F203857

General Info

Members Datasets Scaffolds Average Seq Length
148 97 296 571

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_1668993|Ga0436365_1668993_13763_15652
Length 629
Sequence MLTPAAQLTAILRRALAALAPEPPSAEFIASAEVTAAADARFGDYQANAAMTLAKARRTNPRALATEIKARLDLDPELTAISAPVEIAGAGFLNFRLTSAFLATRLGALLADSERVGVEKTGSPQRVVIDFSSPNIAKPMHVGHLRSTILGDCLARIARFLGHEVITDNHLGDWGTQFGKVIYGWKNFLDEQALAVDALAELVRIYKLANDLTDEQKQSAFEEMAERYLAEHRVSEGSAFYSESEAKLRKYFSPVRKAAQKASIVASEGSREELAKLQTGDAENRAIWQRCVDLSRAELEKIYARLGIHFDLWLGESFYNDRLAPLIERLQKIGLAEPSEGALVIFFRDDPKLADKPSIVRKRDGAFNYTTTDIATLEYRVHELGATAIWAVVGAPQALHFEQLNAIGRRLGIAVPTTHIAFGSILGEDRKLMRTRSGDSVALRDLLDEAEERARRIIEEKNPALSADEKAGIARVIGLGAVKYAELSQGRLTDYVFSWDRMLSFQGNTAPYLQNAFVRIQSIFRKLAEAPAPTVANDLHLADPAELALAKKLAQFAEAVPAVLDDFRPNTLANYLYELANDFHAFYEACPVLKSEGATRASRLALCRVTANVLQIGLALLGIDVPARM

