F203755

General Info

Members Datasets Scaffolds Average Seq Length
148 132 139 443

Family's Representative Sequence

Representative Sequence 3300035695|Ga0373927_0106137|Ga0373927_0106137_90_1520
Length 476
Sequence MTRKFAELYYPSKETFKRIGWLKKTLKETIGMATDQKKTPEIAIRGPVLTFKGDPFRDGLERTMVYESDAIVAFDGGLITHFGPANKVKLQLPANLPITNYGPDALISAGFLDSHVHFPQTPMIAAFGEQLLDWLNKYTFPTERKYADKTFASSVAKVFLDECLKNGITTSCVYCTVFPQSVDALFEEAELRGMRIAAGKVLMNRNAPDYLLDTTKTGYDNSKMLIKKWHGRNRLMYAITPRFAPTSTEDQLESAAVLWREHPDCYLQTHISENKGEIAWVKELFPQRKNYLDVYNHYKLCGPRAVFGHGIHLDDEEMHCMHDTGSAISHCPTSNFFLGSGYFNLNRAMQKDRPVRVGLGTDLGAGTSFSILLTLNEAYKAAQLNNNRLTAGHAYYLATRGTAHAMYIEDKVGSIAPGMEADIVVLNMKSTPIIQYRMQFAKDIHEALFIQMILGDDRAVQATYVAGKLLYSKGIP

