F198405

General Info

Members Datasets Scaffolds Average Seq Length
146 126 133 327

Family's Representative Sequence

Representative Sequence 3300046457|Ga0495590_0031475|Ga0495590_0031475_345_1514
Length 389
Sequence MPRPWRILRQGLSSDVSLAYACFSFSIVSWRAKVAGLCRPFFHGQAQLLGVPYYGILGGSCDREPMPMRCFAAIDRSGTAFDGMLRIPGGTFRMGSDKHYPEEAPAHHVTVDEFLIDRTPVTNRQFKEFVRATGHVTFAEIPPDPKDYPGALPHMLYAGSLVFSPPSRVVDLRDWSQWWHFMKGADWRHPYGPKSNLNVLDNHPVVHVAYSDALAYAQWAGKDLPTEAEWEFAARGGLSEAEYAWGDEFTPGGQHHANTWQGEFPKQNLCTDGFDRTSPVTAFAPNGYGVYDMIGNVWEWTSDWYSQKHEADAPKACCIPQNPRGGREEGSFDPAQPQIRIPRRVLKGGSHLCAPNYCRRYRPAARHAEAVDTSTSHVGFRCVIRARTS

Samples

Sample ID Description Type Environment
1 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
2 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
3 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
4 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
5 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
6 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
7 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
8 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
13 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
16 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
22 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
23 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
24 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
25 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
33 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
34 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
35 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
36 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
37 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
38 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
39 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
40 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
41 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
42 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
43 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
44 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
45 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
46 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
47 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
48 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
49 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
50 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
51 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
52 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
53 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
55 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
58 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
59 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
60 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
61 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
62 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
63 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
64 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
65 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
66 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
67 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
68 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
69 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
70 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
71 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
72 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
73 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
74 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
75 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
76 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
77 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
78 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
81 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
82 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
83 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
84 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
85 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
86 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
87 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
88 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
89 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
90 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
91 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
92 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
93 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
94 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
95 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
96 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
97 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
101 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
102 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
103 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
104 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
105 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
106 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
107 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
108 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
109 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
110 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
111 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
112 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
113 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
114 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
115 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
116 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
117 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
118 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
119 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
120 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
121 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
122 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
123 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
124 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
125 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
126 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.41
Metatranscriptomes 0.68
