F206680

General Info

Members Datasets Scaffolds Average Seq Length
149 106 149 262

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_0377998|Ga0436361_0377998_827_1690
Length 287
Sequence LPTSDSPPSSTSWERNKVPEAITQPIISVRDVVVSYGNRRVLNGINLDIARGETMVLLGGSGSGKSTLLRQIIGLEKPLAGQVLVDGIDLAAADEKTLKRIRKSIGVAFQNAALFNSMSVEDNVALPLREHTRLAESTIGLMTWMKLAVVGLADSAKNSPRELSGGMKKRAAVARALALDPEILVCDEPSAGLDPIVAAELDELILALKRAFSMTVIVVTHELASAFRIADRMAMLYEGTLIAVGRPEELRNSNHPRIRQFFDRVPDQNADTTFAGGYIDRYLNGDY

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
31 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
39 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
40 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
41 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
52 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
53 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
54 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
57 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
58 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
59 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
60 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
61 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
62 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
63 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
64 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
71 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
72 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
73 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
74 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
77 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
78 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
79 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
80 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
81 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
82 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
83 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
84 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
85 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
86 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
87 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
88 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
89 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
90 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
91 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
92 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
93 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
94 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
95 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
96 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
102 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
103 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
104 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
105 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
106 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.99
Metatranscriptomes 2.01
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.37
Rhizosphere 89.93
Stem 0
Stem Tuber 0
Unclassified 4.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10069699 3300005290 Bacteria 6835
2 Ga0065712_10107348 3300005290 Bacteria 1897
3 Ga0070689_100010447 3300005340 Bacteria 6617
4 Ga0070661_100285946 3300005344 Unclassified 1280
5 Ga0070675_100639461 3300005354 Unclassified 966
6 Ga0070671_100066986 3300005355 Unclassified 2993
7 Ga0070659_100024537 3300005366 Bacteria 4622