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
67 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
68 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
69 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
70 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
76 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
77 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
78 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
79 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
80 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
81 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
82 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
83 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
84 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
85 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
88 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
89 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
90 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
91 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
92 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
93 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
97 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.32
Metatranscriptomes 0
Isolates 0.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.73
Rhizosphere 89.19
Stem 0
Stem Tuber 0
Unclassified 14.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_1668993 3300039437 Bacteria 39268
2 CNXas_1000062 3300000545 Bacteria 20898
3 JGI25406J46586_10000005 3300003203 Bacteria 118289
4 Ga0065712_10069915 3300005290 Bacteria 6509
5 Ga0065715_10012764 3300005293 Unclassified 2550
6 Ga0065715_10091224 3300005293 Bacteria 5971
7 Ga0065715_10093701 3300005293 Bacteria 4594
8 Ga0070670_100001144 3300005331 Bacteria 21043
9 Ga0068869_100077132 3300005334 Unclassified 2478
10 Ga0070687_100002004 3300005343 Bacteria 7458
11 Ga0070661_100016278 3300005344 Bacteria 5256
12 Ga0070668_100013891 3300005347 Bacteria 6021
13 Ga0070671_100002410 3300005355 Bacteria 14452
14 Ga0070659_100008055 3300005366 Bacteria 7682
15 Ga0070703_10004223 3300005406 Bacteria 4044
16 Ga0070713_100003616 3300005436 Bacteria 10227
17 Ga0070711_100046839 3300005439 Bacteria 2948
18 Ga0070708_100015236 3300005445 Bacteria 6342
19 Ga0070708_100016387 3300005445 Bacteria 6148
20 Ga0070708_100045630 3300005445 Bacteria 3862
21 Ga0070708_100057298 3300005445 Unclassified 3469
22 Ga0070678_100053695 3300005456 Bacteria 2932
23 Ga0070662_100012032 3300005457 Bacteria 5728
24 Ga0070706_100000060 3300005467 Bacteria 131097
25 Ga0070706_100006616 3300005467 Bacteria 10931
26 Ga0070706_100044280 3300005467 Unclassified 4111
27 Ga0070706_100047994 3300005467 Bacteria 3941
28 Ga0070706_100183609 3300005467 Bacteria 1953
29 Ga0070707_100000143 3300005468 Bacteria 67554
30 Ga0070707_100127444 3300005468 Bacteria 2473
31 Ga0070707_100133732 3300005468 Bacteria 2412
32 Ga0070707_100137705 3300005468 Unclassified 2375
33 Ga0070698_100001626 3300005471 Bacteria 25023
34 Ga0070698_100002595 3300005471 Bacteria 19907
35 Ga0070698_100008576 3300005471 Bacteria 11025
36 Ga0070698_100016137 3300005471 Bacteria 7887
37 Ga0070699_100009911 3300005518 Bacteria 8253
38 Ga0070699_100014506 3300005518 Bacteria 6777
39 Ga0070699_100045784 3300005518 Bacteria 3786
40 Ga0070684_100035388 3300005535 Bacteria 4274
41 Ga0070684_100106252 3300005535 Bacteria 2512
42 Ga0070697_100001914 3300005536 Bacteria 15928
43 Ga0070697_100003039 3300005536 Bacteria 12879
44 Ga0070697_100004361 3300005536 Bacteria 10855
45 Ga0070697_100006555 3300005536 Bacteria 9017
46 Ga0070697_100028399 3300005536 Bacteria 4479
47 Ga0070686_100015123 3300005544 Unclassified 4462
48 Ga0070695_100018079 3300005545 Bacteria 4280
49 Ga0070665_100005157 3300005548 Bacteria 13520
50 Ga0070665_100091647 3300005548 Bacteria 3044
51 Ga0068859_100059017 3300005617 Bacteria 3865
52 Ga0068860_100000351 3300005843 Bacteria 61888
53 Ga0081455_10006634 3300005937 Bacteria 12376
54 Ga0081540_1000304 3300005983 Bacteria 50828
55 Ga0081540_1005131 3300005983 Bacteria 9812
56 Ga0081539_10000026 3300005985 Bacteria 330830
57 Ga0081539_10009957 3300005985 Bacteria 7832
58 Ga0070717_10094303 3300006028 Bacteria 2531
59 Ga0068871_100043493 3300006358 Bacteria 3608
60 Ga0097620_100059019 3300006931 Bacteria 3865
61 Ga0105242_10012755 3300009176 Bacteria 6472
62 Ga0105237_10097099 3300009545 Bacteria 2937
63 Ga0157374_10017608 3300013296 Bacteria 6293
64 Ga0157378_10094323 3300013297 Unclassified 2725
65 Ga0157372_10047904 3300013307 Bacteria 4750
66 Ga0157375_10000284 3300013308 Bacteria 46158
67 Ga0163163_10026667 3300014325 Bacteria 5526
68 Ga0157379_10022603 3300014968 Bacteria 5571
69 Ga0213872_10009281 3300021361 Bacteria 4722
70 Ga0213872_10013775 3300021361 Bacteria 3784
71 Ga0213876_10000122 3300021384 Bacteria 84684
72 Ga0213876_10049902 3300021384 Bacteria 2211
73 Ga0207666_1000243 3300025271 Bacteria 8019
74 Ga0207697_10000730 3300025315 Bacteria 18652
75 Ga0207697_10001640 3300025315 Bacteria 12108
76 Ga0207697_10016079 3300025315 Bacteria 3086
77 Ga0207653_10005631 3300025885 Bacteria 3910
78 Ga0207647_10012204 3300025904 Bacteria 5989
79 Ga0207684_10000118 3300025910 Bacteria 145120
80 Ga0207684_10060851 3300025910 Bacteria 3207
81 Ga0207693_10022444 3300025915 Bacteria 5015
82 Ga0207693_10056292 3300025915 Bacteria 3083
83 Ga0207693_10106922 3300025915 Bacteria 2195
84 Ga0207663_10088016 3300025916 Unclassified 2053
85 Ga0207662_10015306 3300025918 Unclassified 4316
86 Ga0207652_10024636 3300025921 Bacteria 4993
87 Ga0207646_10000183 3300025922 Bacteria 85731
88 Ga0207646_10000631 3300025922 Bacteria 45798
89 Ga0207646_10032117 3300025922 Bacteria 4750
90 Ga0207646_10043355 3300025922 Bacteria 4041
91 Ga0207646_10063591 3300025922 Bacteria 3294
92 Ga0207664_10005900 3300025929 Bacteria 8379
93 Ga0207644_10001199 3300025931 Bacteria 16676
94 Ga0207706_10001374 3300025933 Bacteria 24317
