F203207

General Info

Members Datasets Scaffolds Average Seq Length
148 114 296 292

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10564978|Ga0157375_105649781
Length 313
Sequence MTPHSRQKRRQQIMTEPTTRHRPRVAANPIPYWVRDGVVDKSKGVFDQAFADFQSIGFTAVKADVPEGMTARDYADWIASYGLAPSLSLFSSPFDETIDIKQEVERAKAFAADQVALGLDRTMVSSMALPARMAEPAVGAGFDEDRLQLAIENVGQVCRALAAEGLRPLHHSHVGGVFETETEIARLLDTLGKDVIGFGPDTGHLRWAGIDPAALIARYADRIGGIHIKDCFPDYLDPATRRGLSYHQVSGTKRLWAEPGLGVVDFKAVIAAMPADYDGDYMIEVDEPSVDSRYDSHKMSYTWASEALGFAQI

Samples

Sample ID Description Type Environment
1 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
13 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
26 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
27 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
28 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
29 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
50 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
51 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
52 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
53 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
54 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
55 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
56 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
57 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
58 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
59 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
60 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
66 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
67 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
68 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
69 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
70 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
73 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
74 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
75 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
76 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
77 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
78 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
79 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
80 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
81 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
82 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
83 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
84 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
87 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
88 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
89 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
90 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
93 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
94 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
95 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
107 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
108 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
109 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
110 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
111 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
112 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
113 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
114 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.62
Metatranscriptomes 0
Isolates 3.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.35
Nodule 0
Rhizoplane 16.89
Rhizosphere 66.89
Stem 0
Stem Tuber 0
Unclassified 0.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157375_10564978 3300013308 Bacteria 1298
2 rootH1_10087750 3300003316 Unclassified 1425
3 rootL2_10000149 3300003322 Bacteria 3765
4 Ga0070683_100150567 3300005329 Bacteria 2206
5 Ga0070682_100080299 3300005337 Bacteria 2109
6 Ga0070682_100374588 3300005337 Bacteria 1069
7 Ga0070668_100000773 3300005347 Bacteria 22048
8 Ga0070669_100350056 3300005353 Bacteria 1199
9 Ga0070675_100269110 3300005354 Bacteria 1495
10 Ga0070674_100169926 3300005356 Bacteria 1661
11 Ga0070667_100082437 3300005367 Bacteria 2754
12 Ga0070663_100200578 3300005455 Bacteria 1557
13 Ga0068852_100476229 3300005616 Bacteria 1240
14 Ga0068861_100254877 3300005719 Bacteria 1499
15 Ga0068858_100072666 3300005842 Bacteria 3191
16 Ga0068860_100064997 3300005843 Bacteria 3465
17 Ga0068862_100109604 3300005844 Bacteria 2422
18 Ga0081455_10003993 3300005937 Bacteria 16753
19 Ga0081455_10014300 3300005937 Bacteria 7787
20 Ga0081455_10203218 3300005937 Bacteria 1482
21 Ga0081538_10000050 3300005981 Bacteria 110501
22 Ga0081538_10076240 3300005981 Bacteria 1814
