F201451
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 147 | 119 | 294 | 377 |
Family's Representative Sequence
| Representative Sequence | 3300048913|Ga0496110_0151455|Ga0496110_0151455_735_2030 |
| Length | 431 |
| Sequence | VSRRKQILVRPAETHDAQLTHGLQSGLRQAAKIETSVNQRRSVKKTASTTSAEKPQPVPMLDLGRQYAAIRDEILAAIERVCSSQKFILGEEVEALESELAAFTGAQHAVGCASGTDALWLALAATGVQPGDEVVTTSFSFFASASAIVRAGARPIFVDIEPETLNIDPGQVEQALRSRRSIRALLPVHLYGQCTNMDSIEQLADEFKLVVIEDAAQAIGAAWREQSAGTMGAAAAFSFYPTKNLSAYGDAGLVTTNDSDVAEHVRRLRNHGSPKRYYHEEVGWNSRLDTIQAAVLRVKLPHVSEWNNMRGERAATYDRLLNDAGLTSGTGVSPVQPLFRSPHARHVFHQYVVRARQRDELRAFLAERGVGTEVYYPVPLHLQNCFSSLGYQEGDLPESERAAREVLALPMFPELTEDEQRWVVECIASFY |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 2 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 3 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 4 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 5 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 6 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 8 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 19 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 23 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 24 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 25 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 28 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 29 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 30 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 31 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 32 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 33 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 34 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 47 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 48 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 49 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 50 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 51 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 52 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 53 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 54 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 55 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 56 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 57 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 58 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 59 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 60 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 61 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 62 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 63 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 64 | 3300042013 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 | Metagenome | Rhizosphere |
| 65 | 3300042016 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 | Metagenome | Rhizosphere |
| 66 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 67 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 68 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 77 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 78 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 80 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 81 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 82 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 83 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 84 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 85 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 86 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 87 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 