95 Ga0207706_10015389 3300025933 Bacteria 6911
96 Ga0207686_10015373 3300025934 Bacteria 4279
97 Ga0207709_10087737 3300025935 Bacteria 2023
98 Ga0207670_10016753 3300025936 Bacteria 4413
99 Ga0207691_10113446 3300025940 Unclassified 2408
100 Ga0207678_10005421 3300026067 Bacteria 11423
101 Ga0207683_10089885 3300026121 Unclassified 2734
102 Ga0268264_10113537 3300028381 Bacteria 2377
103 Ga0307513_10025012 3300031456 Bacteria 6930
104 Ga0373943_0009143 3300035170 Unclassified 4441
105 Ga0373927_0065424 3300035695 Bacteria 2352
106 Ga0373947_0014028 3300035725 Bacteria 4594
107 Ga0373947_0022547 3300035725 Bacteria 3653
108 Ga0395899_0125617 3300037312 Unclassified 1835
109 Ga0395900_0019158 3300037418 Bacteria 6979
110 Ga0395900_0114633 3300037418 Unclassified 2766
111 Ga0395898_0004781 3300037466 Bacteria 14738
112 Ga0395905_0028343 3300037471 Bacteria 5279
113 Ga0395901_0001822 3300038443 Bacteria 22031
114 Ga0395901_0055129 3300038443 Unclassified 4133
115 Ga0436365_0354490 3300039437 Bacteria 48646
116 Ga0436365_0422633 3300039437 Bacteria 6246
117 Ga0436365_0714771 3300039437 Bacteria 4415
118 Ga0436365_1416355 3300039437 Bacteria 117881
119 Ga0436360_0088908 3300039438 Bacteria 3446
120 Ga0436360_0653799 3300039438 Bacteria 2454
121 Ga0436361_0080858 3300039447 Unclassified 3532
122 Ga0436361_0126671 3300039447 Bacteria 1913
123 Ga0436361_0181002 3300039447 Bacteria 4985
124 Ga0436361_0192133 3300039447 Bacteria 40746
125 Ga0436361_0367111 3300039447 Bacteria 4118
126 Ga0436361_0665449 3300039447 Bacteria 7313
127 Ga0466964_0019284 3300044706 Bacteria 2621
128 Ga0495592_0001816 3300046454 Bacteria 14999
129 Ga0495628_0004487 3300046516 Bacteria 12363
130 Ga0495630_0056803 3300046517 Unclassified 2932
131 Ga0495652_0022608 3300046529 Bacteria 5579
132 Ga0495587_0057593 3300046536 Unclassified 2284
133 Ga0495645_0010941 3300046543 Bacteria 6372
134 Ga0495599_0000848 3300046678 Bacteria 17189
135 Ga0495646_0003270 3300046680 Bacteria 10086
136 Ga0495613_0051602 3300046689 Bacteria 3031
137 Ga0495604_0024256 3300047317 Unclassified 4840
138 Ga0495674_0094050 3300047319 Unclassified 2557
139 Ga0495684_0101553 3300047471 Bacteria 2174
140 Ga0496101_0117994 3300048904 Bacteria 2004
141 Ga0496105_0124491 3300048908 Bacteria 2125
142 Ga0496108_0064114 3300048911 Bacteria 3095
143 Ga0496109_0062104 3300048912 Unclassified 3416
144 Ga0496112_0009646 3300048915 Bacteria 8711
145 Ga0496112_0058562 3300048915 Bacteria 3794
146 Ga0496114_0093397 3300048917 Bacteria 2558
147 nmdc:mga05p37_319090_c1 3300050507 Bacteria 1839
148 2787506731 2786546548 Bacteria 4745694
149 Ga0436365_1668993
150 CNXas_1000062
151 JGI25406J46586_10000005
152 Ga0065712_10069915
153 Ga0065715_10012764
154 Ga0065715_10091224
155 Ga0065715_10093701
156 Ga0070670_100001144
157 Ga0068869_100077132
158 Ga0070687_100002004
159 Ga0070661_100016278
160 Ga0070668_100013891
161 Ga0070671_100002410
162 Ga0070659_100008055
163 Ga0070703_10004223
164 Ga0070713_100003616
165 Ga0070711_100046839
166 Ga0070708_100015236
167 Ga0070708_100016387
168 Ga0070708_100045630
169 Ga0070708_100057298
170 Ga0070678_100053695
171 Ga0070662_100012032
172 Ga0070706_100000060
173 Ga0070706_100006616
174 Ga0070706_100044280
175 Ga0070706_100047994
176 Ga0070706_100183609
177 Ga0070707_100000143
178 Ga0070707_100127444
179 Ga0070707_100133732
180 Ga0070707_100137705
181 Ga0070698_100001626
182 Ga0070698_100002595
183 Ga0070698_100008576
184 Ga0070698_100016137
185 Ga0070699_100009911
186 Ga0070699_100014506
187 Ga0070699_100045784
188 Ga0070684_100035388
189 Ga0070684_100106252
190 Ga0070697_100001914
191 Ga0070697_100003039
192 Ga0070697_100004361
193 Ga0070697_100006555
194 Ga0070697_100028399
195 Ga0070686_100015123
196 Ga0070695_100018079
197 Ga0070665_100005157
198 Ga0070665_100091647
199 Ga0068859_100059017
200 Ga0068860_100000351
201 Ga0081455_10006634
202 Ga0081540_1000304
203 Ga0081540_1005131
204 Ga0081539_10000026
205 Ga0081539_10009957
206 Ga0070717_10094303
207 Ga0068871_100043493
208 Ga0097620_100059019
209 Ga0105242_10012755
210 Ga0105237_10097099
211 Ga0157374_10017608
212 Ga0157378_10094323
213 Ga0157372_10047904
214 Ga0157375_10000284
215 Ga0163163_10026667
216 Ga0157379_10022603
217 Ga0213872_10009281
218 Ga0213872_10013775
219 Ga0213876_10000122
220 Ga0213876_10049902
221 Ga0207666_1000243
222 Ga0207697_10000730
223 Ga0207697_10001640
224 Ga0207697_10016079
225 Ga0207653_10005631
226 Ga0207647_10012204
227 Ga0207684_10000118
228 Ga0207684_10060851
229 Ga0207693_10022444
230 Ga0207693_10056292
231 Ga0207693_10106922
232 Ga0207663_10088016
233 Ga0207662_10015306
234 Ga0207652_10024636
235 Ga0207646_10000183
236 Ga0207646_10000631
237 Ga0207646_10032117
238 Ga0207646_10043355
239 Ga0207646_10063591
240 Ga0207664_10005900
241 Ga0207644_10001199
242 Ga0207706_10001374
243 Ga0207706_10015389
244 Ga0207686_10015373
245 Ga0207709_10087737
246 Ga0207670_10016753
247 Ga0207691_10113446
248 Ga0207678_10005421
249 Ga0207683_10089885
250 Ga0268264_10113537
251 Ga0307513_10025012
252 Ga0373943_0009143
253 Ga0373927_0065424
254 Ga0373947_0014028
255 Ga0373947_0022547
256 Ga0395899_0125617
257 Ga0395900_0019158
258 Ga0395900_0114633
259 Ga0395898_0004781
260 Ga0395905_0028343
261 Ga0395901_0001822
262 Ga0395901_0055129
263 Ga0436365_0354490
264 Ga0436365_0422633
265 Ga0436365_0714771
266 Ga0436365_1416355
267 Ga0436360_0088908
268 Ga0436360_0653799
269 Ga0436361_0080858
270 Ga0436361_0126671
271 Ga0436361_0181002
272 Ga0436361_0192133
273 Ga0436361_0367111
274 Ga0436361_0665449
275 Ga0466964_0019284
276 Ga0495592_0001816
277 Ga0495628_0004487
278 Ga0495630_0056803
279 Ga0495652_0022608
280 Ga0495587_0057593
281 Ga0495645_0010941
282 Ga0495599_0000848
283 Ga0495646_0003270
284 Ga0495613_0051602
285 Ga0495604_0024256
286 Ga0495674_0094050
287 Ga0495684_0101553
288 Ga0496101_0117994
289 Ga0496105_0124491
290 Ga0496108_0064114
291 Ga0496109_0062104
292 Ga0496112_0009646
293 Ga0496112_0058562
294 Ga0496114_0093397
295 nmdc:mga05p37_319090_c1
296 2787506731