23 Ga0081540_1007558 3300005983 Bacteria 7730
24 Ga0081539_10000877 3300005985 Bacteria 57649
25 Ga0081539_10001776 3300005985 Bacteria 34326
26 Ga0081539_10003681 3300005985 Bacteria 18365
27 Ga0070717_10198420 3300006028 Bacteria 1757
28 Ga0070717_10555688 3300006028 Bacteria 1040
29 Ga0105243_10035310 3300009148 Bacteria 3875
30 Ga0105242_10534733 3300009176 Bacteria 1121
31 Ga0105248_10531997 3300009177 Bacteria 1326
32 Ga0105238_10264069 3300009551 Bacteria 1701
33 Ga0105249_10173088 3300009553 Bacteria 2095
34 Ga0105246_10466109 3300011119 Bacteria 1065
35 Ga0157371_10060653 3300013102 Bacteria 2682
36 Ga0157370_10007138 3300013104 Bacteria 12185
37 Ga0157369_10008886 3300013105 Bacteria 11510
38 Ga0157369_10028078 3300013105 Bacteria 6231
39 Ga0157372_10133295 3300013307 Bacteria 2860
40 Ga0157372_10386129 3300013307 Bacteria 1631
41 Ga0163163_10825977 3300014325 Bacteria 990
42 Ga0157380_10042405 3300014326 Bacteria 3557
43 Ga0157376_10056719 3300014969 Bacteria 3274
44 Ga0207688_10014759 3300025901 Bacteria 4239
45 Ga0207652_10043734 3300025921 Bacteria 3814
46 Ga0207687_10394376 3300025927 Bacteria 1137
47 Ga0207706_10311489 3300025933 Bacteria 1371
48 Ga0207709_10168716 3300025935 Bacteria 1534
49 Ga0207669_10240036 3300025937 Bacteria 1343
50 Ga0207658_10038695 3300025986 Bacteria 3438
51 Ga0207703_10058559 3300026035 Bacteria 3144
52 Ga0207703_10359406 3300026035 Bacteria 1343
53 Ga0207702_10057256 3300026078 Bacteria 3313
54 Ga0207675_100314466 3300026118 Bacteria 1528
55 Ga0207683_10455479 3300026121 Bacteria 1180
56 Ga0207698_10346833 3300026142 Bacteria 1401
57 Ga0268266_10125249 3300028379 Bacteria 2292
58 Ga0268265_10089533 3300028380 Bacteria 2455
59 Ga0307515_10000817 3300028794 Bacteria 71687
60 Ga0307515_10004346 3300028794 Bacteria 29398
61 Ga0307515_10098891 3300028794 Bacteria 3548
62 Ga0307512_10005532 3300030522 Bacteria 13158
63 Ga0307512_10005712 3300030522 Bacteria 12839
64 Ga0307512_10096365 3300030522 Bacteria 2029
65 Ga0307513_10005111 3300031456 Bacteria 17367
66 Ga0307513_10018053 3300031456 Bacteria 8444
67 Ga0307509_10176662 3300031507 Bacteria 2007
68 Ga0307408_100006927 3300031548 Bacteria 7503
69 Ga0307508_10006159 3300031616 Bacteria 11316
70 Ga0307508_10045567 3300031616 Bacteria 3918
71 Ga0307508_10096785 3300031616 Bacteria 2543
72 Ga0307516_10000147 3300031730 Bacteria 86945
73 Ga0307516_10057405 3300031730 Bacteria 3792
74 Ga0307516_10062854 3300031730 Bacteria 3596
75 Ga0307516_10081610 3300031730 Bacteria 3076
76 Ga0307413_10158015 3300031824 Bacteria 1589
77 Ga0307410_10011941 3300031852 Bacteria 4994
78 Ga0307410_10423080 3300031852 Bacteria 1081
79 Ga0326468_10000005 3300031889 Bacteria 15246
80 Ga0307406_10002392 3300031901 Bacteria 10196
81 Ga0307407_10025290 3300031903 Bacteria 3127
82 Ga0307412_10135890 3300031911 Bacteria 1794
83 Ga0307409_100010913 3300031995 Bacteria 5687
84 Ga0307416_100001294 3300032002 Bacteria 13497
85 Ga0307415_100007059 3300032126 Bacteria 6111
86 Ga0373950_0013767 3300034818 Bacteria 1354
87 Ga0373940_0035327 3300035088 Bacteria 1352
88 Ga0373951_0000095 3300035091 Bacteria 34065
89 Ga0373942_0000014 3300035207 Bacteria 33319
90 Ga0373962_0002717 3300035242 Bacteria 4211
91 Ga0373935_0152687 3300035692 Bacteria 1568
92 Ga0395901_0093112 3300038443 Bacteria 3155
93 Ga0451789_0522790 3300041443 Bacteria 2207
94 Ga0451791_0682830 3300041451 Bacteria 2259
95 Ga0451791_0826479 3300041451 Bacteria 1375
96 Ga0451793_0610369 3300041452 Bacteria 6979
97 Ga0451793_0772932 3300041452 Bacteria 2533
98 Ga0451797_0901465 3300041453 Bacteria 3471
99 Ga0451802_0165044 3300041460 Bacteria 1261
100 Ga0451837_0758893 3300041494 Bacteria 995
101 Ga0451849_0330070 3300041505 Bacteria 832
102 Ga0451843_1674780 3300041509 Bacteria 1411
103 Ga0466965_0028963 3300044683 Bacteria 2693
104 Ga0466971_0043392 3300044719 Bacteria 2021
105 Ga0466957_0267779 3300044842 Bacteria 1140
106 Ga0466960_0024778 3300044901 Bacteria 2710
107 Ga0466959_0217662 3300045049 Bacteria 1325
108 Ga0466967_0013909 3300045976 Bacteria 6242
109 Ga0466967_0133459 3300045976 Bacteria 2307
110 Ga0495629_0057104 3300046459 Bacteria 2730
111 Ga0495653_0038169 3300046463 Bacteria 3770
112 Ga0495653_0068223 3300046463 Bacteria 2668
113 Ga0495608_0249319 3300046511 Bacteria 1107
114 Ga0495632_0071133 3300046519 Bacteria 1672
115 Ga0495665_0098486 3300046531 Bacteria 1535
116 Ga0495634_0134362 3300046642 Bacteria 1575
117 Ga0495657_0176351 3300046675 Bacteria 1314
118 Ga0495658_0294727 3300046683 Bacteria 1025
119 Ga0495671_0084532 3300046692 Bacteria 1555
120 Ga0495581_0092468 3300047315 Bacteria 1756
