F206606

General Info

Members Datasets Scaffolds Average Seq Length
149 33 298 262

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0019624|Ga0316582_0019624_2483_3373
Length 296
Sequence MQNGIGFVQDEQDLRDGFFILPALLFRRIFFGNELGAMNKGVFVGVDVGASRTKVAVLDKEKKLLGFCVRKSGTDFQKTAEDCLDESLKMAETSRAAVIQCFSTGYGRKNVAFRHDTKTEIGCHGRGAYHYFPMAITVIDIGGQDNKIIKLDDHGRRMNFKMNRKCAAGTGAFLEEMSLRLDIPLEEMDALARTSEHIVELGSYCTVFSGTEVLEKIRQGEKVSDIVKGLFYSVIKRVMEMDSFSERIVMTGGVVEHNPYIVEMLGRITGKDVLTPAHPQLTGAVGAALFAMEAGE

Samples

Sample ID Description Type Environment
1 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
2 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
3 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
4 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
5 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
6 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
7 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
8 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
9 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
10 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
11 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
12 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
13 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
14 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
15 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
16 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
17 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
18 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
19 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
20 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
21 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
22 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
23 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
24 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
25 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
26 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
27 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
28 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
29 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
30 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
31 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
32 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
33 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.33
Metatranscriptomes 0.67
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 87.25
Stem 0
Stem Tuber 0
Unclassified 10.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316582_0019624 3300036647 Bacteria 3962
2 Ga0265330_10023926 3300031235 Bacteria 2771
3 Ga0265316_10017692 3300031344 Bacteria 6148
4 Ga0265316_10026996 3300031344 Bacteria 4765
5 Ga0265316_10049181 3300031344 Unclassified 3322
6 Ga0316575_10000068 3300031665 Bacteria 25393
7 Ga0316575_10001027 3300031665 Bacteria 8646
8 Ga0316575_10022526 3300031665 Unclassified 2431
9 Ga0316575_10111026 3300031665 Bacteria 1118
10 Ga0316579_10002356 3300031691 Bacteria 7137
11 Ga0316579_10003732 3300031691 Bacteria 5994
12 Ga0316579_10006531 3300031691 Bacteria 4762
13 Ga0316579_10017773 3300031691 Unclassified 3123
14 Ga0316579_10130209 3300031691 Bacteria 1212
15 Ga0316579_10181635 3300031691 Bacteria 1017
16 Ga0265342_10168184 3300031712 Unclassified 1208
17 Ga0265342_10199042 3300031712 Bacteria 1089
18 Ga0316576_10000576 3300031727 Bacteria 17425
19 Ga0316576_10005960 3300031727 Bacteria 7528
20 Ga0316576_10010644 3300031727 Bacteria 5990
21 Ga0316576_10019774 3300031727 Bacteria 4619
22 Ga0316576_10040340 3300031727 Bacteria 3355
23 Ga0316576_10053509 3300031727 Unclassified 2942
24 Ga0316576_10060205 3300031727 Bacteria 2781
25 Ga0316576_10079053 3300031727 Bacteria 2437
26 Ga0316576_10090241 3300031727 Bacteria 2282
27 Ga0316576_10102485 3300031727 Bacteria 2140
28 Ga0316576_10180843 3300031727 Bacteria 1590
29 Ga0316576_10181712 3300031727 Bacteria 1586
30 Ga0316576_10222223 3300031727 Unclassified 1421
31 Ga0316576_10327523 3300031727 Unclassified 1142
32 Ga0316576_10346452 3300031727 Unclassified 1106
33 Ga0316576_10450812 3300031727 Bacteria 950
34 Ga0316576_10476718 3300031727 Unclassified 920
35 Ga0316578_10000331 3300031728 Bacteria 14800
36 Ga0316578_10003370 3300031728 Bacteria 7288