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05746

DALR_1

DALR anticodon binding domain

513

629

0.98

PF00750

tRNA-synt_1d

tRNA synthetases class I (R)

105

499

0.95

PF03485

Arg_tRNA_synt_N

Arginyl tRNA synthetase N terminal domain

6

97

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gdz-assembly4.cif.gz_D crystal structure of arginyl-trna synthetase from klebsiella pneumoniae subsp. pneumoniae 0.9239 2 92
6ao8-assembly1.cif.gz_A crystal structure of arginyl-trna_synthetase from neisseria gonorrhoeae in complex with arginine 0.9226 2 568
6ao8-assembly1.cif.gz_A crystal structure of arginyl-trna_synthetase from neisseria gonorrhoeae in complex with arginine 0.9195 2 568
5yym-assembly2.cif.gz_B crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg 0.9103 1 568
4q2t-assembly1.cif.gz_A crystal structure of arginyl-trna synthetase complexed with l-arginine 0.91 1 568
ID Description Score Start End Superfamily
af_P11875_454_577_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9566 451 568 1.10.730.10
af_A4I2T4_571_692_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9485 451 568 1.10.730.10
af_A0A0P0UYI0_477_598_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9431 451 568 1.10.730.10
af_Q8I5M2_470_590_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9376 453 568 1.10.730.10
af_Q4E397_572_692_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9334 451 568 1.10.730.10
ID Description Score Start End GO Terms
AF-A0A7W1BAC3-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) 0.9729 249 568 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A7W1BAC3-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) 0.9699 249 568 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A2V5RKM4-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) 0.9684 1 344 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A2V5RKM4-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) 0.9656 1 344 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A3E1DW38-F1-model_v4 arginine--tRNA ligase (EC 6.1.1.19) 0.9583 314 568 GO:0004814
GO:0005524
GO:0006420

Map