88 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 89 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 90 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 91 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 92 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 93 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 94 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 95 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 96 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 97 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 98 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 99 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 100 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 101 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 102 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 103 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 104 | 2511231006 | Pseudomonas sp. GM17 | Isolate | Nodule |
| 105 | 2512047018 | Pseudomonas chlororaphis chlororaphis GP72 | Isolate | Rhizosphere |
| 106 | 2582580891 | Pseudomonas chlororaphis YL-1 | Isolate | Unclassified |
| 107 | 2597489887 | Pseudomonas chlororaphis aureofaciens 30-84 | Isolate | Rhizosphere |
| 108 | 2599185185 | Pseudomonas sp. NFPP07 | Isolate | Rhizoplane |
| 109 | 2599185257 | Pseudomonas sp. NFACC41-3 | Isolate | Rhizoplane |
| 110 | 2600254931 | Pseudomonas sp. NFIX28 | Isolate | Rhizoplane |
| 111 | 2643221560 | Sphingopyxis sp. Root1497 | Isolate | Unclassified |
| 112 | 2643221633 | Pseudomonas sp. Root329 | Isolate | Unclassified |
| 113 | 2671180172 | Pseudomonas sp. NFIX51 | Isolate | Rhizoplane |
| 114 | 2740892503 | Pseudomonas chlororaphis piscium PCL1391 | Isolate | Unclassified |
| 115 | 2923153595 | Pseudomonas chlororaphis piscium PCL1391 | Isolate | Unclassified |
| 116 | 2984286254 | Pseudomonas chlororaphis aurantiaca JD37 | Isolate | Rhizosphere |
| 117 | 8015687852 | Pseudomonas chlororaphis aurantiaca RP4 | Isolate | Rhizosphere |
| 118 | 8055770955 | Pseudomonas chlororaphis qlu-1 | Isolate | Rhizosphere |
| 119 | 8056447290 | Streptomyces huiliensis SCA2-4 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 89.12 |
| Metatranscriptomes | 0 |
| Isolates | 10.88 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.76 |
| Nodule | 0.68 |
| Rhizoplane | 4.76 |
| Rhizosphere | 85.71 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 5.44 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0496110_0151455 | 3300048913 | Unclassified | 2100 |
| 2 | Ga0055536_1000605 | 3300003781 | Bacteria | 24438 |
| 3 | Ga0055530_10000930 | 3300003791 | Bacteria | 24004 |
| 4 | Ga0055540_1000666 | 3300003792 | Bacteria | 23992 |
| 5 | Ga0065704_10073067 | 3300005289 | Bacteria | 7619 |
| 6 | Ga0070670_100140319 | 3300005331 | Bacteria | 2090 |
| 7 | Ga0070680_100046950 | 3300005336 | Bacteria | 3515 |
| 8 | Ga0070709_10049201 | 3300005434 | Bacteria | 2634 |
| 9 | Ga0070709_10069987 | 3300005434 | Unclassified | 2261 |
| 10 | Ga0070713_100322717 | 3300005436 | Unclassified | 1426 |
| 11 | Ga0070711_100037873 | 3300005439 | Bacteria | 3238 |
| 12 | Ga0070711_100114481 | 3300005439 | Bacteria | 1985 |
| 13 | Ga0070700_100017250 | 3300005441 | Bacteria | 4124 |
| 14 | Ga0070700_100019170 | 3300005441 | Bacteria | 3945 |
| 15 | Ga0070708_100064254 | 3300005445 | Bacteria | 3288 |
| 16 | Ga0070708_100122384 | 3300005445 | Bacteria | 2401 |
| 17 | Ga0070706_100000381 | 3300005467 | Bacteria | 53192 |
| 18 | Ga0070707_100004649 | 3300005468 | Bacteria | 12853 |