Isolates 8.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.18
Nodule 6.85
Rhizoplane 0
Rhizosphere 66.44
Stem 0
Stem Tuber 0
Unclassified 7.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1010101 3300000549 Bacteria 1132
2 Ga0070667_100039461 3300005367 Bacteria 3958
3 Ga0070714_100084185 3300005435 Bacteria 2775
4 Ga0070699_100107873 3300005518 Bacteria 2443
5 Ga0070717_10017148 3300006028 Bacteria 5627
6 Ga0070717_10124618 3300006028 Bacteria 2211
7 Ga0075365_10009670 3300006038 Bacteria 5565
8 Ga0075363_100017728 3300006048 Bacteria 3536
9 Ga0075367_10012957 3300006178 Bacteria 4467
10 Ga0075367_10029305 3300006178 Bacteria 3147
11 Ga0075367_10060676 3300006178 Bacteria 2255
12 Ga0075367_10118634 3300006178 Bacteria 1629
13 Ga0075369_10024699 3300006186 Bacteria 2493
14 Ga0075428_100404188 3300006844 Bacteria 1463
15 Ga0099795_10036703 3300007788 Bacteria 1721
16 Ga0111539_10000096 3300009094 Bacteria 92188
17 Ga0114129_10256195 3300009147 Bacteria 2347
18 Ga0157380_10237036 3300014326 Bacteria 1642
19 Ga0157377_10189159 3300014745 Bacteria 1300
20 Ga0163161_10210030 3300017792 Bacteria 1504
21 Ga0228598_1019949 3300024227 Bacteria 1321
22 Ga0207700_10002139 3300025928 Bacteria 11305
23 Ga0207664_10098363 3300025929 Bacteria 2412
24 Ga0207706_10081852 3300025933 Bacteria 2837
25 Ga0207689_10033601 3300025942 Bacteria 4261
26 Ga0207648_10187620 3300026089 Bacteria 1831
27 Ga0207675_100190775 3300026118 Bacteria 1966
28 Ga0207683_10325997 3300026121 Bacteria 1407
29 Ga0207428_10000120 3300027907 Bacteria 106231
30 Ga0265763_1000899 3300030763 Bacteria 1986
31 Ga0265316_10249161 3300031344 Bacteria 1305
32 Ga0307509_10018412 3300031507 Bacteria 8008
33 Ga0307509_10130317 3300031507 Bacteria 2472
34 Ga0307508_10083305 3300031616 Bacteria 2780
35 Ga0307516_10002210 3300031730 Bacteria 26352
36 Ga0307516_10124666 3300031730 Bacteria 2362
37 Ga0307415_100056759 3300032126 Bacteria 2687
38 Ga0307510_10053901 3300033180 Bacteria 4220
39 Ga0307510_10230776 3300033180 Bacteria 1354
40 Ga0373926_0009211 3300035083 Bacteria 3296
41 Ga0373944_0000875 3300035089 Bacteria 7423
42 Ga0373923_0000459 3300035111 Bacteria 9691
43 Ga0373936_0013465 3300035113 Bacteria 3121
44 Ga0373954_0003279 3300035118 Bacteria 6832
45 Ga0373957_0048662 3300035120 Bacteria 1616
46 Ga0373943_0000459 3300035170 Bacteria 17295
47 Ga0373946_0001631 3300035171 Bacteria 7824
48 Ga0373946_0013095 3300035171 Bacteria 3112
49 Ga0373924_0002062 3300035410 Bacteria 6706
50 Ga0373935_0000556 3300035692 Bacteria 19410
51 Ga0373927_0001108 3300035695 Bacteria 20449
52 Ga0373927_0001508 3300035695 Bacteria 17535
53 Ga0373933_0020521 3300035724 Bacteria 3746
54 Ga0373947_0003947 3300035725 Bacteria 8720
55 Ga0373937_0004798 3300036401 Bacteria 11485
56 Ga0373925_0002823 3300037068 Bacteria 13701
57 Ga0373925_0004131 3300037068 Bacteria 11016
58 Ga0373925_0151677 3300037068 Bacteria 1820
59 Ga0395899_0007298 3300037312 Bacteria 8549
60 Ga0395900_0100396 3300037418 Bacteria 2973
61 Ga0395901_0003753 3300038443 Bacteria 15301
62 Ga0495592_0028691 3300046454 Bacteria 4212
63 Ga0495590_0031475 3300046457 Bacteria 1858
64 Ga0495638_0021624 3300046460 Bacteria 4236
65 Ga0495580_0004809 3300046472 Bacteria 11308
66 Ga0495582_0025427 3300046473 Bacteria 3243
67 Ga0495639_0139617 3300046475 Bacteria 1164
68 Ga0495664_0000425 3300046477 Bacteria 20678
69 Ga0495584_0052292 3300046491 Bacteria 2056
70 Ga0495608_0042772 3300046511 Bacteria 3029
71 Ga0495618_0047666 3300046514 Bacteria 2705
72 Ga0495628_0035072 3300046516 Bacteria 4034
73 Ga0495630_0002059 3300046517 Bacteria 13986
74 Ga0495631_0028795 3300046518 Bacteria 2532
75 Ga0495666_0108368 3300046526 Bacteria 1306
76 Ga0495652_0014422 3300046529 Bacteria 7095
77 Ga0495665_0006079 3300046531 Bacteria 6514
78 Ga0495665_0016431 3300046531 Bacteria 3988
79 Ga0495640_0106566 3300046533 Bacteria 1835
80 Ga0495586_0063028 3300046535 Bacteria 2019
81 Ga0495609_0056854 3300046538 Bacteria 1733
82 Ga0495645_0040273 3300046543 Bacteria 3409
83 Ga0495622_0088548 3300046557 Bacteria 1423
84 Ga0495634_0002662 3300046642 Bacteria 14687
85 Ga0495659_0025927 3300046664 Bacteria 2010
86 Ga0495588_0035353 3300046674 Bacteria 2531
87 Ga0495623_0045064 3300046679 Bacteria 2802
88 Ga0495646_0016995 3300046680 Bacteria 4620
89 Ga0495647_0037699 3300046681 Bacteria 1826
90 Ga0495658_0027490 3300046683 Bacteria 3062
91 Ga0495624_0019231 3300046690 Bacteria 4563
92 Ga0495670_0048743 3300046691 Bacteria 2119
93 Ga0495581_0031869 3300047315 Bacteria 3054
94 Ga0495674_0002976 3300047319 Bacteria 16489
95 Ga0495674_0140050 3300047319 Bacteria 2034
96 Ga0495676_0055820 3300047321 Bacteria 3129
97 Ga0495683_0013970 3300047323 Bacteria 4185
98 Ga0495673_0039615 3300047469 Bacteria 2136
99 Ga0495684_0039139 3300047471 Bacteria 3635
100 Ga0495593_0029942 3300047673 Bacteria 2982
101 Ga0495593_0080662 3300047673 Bacteria 1683
102 Ga0495615_0009772 3300048090 Bacteria 1898
103 Ga0496124_0008672 3300048927 Bacteria 10581
104 Ga0495682_0083701 3300049460 Bacteria 1147
105 Ga0501034_0457335 3300049571 Bacteria 1194
106 Ga0501036_0036100 3300049572 Bacteria 4181
107 Ga0501073_0030406 3300049589 Bacteria 3856
108 Ga0501076_0372296 3300049592 Bacteria 1174
109 nmdc:mga03683_9869_c1 3300050489 Bacteria 1332
110 nmdc:mga0yw44_241142_c1 3300050492 Bacteria 1201
111 nmdc:mga0yw44_4960_c1 3300050492 Bacteria 4371
112 nmdc:mga06z11_13319_c2 3300050494 Bacteria 1496
113 nmdc:mga06z11_14527_c1 3300050494 Bacteria 3490
114 nmdc:mga05p37_167391_c1 3300050507 Bacteria 2682
115 nmdc:mga08y16_96_c1 3300050511 Bacteria 74719
116 nmdc:mga0sz30_6867_c1 3300050516 Bacteria 4249
117 Ga0495612_0010051 3300053078 Bacteria 3828
118 Ga0500635_0006245 3300053080 Bacteria 3172
119 Ga0495619_0009778 3300053085 Bacteria 6048
120 Ga0500644_0015521 3300053088 Bacteria 2175
121 Ga0500647_0011468 3300053091 Bacteria 3959
122 Ga0500651_0001967 3300053093 Bacteria 10648
123 Ga0500554_000362 3300053102 Bacteria 9802
124 Ga0500595_006139 3300053119 Bacteria 5143
125 Ga0500595_015415 3300053119 Bacteria 2870
126 Ga0500607_156781 3300053121 Bacteria 1046
127 Ga0500603_001201 3300053150 Bacteria 6013
128 Ga0500603_001393 3300053150 Bacteria 5520
129 Ga0500603_004716 3300053150 Bacteria 2918
130 Ga0500622_0018800 3300053156 Bacteria 3672
131 Ga0500639_009401 3300053163 Bacteria 5110
132 Ga0500637_0000363 3300053178 Bacteria 17196
133 Ga0500637_0001017 3300053178 Bacteria 11476

