 Bacteria 5811
87 Ga0501033_0045455 3300049570 Bacteria 3268
88 Ga0501034_0016111 3300049571 Bacteria 7669
89 Ga0501034_0027360 3300049571 Bacteria 5799
90 Ga0501036_0008240 3300049572 Bacteria 8543
91 Ga0501037_0009897 3300049573 Bacteria 6994
92 Ga0501038_0012875 3300049574 Bacteria 7633
93 Ga0501038_0018745 3300049574 Bacteria 6247
94 Ga0501038_0046904 3300049574 Bacteria 3745
95 Ga0501039_0004243 3300049575 Bacteria 10793
96 Ga0501041_0128389 3300049577 Bacteria 1579
97 Ga0501043_0049120 3300049579 Bacteria 3316
98 Ga0501046_0018673 3300049580 Bacteria 5763
99 Ga0501047_0005908 3300049581 Bacteria 11515
100 Ga0501047_0085307 3300049581 Bacteria 3034
101 Ga0501048_0004675 3300049582 Bacteria 10423
102 Ga0501068_0059562 3300049584 Bacteria 2318
103 Ga0501068_0139934 3300049584 Bacteria 1517
104 Ga0501070_0030807 3300049586 Bacteria 4493
105 Ga0501073_0000025 3300049589 Bacteria 127490
106 Ga0501073_0028237 3300049589 Bacteria 4009
107 Ga0501035_0067065 3300049822 Bacteria 3184
108 Ga0501044_0011145 3300049823 Bacteria 9749
109 Ga0501044_0038251 3300049823 Bacteria 5011
110 Ga0501045_0003099 3300049824 Bacteria 11367
111 Ga0501045_0059360 3300049824 Bacteria 2802
112 nmdc:mga00v17_30403_c1 3300050491 Bacteria 3178
113 nmdc:mga0yw44_61553_c1 3300050492 Bacteria 2304
114 nmdc:mga0k408_53040_c1 3300050493 Bacteria 2350
115 nmdc:mga06z11_13799_c1 3300050494 Bacteria 3561
116 nmdc:mga06r32_589_c1 3300050510 Bacteria 31615
117 Ga0500635_0000073 3300053080 Bacteria 65023
118 Ga0495595_0023808 3300053084 Bacteria 2700
119 Ga0500651_0006616 3300053093 Bacteria 6700
120 Ga0500573_0071574 3300053140 Bacteria 1977
121 Ga0501082_0188205 3300060353 Bacteria 1796