Samples

Sample ID Description Type Environment
1 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
2 2711768156 Atlantibacter hermannii DDE1 Isolate Unclassified
3 2846033681 Chromobacterium sinusclupearum MWU13-2610 Isolate Rhizosphere
4 2891670763 Buttiauxella sp. B2 Isolate Rhizosphere
5 2909399089 Nguyenibacter vanlangensis LMG 31431 Isolate Unclassified
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
50 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
51 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
83 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
88 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
89 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
90 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
91 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
95 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
96 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
97 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
98 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
99 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
102 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
103 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
104 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
105 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
106 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
107 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
108 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
109 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
110 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
111 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
115 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
116 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
117 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
118 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
119 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
120 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
121 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
122 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
123 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
124 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
125 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
126 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
127 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
128 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
129 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
130 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
131 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
132 8055693939 Hafnia alvei A23BA Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.92
Metatranscriptomes 0
Isolates 6.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.27
Nodule 2.03
Rhizoplane 0.68
Rhizosphere 71.62
Stem 0
Stem Tuber 0
Unclassified 5.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055531_10001181 3300003794 Bacteria 20069
2 Ga0065704_10075460 3300005289 Bacteria 5578
3 Ga0065715_10100497 3300005293 Unclassified 3295
4 Ga0068868_100036935 3300005338 Bacteria 3784
5 Ga0070689_100083070 3300005340 Bacteria 2517
6 Ga0070673_100032929 3300005364 Bacteria 3908
7 Ga0070667_100039672 3300005367 Bacteria 3947
8 Ga0070714_100036218 3300005435 Bacteria 4138
9 Ga0070713_100000764 3300005436 Bacteria 20606
10 Ga0070710_10003223 3300005437 Bacteria 7730
11 Ga0070711_100000574 3300005439 Bacteria 19187
12 Ga0070663_100126881 3300005455 Bacteria 1934
13 Ga0070662_100063579 3300005457 Bacteria 2700
14 Ga0070681_10234023 3300005458 Bacteria 1751
15 Ga0070706_100041330 3300005467 Bacteria 4257
16 Ga0070698_100000346 3300005471 Bacteria 47866
17 Ga0070698_100289961 3300005471 Bacteria 1568
18 Ga0068853_100023064 3300005539 Bacteria 5207
19 Ga0068853_100129710 3300005539 Bacteria 2256
20 Ga0070665_100002087 3300005548 Bacteria 22404
21 Ga0068855_100137649 3300005563 Bacteria 2785
22 Ga0070664_100096779 3300005564 Bacteria 2562
23 Ga0068854_100042098 3300005578 Bacteria 3231
24 Ga0068856_100031678 3300005614 Bacteria 5175
25 Ga0068864_100079623 3300005618 Bacteria 2869
26 Ga0068864_100258997 3300005618 Bacteria 1617
27 Ga0068861_100074656 3300005719 Bacteria 2637
28 Ga0068863_100037144 3300005841 Bacteria 4638
29 Ga0068858_100034748 3300005842 Bacteria 4676
30 Ga0068860_100079726 3300005843 Bacteria 3113
31 Ga0081455_10001725 3300005937 Bacteria 26473
32 Ga0081455_10003768 3300005937 Bacteria 17307
33 Ga0081455_10059739 3300005937 Bacteria 3217
34 Ga0081539_10004477 3300005985 Bacteria 15388
35 Ga0081539_10010561 3300005985 Bacteria 7472
36 Ga0070717_10047372 3300006028 Bacteria 3522
37 Ga0075365_10083764 3300006038 Bacteria 2163
38 Ga0075363_100019896 3300006048 Bacteria 3360