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053088 Ga0500644_0015521 Ga0500644_0015521_344_1348 305
2 3300006038 Ga0075365_10009670 Ga0075365_100096703 311
3 3300006178 Ga0075367_10029305 Ga0075367_100293052 311
4 3300050492 nmdc:mga0yw44_4960_c1 nmdc:mga0yw44_4960_c1_3122_4084 311
5 3300050494 nmdc:mga06z11_14527_c1 nmdc:mga06z11_14527_c1_817_1779 311
6 3300006186 Ga0075369_10024699 Ga0075369_100246992 314
7 3300050516 nmdc:mga0sz30_6867_c1 nmdc:mga0sz30_6867_c1_1592_2542 314
8 3300049592 Ga0501076_0372296 Ga0501076_0372296_199_1152 315
9 iso_pu_bacteria 2513237145 2513917458 317
10 iso_pu_bacteria 2857524615 2857529640 317
11 iso_pu_bacteria 2935630451 2935630867 317
12 iso_pu_bacteria 2941507105 2941507519 317
13 iso_pu_bacteria 2941515067 2941515946 317
14 iso_pu_bacteria 2941523033 2941523346 317
15 3300024227 Ga0228598_1019949 Ga0228598_10199491 318
16 3300033180 Ga0307510_10053901 Ga0307510_100539013 318
17 3300048927 Ga0496124_0008672 Ga0496124_0008672_5864_6826 318
18 3300032126 Ga0307415_100056759 Ga0307415_1000567592 319
19 3300025942 Ga0207689_10033601 Ga0207689_100336012 320
20 3300026118 Ga0207675_100190775 Ga0207675_1001907752 320
21 3300037312 Ga0395899_0007298 Ga0395899_0007298_1330_2316 320
22 3300037418 Ga0395900_0100396 Ga0395900_0100396_519_1505 320
23 3300038443 Ga0395901_0003753 Ga0395901_0003753_1585_2571 320
24 3300046526 Ga0495666_0108368 Ga0495666_0108368_72_1043 320
25 3300049572 Ga0501036_0036100 Ga0501036_0036100_2573_3598 320
26 3300049589 Ga0501073_0030406 Ga0501073_0030406_1748_2773 320
27 3300053080 Ga0500635_0006245 Ga0500635_0006245_992_1963 320
28 3300053102 Ga0500554_000362 Ga0500554_000362_2224_3195 320
29 3300053150 Ga0500603_001201 Ga0500603_001201_2796_3767 320
30 3300053178 Ga0500637_0001017 Ga0500637_0001017_8644_9615 320
31 iso_pu_bacteria 2881665667 2881672230 320
32 3300005435 Ga0070714_100084185 Ga0070714_1000841852 321
33 3300006028 Ga0070717_10017148 Ga0070717_100171483 321
34 3300006178 Ga0075367_10012957 Ga0075367_100129572 321
35 3300006844 Ga0075428_100404188 Ga0075428_1004041882 321
36 3300009094 Ga0111539_10000096 Ga0111539_1000009692 321
37 3300014326 Ga0157380_10237036 Ga0157380_102370361 321
38 3300025928 Ga0207700_10002139 Ga0207700_100021392 321
39 3300025933 Ga0207706_10081852 Ga0207706_100818522 321
40 3300026089 Ga0207648_10187620 Ga0207648_101876202 321
41 3300026121 Ga0207683_10325997 Ga0207683_103259971 321
42 3300027907 Ga0207428_10000120 Ga0207428_100001205 321
43 3300035089 Ga0373944_0000875 Ga0373944_0000875_5450_6424 321
44 3300035170 Ga0373943_0000459 Ga0373943_0000459_10029_11003 321
45 3300035171 Ga0373946_0013095 Ga0373946_0013095_2063_3037 321
46 3300035695 Ga0373927_0001108 Ga0373927_0001108_8957_9931 321
47 3300037068 Ga0373925_0004131 Ga0373925_0004131_8619_9593 321
48 3300046475 Ga0495639_0139617 Ga0495639_0139617_83_1057 321
49 3300046531 Ga0495665_0016431 Ga0495665_0016431_829_1803 321
50 3300046642 Ga0495634_0002662 Ga0495634_0002662_10640_11611 321