8 Ga0070667_100198165 3300005367 Unclassified 1781
9 Ga0070713_100029127 3300005436 Bacteria 4369
10 Ga0070708_100008193 3300005445 Bacteria 8385
11 Ga0070706_100005739 3300005467 Bacteria 11800
12 Ga0070706_100030774 3300005467 Bacteria 4947
13 Ga0070706_100059225 3300005467 Bacteria 3534
14 Ga0070707_100002424 3300005468 Bacteria 17773
15 Ga0070707_100115920 3300005468 Unclassified 2600
16 Ga0070698_100000728 3300005471 Bacteria 35348
17 Ga0070698_100022448 3300005471 Bacteria 6602
18 Ga0070698_100065947 3300005471 Unclassified 3645
19 Ga0070698_100526516 3300005471 Bacteria 1120
20 Ga0070699_100003171 3300005518 Bacteria 14560
21 Ga0070699_100089505 3300005518 Unclassified 2689
22 Ga0070699_100302918 3300005518 Bacteria 1434
23 Ga0070697_100003575 3300005536 Bacteria 11944
24 Ga0070697_100007868 3300005536 Bacteria 8305
25 Ga0070697_100285003 3300005536 Bacteria 1418
26 Ga0068855_100035512 3300005563 Bacteria 5938
27 Ga0068856_100202631 3300005614 Bacteria 1999
28 Ga0068851_10091384 3300005834 Bacteria 1603
29 Ga0081455_10023537 3300005937 Bacteria 5729
30 Ga0081539_10010032 3300005985 Bacteria 7792
31 Ga0070717_10001502 3300006028 Bacteria 16141
32 Ga0070717_10004267 3300006028 Bacteria 10304
33 Ga0070717_10068516 3300006028 Bacteria 2954
34 Ga0070717_10118445 3300006028 Bacteria 2266
35 Ga0070717_10175571 3300006028 Bacteria 1865
36 Ga0070717_10183767 3300006028 Unclassified 1824
37 Ga0070717_10343340 3300006028 Bacteria 1334
38 Ga0070715_10112239 3300006163 Unclassified 1287
39 Ga0070716_100115437 3300006173 Bacteria 1671
40 Ga0070716_100387541 3300006173 Bacteria 1001
41 Ga0070712_100037001 3300006175 Bacteria 3324
42 Ga0068871_100009625 3300006358 Bacteria 7017
43 Ga0075428_100353898 3300006844 Bacteria 1576
44 Ga0075433_10002586 3300006852 Bacteria 13792
45 Ga0075433_10028422 3300006852 Bacteria 4753
46 Ga0075434_100006044 3300006871 Bacteria 11071
47 Ga0075434_100058469 3300006871 Bacteria 3832
48 Ga0075434_100083933 3300006871 Bacteria 3184
49 Ga0075436_100048734 3300006914 Unclassified 2923
50 Ga0075436_100052757 3300006914 Bacteria 2807
51 Ga0075436_100216237 3300006914 Unclassified 1359
52 Ga0075435_100097102 3300007076 Bacteria 2438
53 Ga0099794_10080342 3300007265 Bacteria 1608
54 Ga0099794_10148259 3300007265 Bacteria 1190
55 Ga0099795_10012289 3300007788 Bacteria 2592
56 Ga0114129_10098980 3300009147 Bacteria 4036
57 Ga0114129_10323203 3300009147 Unclassified 2051
58 Ga0099796_10000163 3300010159 Bacteria 9937
59 Ga0105239_10032778 3300010375 Bacteria 5708
60 Ga0157372_10051039 3300013307 Bacteria 4602
61 Ga0163163_10493215 3300014325 Unclassified 1286
62 Ga0157376_10108883 3300014969 Bacteria 2435
63 Ga0213872_10001410 3300021361 Bacteria 15810
64 Ga0213876_10029529 3300021384 Bacteria 2889
65 Ga0213875_10000600 3300021388 Bacteria 29159
66 Ga0224712_10017068 3300022467 Unclassified 2400
67 Ga0207656_10064961 3300025321 Bacteria 1610
68 Ga0207684_10007246 3300025910 Bacteria 10020
69 Ga0207684_10025279 3300025910 Bacteria 5061
70 Ga0207684_10034508 3300025910 Unclassified 4298
71 Ga0207693_10018318 3300025915 Bacteria 5579
72 Ga0207693_10078220 3300025915 Unclassified 2589
73 Ga0207663_10131641 3300025916 Bacteria 1729
74 Ga0207663_10325218 3300025916 Bacteria 1157
75 Ga0207646_10001284 3300025922 Bacteria 31388
76 Ga0207646_10021859 3300025922 Bacteria 5903
77 Ga0207706_10055202 3300025933 Bacteria 3504
78 Ga0207670_10030071 3300025936 Bacteria 3468
79 Ga0265338_10187872 3300028800 Unclassified 1569
80 Ga0265338_10298316 3300028800 Bacteria 1172