39 Ga0075364_10059561 3300006051 Bacteria 2503
40 Ga0070715_10014520 3300006163 Bacteria 2919
41 Ga0070712_100013941 3300006175 Bacteria 5149
42 Ga0075362_10009512 3300006177 Bacteria 3762
43 Ga0075362_10010109 3300006177 Bacteria 3673
44 Ga0075366_10044068 3300006195 Bacteria 2644
45 Ga0097621_100037517 3300006237 Bacteria 3884
46 Ga0068871_100054408 3300006358 Bacteria 3247
47 Ga0075428_100096054 3300006844 Bacteria 3230
48 Ga0075430_100199887 3300006846 Unclassified 1660
49 Ga0075431_100057741 3300006847 Bacteria 4003
50 Ga0068865_100021959 3300006881 Bacteria 4156
51 Ga0079104_1000046 3300006946 Bacteria 183396
52 Ga0105244_10006086 3300009036 Bacteria 7889
53 Ga0105250_10007864 3300009092 Bacteria 4560
54 Ga0105250_10035144 3300009092 Bacteria 2011
55 Ga0105240_10030859 3300009093 Bacteria 6961
56 Ga0111539_10113540 3300009094 Bacteria 3177
57 Ga0105237_10044072 3300009545 Bacteria 4492
58 Ga0099796_10009834 3300010159 Bacteria 2605
59 Ga0105239_10051506 3300010375 Bacteria 4513
60 Ga0157370_10000450 3300013104 Bacteria 51371
61 Ga0157369_10165205 3300013105 Bacteria 2335
62 Ga0157378_10069641 3300013297 Bacteria 3156
63 Ga0157372_10134143 3300013307 Bacteria 2850
64 Ga0157380_10193774 3300014326 Bacteria 1797
65 Ga0209676_1004420 3300025292 Bacteria 7844
66 Ga0209025_1021330 3300025294 Bacteria 3493
67 Ga0209025_1024100 3300025294 Bacteria 3155
68 Ga0209050_1013937 3300025298 Bacteria 3519
69 Ga0209256_1000457 3300025299 Bacteria 61666
70 Ga0209257_1000080 3300025304 Bacteria 312038
71 Ga0207696_1001243 3300025711 Bacteria 14396
72 Ga0207688_10075778 3300025901 Bacteria 1915
73 Ga0207680_10097587 3300025903 Bacteria 1882
74 Ga0207685_10006129 3300025905 Bacteria 3247
75 Ga0207699_10005897 3300025906 Bacteria 5893
76 Ga0207684_10055925 3300025910 Bacteria 3347
77 Ga0207693_10001301 3300025915 Bacteria 22163
78 Ga0207693_10107475 3300025915 Bacteria 2189
79 Ga0207663_10017030 3300025916 Bacteria 4042
80 Ga0207664_10001391 3300025929 Bacteria 15892
81 Ga0207690_10050326 3300025932 Bacteria 2781
82 Ga0207706_10100195 3300025933 Bacteria 2549
83 Ga0207704_10003963 3300025938 Bacteria 6735
84 Ga0207658_10097484 3300025986 Bacteria 2295
85 Ga0207678_10071093 3300026067 Bacteria 2983
86 Ga0207675_100071352 3300026118 Bacteria 3247
87 Ga0209281_1000022 3300027111 Bacteria 522913
88 Ga0209281_1001126 3300027111 Bacteria 19167
89 Ga0209983_1004490 3300027665 Bacteria 2931
90 Ga0268266_10049909 3300028379 Bacteria 3589
91 Ga0265327_10000426 3300031251 Bacteria 76984
92 Ga0307513_10102442 3300031456 Bacteria 2882
93 Ga0265314_10034500 3300031711 Bacteria 3699
94 Ga0265342_10002731 3300031712 Bacteria 15016
95 Ga0316578_10010390 3300031728 Bacteria 4832
96 Ga0307405_10006046 3300031731 Bacteria 5919
97 Ga0307406_10010935 3300031901 Bacteria 5134
98 Ga0307409_100064243 3300031995 Bacteria 2882
99 Ga0307416_100335895 3300032002 Bacteria 1521
100 Ga0316574_0007081 3300035398 Bacteria 6121
101 Ga0373927_0106137 3300035695 Bacteria 1829
102 Ga0316584_0040977 3300036712 Bacteria 3452
103 Ga0373925_0053775 3300037068 Bacteria 3011
104 Ga0237816_00713 3300039145 Bacteria 2799
105 Ga0436360_0489853 3300039438 Bacteria 10333
106 Ga0436361_0004008 3300039447 Bacteria 6148
107 Ga0451791_0761472 3300041451 Bacteria 3343
108 Ga0451837_1761016 3300041494 Bacteria 2189
109 Ga0439443_001337 3300042003 Bacteria 2673
110 Ga0495606_0000740 3300046507 Bacteria 50470
111 Ga0495621_0023685 3300046539 Bacteria 2044
112 Ga0495597_0002637 3300046542 Bacteria 11144
113 Ga0495656_0020232 3300046615 Bacteria 2579
114 Ga0495659_0023746 3300046664 Bacteria 2086
115 Ga0495588_0010852 3300046674 Bacteria 4256
116 Ga0495671_0029135 3300046692 Bacteria 2837
117 Ga0495636_0003766 3300047318 Bacteria 5903
118 Ga0495636_0009003 3300047318 Bacteria 3928
119 Ga0501034_0189054 3300049571 Bacteria 2022
120 Ga0501043_0010653 3300049579 Bacteria 7201
121 Ga0501077_0090843 3300049593 Bacteria 1935
122 nmdc:mga03683_1353_c2 3300050489 Bacteria 6311
123 nmdc:mga03683_1894_c1 3300050489 Bacteria 6382
124 nmdc:mga0yw44_26379_c1 3300050492 Bacteria 3318
125 nmdc:mga0yw44_29375_c1 3300050492 Bacteria 3174
126 nmdc:mga0k408_20370_c1 3300050493 Bacteria 3715
127 nmdc:mga06z11_19948_c1 3300050494 Bacteria 3091
128 nmdc:mga07m45_34527_c1 3300050496 Bacteria 2811
129 nmdc:mga07m45_74137_c1 3300050496 Bacteria 1939
130 nmdc:mga06r32_48425_c1 3300050510 Bacteria 4062
131 nmdc:mga0sz30_11125_c1 3300050516 Bacteria 3465
132 Ga0500651_0063129 3300053093 Bacteria 2312
133 Ga0500641_0014818 3300053096 Bacteria 2881
134 Ga0500650_0000224 3300053098 Bacteria 13852
135 Ga0500595_013467 3300053119 Bacteria 3132
136 Ga0500642_0006764 3300053130 Bacteria 3805
137 Ga0500616_0003362 3300053153 Bacteria 12298
138 Ga0500616_0003430 3300053153 Bacteria 12111
139 Ga0500552_000103 3300053733 Bacteria 7092