51 3300046681 Ga0495647_0037699 Ga0495647_0037699_839_1813 321
52 3300046691 Ga0495670_0048743 Ga0495670_0048743_721_1695 321
53 3300047315 Ga0495581_0031869 Ga0495581_0031869_1917_2891 321
54 3300047319 Ga0495674_0140050 Ga0495674_0140050_741_1721 321
55 3300047673 Ga0495593_0080662 Ga0495593_0080662_597_1571 321
56 3300049571 Ga0501034_0457335 Ga0501034_0457335_23_997 321
57 3300050489 nmdc:mga03683_9869_c1 nmdc:mga03683_9869_c1_324_1307 321
58 3300050492 nmdc:mga0yw44_241142_c1 nmdc:mga0yw44_241142_c1_103_1086 321
59 3300050511 nmdc:mga08y16_96_c1 nmdc:mga08y16_96_c1_60394_61368 321
60 3300053150 Ga0500603_001393 Ga0500603_001393_1943_2914 321
61 iso_pu_bacteria 8006984368 8006985910 321
62 iso_pu_bacteria 8016530956 8016533914 321
63 iso_pu_bacteria 8016539877 8016547139 321
64 iso_pu_bacteria 8016557553 8016563352 321
65 iso_pu_bacteria 8016566248 8016572253 321
66 iso_pu_bacteria 8016595262 8016601105 321
67 3300005518 Ga0070699_100107873 Ga0070699_1001078732 322
68 3300006178 Ga0075367_10118634 Ga0075367_101186341 322
69 3300049460 Ga0495682_0083701 Ga0495682_0083701_63_1064 322
70 3300053121 Ga0500607_156781 Ga0500607_156781_46_1020 322
71 3300009147 Ga0114129_10256195 Ga0114129_102561952 323
72 3300030763 Ga0265763_1000899 Ga0265763_10008992 323
73 3300031344 Ga0265316_10249161 Ga0265316_102491612 323
74 3300035083 Ga0373926_0009211 Ga0373926_0009211_645_1622 323
75 3300035111 Ga0373923_0000459 Ga0373923_0000459_6556_7533 323
76 3300035113 Ga0373936_0013465 Ga0373936_0013465_1025_2002 323
77 3300035118 Ga0373954_0003279 Ga0373954_0003279_3675_4652 323
78 3300035120 Ga0373957_0048662 Ga0373957_0048662_138_1115 323
79 3300035171 Ga0373946_0001631 Ga0373946_0001631_5897_6874 323
80 3300035410 Ga0373924_0002062 Ga0373924_0002062_5360_6337 323
81 3300035692 Ga0373935_0000556 Ga0373935_0000556_12756_13733 323
82 3300035695 Ga0373927_0001508 Ga0373927_0001508_14380_15357 323
83 3300035724 Ga0373933_0020521 Ga0373933_0020521_399_1376 323
84 3300035725 Ga0373947_0003947 Ga0373947_0003947_1310_2287 323
85 3300036401 Ga0373937_0004798 Ga0373937_0004798_7574_8551 323
86 3300037068 Ga0373925_0002823 Ga0373925_0002823_10283_11260 323
87 3300046454 Ga0495592_0028691 Ga0495592_0028691_2534_3511 323
88 3300046460 Ga0495638_0021624 Ga0495638_0021624_660_1643 323
89 3300046472 Ga0495580_0004809 Ga0495580_0004809_10157_11134 323
90 3300046473 Ga0495582_0025427 Ga0495582_0025427_954_1931 323
91 3300046477 Ga0495664_0000425 Ga0495664_0000425_4585_5562 323
92 3300046511 Ga0495608_0042772 Ga0495608_0042772_1672_2649 323
93 3300046514 Ga0495618_0047666 Ga0495618_0047666_57_1034 323
94 3300046516 Ga0495628_0035072 Ga0495628_0035072_2432_3409 323
95 3300046517 Ga0495630_0002059 Ga0495630_0002059_9724_10701 323
96 3300046529 Ga0495652_0014422 Ga0495652_0014422_5031_6008 323
97 3300046531 Ga0495665_0006079 Ga0495665_0006079_4873_5850 323
98 3300046533 Ga0495640_0106566 Ga0495640_0106566_225_1202 323
