F204571

General Info

Members Datasets Scaffolds Average Seq Length
148 118 296 291

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2808606522|2809592310
Length 332
Sequence GPLGDFLQARRARLRPEDVGLRDLGPRRRVAGLRREELAQLAGVSVSYYARLEQGMSRGASAEVLDAIARALLLDGHEREHLDRLADAARRAPRARRPRPEKLHDETRDLLRTVAAPALVLGRRSDVLAWNDLGHALLAGHLGFHAPEDPARRPNMSRMLFLDPHSRELYVDWKRKIRAVVGNLRIAVGRHPDDPLLAELIGELTMKSTEFVALWGDHRVQPCDAAAYELHHPVVGPVTVTQQTLAIARSPDQLLIVCTTPAGSPGEQGLKLLGQARSGLVVDRDHVTVRVREGERTAERPVERLRDDGSARRGQPVVQQLRVIGVKPQRHS

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
4 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
5 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
6 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
7 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
8 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
9 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
10 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
11 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
12 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
13 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
14 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
15 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
22 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
23 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
24 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
25 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
26 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
27 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
28 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
29 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
30 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
31 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
32 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
33 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
34 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
35 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
36 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
37 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
38 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
39 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
40 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
41 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
42 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
43 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
44 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
45 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
46 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
47 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
48 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
49 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
50 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
51 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
52 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
53 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
54 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
55 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
56 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
57 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
58 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
59 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
60 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
61 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
71 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
73 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
74 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
75 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
76 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
77 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
78 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
79 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
80 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
81 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
82 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
83 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
84 2643221647 Streptomyces sp. Root369 Isolate Unclassified
85 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
86 2643221714 Streptomyces sp. Root264 Isolate Unclassified
87 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
88 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
89 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
90 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
91 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
92 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
93 2808606394 Promicromonospora sp. C35 Isolate Unclassified
94 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
95 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
96 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
97 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
98 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
99 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
100 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
101 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
102 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
103 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
104 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