81 Ga0265762_1003815 3300030760 Bacteria 2697
82 Ga0265765_1007515 3300030879 Unclassified 1174
83 Ga0265325_10084689 3300031241 Bacteria 1571
84 Ga0265331_10066234 3300031250 Bacteria 1697
85 Ga0265316_10003488 3300031344 Bacteria 15870
86 Ga0265314_10032272 3300031711 Bacteria 3854
87 Ga0373923_0183246 3300035111 Bacteria 963
88 Ga0373943_0002111 3300035170 Bacteria 9029
89 Ga0373955_0074676 3300035172 Bacteria 1904
90 Ga0373924_0007948 3300035410 Bacteria 3840
91 Ga0373931_0065159 3300035691 Bacteria 1974
92 Ga0373935_0027321 3300035692 Bacteria 3527
93 Ga0373933_0233043 3300035724 Bacteria 1183
94 Ga0373947_0004318 3300035725 Bacteria 8352
95 Ga0373947_0007836 3300035725 Bacteria 6169
96 Ga0373925_0001707 3300037068 Bacteria 18507
97 Ga0395899_0004953 3300037312 Bacteria 10362
98 Ga0395899_0064742 3300037312 Bacteria 2687
99 Ga0395900_0000286 3300037418 Bacteria 75749
100 Ga0395898_0031747 3300037466 Bacteria 5275
101 Ga0395898_0614243 3300037466 Unclassified 1030
102 Ga0395905_0315241 3300037471 Bacteria 1453
103 Ga0436364_0343924 3300037853 Unclassified 3108
104 Ga0436364_0627950 3300037853 Unclassified 3033
105 Ga0436364_0732019 3300037853 Bacteria 979
106 Ga0436364_0894905 3300037853 Bacteria 62238
107 Ga0436365_1252334 3300039437 Unclassified 4412
108 Ga0436360_0505245 3300039438 Bacteria 1990
109 Ga0436361_0349367 3300039447 Bacteria 55027
110 Ga0436361_0377998 3300039447 Unclassified 1703
111 Ga0436362_0954332 3300039453 Bacteria 1467
112 Ga0453683_0014817 3300044673 Bacteria 5059
113 Ga0453684_0000516 3300044712 Bacteria 147788
114 Ga0495603_0102613 3300046455 Bacteria 1670
115 Ga0495580_0136597 3300046472 Unclassified 1700
116 Ga0495608_0031829 3300046511 Bacteria 3565
117 Ga0495630_0009299 3300046517 Bacteria 7066
118 Ga0495586_0188066 3300046535 Bacteria 1169
119 Ga0495587_0031166 3300046536 Bacteria 3231
120 Ga0495667_0028826 3300046559 Bacteria 3739
121 Ga0495669_0002814 3300046684 Bacteria 7134
122 Ga0495613_0009981 3300046689 Bacteria 7055
123 Ga0495581_0279985 3300047315 Bacteria 975
124 Ga0495604_0093319 3300047317 Bacteria 2227
125 Ga0495674_0043572 3300047319 Bacteria 3995
126 Ga0495680_0104761 3300047322 Bacteria 2104
127 Ga0495684_0004579 3300047471 Bacteria 10804
128 Ga0496100_0093956 3300048903 Unclassified 2053
129 Ga0496102_0618611 3300048905 Bacteria 1006
130 Ga0496106_0133934 3300048909 Bacteria 1945
131 Ga0496107_0055291 3300048910 Bacteria 2867
132 Ga0496108_0126692 3300048911 Bacteria 2192
133 Ga0496109_0008148 3300048912 Bacteria 8888
134 Ga0496112_0036048 3300048915 Unclassified 4822
135 Ga0496112_0528019 3300048915 Bacteria 1115
136 Ga0501034_0000274 3300049571 Bacteria 92942
137 Ga0501038_0275467 3300049574 Bacteria 1326
138 Ga0501047_0016592 3300049581 Bacteria 7031
139 Ga0501070_0055432 3300049586 Bacteria 3285
140 Ga0501080_0239281 3300049742 Bacteria 1657
141 nmdc:mga0rr50_700_c1 3300050513 Bacteria 17975
142 nmdc:mga0rr50_97726_c1 3300050513 Bacteria 2300
143 nmdc:mga08x19_203088_c1 3300050514 Unclassified 1359
144 nmdc:mga08x19_50811_c1 3300050514 Unclassified 2661
145 nmdc:mga0a205_34290_c1 3300050515 Bacteria 4871
146 nmdc:mga0a205_39322_c1 3300050515 Bacteria 4553
147 Ga0495601_0016354 3300053077 Bacteria 4494
148 Ga0495619_0001163 3300053085 Bacteria 17274
149 Ga0495619_0150428 3300053085 Unclassified 1606

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037853 Ga0436364_0732019 Ga0436364_0732019_35_739 217
2 3300039447 Ga0436361_0349367 Ga0436361_0349367_27737_28441 217
3 3300044673 Ga0453683_0014817 Ga0453683_0014817_2767_3648 231