99 3300046535 Ga0495586_0063028 Ga0495586_0063028_482_1459 323
100 3300046543 Ga0495645_0040273 Ga0495645_0040273_1440_2417 323
101 3300046679 Ga0495623_0045064 Ga0495623_0045064_1317_2294 323
102 3300046680 Ga0495646_0016995 Ga0495646_0016995_3285_4262 323
103 3300046683 Ga0495658_0027490 Ga0495658_0027490_1269_2246 323
104 3300046690 Ga0495624_0019231 Ga0495624_0019231_2361_3338 323
105 3300047319 Ga0495674_0002976 Ga0495674_0002976_15338_16315 323
106 3300047321 Ga0495676_0055820 Ga0495676_0055820_2066_3043 323
107 3300047323 Ga0495683_0013970 Ga0495683_0013970_619_1602 323
108 3300047471 Ga0495684_0039139 Ga0495684_0039139_356_1333 323
109 3300047673 Ga0495593_0029942 Ga0495593_0029942_1641_2618 323
110 3300048090 Ga0495615_0009772 Ga0495615_0009772_464_1447 323
111 3300050507 nmdc:mga05p37_167391_c1 nmdc:mga05p37_167391_c1_604_1599 323
112 3300053078 Ga0495612_0010051 Ga0495612_0010051_2250_3227 323
113 3300025929 Ga0207664_10098363 Ga0207664_100983631 324
114 3300046457 Ga0495590_0031475 Ga0495590_0031475_345_1514 324
115 3300005367 Ga0070667_100039461 Ga0070667_1000394611 325
116 3300006028 Ga0070717_10124618 Ga0070717_101246183 325
117 3300006048 Ga0075363_100017728 Ga0075363_1000177282 325
118 3300006178 Ga0075367_10060676 Ga0075367_100606762 325
119 3300017792 Ga0163161_10210030 Ga0163161_102100301 325
120 3300031507 Ga0307509_10018412 Ga0307509_100184127 325
121 3300031507 Ga0307509_10130317 Ga0307509_101303173 325
122 3300031616 Ga0307508_10083305 Ga0307508_100833053 325
123 3300031730 Ga0307516_10002210 Ga0307516_1000221014 325
124 3300031730 Ga0307516_10124666 Ga0307516_101246662 325
125 3300033180 Ga0307510_10230776 Ga0307510_102307761 325
126 3300037068 Ga0373925_0151677 Ga0373925_0151677_494_1477 325
127 3300046518 Ga0495631_0028795 Ga0495631_0028795_949_1932 325
128 3300046538 Ga0495609_0056854 Ga0495609_0056854_486_1481 325
129 3300046557 Ga0495622_0088548 Ga0495622_0088548_83_1066 325
130 3300046664 Ga0495659_0025927 Ga0495659_0025927_785_1798 325
131 3300046674 Ga0495588_0035353 Ga0495588_0035353_182_1177 325
132 3300050494 nmdc:mga06z11_13319_c2 nmdc:mga06z11_13319_c2_431_1426 325
133 3300053119 Ga0500595_015415 Ga0500595_015415_1354_2337 325
134 3300007788 Ga0099795_10036703 Ga0099795_100367032 326
135 3300047469 Ga0495673_0039615 Ga0495673_0039615_301_1287 326
136 3300053119 Ga0500595_006139 Ga0500595_006139_2717_3703 326
137 3300014745 Ga0157377_10189159 Ga0157377_101891591 327
138 3300046491 Ga0495584_0052292 Ga0495584_0052292_142_1134 327
139 3300053085 Ga0495619_0009778 Ga0495619_0009778_3190_4179 327
140 3300053091 Ga0500647_0011468 Ga0500647_0011468_566_1555 327
141 3300053150 Ga0500603_004716 Ga0500603_004716_466_1455 327
142 3300053163 Ga0500639_009401 Ga0500639_009401_1400_2389 327
143 3300053178 Ga0500637_0000363 Ga0500637_0000363_1607_2596 327
144 3300000549 LJQas_1010101 LJQas_10101012 328
145 3300053093 Ga0500651_0001967 Ga0500651_0001967_3107_4129 328
146 3300053156 Ga0500622_0018800 Ga0500622_0018800_1551_2573 328