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046472 Ga0495580_0237305 Ga0495580_0237305_35_1174 372
2 3300050492 nmdc:mga0yw44_61553_c1 nmdc:mga0yw44_61553_c1_1037_2284 384
3 3300042145 Ga0450906_002607 Ga0450906_002607_1271_2605 408
4 3300053140 Ga0500573_0071574 Ga0500573_0071574_349_1782 412
5 iso_pu_bacteria 8047710418 8047717516 415
6 3300031824 Ga0307413_10023788 Ga0307413_100237882 416
7 3300031852 Ga0307410_10012443 Ga0307410_100124432 416
8 3300031901 Ga0307406_10016329 Ga0307406_100163293 416
9 3300031995 Ga0307409_100002933 Ga0307409_1000029335 416
10 3300032002 Ga0307416_100001609 Ga0307416_1000016097 416
11 3300046543 Ga0495645_0028254 Ga0495645_0028254_486_1922 425
12 3300048917 Ga0496114_0029376 Ga0496114_0029376_2703_4139 425
13 3300048921 Ga0496118_0023278 Ga0496118_0023278_2065_3447 425
14 3300009545 Ga0105237_10063215 Ga0105237_100632153 426
15 3300013306 Ga0163162_10013891 Ga0163162_100138912 426
16 3300013307 Ga0157372_10014843 Ga0157372_100148438 426
17 3300048914 Ga0496111_0005180 Ga0496111_0005180_6370_7809 426
18 3300048922 Ga0496119_0040052 Ga0496119_0040052_1001_2440 426
19 3300049577 Ga0501041_0128389 Ga0501041_0128389_128_1462 426
20 3300049824 Ga0501045_0059360 Ga0501045_0059360_217_1551 426
21 iso_pu_bacteria 2841957949 2841960697 427
22 3300046499 Ga0495594_0005021 Ga0495594_0005021_3384_4721 428
23 3300049568 Ga0501031_0027255 Ga0501031_0027255_1437_2861 429
24 3300049569 Ga0501032_0005017 Ga0501032_0005017_2002_3426 429
25 3300049570 Ga0501033_0015348 Ga0501033_0015348_4250_5674 429
26 3300049571 Ga0501034_0027360 Ga0501034_0027360_225_1649 429
27 3300049572 Ga0501036_0008240 Ga0501036_0008240_5894_7318 429
28 3300049573 Ga0501037_0009897 Ga0501037_0009897_1629_3053 429
29 3300049574 Ga0501038_0018745 Ga0501038_0018745_4743_6167 429
30 3300049575 Ga0501039_0004243 Ga0501039_0004243_4500_5924 429
31 3300049579 Ga0501043_0049120 Ga0501043_0049120_1360_2784 429
32 3300049580 Ga0501046_0018673 Ga0501046_0018673_569_1993 429
33 3300049581 Ga0501047_0005908 Ga0501047_0005908_4250_5674 429
34 3300049582 Ga0501048_0004675 Ga0501048_0004675_2361_3785 429
35 3300049584 Ga0501068_0059562 Ga0501068_0059562_190_1614 429
36 3300049586 Ga0501070_0030807 Ga0501070_0030807_783_2207 429
37 3300049589 Ga0501073_0028237 Ga0501073_0028237_1467_2891 429
38 3300049822 Ga0501035_0067065 Ga0501035_0067065_1064_2488 429
39 3300049823 Ga0501044_0011145 Ga0501044_0011145_4372_5796 429
40 3300049824 Ga0501045_0003099 Ga0501045_0003099_1710_3134 429
41 3300031595 Ga0265313_10007604 Ga0265313_100076041 433
42 3300031711 Ga0265314_10014618 Ga0265314_100146184 433
43 3300050493 nmdc:mga0k408_53040_c1 nmdc:mga0k408_53040_c1_76_1410 433
44 3300005614 Ga0068856_100029210 Ga0068856_1000292106 434
45 3300009093 Ga0105240_10151593 Ga0105240_101515933 434
46 3300013104 Ga0157370_10177632 Ga0157370_101776323 434
47 3300026078 Ga0207702_10178246 Ga0207702_101782462 434
48 3300031456 Ga0307513_10225189 Ga0307513_102251892 434
49 3300046463 Ga0495653_0056957 Ga0495653_0056957_674_2116 434
50 3300048908 Ga0496105_0205866 Ga0496105_0205866_115_1527 434
51 3300053084 Ga0495595_0023808 Ga0495595_0023808_1142_2488 434
52 3300048903 Ga0496100_0003662 Ga0496100_0003662_560_1999 435
53 3300048915 Ga0496112_0084147 Ga0496112_0084147_596_2035 435
54 3300048916 Ga0496113_0069932 Ga0496113_0069932_762_2201 435
55 3300005577 Ga0068857_100017123 Ga0068857_1000171235 436
56 3300005614 Ga0068856_100069472 Ga0068856_1000694723 436
57 3300005616 Ga0068852_100038828 Ga0068852_1000388285 436
58 3300026116 Ga0207674_10027766 Ga0207674_100277665 436
59 3300026142 Ga0207698_10012396 Ga0207698_100123965 436
60 3300044658 Ga0466972_0008620 Ga0466972_0008620_528_1889 436
61 3300005329 Ga0070683_100154380 Ga0070683_1001543802 437
62 3300005435 Ga0070714_100216666 Ga0070714_1002166662 437
63 3300025944 Ga0207661_10214550 Ga0207661_102145502 437
64 3300037418 Ga0395900_0024623 Ga0395900_0024623_686_2035 437
65 3300037466 Ga0395898_0063791 Ga0395898_0063791_1626_2975 437
66 3300038443 Ga0395901_0242863 Ga0395901_0242863_324_1673 437
67 3300044683 Ga0466965_0029657 Ga0466965_0029657_1106_2626 437
68 3300048912 Ga0496109_0052404 Ga0496109_0052404_2232_3590 437
69 3300009147 Ga0114129_10263920 Ga0114129_102639202 438
70 3300028800 Ga0265338_10065989 Ga0265338_100659892 438
71 3300046475 Ga0495639_0096546 Ga0495639_0096546_19_1380 438
72 3300048928 Ga0496125_0001000 Ga0496125_0001000_36957_38441 438