4 3300005467 Ga0070706_100059225 Ga0070706_1000592255 241
5 3300005471 Ga0070698_100000728 Ga0070698_10000072819 241
6 3300021384 Ga0213876_10029529 Ga0213876_100295293 241
7 3300022467 Ga0224712_10017068 Ga0224712_100170682 241
8 3300025910 Ga0207684_10025279 Ga0207684_100252793 241
9 3300037312 Ga0395899_0064742 Ga0395899_0064742_1559_2293 241
10 3300037471 Ga0395905_0315241 Ga0395905_0315241_639_1367 241
11 3300048915 Ga0496112_0528019 Ga0496112_0528019_285_1022 241
12 3300049581 Ga0501047_0016592 Ga0501047_0016592_2918_3652 241
13 3300049586 Ga0501070_0055432 Ga0501070_0055432_1167_1901 241
14 3300005340 Ga0070689_100010447 Ga0070689_1000104477 242
15 3300005445 Ga0070708_100008193 Ga0070708_1000081936 242
16 3300005467 Ga0070706_100030774 Ga0070706_1000307742 242
17 3300005468 Ga0070707_100002424 Ga0070707_1000024245 242
18 3300005471 Ga0070698_100022448 Ga0070698_1000224486 242
19 3300005471 Ga0070698_100526516 Ga0070698_1005265162 242
20 3300005518 Ga0070699_100003171 Ga0070699_10000317111 242
21 3300005536 Ga0070697_100007868 Ga0070697_1000078688 242
22 3300006028 Ga0070717_10183767 Ga0070717_101837672 242
23 3300007788 Ga0099795_10012289 Ga0099795_100122893 242
24 3300021388 Ga0213875_10000600 Ga0213875_1000060018 242
25 3300025910 Ga0207684_10034508 Ga0207684_100345085 242
26 3300025922 Ga0207646_10021859 Ga0207646_100218594 242
27 3300025936 Ga0207670_10030071 Ga0207670_100300713 242
28 3300037853 Ga0436364_0894905 Ga0436364_0894905_35559_36380 242
29 3300048905 Ga0496102_0618611 Ga0496102_0618611_107_844 242
30 3300049571 Ga0501034_0000274 Ga0501034_0000274_54881_55624 242
31 3300049574 Ga0501038_0275467 Ga0501038_0275467_387_1130 242
32 3300046472 Ga0495580_0136597 Ga0495580_0136597_178_960 243
33 3300031711 Ga0265314_10032272 Ga0265314_100322724 245
34 3300049742 Ga0501080_0239281 Ga0501080_0239281_144_944 245
35 3300053085 Ga0495619_0150428 Ga0495619_0150428_504_1304 245
36 3300005290 Ga0065712_10069699 Ga0065712_100696996 246
37 3300005290 Ga0065712_10107348 Ga0065712_101073481 246
38 3300005344 Ga0070661_100285946 Ga0070661_1002859462 246
39 3300005354 Ga0070675_100639461 Ga0070675_1006394611 246
40 3300005355 Ga0070671_100066986 Ga0070671_1000669862 246
41 3300005366 Ga0070659_100024537 Ga0070659_1000245373 246
42 3300005367 Ga0070667_100198165 Ga0070667_1001981652 246
43 3300005436 Ga0070713_100029127 Ga0070713_1000291274 246
44 3300005467 Ga0070706_100005739 Ga0070706_10000573911 246
45 3300005468 Ga0070707_100115920 Ga0070707_1001159202 246
46 3300005471 Ga0070698_100065947 Ga0070698_1000659474 246
47 3300005518 Ga0070699_100089505 Ga0070699_1000895052 246
48 3300005518 Ga0070699_100302918 Ga0070699_1003029182 246
49 3300005536 Ga0070697_100003575 Ga0070697_1000035752 246
50 3300005536 Ga0070697_100285003 Ga0070697_1002850031 246
51 3300005563 Ga0068855_100035512 Ga0068855_1000355124 246
52 3300005614 Ga0068856_100202631 Ga0068856_1002026312 246
53 3300005834 Ga0068851_10091384 Ga0068851_100913842 246
54 3300005937 Ga0081455_10023537 Ga0081455_100235375 246
55 3300005985 Ga0081539_10010032 Ga0081539_100100323 246
56 3300006028 Ga0070717_10001502 Ga0070717_1000150214 246
57 3300006028 Ga0070717_10004267 Ga0070717_100042678 246
58 3300006028 Ga0070717_10068516 Ga0070717_100685165 246
59 3300006028 Ga0070717_10118445 Ga0070717_101184452 246
60 3300006028 Ga0070717_10175571 Ga0070717_101755712 246
61 3300006028 Ga0070717_10343340 Ga0070717_103433402 246
62 3300006163 Ga0070715_10112239 Ga0070715_101122392 246
63 3300006173 Ga0070716_100115437 Ga0070716_1001154372 246