105 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
106 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
107 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
108 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
109 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
110 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
111 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
112 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
113 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
114 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
115 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
116 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere
117 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
118 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.62
Metatranscriptomes 0
Isolates 28.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.76
Nodule 0
Rhizoplane 0.68
Rhizosphere 55.41
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10033804 3300003316 Bacteria 5826
2 rootH2_10013771 3300003320 Bacteria 4247
3 rootH2_10061083 3300003320 Bacteria 4706
4 rootH2_10187121 3300003320 Bacteria 1487
5 Ga0070671_100000562 3300005355 Bacteria 26302
6 Ga0068853_100028461 3300005539 Bacteria 4700
7 Ga0068853_100049788 3300005539 Bacteria 3602
8 Ga0070665_100005722 3300005548 Bacteria 12762
9 Ga0070665_100108295 3300005548 Bacteria 2781
10 Ga0068863_100041474 3300005841 Bacteria 4377
11 Ga0068860_100187390 3300005843 Bacteria 2001
12 Ga0081538_10003516 3300005981 Bacteria 14755
13 Ga0075362_10001551 3300006177 Bacteria 7414
14 Ga0105237_10010731 3300009545 Bacteria 9718
15 Ga0105237_10013356 3300009545 Bacteria 8614
16 Ga0105237_10550634 3300009545 Bacteria 1160
17 Ga0105238_10297367 3300009551 Bacteria 1598
18 Ga0105239_10024765 3300010375 Bacteria 6611
19 Ga0209758_1003197 3300025297 Bacteria 15291
20 Ga0209051_1005112 3300025303 Bacteria 7791
21 Ga0207660_10170823 3300025917 Bacteria 1683
22 Ga0207664_10183115 3300025929 Bacteria 1799
23 Ga0207644_10003188 3300025931 Bacteria 10564
24 Ga0207639_10117288 3300026041 Bacteria 2181
25 Ga0268266_10028806 3300028379 Bacteria 4720
26 Ga0268266_10152211 3300028379 Bacteria 2086
27 Ga0268264_10163422 3300028381 Bacteria 2008
28 Ga0307517_10040446 3300028786 Bacteria 5075
29 Ga0307515_10052962 3300028794 Bacteria 6002
30 Ga0307515_10109998 3300028794 Bacteria 3230
31 Ga0307512_10024503 3300030522 Bacteria 5367
32 Ga0265327_10008810 3300031251 Bacteria 7439
33 Ga0307513_10270464 3300031456 Bacteria 1483
34 Ga0307508_10000825 3300031616 Bacteria 36083
35 Ga0307508_10041115 3300031616 Bacteria 4150
36 Ga0307405_10059482 3300031731 Bacteria 2408
37 Ga0307413_10000216 3300031824 Bacteria 16779
38 Ga0307413_10286052 3300031824 Bacteria 1242
39 Ga0307518_10001398 3300031838 Bacteria 17950
40 Ga0307410_10010252 3300031852 Bacteria 5296
41 Ga0307406_10011849 3300031901 Bacteria 4955
42 Ga0307407_10216044 3300031903 Bacteria 1293
43 Ga0307412_10003143 3300031911 Bacteria 9174
44 Ga0307409_100013746 3300031995 Bacteria 5228
45 Ga0307409_100394669 3300031995 Bacteria 1319
46 Ga0307414_10008718 3300032004 Bacteria 5777
47 Ga0307411_10010914 3300032005 Bacteria 4871
48 Ga0307411_10083788 3300032005 Bacteria 2203
49 Ga0307415_100007230 3300032126 Bacteria 6061
50 Ga0307507_10004866 3300033179 Bacteria 23029
51 Ga0373951_0000032 3300035091 Bacteria 54432
52 Ga0373925_0000648 3300037068 Bacteria 32733
53 Ga0439461_0008395 3300041410 Bacteria 1849
54 Ga0439466_0002797 3300041411 Bacteria 6835
55 Ga0439466_0030905 3300041411 Bacteria 1834
56 Ga0439465_0000216 3300041413 Bacteria 15461
57 Ga0439465_0004039 3300041413 Bacteria 4785
58 Ga0451837_0365031 3300041494 Bacteria 1541
59 Ga0439431_0011234 3300041997 Bacteria 2044
60 Ga0439431_0015611 3300041997 Bacteria 1769
61 Ga0439442_016972 3300042002 Bacteria 1502
62 Ga0466972_0030616 3300044658 Bacteria 2648
63 Ga0466963_0000659 3300044694 Bacteria 16642
64 Ga0466970_0042066 3300044765 Bacteria 2429
65 Ga0466967_0254263 3300045976 Bacteria 1679
66 Ga0495638_0269863 3300046460 Bacteria 929
67 Ga0495606_0126275 3300046507 Bacteria 1525
68 Ga0496108_0000029 3300048911 Bacteria 167261
69 Ga0496117_0012740 3300048920 Bacteria 7382
70 Ga0496117_0021547 3300048920 Bacteria 5208
71 Ga0496118_0083979 3300048921 Bacteria 2224
72 Ga0496119_0004012 3300048922 Bacteria 14886
73 Ga0496120_0043888 3300048923 Bacteria 2602
74 Ga0496122_0000095 3300048925 Bacteria 200509
75 Ga0496122_0002411 3300048925 Bacteria 26622
76 Ga0496122_0065673 3300048925 Bacteria 2629
77 Ga0496122_0072454 3300048925 Bacteria 2449
78 Ga0496123_0000100 3300048926 Bacteria 170019
79 Ga0496123_0000363 3300048926 Bacteria 85560
80 Ga0496123_0007185 3300048926 Bacteria 10566
81 Ga0496123_0015132 3300048926 Bacteria 6349
82 Ga0496125_0024354 3300048928 Bacteria 5568
83 Ga0501033_0090864 3300049570 Bacteria 2233
84 Ga0501033_0131766 3300049570 Bacteria 1811
85 Ga0501034_0011326 3300049571 Bacteria 9252
86 Ga0501036_0054735 3300049572 Bacteria 3380
87 Ga0501037_0108107 3300049573 Bacteria 2004
88 Ga0501038_0021640 3300049574 Bacteria 5770
89 Ga0501039_0292442 3300049575 Bacteria 1281
90 Ga0501042_0287099 3300049578 Bacteria 1188
91 Ga0501043_0035276 3300049579 Bacteria 3934
92 Ga0501043_0307650 3300049579 Bacteria 1210
93 Ga0501047_0000064 3300049581 Bacteria 136110
94 Ga0501047_0173432 3300049581 Bacteria 2025