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005937 Ga0081455_10003768 Ga0081455_1000376812 396
2 3300035398 Ga0316574_0007081 Ga0316574_0007081_3911_5149 412
3 3300039438 Ga0436360_0489853 Ga0436360_0489853_3281_4549 412
4 3300005937 Ga0081455_10001725 Ga0081455_1000172516 413
5 3300050489 nmdc:mga03683_1353_c2 nmdc:mga03683_1353_c2_2921_4192 413
6 3300050496 nmdc:mga07m45_74137_c1 nmdc:mga07m45_74137_c1_54_1325 413
7 3300050516 nmdc:mga0sz30_11125_c1 nmdc:mga0sz30_11125_c1_517_1788 413
8 3300027665 Ga0209983_1004490 Ga0209983_10044902 422
9 3300009093 Ga0105240_10030859 Ga0105240_100308592 426
10 3300013104 Ga0157370_10000450 Ga0157370_1000045014 426
11 3300046507 Ga0495606_0000740 Ga0495606_0000740_41330_42631 426
12 3300005539 Ga0068853_100129710 Ga0068853_1001297101 427
13 3300050492 nmdc:mga0yw44_29375_c1 nmdc:mga0yw44_29375_c1_1679_2986 427
14 3300005548 Ga0070665_100002087 Ga0070665_1000020872 431
15 3300005719 Ga0068861_100074656 Ga0068861_1000746562 431
16 3300026118 Ga0207675_100071352 Ga0207675_1000713523 431
17 3300028379 Ga0268266_10049909 Ga0268266_100499093 431
18 iso_pu_bacteria 2909399089 2909402533 431
19 iso_pu_bacteria 640427133 640489028 431
20 iso_pu_bacteria 2846033681 2846037591 432
21 3300046692 Ga0495671_0029135 Ga0495671_0029135_27_1328 433
22 3300049593 Ga0501077_0090843 Ga0501077_0090843_458_1768 433
23 iso_pu_bacteria 2711768156 2712471046 433
24 iso_pu_bacteria 2891670763 2891672655 433
25 iso_pu_bacteria 8055693939 8055697901 433
26 3300006051 Ga0075364_10059561 Ga0075364_100595612 435
27 3300006946 Ga0079104_1000046 Ga0079104_100004620 435
28 3300009036 Ga0105244_10006086 Ga0105244_100060866 435
29 3300009092 Ga0105250_10035144 Ga0105250_100351442 435
30 3300027111 Ga0209281_1000022 Ga0209281_100002222 435
31 3300046542 Ga0495597_0002637 Ga0495597_0002637_8138_9454 435
32 3300046674 Ga0495588_0010852 Ga0495588_0010852_1267_2583 435
33 3300005293 Ga0065715_10100497 Ga0065715_101004972 436
34 3300031731 Ga0307405_10006046 Ga0307405_100060462 438
35 3300031901 Ga0307406_10010935 Ga0307406_100109352 438
36 3300031995 Ga0307409_100064243 Ga0307409_1000642432 438
37 3300032002 Ga0307416_100335895 Ga0307416_1003358952 438
38 3300050493 nmdc:mga0k408_20370_c1 nmdc:mga0k408_20370_c1_1339_2658 439
39 3300053098 Ga0500650_0000224 Ga0500650_0000224_6012_7340 439
40 iso_pu_bacteria 2574179768 2574431842 439
41 3300005338 Ga0068868_100036935 Ga0068868_1000369352 440
42 3300005340 Ga0070689_100083070 Ga0070689_1000830702 440
43 3300005364 Ga0070673_100032929 Ga0070673_1000329293 440
44 3300005367 Ga0070667_100039672 Ga0070667_1000396722 440
45 3300005435 Ga0070714_100036218 Ga0070714_1000362184 440
46 3300005436 Ga0070713_100000764 Ga0070713_1000007643 440
47 3300005437 Ga0070710_10003223 Ga0070710_100032234 440
48 3300005439 Ga0070711_100000574 Ga0070711_1000005744 440
49 3300005455 Ga0070663_100126881 Ga0070663_1001268812 440
50 3300005457 Ga0070662_100063579 Ga0070662_1000635792 440
51 3300005471 Ga0070698_100289961 Ga0070698_1002899612 440
52 3300005539 Ga0068853_100023064 Ga0068853_1000230642 440
53 3300005563 Ga0068855_100137649 Ga0068855_1001376493 440
54 3300005564 Ga0070664_100096779 Ga0070664_1000967792 440
55 3300005578 Ga0068854_100042098 Ga0068854_1000420982 440
56 3300005614 Ga0068856_100031678 Ga0068856_1000316783 440
57 3300005618 Ga0068864_100079623 Ga0068864_1000796233 440
58 3300005841 Ga0068863_100037144 Ga0068863_1000371443 440
59 3300005842 Ga0068858_100034748 Ga0068858_1000347483 440
60 3300005843 Ga0068860_100079726 Ga0068860_1000797261 440
61 3300005937 Ga0081455_10059739 Ga0081455_100597392 440
62 3300006028 Ga0070717_10047372 Ga0070717_100473723 440
63 3300006048 Ga0075363_100019896 Ga0075363_1000198962 440
64 3300006163 Ga0070715_10014520 Ga0070715_100145202 440
65 3300006175 Ga0070712_100013941 Ga0070712_1000139415 440
66 3300006237 Ga0097621_100037517 Ga0097621_1000375172 440
67 3300006358 Ga0068871_100054408 Ga0068871_1000544082 440
68 3300006844 Ga0075428_100096054 Ga0075428_1000960542 440
69 3300006846 Ga0075430_100199887 Ga0075430_1001998872 440
70 3300006847 Ga0075431_100057741 Ga0075431_1000577412 440
71 3300006881 Ga0068865_100021959 Ga0068865_1000219593 440
72 3300009094 Ga0111539_10113540 Ga0111539_101135403 440
73 3300009545 Ga0105237_10044072 Ga0105237_100440723 440
74 3300010375 Ga0105239_10051506 Ga0105239_100515064 440
75 3300013307 Ga0157372_10134143 Ga0157372_101341432 440