64 3300006173 Ga0070716_100387541 Ga0070716_1003875411 246
65 3300006175 Ga0070712_100037001 Ga0070712_1000370015 246
66 3300006358 Ga0068871_100009625 Ga0068871_1000096256 246
67 3300006844 Ga0075428_100353898 Ga0075428_1003538982 246
68 3300006852 Ga0075433_10002586 Ga0075433_100025864 246
69 3300006852 Ga0075433_10028422 Ga0075433_100284226 246
70 3300006871 Ga0075434_100006044 Ga0075434_1000060448 246
71 3300006871 Ga0075434_100058469 Ga0075434_1000584692 246
72 3300006871 Ga0075434_100083933 Ga0075434_1000839334 246
73 3300006914 Ga0075436_100048734 Ga0075436_1000487342 246
74 3300006914 Ga0075436_100052757 Ga0075436_1000527572 246
75 3300006914 Ga0075436_100216237 Ga0075436_1002162372 246
76 3300007076 Ga0075435_100097102 Ga0075435_1000971023 246
77 3300007265 Ga0099794_10080342 Ga0099794_100803422 246
78 3300007265 Ga0099794_10148259 Ga0099794_101482592 246
79 3300009147 Ga0114129_10098980 Ga0114129_100989802 246
80 3300009147 Ga0114129_10323203 Ga0114129_103232033 246
81 3300010159 Ga0099796_10000163 Ga0099796_100001636 246
82 3300010375 Ga0105239_10032778 Ga0105239_100327786 246
83 3300013307 Ga0157372_10051039 Ga0157372_100510396 246
84 3300014325 Ga0163163_10493215 Ga0163163_104932152 246
85 3300014969 Ga0157376_10108883 Ga0157376_101088833 246
86 3300021361 Ga0213872_10001410 Ga0213872_100014104 246
87 3300025321 Ga0207656_10064961 Ga0207656_100649612 246
88 3300025910 Ga0207684_10007246 Ga0207684_100072463 246
89 3300025915 Ga0207693_10018318 Ga0207693_100183185 246
90 3300025915 Ga0207693_10078220 Ga0207693_100782202 246
91 3300025916 Ga0207663_10131641 Ga0207663_101316412 246
92 3300025916 Ga0207663_10325218 Ga0207663_103252182 246
93 3300025922 Ga0207646_10001284 Ga0207646_1000128422 246
94 3300025933 Ga0207706_10055202 Ga0207706_100552022 246
95 3300028800 Ga0265338_10187872 Ga0265338_101878722 246
96 3300028800 Ga0265338_10298316 Ga0265338_102983162 246
97 3300030760 Ga0265762_1003815 Ga0265762_10038154 246
98 3300030879 Ga0265765_1007515 Ga0265765_10075152 246
99 3300031241 Ga0265325_10084689 Ga0265325_100846892 246
100 3300031250 Ga0265331_10066234 Ga0265331_100662342 246
101 3300031344 Ga0265316_10003488 Ga0265316_1000348811 246
102 3300035111 Ga0373923_0183246 Ga0373923_0183246_24_764 246
103 3300035170 Ga0373943_0002111 Ga0373943_0002111_1196_2005 246
104 3300035172 Ga0373955_0074676 Ga0373955_0074676_692_1501 246
105 3300035410 Ga0373924_0007948 Ga0373924_0007948_1636_2445 246
106 3300035691 Ga0373931_0065159 Ga0373931_0065159_420_1223 246
107 3300035692 Ga0373935_0027321 Ga0373935_0027321_451_1260 246
108 3300035724 Ga0373933_0233043 Ga0373933_0233043_154_960 246
109 3300035725 Ga0373947_0004318 Ga0373947_0004318_7051_7875 246
110 3300035725 Ga0373947_0007836 Ga0373947_0007836_4729_5538 246
111 3300037068 Ga0373925_0001707 Ga0373925_0001707_17318_18127 246
112 3300037312 Ga0395899_0004953 Ga0395899_0004953_1847_2608 246
113 3300037418 Ga0395900_0000286 Ga0395900_0000286_66755_67516 246
114 3300037466 Ga0395898_0031747 Ga0395898_0031747_1595_2356 246
115 3300037466 Ga0395898_0614243 Ga0395898_0614243_119_943 246
116 3300037853 Ga0436364_0343924 Ga0436364_0343924_1903_2718 246
117 3300037853 Ga0436364_0627950 Ga0436364_0627950_859_1671 246
118 3300039437 Ga0436365_1252334 Ga0436365_1252334_1148_1963 246
119 3300039438 Ga0436360_0505245 Ga0436360_0505245_943_1755 246
120 3300039447 Ga0436361_0377998 Ga0436361_0377998_827_1690 246
121 3300039453 Ga0436362_0954332 Ga0436362_0954332_27_839 246
122 3300044712 Ga0453684_0000516 Ga0453684_0000516_89386_90192 246