121 Ga0495674_0160572 3300047319 Bacteria 1881
122 Ga0496100_0058261 3300048903 Bacteria 2534
123 Ga0496100_0245064 3300048903 Bacteria 1324
124 Ga0496102_0019036 3300048905 Bacteria 6042
125 Ga0496102_0021446 3300048905 Bacteria 5712
126 Ga0496102_0062754 3300048905 Bacteria 3403
127 Ga0496104_0001758 3300048907 Bacteria 18724
128 Ga0496104_0447116 3300048907 Bacteria 1204
129 Ga0496105_0000734 3300048908 Bacteria 22250
130 Ga0496108_0000435 3300048911 Bacteria 33635
131 Ga0496108_0035232 3300048911 Bacteria 4159
132 Ga0496108_0080957 3300048911 Bacteria 2752
133 Ga0496108_0168771 3300048911 Bacteria 1893
134 Ga0496109_0001794 3300048912 Bacteria 17842
135 Ga0496109_0224517 3300048912 Bacteria 1767
136 Ga0496112_0123807 3300048915 Bacteria 2557
137 Ga0496113_0109148 3300048916 Bacteria 2151
138 Ga0496114_0027303 3300048917 Bacteria 4675
139 Ga0496114_0259405 3300048917 Bacteria 1530
140 Ga0501033_0102433 3300049570 Bacteria 2088
141 Ga0495595_0032182 3300053084 Bacteria 2361
142 Ga0500573_0116198 3300053140 Bacteria 1493
143 Ga0500579_034448 3300053143 Bacteria 3230
144 2729907720 2728369276 Bacteria 5610032
145 2753264164 2751185782 Bacteria 11227053
146 2857731020 2857729791 Bacteria 4040535
147 2928122418 2928121344 Bacteria 3972376
148 2939658762 2939657138 Bacteria 3740283
149 Ga0157375_10564978
150 rootH1_10087750
151 rootL2_10000149
152 Ga0070683_100150567
153 Ga0070682_100080299
154 Ga0070682_100374588
155 Ga0070668_100000773
156 Ga0070669_100350056
157 Ga0070675_100269110
158 Ga0070674_100169926
159 Ga0070667_100082437
160 Ga0070663_100200578
161 Ga0068852_100476229
162 Ga0068861_100254877
163 Ga0068858_100072666
164 Ga0068860_100064997
165 Ga0068862_100109604
166 Ga0081455_10003993
167 Ga0081455_10014300
168 Ga0081455_10203218
169 Ga0081538_10000050
170 Ga0081538_10076240
171 Ga0081540_1007558
172 Ga0081539_10000877
173 Ga0081539_10001776
174 Ga0081539_10003681
175 Ga0070717_10198420
176 Ga0070717_10555688
177 Ga0105243_10035310
178 Ga0105242_10534733
179 Ga0105248_10531997
180 Ga0105238_10264069
181 Ga0105249_10173088
182 Ga0105246_10466109
183 Ga0157371_10060653
184 Ga0157370_10007138
185 Ga0157369_10008886
186 Ga0157369_10028078
187 Ga0157372_10133295
188 Ga0157372_10386129
189 Ga0163163_10825977
190 Ga0157380_10042405
191 Ga0157376_10056719
192 Ga0207688_10014759
193 Ga0207652_10043734
194 Ga0207687_10394376
195 Ga0207706_10311489
196 Ga0207709_10168716
197 Ga0207669_10240036
198 Ga0207658_10038695
199 Ga0207703_10058559
200 Ga0207703_10359406
201 Ga0207702_10057256
202 Ga0207675_100314466
203 Ga0207683_10455479
204 Ga0207698_10346833
205 Ga0268266_10125249
206 Ga0268265_10089533
207 Ga0307515_10000817
208 Ga0307515_10004346
209 Ga0307515_10098891
210 Ga0307512_10005532
211 Ga0307512_10005712
212 Ga0307512_10096365
213 Ga0307513_10005111
214 Ga0307513_10018053
215 Ga0307509_10176662
216 Ga0307408_100006927
217 Ga0307508_10006159
218 Ga0307508_10045567
219 Ga0307508_10096785
220 Ga0307516_10000147
221 Ga0307516_10057405
222 Ga0307516_10062854
223 Ga0307516_10081610
224 Ga0307413_10158015
225 Ga0307410_10011941
226 Ga0307410_10423080
227 Ga0326468_10000005
228 Ga0307406_10002392
229 Ga0307407_10025290
230 Ga0307412_10135890
231 Ga0307409_100010913
232 Ga0307416_100001294
233 Ga0307415_100007059
234 Ga0373950_0013767
235 Ga0373940_0035327
236 Ga0373951_0000095
237 Ga0373942_0000014
238 Ga0373962_0002717
239 Ga0373935_0152687
240 Ga0395901_0093112
241 Ga0451789_0522790
242 Ga0451791_0682830
243 Ga0451791_0826479
244 Ga0451793_0610369
245 Ga0451793_0772932
246 Ga0451797_0901465
247 Ga0451802_0165044
248 Ga0451837_0758893
249 Ga0451849_0330070
250 Ga0451843_1674780
251 Ga0466965_0028963
252 Ga0466971_0043392
253 Ga0466957_0267779
254 Ga0466960_0024778
255 Ga0466959_0217662
256 Ga0466967_0013909
257 Ga0466967_0133459
258 Ga0495629_0057104
259 Ga0495653_0038169
260 Ga0495653_0068223
261 Ga0495608_0249319
262 Ga0495632_0071133
263 Ga0495665_0098486
264 Ga0495634_0134362
265 Ga0495657_0176351
266 Ga0495658_0294727
267 Ga0495671_0084532
268 Ga0495581_0092468
269 Ga0495674_0160572
270 Ga0496100_0058261
271 Ga0496100_0245064
272 Ga0496102_0019036
273 Ga0496102_0021446
274 Ga0496102_0062754
275 Ga0496104_0001758
276 Ga0496104_0447116
277 Ga0496105_0000734
278 Ga0496108_0000435
279 Ga0496108_0035232
280 Ga0496108_0080957
281 Ga0496108_0168771
282 Ga0496109_0001794
283 Ga0496109_0224517
284 Ga0496112_0123807
285 Ga0496113_0109148
286 Ga0496114_0027303
287 Ga0496114_0259405
288 Ga0501033_0102433
289 Ga0495595_0032182
290 Ga0500573_0116198
291 Ga0500579_034448
292 2729907720
293 2753264164
294 2857731020
295 2928122418
296 2939658762