73 3300031456 Ga0307513_10000005 Ga0307513_10000005303 439
74 3300031616 Ga0307508_10004618 Ga0307508_1000461813 440
75 3300046461 Ga0495641_0016116 Ga0495641_0016116_1260_2630 441
76 3300006038 Ga0075365_10084120 Ga0075365_100841202 442
77 3300053080 Ga0500635_0000073 Ga0500635_0000073_62191_63570 442
78 iso_pu_bacteria 2870622029 2870625141 442
79 iso_pu_bacteria 2939657138 2939659913 442
80 3300005327 Ga0070658_10003301 Ga0070658_100033012 443
81 3300005543 Ga0070672_100010357 Ga0070672_1000103578 443
82 3300005563 Ga0068855_100000930 Ga0068855_1000009304 443
83 3300009098 Ga0105245_10076988 Ga0105245_100769883 443
84 3300009177 Ga0105248_10018363 Ga0105248_100183636 443
85 3300025941 Ga0207711_10011046 Ga0207711_100110464 443
86 3300025949 Ga0207667_10000837 Ga0207667_1000083712 443
87 3300048913 Ga0496110_0069022 Ga0496110_0069022_731_2143 443
88 3300048925 Ga0496122_0001668 Ga0496122_0001668_18477_19910 443
89 3300048926 Ga0496123_0000363 Ga0496123_0000363_61161_62594 443
90 3300053093 Ga0500651_0006616 Ga0500651_0006616_1988_3436 443
91 iso_pu_bacteria 2731639228 2731906097 443
92 iso_pu_bacteria 2946024296 2946027147 443
93 3300048920 Ga0496117_0000668 Ga0496117_0000668_44499_45938 444
94 3300048925 Ga0496122_0019053 Ga0496122_0019053_2684_4135 444
95 3300048928 Ga0496125_0006019 Ga0496125_0006019_11680_13119 444
96 3300048928 Ga0496125_0009995 Ga0496125_0009995_1810_3261 444
97 3300048929 Ga0496126_0013780 Ga0496126_0013780_4713_6152 444
98 3300048929 Ga0496126_0020506 Ga0496126_0020506_3562_5013 444
99 3300049574 Ga0501038_0046904 Ga0501038_0046904_2192_3613 444
100 3300049584 Ga0501068_0139934 Ga0501068_0139934_42_1421 444
101 iso_pu_bacteria 2585428157 2588107672 444
102 iso_pu_bacteria 2643221553 2643784071 444
103 iso_pu_bacteria 2643221724 2644678776 444
104 iso_pu_bacteria 2728369380 2730228288 444
105 iso_pu_bacteria 2852643534 2852643823 444
106 iso_pu_bacteria 2855683550 2855687018 444
107 iso_pu_bacteria 2857723135 2857726883 444
108 iso_pu_bacteria 2946033335 2946035279 444
109 iso_pu_bacteria 8003856774 8003860371 444
110 iso_pu_bacteria 8055066027 8055071324 445
111 iso_pu_bacteria 8055172936 8055176726 445
112 3300006038 Ga0075365_10000832 Ga0075365_1000083212 446
113 3300025906 Ga0207699_10056221 Ga0207699_100562212 446
114 3300046515 Ga0495620_0031778 Ga0495620_0031778_720_2210 446
115 3300050494 nmdc:mga06z11_13799_c1 nmdc:mga06z11_13799_c1_1385_2875 446
116 3300037068 Ga0373925_0019562 Ga0373925_0019562_957_2387 447
117 3300041411 Ga0439466_0015056 Ga0439466_0015056_893_2278 447
118 3300042007 Ga0439449_0033104 Ga0439449_0033104_155_1540 447
119 iso_pu_bacteria 2517572143 2517894585 447
120 iso_pu_bacteria 8019555841 8019555932 447
121 3300028380 Ga0268265_10103359 Ga0268265_101033592 448
122 3300044656 Ga0466969_0003165 Ga0466969_0003165_4437_5906 448
123 3300045049 Ga0466959_0022021 Ga0466959_0022021_2856_4325 448
124 3300048928 Ga0496125_0000085 Ga0496125_0000085_201925_203415 448
125 iso_pu_bacteria 8056667051 8056672386 448
126 iso_pu_bacteria 2751185734 2753071038 449
127 iso_pu_bacteria 2857733635 2857736984 449
128 iso_pu_bacteria 2870721527 2870726384 450
129 iso_pu_bacteria 2995463766 2995466854 450
130 3300005331 Ga0070670_100005233 Ga0070670_1000052333 451
131 3300025925 Ga0207650_10016923 Ga0207650_100169235 451
132 iso_pu_bacteria 3006425503 3006429232 451
133 3300030522 Ga0307512_10083339 Ga0307512_100833392 452
134 iso_pu_bacteria 2523231044 2523387213 452
135 iso_pu_bacteria 2643221635 2644197735 452
136 3300049589 Ga0501073_0000025 Ga0501073_0000025_105463_106938 453
137 iso_pu_bacteria 2821268502 2821271965 453
138 3300006847 Ga0075431_100000225 Ga0075431_10000022530 454
139 3300049568 Ga0501031_0021872 Ga0501031_0021872_582_2018 454
140 3300049570 Ga0501033_0045455 Ga0501033_0045455_322_1758 454
141 3300049571 Ga0501034_0016111 Ga0501034_0016111_4545_5981 454
142 3300049574 Ga0501038_0012875 Ga0501038_0012875_1665_3101 454
143 3300050491 nmdc:mga00v17_30403_c1 nmdc:mga00v17_30403_c1_1449_2918 454
144 3300050510 nmdc:mga06r32_589_c1 nmdc:mga06r32_589_c1_7993_9411 454
145 3300049581 Ga0501047_0085307 Ga0501047_0085307_448_2001 462
146 3300049823 Ga0501044_0038251 Ga0501044_0038251_2208_3761 462
147 3300060353 Ga0501082_0188205 Ga0501082_0188205_28_1581 463
148 3300003203 JGI25406J46586_10011009 JGI25406J46586_100110091 474
149 3300005985 Ga0081539_10005668 Ga0081539_100056686 474