76 3300025901 Ga0207688_10075778 Ga0207688_100757782 440
77 3300025903 Ga0207680_10097587 Ga0207680_100975872 440
78 3300025905 Ga0207685_10006129 Ga0207685_100061294 440
79 3300025906 Ga0207699_10005897 Ga0207699_100058976 440
80 3300025915 Ga0207693_10001301 Ga0207693_100013014 440
81 3300025915 Ga0207693_10107475 Ga0207693_101074751 440
82 3300025916 Ga0207663_10017030 Ga0207663_100170304 440
83 3300025929 Ga0207664_10001391 Ga0207664_1000139117 440
84 3300025932 Ga0207690_10050326 Ga0207690_100503262 440
85 3300025933 Ga0207706_10100195 Ga0207706_101001952 440
86 3300025938 Ga0207704_10003963 Ga0207704_100039634 440
87 3300025986 Ga0207658_10097484 Ga0207658_100974842 440
88 3300026067 Ga0207678_10071093 Ga0207678_100710933 440
89 3300031251 Ga0265327_10000426 Ga0265327_100004262 440
90 3300047318 Ga0495636_0003766 Ga0495636_0003766_3172_4494 440
91 3300050510 nmdc:mga06r32_48425_c1 nmdc:mga06r32_48425_c1_1844_3175 440
92 3300005618 Ga0068864_100258997 Ga0068864_1002589971 441
93 3300041451 Ga0451791_0761472 Ga0451791_0761472_633_1961 441
94 3300041494 Ga0451837_1761016 Ga0451837_1761016_331_1659 441
95 3300049571 Ga0501034_0189054 Ga0501034_0189054_364_1710 441
96 3300049579 Ga0501043_0010653 Ga0501043_0010653_4651_5976 441
97 3300053096 Ga0500641_0014818 Ga0500641_0014818_823_2172 441
98 iso_pu_bacteria 641228493 641337120 441
99 iso_pu_bacteria 643348555 643392705 441
100 3300005289 Ga0065704_10075460 Ga0065704_100754604 442
101 3300005458 Ga0070681_10234023 Ga0070681_102340231 442
102 3300005471 Ga0070698_100000346 Ga0070698_10000034643 442
103 3300006038 Ga0075365_10083764 Ga0075365_100837643 442
104 3300009092 Ga0105250_10007864 Ga0105250_100078643 442
105 3300013297 Ga0157378_10069641 Ga0157378_100696412 442
106 3300014326 Ga0157380_10193774 Ga0157380_101937742 442
107 3300025294 Ga0209025_1021330 Ga0209025_10213302 442
108 3300025711 Ga0207696_1001243 Ga0207696_10012435 442
109 3300027111 Ga0209281_1001126 Ga0209281_100112612 442
110 3300053153 Ga0500616_0003362 Ga0500616_0003362_2125_3462 442
111 3300005467 Ga0070706_100041330 Ga0070706_1000413303 443
112 3300005985 Ga0081539_10010561 Ga0081539_100105614 443
113 3300006177 Ga0075362_10010109 Ga0075362_100101095 443
114 3300006195 Ga0075366_10044068 Ga0075366_100440682 443
115 3300025910 Ga0207684_10055925 Ga0207684_100559252 443
116 3300031728 Ga0316578_10010390 Ga0316578_100103904 443
117 3300036712 Ga0316584_0040977 Ga0316584_0040977_47_1381 443
118 3300039145 Ga0237816_00713 Ga0237816_00713_164_1495 443
119 3300046539 Ga0495621_0023685 Ga0495621_0023685_626_1957 443
120 3300046615 Ga0495656_0020232 Ga0495656_0020232_522_1853 443
121 3300046664 Ga0495659_0023746 Ga0495659_0023746_12_1343 443
122 3300047318 Ga0495636_0009003 Ga0495636_0009003_2238_3569 443
123 3300050489 nmdc:mga03683_1894_c1 nmdc:mga03683_1894_c1_3528_4886 443
124 3300050492 nmdc:mga0yw44_26379_c1 nmdc:mga0yw44_26379_c1_1725_3059 443
125 3300050494 nmdc:mga06z11_19948_c1 nmdc:mga06z11_19948_c1_493_1845 443
126 3300053119 Ga0500595_013467 Ga0500595_013467_535_1905 443
127 3300053130 Ga0500642_0006764 Ga0500642_0006764_534_1874 443
128 3300053153 Ga0500616_0003430 Ga0500616_0003430_6566_7918 443
129 3300053733 Ga0500552_000103 Ga0500552_000103_3333_4679 443
130 3300003794 Ga0055531_10001181 Ga0055531_100011817 444
131 3300005985 Ga0081539_10004477 Ga0081539_1000447713 444
132 3300006177 Ga0075362_10009512 Ga0075362_100095123 444
133 3300010159 Ga0099796_10009834 Ga0099796_100098342 444
134 3300013105 Ga0157369_10165205 Ga0157369_101652052 444
135 3300025292 Ga0209676_1004420 Ga0209676_10044203 444
136 3300025294 Ga0209025_1024100 Ga0209025_10241002 444
137 3300025298 Ga0209050_1013937 Ga0209050_10139371 444
138 3300025299 Ga0209256_1000457 Ga0209256_100045724 444
139 3300025304 Ga0209257_1000080 Ga0209257_1000080302 444
140 3300031456 Ga0307513_10102442 Ga0307513_101024421 444
141 3300031711 Ga0265314_10034500 Ga0265314_100345004 444
142 3300031712 Ga0265342_10002731 Ga0265342_100027312 444
143 3300035695 Ga0373927_0106137 Ga0373927_0106137_90_1520 444
144 3300037068 Ga0373925_0053775 Ga0373925_0053775_1546_2931 444
145 3300039447 Ga0436361_0004008 Ga0436361_0004008_2071_3468 444
146 3300042003 Ga0439443_001337 Ga0439443_001337_114_1466 444
147 3300050496 nmdc:mga07m45_34527_c1 nmdc:mga07m45_34527_c1_350_1714 444
148 3300053093 Ga0500651_0063129 Ga0500651_0063129_262_1626 444