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

50

306

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cny-assembly2.cif.gz_B crystal structure of a putative inositol catabolism protein iole (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a resolution 0.8284 21 282
3lmz-assembly1.cif.gz_A-2 crystal structure of putative sugar isomerase. (yp_001305105.1) from parabacteroides distasonis atcc 8503 at 1.44 a resolution 0.8112 20 279
2zds-assembly1.cif.gz_F crystal structure of sco6571 from streptomyces coelicolor a3(2) 0.7774 19 279
3p6l-assembly1.cif.gz_A crystal structure of a sugar phosphate isomerase/epimerase (bdi_1903) from parabacteroides distasonis atcc 8503 at 1.85 a resolution 0.7637 19 280
3cny-assembly2.cif.gz_B crystal structure of a putative inositol catabolism protein iole (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a resolution 0.7596 21 282
ID Description Score Start End Superfamily
3cnyA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.8176 21 282 3.20.20.150
2zdsA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.7721 19 279 3.20.20.150
af_Q8IKT3_95_229_3.30.420.80 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribosomal protein S11/S14 0.7673 72 143 3.30.420.80
3cnyA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.745 21 282 3.20.20.150
3p6lA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.7443 19 280 3.20.20.150
ID Description Score Start End GO Terms
AF-U5VXF0-F1-model_v4 Xylose isomerase-like TIM barrel domain-containing protein 0.9939 6 282
AF-R4LX92-F1-model_v4 Xylose isomerase-like TIM barrel domain-containing protein 0.9925 6 279
AF-A0A6J4L2L2-F1-model_v4 Inosose dehydratase (EC 4.2.1.44) 0.9673 161 283 GO:0050114
AF-A0A6N7EL89-F1-model_v4 TIM barrel protein 0.9671 8 282
AF-A0A7W5JU94-F1-model_v4 Inosose dehydratase (EC 4.2.1.44) 0.9653 7 280 GO:0050114

Map