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00232

Glyco_hydro_1

Glycosyl hydrolase family 1

29

497

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ns6-assembly1.cif.gz_C crystal structure of beta-glucosidase bglm-g1 from marine metagenome 0.9771 5 441
5ns7-assembly1.cif.gz_B crystal structure of beta-glucosidase bglm-g1 mutant h75r from marine metagenome 0.9768 5 441
5ns7-assembly1.cif.gz_A crystal structure of beta-glucosidase bglm-g1 mutant h75r from marine metagenome 0.9766 5 441
5ayi-assembly1.cif.gz_A crystal structure of gh1 beta-glucosidase td2f2 n223q mutant 0.9752 1 442
7wdo-assembly1.cif.gz_A crystal structures of mebgld2 in complex with various saccharides 0.9749 1 446
ID Description Score Start End Superfamily
af_A0A1D6PHF5_27_269_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9767 1 204 3.20.20.80
5ns7A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9766 5 441 3.20.20.80
5aybA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9739 1 442 3.20.20.80
2o9rA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9709 1 443 3.20.20.80
5gnzI00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9695 1 445 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A2L0ARX9-F1-model_v4 Beta-glucosidase 1 23 120 GO:0005829
GO:0008422
GO:0016052
AF-A0A2N5AAG0-F1-model_v4 Aryl-phospho-beta-D-glucosidase 0.9986 1 134 GO:0005829
GO:0008422
GO:0016052
AF-A0A3D5DVX1-F1-model_v4 Beta-glucosidase 0.9984 1 121 GO:0005829
GO:0008422
GO:0030245
AF-X1JSM3-F1-model_v4 Beta-glucosidase 0.9983 1 121 GO:0005975
GO:0008422
AF-A0A352ZDE1-F1-model_v4 deleted 0.9982 14 201

Feature Viewer

pLDDT pTM Quality
92.09 0.91 High
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Predicted Structure (AlphaFold2)

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