| 19 | Ga0070698_100000015 | 3300005471 | Bacteria | 111813 |
| 20 | Ga0070699_100036481 | 3300005518 | Unclassified | 4253 |
| 21 | Ga0070697_100000195 | 3300005536 | Bacteria | 49351 |
| 22 | Ga0070697_100008506 | 3300005536 | Bacteria | 8008 |
| 23 | Ga0070697_100023162 | 3300005536 | Bacteria | 4938 |
| 24 | Ga0070697_100084356 | 3300005536 | Bacteria | 2620 |
| 25 | Ga0070697_100099550 | 3300005536 | Bacteria | 2413 |
| 26 | Ga0068858_100228863 | 3300005842 | Bacteria | 1762 |
| 27 | Ga0070715_10000359 | 3300006163 | Bacteria | 11373 |
| 28 | Ga0070716_100001413 | 3300006173 | Bacteria | 10654 |
| 29 | Ga0070716_100063656 | 3300006173 | Unclassified | 2142 |
| 30 | Ga0070712_100010562 | 3300006175 | Bacteria | 5829 |
| 31 | Ga0070712_100017231 | 3300006175 | Bacteria | 4674 |
| 32 | Ga0075428_100003652 | 3300006844 | Bacteria | 16868 |
| 33 | Ga0075428_100016527 | 3300006844 | Bacteria | 8149 |
| 34 | Ga0075431_100007711 | 3300006847 | Bacteria | 10719 |
| 35 | Ga0075431_100314570 | 3300006847 | Bacteria | 1580 |
| 36 | Ga0099794_10004077 | 3300007265 | Bacteria | 5685 |
| 37 | Ga0111539_10265660 | 3300009094 | Bacteria | 1997 |
| 38 | Ga0114129_10081320 | 3300009147 | Bacteria | 4503 |
| 39 | Ga0182008_10111804 | 3300014497 | Bacteria | 1354 |
| 40 | Ga0182007_10055344 | 3300015262 | Bacteria | 1304 |
| 41 | Ga0182005_1006442 | 3300015265 | Unclassified | 3588 |
| 42 | Ga0209676_1000006 | 3300025292 | Bacteria | 1039588 |
| 43 | Ga0209050_1000070 | 3300025298 | Bacteria | 296366 |
| 44 | Ga0209051_1000086 | 3300025303 | Bacteria | 183550 |
| 45 | Ga0209257_1023302 | 3300025304 | Bacteria | 2180 |
| 46 | Ga0207685_10000229 | 3300025905 | Bacteria | 8688 |
| 47 | Ga0207699_10042315 | 3300025906 | Bacteria | 2638 |
| 48 | Ga0207684_10002834 | 3300025910 | Bacteria | 17222 |
| 49 | Ga0207684_10151058 | 3300025910 | Bacteria | 1998 |
| 50 | Ga0207693_10022763 | 3300025915 | Bacteria | 4975 |
| 51 | Ga0207663_10014180 | 3300025916 | Bacteria | 4356 |
| 52 | Ga0207657_10014461 | 3300025919 | Bacteria | 7704 |
| 53 | Ga0207646_10003480 | 3300025922 | Bacteria | 17771 |
| 54 | Ga0207664_10009476 | 3300025929 | Bacteria | 6836 |
| 55 | Ga0207665_10000091 | 3300025939 | Bacteria | 58755 |
| 56 | Ga0207708_10043932 | 3300026075 | Bacteria | 3405 |
| 57 | Ga0207708_10082670 | 3300026075 | Bacteria | 2469 |
| 58 | Ga0209588_1016077 | 3300027671 | Bacteria | 2305 |
| 59 | Ga0268266_10214491 | 3300028379 | Bacteria | 1767 |
| 60 | Ga0265338_10030450 | 3300028800 | Bacteria | 5316 |
| 61 | Ga0265330_10008048 | 3300031235 | Bacteria | 5101 |
| 62 | Ga0265340_10039513 | 3300031247 | Unclassified | 2328 |
| 63 | Ga0265339_10068459 | 3300031249 | Bacteria | 1897 |
| 64 | Ga0307509_10000030 | 3300031507 | Bacteria | 206541 |
| 65 | Ga0316576_10011558 | 3300031727 | Bacteria | 5792 |
| 66 | Ga0316576_10015889 | 3300031727 | Bacteria | 5066 |
| 67 | Ga0316578_10003791 | 3300031728 | Bacteria | 6996 |
| 68 | Ga0307405_10102149 | 3300031731 | Bacteria | 1925 |
| 69 | Ga0316577_10002986 | 3300031733 | Bacteria | 8465 |
| 70 | Ga0307410_10088123 | 3300031852 | Bacteria | 2197 |
| 71 | Ga0307411_10034015 | 3300032005 | Bacteria | 3167 |
| 72 | Ga0307415_100020064 | 3300032126 | Bacteria | 4072 |
| 73 | Ga0316583_10004880 | 3300032133 | Bacteria | 4791 |
| 74 | Ga0373943_0095661 | 3300035170 | Bacteria | 1545 |
| 75 | Ga0316574_0002281 | 3300035398 | Bacteria | 9553 |
| 76 | Ga0316574_0052839 | 3300035398 | Bacteria | 2535 |
| 77 | Ga0316584_0017129 | 3300036712 | Bacteria | 5204 |
| 78 | Ga0316584_0027296 | 3300036712 | Bacteria | 4202 |