95 Ga0501083_0019233 3300049744 Bacteria 4757
96 Ga0501035_0094426 3300049822 Bacteria 2630
97 Ga0501035_0213209 3300049822 Bacteria 1651
98 Ga0501044_0194321 3300049823 Bacteria 1990
99 Ga0501044_0227625 3300049823 Bacteria 1813
100 nmdc:mga03683_6439_c1 3300050489 Bacteria 4020
101 Ga0500643_000784 3300053087 Bacteria 20601
102 Ga0500641_0013840 3300053096 Bacteria 2968
103 Ga0500594_0002821 3300053118 Bacteria 3788
104 Ga0500577_0001173 3300053142 Bacteria 6698
105 Ga0500616_0000095 3300053153 Bacteria 180630
106 Ga0500616_0004840 3300053153 Bacteria 9401
107 2809592310 2808606522 Bacteria 9488490
108 2552113177 2551306166 Bacteria 9731570
109 2558906343 2558860112 Bacteria 9931328
110 2586058932 2585427649 Bacteria 9053857
111 2616901239 2616644941 Bacteria 8510691
112 2644267436 2643221647 Bacteria 10741251
113 2644486921 2643221687 Bacteria 6500351
114 2644630748 2643221714 Bacteria 9015452
115 2644639501 2643221715 Bacteria 6671032
116 2738669083 2738541264 Bacteria 5935393
117 2739147620 2738541356 Bacteria 5935017
118 2739608169 2739367654 Bacteria 6049412
119 2753077050 2751185734 Bacteria 8863695
120 2760623843 2758568621 Bacteria 5967089
121 2809027059 2808606394 Bacteria 6248540
122 2816507364 2816332139 Bacteria 9138787
123 2831938550 2831935698 Bacteria 5963223
124 2858908365 2858902515 Bacteria 7086037
125 2862185558 2862178590 Bacteria 8583590
126 2862297109 2862290372 Bacteria 7471434
127 2866556283 2866552031 Bacteria 5824618
128 2867512397 2867507094 Bacteria 6506033
129 2867512890 2867507094 Bacteria 6506033
130 2870721681 2870721527 Bacteria 9689237
131 2870784697 2870782633 Bacteria 9624083
132 2899368418 2899359706 Bacteria 10940472
133 2902793127 2902792274 Bacteria 7270173
134 2902803683 2902799365 Bacteria 5419524
135 2902812209 2902810491 Bacteria 6794147
136 2902841809 2902837492 Bacteria 6697721
137 2917742579 2917736166 Bacteria 9690793
138 2945923442 2945920336 Bacteria 4501603
139 2946040844 2946037020 Bacteria 4900426
140 2954002087 2953998280 Bacteria 4812144
141 3006328584 3006321560 Bacteria 8247479
142 8025536838 8025530807 Bacteria 8495698
143 8033690513 8033684223 Bacteria 6906479
144 8053953614 8053945823 Bacteria 8962862
145 8056059160 8056054917 Bacteria 5736694
146 8056210551 8056207758 Bacteria 8639239
147 8057346945 8057345674 Bacteria 4160394
148 8057347677 8057345674 Bacteria 4160394
149 rootH1_10033804
150 rootH2_10013771
151 rootH2_10061083
152 rootH2_10187121
153 Ga0070671_100000562
154 Ga0068853_100028461
155 Ga0068853_100049788
156 Ga0070665_100005722
157 Ga0070665_100108295
158 Ga0068863_100041474
159 Ga0068860_100187390
160 Ga0081538_10003516
161 Ga0075362_10001551
162 Ga0105237_10010731
163 Ga0105237_10013356
164 Ga0105237_10550634
165 Ga0105238_10297367
166 Ga0105239_10024765
167 Ga0209758_1003197
168 Ga0209051_1005112
169 Ga0207660_10170823
170 Ga0207664_10183115
171 Ga0207644_10003188
172 Ga0207639_10117288
173 Ga0268266_10028806
174 Ga0268266_10152211
175 Ga0268264_10163422
176 Ga0307517_10040446
177 Ga0307515_10052962
178 Ga0307515_10109998
179 Ga0307512_10024503
180 Ga0265327_10008810
181 Ga0307513_10270464
182 Ga0307508_10000825
183 Ga0307508_10041115
184 Ga0307405_10059482
185 Ga0307413_10000216
186 Ga0307413_10286052
187 Ga0307518_10001398
188 Ga0307410_10010252
189 Ga0307406_10011849
190 Ga0307407_10216044
191 Ga0307412_10003143
192 Ga0307409_100013746
193 Ga0307409_100394669
194 Ga0307414_10008718
195 Ga0307411_10010914
196 Ga0307411_10083788
197 Ga0307415_100007230
198 Ga0307507_10004866
199 Ga0373951_0000032
200 Ga0373925_0000648
201 Ga0439461_0008395
202 Ga0439466_0002797
203 Ga0439466_0030905
204 Ga0439465_0000216
205 Ga0439465_0004039
206 Ga0451837_0365031
207 Ga0439431_0011234
208 Ga0439431_0015611
209 Ga0439442_016972
210 Ga0466972_0030616
211 Ga0466963_0000659
212 Ga0466970_0042066
213 Ga0466967_0254263
214 Ga0495638_0269863
215 Ga0495606_0126275
216 Ga0496108_0000029
217 Ga0496117_0012740
218 Ga0496117_0021547
219 Ga0496118_0083979
220 Ga0496119_0004012
221 Ga0496120_0043888
222 Ga0496122_0000095
223 Ga0496122_0002411
224 Ga0496122_0065673
225 Ga0496122_0072454
226 Ga0496123_0000100
227 Ga0496123_0000363
228 Ga0496123_0007185
229 Ga0496123_0015132
230 Ga0496125_0024354
231 Ga0501033_0090864
232 Ga0501033_0131766
233 Ga0501034_0011326
234 Ga0501036_0054735
235 Ga0501037_0108107
236 Ga0501038_0021640
237 Ga0501039_0292442
238 Ga0501042_0287099
239 Ga0501043_0035276
240 Ga0501043_0307650
241 Ga0501047_0000064
242 Ga0501047_0173432
243 Ga0501083_0019233
244 Ga0501035_0094426
245 Ga0501035_0213209
246 Ga0501044_0194321
247 Ga0501044_0227625
248 nmdc:mga03683_6439_c1
249 Ga0500643_000784
250 Ga0500641_0013840
251 Ga0500594_0002821
252 Ga0500577_0001173
253 Ga0500616_0000095
254 Ga0500616_0004840
255 2809592310
256 2552113177
257 2558906343
258 2586058932
259 2616901239
260 2644267436
261 2644486921
262 2644630748
263 2644639501
264 2738669083
265 2739147620
266 2739608169
267 2753077050
268 2760623843
269 2809027059
270 2816507364
271 2831938550
272 2858908365
273 2862185558
274 2862297109
275 2866556283
276 2867512397
277 2867512890
278 2870721681
279 2870784697
280 2899368418
281 2902793127
282 2902803683
283 2902812209
284 2902841809
285 2917742579
286 2945923442
287 2946040844
288 2954002087
289 3006328584
290 8025536838
291 8033690513
292 8053953614
293 8056059160
294 8056210551
295 8057346945
296 8057347677