37 Ga0316578_10012786 3300031728 Bacteria 4432
38 Ga0316578_10029051 3300031728 Bacteria 3135
39 Ga0316578_10102907 3300031728 Bacteria 1712
40 Ga0316578_10103282 3300031728 Bacteria 1709
41 Ga0316578_10149296 3300031728 Bacteria 1408
42 Ga0316577_10001092 3300031733 Bacteria 12298
43 Ga0316577_10012938 3300031733 Bacteria 4553
44 Ga0316577_10016971 3300031733 Bacteria 4018
45 Ga0316577_10022321 3300031733 Bacteria 3514
46 Ga0316577_10043485 3300031733 Bacteria 2513
47 Ga0316577_10048971 3300031733 Unclassified 2359
48 Ga0316577_10076326 3300031733 Bacteria 1871
49 Ga0316577_10111703 3300031733 Bacteria 1533
50 Ga0316577_10130532 3300031733 Bacteria 1414
51 Ga0316577_10206937 3300031733 Viruses 1109
52 Ga0316583_10001011 3300032133 Bacteria 9073
53 Ga0316583_10003235 3300032133 Bacteria 5728
54 Ga0316583_10009789 3300032133 Bacteria 3455
55 Ga0316585_10010949 3300032137 Bacteria 2668
56 Ga0316585_10017019 3300032137 Bacteria 2195
57 Ga0316585_10061633 3300032137 Bacteria 1212
58 Ga0316580_10013225 3300032139 Bacteria 2514
59 Ga0316580_10015773 3300032139 Bacteria 2312
60 Ga0316580_10048609 3300032139 Bacteria 1307
61 Ga0316593_10040504 3300032168 Bacteria 1548
62 Ga0373926_0067348 3300035083 Bacteria 1312
63 Ga0316574_0000848 3300035398 Bacteria 13408
64 Ga0316574_0002623 3300035398 Bacteria 9070
65 Ga0316574_0006858 3300035398 Bacteria 6194
66 Ga0316574_0007346 3300035398 Bacteria 6036
67 Ga0316574_0177756 3300035398 Bacteria 1369
68 Ga0316574_0375453 3300035398 Bacteria 897
69 Ga0316582_0005210 3300036647 Bacteria 6662
70 Ga0316582_0010074 3300036647 Bacteria 5162
71 Ga0316582_0031801 3300036647 Bacteria 3229
72 Ga0316582_0047199 3300036647 Bacteria 2718
73 Ga0316582_0059322 3300036647 Bacteria 2450
74 Ga0316582_0097833 3300036647 Bacteria 1940
75 Ga0316582_0124381 3300036647 Bacteria 1728
76 Ga0316582_0129289 3300036647 Bacteria 1695
77 Ga0316582_0153125 3300036647 Bacteria 1559
78 Ga0316582_0154836 3300036647 Unclassified 1551
79 Ga0316582_0244515 3300036647 Bacteria 1229
80 Ga0316582_0267428 3300036647 Bacteria 1173
81 Ga0316582_0297351 3300036647 Bacteria 1109
82 Ga0316582_0340022 3300036647 Bacteria 1032
83 Ga0316584_0001297 3300036712 Bacteria 14757
84 Ga0316584_0003225 3300036712 Bacteria 10556
85 Ga0316584_0006633 3300036712 Bacteria 7847
86 Ga0316584_0007880 3300036712 Bacteria 7308
87 Ga0316584_0043227 3300036712 Bacteria 3359
88 Ga0316584_0051235 3300036712 Bacteria 3087
89 Ga0316584_0204676 3300036712 Bacteria 1455
90 Ga0316584_0555220 3300036712 Bacteria 801
91 Ga0373925_0130070 3300037068 Bacteria 1962
92 Ga0316581_0017709 3300037588 Bacteria 2060
93 Ga0316581_0070555 3300037588 Unclassified 1073
94 Ga0400484_32218 3300038725 Bacteria 1828
95 Ga0400484_33938 3300038725 Bacteria 2051
96 Ga0400490_03302 3300038726 Bacteria 1175
97 Ga0400490_11833 3300038726 Bacteria 3482
98 Ga0400490_32671 3300038726 Bacteria 24595
99 Ga0400488_04385 3300038741 Bacteria 2789
100 Ga0400488_11890 3300038741 Bacteria 8796
101 Ga0400488_38145 3300038741 Archaea 1182
102 Ga0400488_48726 3300038741 Bacteria 19761
103 Ga0400483_030808 3300039062 Unclassified 1050
104 Ga0400483_070260 3300039062 Bacteria 7194
105 Ga0400483_094457 3300039062 Bacteria 2931
106 Ga0400483_164775 3300039062 Bacteria 4236
107 Ga0400489_47896 3300039093 Bacteria 141848
108 Ga0400489_62788 3300039093 Bacteria 2915
109 Ga0400489_73420 3300039093 Bacteria 27038
110 Ga0400489_75970 3300039093 Bacteria 60900
111 Ga0400489_91205 3300039093 Bacteria 9441
112 Ga0400487_58083 3300039110 Unclassified 1849
113 Ga0451577_0000944 3300042876 Bacteria 42644
114 Ga0451577_0001341 3300042876 Bacteria 33397
115 Ga0451577_0005519 3300042876 Bacteria 12914
116 Ga0451577_0009595 3300042876 Bacteria 9295
117 Ga0451577_0099354 3300042876 Bacteria 2599
118 Ga0451577_0132982 3300042876 Bacteria 2232
119 Ga0451577_0188431 3300042876 Bacteria 1860
120 Ga0453683_0000239 3300044673 Bacteria 73028
121 Ga0453683_0000694 3300044673 Bacteria 35233
122 Ga0453683_0006569 3300044673 Bacteria 7968
123 Ga0453683_0021902 3300044673 Bacteria 4077
124 Ga0453684_0000285 3300044712 Bacteria 218061
125 Ga0453684_0000715 3300044712 Bacteria 117347
126 Ga0453684_0001223 3300044712 Bacteria 78796
127 Ga0453684_0002073 3300044712 Bacteria 50911
128 Ga0453684_0003321 3300044712 Bacteria 36577