| 79 | Ga0436361_1149213 | 3300039447 | Bacteria | 56244 |
| 80 | Ga0439466_0000231 | 3300041411 | Bacteria | 22092 |
| 81 | Ga0439456_001574 | 3300042013 | Bacteria | 4602 |
| 82 | Ga0439463_000124 | 3300042016 | Bacteria | 19185 |
| 83 | Ga0453684_0004578 | 3300044712 | Bacteria | 28862 |
| 84 | Ga0451576_0364195 | 3300045051 | Bacteria | 1514 |
| 85 | Ga0495580_0004030 | 3300046472 | Bacteria | 12396 |
| 86 | Ga0495580_0015518 | 3300046472 | Bacteria | 5743 |
| 87 | Ga0495580_0025154 | 3300046472 | Bacteria | 4351 |
| 88 | Ga0495608_0014705 | 3300046511 | Bacteria | 5431 |
| 89 | Ga0495628_0001805 | 3300046516 | Bacteria | 19435 |
| 90 | Ga0495665_0052647 | 3300046531 | Bacteria | 2155 |
| 91 | Ga0495667_0002385 | 3300046559 | Bacteria | 12561 |
| 92 | Ga0495634_0174956 | 3300046642 | Bacteria | 1347 |
| 93 | Ga0495673_0002215 | 3300047469 | Bacteria | 13991 |
| 94 | Ga0495684_0003176 | 3300047471 | Bacteria | 12886 |
| 95 | Ga0496103_0118349 | 3300048906 | Bacteria | 1687 |
| 96 | Ga0496111_0080762 | 3300048914 | Bacteria | 2373 |
| 97 | Ga0495682_0000925 | 3300049460 | Bacteria | 17821 |
| 98 | Ga0501031_0000660 | 3300049568 | Bacteria | 20474 |
| 99 | Ga0501031_0020186 | 3300049568 | Bacteria | 4343 |
| 100 | Ga0501032_0018392 | 3300049569 | Unclassified | 4897 |
| 101 | Ga0501036_0012530 | 3300049572 | Bacteria | 7032 |
| 102 | Ga0501036_0114223 | 3300049572 | Bacteria | 2282 |
| 103 | Ga0501037_0005533 | 3300049573 | Bacteria | 9218 |
| 104 | Ga0501037_0015241 | 3300049573 | Bacteria | 5655 |
| 105 | Ga0501038_0120042 | 3300049574 | Bacteria | 2169 |
| 106 | Ga0501039_0000240 | 3300049575 | Bacteria | 39869 |
| 107 | Ga0501039_0002094 | 3300049575 | Bacteria | 14786 |
| 108 | Ga0501040_0115641 | 3300049576 | Bacteria | 1878 |
| 109 | Ga0501041_0050997 | 3300049577 | Bacteria | 2521 |
| 110 | Ga0501042_0001725 | 3300049578 | Bacteria | 13073 |
| 111 | Ga0501043_0122558 | 3300049579 | Bacteria | 2039 |
| 112 | Ga0501046_0002880 | 3300049580 | Bacteria | 15944 |
| 113 | Ga0501046_0003397 | 3300049580 | Bacteria | 14608 |
| 114 | Ga0501048_0000369 | 3300049582 | Bacteria | 31172 |
| 115 | Ga0501048_0143602 | 3300049582 | Bacteria | 1688 |
| 116 | Ga0501071_0021011 | 3300049587 | Bacteria | 4544 |
| 117 | Ga0501072_0266128 | 3300049588 | Bacteria | 1364 |
| 118 | Ga0501073_0102324 | 3300049589 | Bacteria | 1989 |
| 119 | Ga0501076_0007198 | 3300049592 | Bacteria | 8091 |
| 120 | Ga0501076_0062393 | 3300049592 | Bacteria | 2968 |
| 121 | Ga0501079_0056668 | 3300049741 | Bacteria | 3024 |
| 122 | Ga0501079_0259617 | 3300049741 | Bacteria | 1358 |
| 123 | Ga0501081_0192540 | 3300049743 | Bacteria | 1477 |
| 124 | Ga0501035_0298634 | 3300049822 | Bacteria | 1357 |
| 125 | Ga0501045_0128647 | 3300049824 | Bacteria | 1882 |
| 126 | nmdc:mga05p37_55645_c1 | 3300050507 | Bacteria | 3938 |
| 127 | nmdc:mga09592_8393_c1 | 3300050508 | Bacteria | 8396 |
| 128 | nmdc:mga0qj67_136156_c1 | 3300050509 | Bacteria | 1990 |
| 129 | nmdc:mga06r32_36178_c1 | 3300050510 | Bacteria | 4663 |
| 130 | nmdc:mga08y16_172658_c1 | 3300050511 | Bacteria | 2245 |
| 131 | nmdc:mga08y16_210430_c1 | 3300050511 | Bacteria | 2014 |
| 132 | 2511263454 | 2511231006 | Bacteria | 6794709 |
| 133 | 2512328527 | 2512047018 | Bacteria | 6663241 |
| 134 | 2583793970 | 2582580891 | Bacteria | 6800976 |
| 135 | 2597859594 | 2597489887 | Bacteria | 6666321 |
| 136 | 2599482424 | 2599185185 | Bacteria | 6652270 |
| 137 | 2599803856 | 2599185257 | Bacteria | 6492581 |
| 138 | 2600364496 | 2600254931 | Bacteria | 6734225 |
| 139 | 2643823430 | 2643221560 | Bacteria | 4801179 |