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03781

FGE-sulfatase

Sulfatase-modifying factor enzyme 1

80

384

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pf5-assembly5.cif.gz_E crystal structure of the human tsg-6 link module 0.7334 146 177
1y1j-assembly1.cif.gz_X human formylglycine generating enzyme, sulfonic acid/desulfurated form 0.6227 24 324
1y1f-assembly1.cif.gz_X human formylglycine generating enzyme with cysteine sulfenic acid 0.6217 24 324
8aru-assembly1.cif.gz_A crystal structure of human formylglycine generating enzyme 0.6201 24 321
2afy-assembly1.cif.gz_X formylglycine generating enzyme c341s mutant 0.6161 24 324
ID Description Score Start End Superfamily
af_I6Y8I5_2_297_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.6577 24 321 3.90.1580.10
af_I6Y8I5_2_297_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.644 24 321 3.90.1580.10
af_I1NCH8_80_185_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.5879 22 57 3.40.50.2000
af_A0A2R8Q5G7_74_369_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.5732 7 321 3.90.1580.10
af_A0A2R8Q5G7_74_369_3.90.1580.10 Alpha Beta;Alpha-Beta Complex;paralog of FGE (formylglycine-generating enzyme);paralog of FGE (formylglycine-generating enzyme) 0.5642 7 321 3.90.1580.10
ID Description Score Start End GO Terms
AF-X7YJB7-F1-model_v4 Formylglycine-generating sulfatase enzyme family protein 0.8917 24 135 GO:0120147
AF-A0A1H8UN22-F1-model_v4 Serine/threonine-protein kinase pkn1 (EC 2.7.11.1) 0.8847 22 182 GO:0004676
GO:0004677
GO:0004679
GO:0004711
GO:0035175
GO:0035402
GO:0035403
GO:0035979
GO:0044022
GO:0044023
GO:0044024
GO:0044025
GO:0072354
GO:0072371
GO:0072518
GO:0120147
GO:0140823
GO:0140855
GO:0140857
GO:1990244
AF-A0A7W0UZR3-F1-model_v4 SUMF1/EgtB/PvdO family nonheme iron enzyme 0.8696 25 171 GO:0120147
AF-A0A3D4Z412-F1-model_v4 Gliding motility-associated lipoprotein GldK 0.8672 25 170 GO:0120147
AF-A0A2E2T4C8-F1-model_v4 Sulfatase-modifying factor 1 0.8672 34 173 GO:0120147

Feature Viewer

pLDDT pTM Quality
56.72 0.68 Medium
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Predicted Structure (AlphaFold2)

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