129 Ga0453684_0006185 3300044712 Bacteria 22966
130 Ga0453684_0019305 3300044712 Bacteria 10390
131 Ga0453684_0025185 3300044712 Bacteria 8648
132 Ga0453684_0064158 3300044712 Bacteria 4693
133 Ga0453684_0070389 3300044712 Unclassified 4430
134 Ga0453684_0077824 3300044712 Bacteria 4153
135 Ga0453684_0112607 3300044712 Bacteria 3302
136 Ga0453684_0206696 3300044712 Bacteria 2285
137 Ga0453684_0330305 3300044712 Bacteria 1724
138 Ga0453684_0337118 3300044712 Bacteria 1704
139 Ga0453684_0405273 3300044712 Bacteria 1526
140 Ga0451576_0009230 3300045051 Bacteria 11462
141 Ga0451576_0033564 3300045051 Bacteria 5455
142 Ga0451576_0118712 3300045051 Bacteria 2753
143 Ga0451576_0173271 3300045051 Bacteria 2252
144 Ga0451576_0494535 3300045051 Unclassified 1285
145 Ga0495629_0253265 3300046459 Bacteria 1211
146 Ga0495582_0112574 3300046473 Bacteria 1529
147 Ga0495630_0019833 3300046517 Bacteria 4948
148 Ga0495586_0004966 3300046535 Bacteria 7114
149 Ga0495581_0036757 3300047315 Bacteria 2833
150 Ga0316582_0019624
151 Ga0265330_10023926
152 Ga0265316_10017692
153 Ga0265316_10026996
154 Ga0265316_10049181
155 Ga0316575_10000068
156 Ga0316575_10001027
157 Ga0316575_10022526
158 Ga0316575_10111026
159 Ga0316579_10002356
160 Ga0316579_10003732
161 Ga0316579_10006531
162 Ga0316579_10017773
163 Ga0316579_10130209
164 Ga0316579_10181635
165 Ga0265342_10168184
166 Ga0265342_10199042
167 Ga0316576_10000576
168 Ga0316576_10005960
169 Ga0316576_10010644
170 Ga0316576_10019774
171 Ga0316576_10040340
172 Ga0316576_10053509
173 Ga0316576_10060205
174 Ga0316576_10079053
175 Ga0316576_10090241
176 Ga0316576_10102485
177 Ga0316576_10180843
178 Ga0316576_10181712
179 Ga0316576_10222223
180 Ga0316576_10327523
181 Ga0316576_10346452
182 Ga0316576_10450812
183 Ga0316576_10476718
184 Ga0316578_10000331
185 Ga0316578_10003370
186 Ga0316578_10012786
187 Ga0316578_10029051
188 Ga0316578_10102907
189 Ga0316578_10103282
190 Ga0316578_10149296
191 Ga0316577_10001092
192 Ga0316577_10012938
193 Ga0316577_10016971
194 Ga0316577_10022321
195 Ga0316577_10043485
196 Ga0316577_10048971
197 Ga0316577_10076326
198 Ga0316577_10111703
199 Ga0316577_10130532
200 Ga0316577_10206937
201 Ga0316583_10001011
202 Ga0316583_10003235
203 Ga0316583_10009789
204 Ga0316585_10010949
205 Ga0316585_10017019
206 Ga0316585_10061633
207 Ga0316580_10013225
208 Ga0316580_10015773
209 Ga0316580_10048609
210 Ga0316593_10040504
211 Ga0373926_0067348
212 Ga0316574_0000848
213 Ga0316574_0002623
214 Ga0316574_0006858
215 Ga0316574_0007346
216 Ga0316574_0177756
217 Ga0316574_0375453
218 Ga0316582_0005210
219 Ga0316582_0010074
220 Ga0316582_0031801
221 Ga0316582_0047199
222 Ga0316582_0059322
223 Ga0316582_0097833
224 Ga0316582_0124381
225 Ga0316582_0129289
226 Ga0316582_0153125
227 Ga0316582_0154836
228 Ga0316582_0244515
229 Ga0316582_0267428
230 Ga0316582_0297351
231 Ga0316582_0340022
232 Ga0316584_0001297
233 Ga0316584_0003225
234 Ga0316584_0006633
235 Ga0316584_0007880
236 Ga0316584_0043227
237 Ga0316584_0051235
238 Ga0316584_0204676
239 Ga0316584_0555220
240 Ga0373925_0130070
241 Ga0316581_0017709
242 Ga0316581_0070555
243 Ga0400484_32218
244 Ga0400484_33938
245 Ga0400490_03302
246 Ga0400490_11833
247 Ga0400490_32671
248 Ga0400488_04385
249 Ga0400488_11890
250 Ga0400488_38145
251 Ga0400488_48726
252 Ga0400483_030808
253 Ga0400483_070260
254 Ga0400483_094457
255 Ga0400483_164775
256 Ga0400489_47896
257 Ga0400489_62788
258 Ga0400489_73420
259 Ga0400489_75970
260 Ga0400489_91205
261 Ga0400487_58083
262 Ga0451577_0000944
263 Ga0451577_0001341
264 Ga0451577_0005519
265 Ga0451577_0009595
266 Ga0451577_0099354
267 Ga0451577_0132982
268 Ga0451577_0188431
269 Ga0453683_0000239
270 Ga0453683_0000694
271 Ga0453683_0006569
272 Ga0453683_0021902
273 Ga0453684_0000285
274 Ga0453684_0000715
275 Ga0453684_0001223
276 Ga0453684_0002073
277 Ga0453684_0003321
278 Ga0453684_0006185
279 Ga0453684_0019305
280 Ga0453684_0025185
281 Ga0453684_0064158
282 Ga0453684_0070389
283 Ga0453684_0077824
284 Ga0453684_0112607
285 Ga0453684_0206696
286 Ga0453684_0330305
287 Ga0453684_0337118
288 Ga0453684_0405273
289 Ga0451576_0009230
290 Ga0451576_0033564
291 Ga0451576_0118712
292 Ga0451576_0173271
293 Ga0451576_0494535
294 Ga0495629_0253265
295 Ga0495582_0112574
296 Ga0495630_0019833
297 Ga0495586_0004966
298 Ga0495581_0036757