| 140 | 2644188347 | 2643221633 | Bacteria | 6733554 |
| 141 | 2671770575 | 2671180172 | Bacteria | 6495783 |
| 142 | 2743739123 | 2740892503 | Bacteria | 6855563 |
| 143 | 2923158205 | 2923153595 | Bacteria | 6870622 |
| 144 | 2984287970 | 2984286254 | Bacteria | 6702062 |
| 145 | 8015692302 | 8015687852 | Bacteria | 6613826 |
| 146 | 8055775511 | 8055770955 | Bacteria | 6827675 |
| 147 | 8056454159 | 8056447290 | Bacteria | 7680491 |
| 148 | Ga0496110_0151455 | |||
| 149 | Ga0055536_1000605 | |||
| 150 | Ga0055530_10000930 | |||
| 151 | Ga0055540_1000666 | |||
| 152 | Ga0065704_10073067 | |||
| 153 | Ga0070670_100140319 | |||
| 154 | Ga0070680_100046950 | |||
| 155 | Ga0070709_10049201 | |||
| 156 | Ga0070709_10069987 | |||
| 157 | Ga0070713_100322717 | |||
| 158 | Ga0070711_100037873 | |||
| 159 | Ga0070711_100114481 | |||
| 160 | Ga0070700_100017250 | |||
| 161 | Ga0070700_100019170 | |||
| 162 | Ga0070708_100064254 | |||
| 163 | Ga0070708_100122384 | |||
| 164 | Ga0070706_100000381 | |||
| 165 | Ga0070707_100004649 | |||
| 166 | Ga0070698_100000015 | |||
| 167 | Ga0070699_100036481 | |||
| 168 | Ga0070697_100000195 | |||
| 169 | Ga0070697_100008506 | |||
| 170 | Ga0070697_100023162 | |||
| 171 | Ga0070697_100084356 | |||
| 172 | Ga0070697_100099550 | |||
| 173 | Ga0068858_100228863 | |||
| 174 | Ga0070715_10000359 | |||
| 175 | Ga0070716_100001413 | |||
| 176 | Ga0070716_100063656 | |||
| 177 | Ga0070712_100010562 | |||
| 178 | Ga0070712_100017231 | |||
| 179 | Ga0075428_100003652 | |||
| 180 | Ga0075428_100016527 | |||
| 181 | Ga0075431_100007711 | |||
| 182 | Ga0075431_100314570 | |||
| 183 | Ga0099794_10004077 | |||
| 184 | Ga0111539_10265660 | |||
| 185 | Ga0114129_10081320 | |||
| 186 | Ga0182008_10111804 | |||
| 187 | Ga0182007_10055344 | |||
| 188 | Ga0182005_1006442 | |||
| 189 | Ga0209676_1000006 | |||
| 190 | Ga0209050_1000070 | |||
| 191 | Ga0209051_1000086 | |||
| 192 | Ga0209257_1023302 | |||
| 193 | Ga0207685_10000229 | |||
| 194 | Ga0207699_10042315 | |||
| 195 | Ga0207684_10002834 | |||
| 196 | Ga0207684_10151058 | |||
| 197 | Ga0207693_10022763 | |||
| 198 | Ga0207663_10014180 | |||
| 199 | Ga0207657_10014461 | |||
| 200 | Ga0207646_10003480 | |||
| 201 | Ga0207664_10009476 | |||
| 202 | Ga0207665_10000091 | |||
| 203 | Ga0207708_10043932 | |||
| 204 | Ga0207708_10082670 | |||
| 205 | Ga0209588_1016077 | |||
| 206 | Ga0268266_10214491 | |||
| 207 | Ga0265338_10030450 | |||
| 208 | Ga0265330_10008048 | |||
| 209 | Ga0265340_10039513 | |||
| 210 | Ga0265339_10068459 | |||
| 211 | Ga0307509_10000030 | |||
| 212 | Ga0316576_10011558 | |||
| 213 | Ga0316576_10015889 | |||
| 214 | Ga0316578_10003791 | |||
| 215 | Ga0307405_10102149 | |||
| 216 | Ga0316577_10002986 | |||
| 217 | Ga0307410_10088123 | |||
| 218 | Ga0307411_10034015 | |||
| 219 | Ga0307415_100020064 | |||
| 220 | Ga0316583_10004880 | |||
| 221 | Ga0373943_0095661 | |||
| 222 | Ga0316574_0002281 | |||
| 223 | Ga0316574_0052839 | |||
| 224 | Ga0316584_0017129 | |||
| 225 | Ga0316584_0027296 | |||
| 226 | Ga0436361_1149213 | |||
| 227 | Ga0439466_0000231 | |||
| 228 | Ga0439456_001574 | |||
| 229 | Ga0439463_000124 | |||
| 230 | Ga0453684_0004578 | |||
| 231 | Ga0451576_0364195 | |||
| 232 | Ga0495580_0004030 | |||
| 233 | Ga0495580_0015518 | |||
| 234 | Ga0495580_0025154 | |||
| 235 | Ga0495608_0014705 | |||
| 236 | Ga0495628_0001805 | |||
| 237 | Ga0495665_0052647 | |||
| 238 | Ga0495667_0002385 | |||
| 239 | Ga0495634_0174956 | |||
| 240 | Ga0495673_0002215 | |||
| 241 | Ga0495684_0003176 | |||
| 242 | Ga0496103_0118349 | |||