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01979

Amidohydro_1

Amidohydrolase family

106

470

0.92

PF07969

Amidohydro_3

Amidohydrolase family

297

471

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ohc-assembly1.cif.gz_A e. coli guanine deaminase 0.9796 10 442
6ohc-assembly2.cif.gz_C e. coli guanine deaminase 0.9795 10 442
6ohc-assembly2.cif.gz_D e. coli guanine deaminase 0.9789 10 442
6ohc-assembly1.cif.gz_B e. coli guanine deaminase 0.9753 10 442
6ohb-assembly2.cif.gz_D e. coli guanine deaminase 0.9744 10 442
ID Description Score Start End Superfamily
af_P76641_77_378_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9917 78 381 3.20.20.140
af_P76641_77_378_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9885 78 381 3.20.20.140
2oodA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9694 78 381 3.20.20.140
af_Q07729_95_405_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9655 78 381 3.20.20.140
af_Q9VMY9_69_390_3.20.20.140 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9589 78 381 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A0B4EDJ7-F1-model_v4 Guanine deaminase 0.9988 103 217 GO:0005829
GO:0008270
GO:0008892
GO:0046098
AF-A0A550II94-F1-model_v4 deleted 0.9975 108 231
AF-A0A1B6VQW8-F1-model_v4 deleted 0.9946 10 442
AF-A0A6M1IAA5-F1-model_v4 deleted 0.9944 136 260
AF-T1BE32-F1-model_v4 Guanine deaminase 0.994 147 405 GO:0005829
GO:0008270
GO:0008892
GO:0046098

Feature Viewer

pLDDT pTM Quality
95.13 0.94 High
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Predicted Structure (AlphaFold2)

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