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01869

BcrAD_BadFG

BadF/BadG/BcrA/BcrD ATPase family

44

291

0.92

PF02782

FGGY_C

FGGY family of carbohydrate kinases, C-terminal domain

208

295

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1hux-assembly1.cif.gz_B crystal structure of the acidaminococcus fermentans (r)-2-hydroxyglutaryl-coa dehydratase component a 0.9355 1 252
6ea8-assembly2.cif.gz_B structure of vacv poxin in pre-reactive state with nonhydrolyzable 2'3' cgamp 0.9255 97 123
1hux-assembly1.cif.gz_B crystal structure of the acidaminococcus fermentans (r)-2-hydroxyglutaryl-coa dehydratase component a 0.9249 1 252
6ea8-assembly5.cif.gz_I-4 structure of vacv poxin in pre-reactive state with nonhydrolyzable 2'3' cgamp 0.9178 97 123
4ehu-assembly1.cif.gz_A activator of the 2-hydroxyisocaproyl-coa dehydratase from clostridium difficile with bound adpnp 0.9156 3 252
ID Description Score Start End Superfamily
af_A0A1D6DWZ1_6_279_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9376 3 32 3.30.420.40
af_P39383_3_86_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9136 4 88 3.30.420.40
1huxB01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9072 1 91 3.30.420.40
1huxB02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9018 95 232 3.30.420.40
af_P39383_79_255_3.30.870.30 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;MITD, C-terminal phospholipase D-like domain 0.9002 81 253 3.30.870.30
ID Description Score Start End GO Terms
AF-A0A2M7PHK4-F1-model_v4 ATPase 0.9852 2 251 GO:0051536
AF-A0A3M1CJH8-F1-model_v4 ATPase 0.9817 2 222 GO:0046872
GO:0051536
AF-A0A0F9K167-F1-model_v4 ATPase BadF/BadG/BcrA/BcrD type domain-containing protein 0.9789 2 242 GO:0046872
GO:0051536
AF-A0A151EP75-F1-model_v4 ATPase 0.9787 2 253 GO:0046872
GO:0051536
AF-A0A7C1QWH3-F1-model_v4 ATPase 0.9773 3 219 GO:0046872
GO:0051536

Map