| 243 | Ga0496111_0080762 | |||
| 244 | Ga0495682_0000925 | |||
| 245 | Ga0501031_0000660 | |||
| 246 | Ga0501031_0020186 | |||
| 247 | Ga0501032_0018392 | |||
| 248 | Ga0501036_0012530 | |||
| 249 | Ga0501036_0114223 | |||
| 250 | Ga0501037_0005533 | |||
| 251 | Ga0501037_0015241 | |||
| 252 | Ga0501038_0120042 | |||
| 253 | Ga0501039_0000240 | |||
| 254 | Ga0501039_0002094 | |||
| 255 | Ga0501040_0115641 | |||
| 256 | Ga0501041_0050997 | |||
| 257 | Ga0501042_0001725 | |||
| 258 | Ga0501043_0122558 | |||
| 259 | Ga0501046_0002880 | |||
| 260 | Ga0501046_0003397 | |||
| 261 | Ga0501048_0000369 | |||
| 262 | Ga0501048_0143602 | |||
| 263 | Ga0501071_0021011 | |||
| 264 | Ga0501072_0266128 | |||
| 265 | Ga0501073_0102324 | |||
| 266 | Ga0501076_0007198 | |||
| 267 | Ga0501076_0062393 | |||
| 268 | Ga0501079_0056668 | |||
| 269 | Ga0501079_0259617 | |||
| 270 | Ga0501081_0192540 | |||
| 271 | Ga0501035_0298634 | |||
| 272 | Ga0501045_0128647 | |||
| 273 | nmdc:mga05p37_55645_c1 | |||
| 274 | nmdc:mga09592_8393_c1 | |||
| 275 | nmdc:mga0qj67_136156_c1 | |||
| 276 | nmdc:mga06r32_36178_c1 | |||
| 277 | nmdc:mga08y16_172658_c1 | |||
| 278 | nmdc:mga08y16_210430_c1 | |||
| 279 | 2511263454 | |||
| 280 | 2512328527 | |||
| 281 | 2583793970 | |||
| 282 | 2597859594 | |||
| 283 | 2599482424 | |||
| 284 | 2599803856 | |||
| 285 | 2600364496 | |||
| 286 | 2643823430 | |||
| 287 | 2644188347 | |||
| 288 | 2671770575 | |||
| 289 | 2743739123 | |||
| 290 | 2923158205 | |||
| 291 | 2984287970 | |||
| 292 | 8015692302 | |||
| 293 | 8055775511 | |||
| 294 | 8056454159 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5u1z-assembly2.cif.gz_C | x-ray structure of the wlarg aminotransferase, apo form, from campylobacter jejune | 0.9705 | 7 | 370 |
| 7n63-assembly1.cif.gz_A-2 | x-ray structure of hcan_0200, an aminotransferase from helicobacter canadensis in complex with its external aldimine | 0.9704 | 7 | 371 |
| 5u24-assembly2.cif.gz_D | x-ray structure of the wlarg aminotransferase from campylobacter jejuni, k184a mutant in complex with tdp-fuc3n | 0.9703 | 7 | 372 |
| 7b0d-assembly1.cif.gz_B | sugar transaminase from archaeoglobus veneficus | 0.9663 | 5 | 369 |
| 7n63-assembly1.cif.gz_A-2 | x-ray structure of hcan_0200, an aminotransferase from helicobacter canadensis in complex with its external aldimine | 0.9651 | 7 | 371 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5u1zA01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9889 | 7 | 252 | 3.40.640.10 |
| 2ogeD01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.982 | 5 | 253 | 3.40.640.10 |
| 2ogeD01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9779 | 5 | 253 | 3.40.640.10 |
| 5u1zA01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9766 | 7 | 252 | 3.40.640.10 |
| af_L0T6V0_4_199_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9765 | 38 | 209 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A0E9LUI0-F1-model_v4 | Aminotransferase | 0.9904 | 5 | 194 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-A0A0F9QKC3-F1-model_v4 | Aminotransferase class I/classII domain-containing protein | 0.9895 | 8 | 142 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-A0A3D4E1S7-F1-model_v4 | deleted | 0.9854 | 81 | 194 |
|
| AF-A0A7C1NRK7-F1-model_v4 | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.9846 | 7 | 243 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-A0A3B1BRP2-F1-model_v4 | Glutamate--UDP-2-acetamido-2-deoxy-D-ribohex-3-uluronic acid aminotransferase (PLP cofactor) (EC 2.6.1.98) | 0.9826 | 5 | 330 |
GO:0000271
GO:0008483 GO:0030170 |