123 3300046455 Ga0495603_0102613 Ga0495603_0102613_514_1320 246
124 3300046511 Ga0495608_0031829 Ga0495608_0031829_968_1774 246
125 3300046517 Ga0495630_0009299 Ga0495630_0009299_3182_3988 246
126 3300046535 Ga0495586_0188066 Ga0495586_0188066_29_835 246
127 3300046536 Ga0495587_0031166 Ga0495587_0031166_1621_2427 246
128 3300046559 Ga0495667_0028826 Ga0495667_0028826_42_848 246
129 3300046684 Ga0495669_0002814 Ga0495669_0002814_1244_2053 246
130 3300046689 Ga0495613_0009981 Ga0495613_0009981_1780_2586 246
131 3300047315 Ga0495581_0279985 Ga0495581_0279985_130_936 246
132 3300047317 Ga0495604_0093319 Ga0495604_0093319_231_1037 246
133 3300047319 Ga0495674_0043572 Ga0495674_0043572_432_1238 246
134 3300047322 Ga0495680_0104761 Ga0495680_0104761_997_1803 246
135 3300047471 Ga0495684_0004579 Ga0495684_0004579_8374_9180 246
136 3300048903 Ga0496100_0093956 Ga0496100_0093956_1020_1760 246
137 3300048909 Ga0496106_0133934 Ga0496106_0133934_279_1082 246
138 3300048910 Ga0496107_0055291 Ga0496107_0055291_1480_2283 246
139 3300048911 Ga0496108_0126692 Ga0496108_0126692_800_1597 246
140 3300048912 Ga0496109_0008148 Ga0496109_0008148_2721_3461 246
141 3300048915 Ga0496112_0036048 Ga0496112_0036048_782_1579 246
142 3300050513 nmdc:mga0rr50_700_c1 nmdc:mga0rr50_700_c1_12923_13726 246
143 3300050513 nmdc:mga0rr50_97726_c1 nmdc:mga0rr50_97726_c1_1222_2025 246
144 3300050514 nmdc:mga08x19_203088_c1 nmdc:mga08x19_203088_c1_203_1000 246
145 3300050514 nmdc:mga08x19_50811_c1 nmdc:mga08x19_50811_c1_599_1402 246
146 3300050515 nmdc:mga0a205_34290_c1 nmdc:mga0a205_34290_c1_1683_2486 246
147 3300050515 nmdc:mga0a205_39322_c1 nmdc:mga0a205_39322_c1_1044_1847 246
148 3300053077 Ga0495601_0016354 Ga0495601_0016354_767_1573 246
149 3300053085 Ga0495619_0001163 Ga0495619_0001163_6041_6847 246

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

42

191

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ch8-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9732 2 237
7ch8-assembly1.cif.gz_I cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9677 2 237
8fee-assembly1.cif.gz_H structure of mce1 transporter from mycobacterium smegmatis in the absence of lucb (map2) 0.9664 2 241
7cha-assembly1.cif.gz_J cryo-em structure of p.aeruginosa mlafebd with amppnp 0.9664 2 237
4yer-assembly1.cif.gz_A crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9596 2 226
ID Description Score Start End Superfamily
af_P63386_5_251_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9843 2 242 3.40.50.300
af_P9WQL5_26_341_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9766 2 237 3.40.50.300
af_P0A9R7_1_220_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9661 1 217 3.40.50.300
af_P16678_3_252_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.964 2 239 3.40.50.300
af_P14175_33_289_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9622 17 239 3.40.50.300
ID Description Score Start End GO Terms
AF-S0EXW4-F1-model_v4 ABC-type transport system involved in resistance to organic solvents, ATPase component 0.9886 2 237 GO:0005524
GO:0016887
AF-A0A3C0VK17-F1-model_v4 ABC transporter ATP-binding protein 0.9776 2 244 GO:0005524
GO:0016887
AF-A0A3M1FIL7-F1-model_v4 ATP-binding cassette domain-containing protein 0.9773 33 241 GO:0005524
GO:0016887
AF-I6YVC5-F1-model_v4 ABC transporter-like protein 0.9715 1 240 GO:0005524
GO:0016887
AF-A0A354XJ33-F1-model_v4 ABC transporter ATP-binding protein 0.9668 21 200 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
91.31 0.87 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map