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01381

HTH_3

Helix-turn-helix

27

76

0.95

PF17765

MLTR_LBD

MmyB-like transcription regulator ligand binding domain

103

273

0.95

PF13560

HTH_31

Helix-turn-helix domain

2

82

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zkc-assembly1.cif.gz_A crystal structure of the master regulator for biofilm formation sinr in complex with dna. 0.889 31 101
4ia8-assembly1.cif.gz_B crystal structure of a y37a mutant of the restriction-modification controller protein c.esp1396i 0.8497 26 105
7ewc-assembly1.cif.gz_A mycobacterium tuberculosis higa2 (form i) 0.8447 31 99
7t5u-assembly1.cif.gz_A structure of e. coli ms115-1 caph n-terminal domain 0.843 30 101
4i6u-assembly1.cif.gz_A crystal structure of a y37f mutant of the restriction-modification controller protein c.esp1396i 0.8421 26 105
ID Description Score Start End Superfamily
1y7yB00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9356 29 101 1.10.260.40
4ybaA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9305 59 99 1.10.260.40
3zkcA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.889 31 101 1.10.260.40
1y7yA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8613 21 101 1.10.260.40
4ia8B00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8496 26 105 1.10.260.40
ID Description Score Start End GO Terms
AF-A0A2S8MG51-F1-model_v4 deleted 0.9711 152 305
AF-A0A7W7S3Z1-F1-model_v4 Transcriptional regulator with XRE-family HTH domain 0.9664 24 113 GO:0003677
AF-A0A0M8XDW4-F1-model_v4 deleted 0.9663 26 301
AF-A0A6B3VRU3-F1-model_v4 deleted 0.9649 30 112
AF-A0A2W4REA5-F1-model_v4 Transcriptional regulator 0.963 25 111 GO:0003677

Map