F196016

General Info

Members Datasets Scaffolds Average Seq Length
145 90 290 708

Family's Representative Sequence

Representative Sequence 3300050513|nmdc:mga0rr50_19904_c1|nmdc:mga0rr50_19904_c1_1068_3314
Length 748
Sequence MASPVGPAAASGPGTTRLAGPSARSGQAAGTPGTRSVTFSTRILIGLGAGILVGLFLGERATAVKWAADGFVKLLQMTVLPYVTLSIISSLGTLQMSSAKRLAWHAGVVLVSIWAIALAFALLIPLTFPHVQSASFFSTTLVEQRPPFNFVDLYIPSNPFYSLANNIVPAVVLFSIVVGTALIGITRKQPLLDMLSIATETLSRATRFIVQLTPFGLFAIAATTAGTISLEQVGRLQVYLVAYVAVSVLMSLWVLPGLVSALTPIRIRDMFSLTRDALITAFVVGDLFIVLPVLITAAQTLVDEYGLAAGTEANLPGVIVPASFNFPHTGKLLSLSFVLFAGWFADAVVQPSDYMRLAFTGLVTSFGSLNSAVPFLLDQFRIPADTFQLFLASSVINARFGTLVAAVHALVLALLGTCAMSRTLRWERGRLFRYVAVTLVLTAVTIGGTRVLFARVVPQTYTKDQVLSSMHVRNPVRAVVHRDAVPLGPKETGGLLDVIRARGVLRVGYLPSSLPYAYFNSRNELVGLDVEMAHRLASELHVTLEFVPLDLDTWQGQIESGMCDIVMSGAFLTTLRASRTLFGTSYLDETLAIVVLDSDRARFTQWDAIRAMPHLRVAVRDLPYYWEKARELLPDATLQPFGNFGDLISSGTHDFDAIVFPAERGSAWTLIYPEYTVVVPQPATIHVPLAYAIAKHDTEFQSFINSWVELKKKDGTVERLYDYWVLGRDVEPARPRWSIMRNVFHWVQ

Samples

Sample ID Description Type Environment
1 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
60 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
61 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
62 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
63 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
64 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
69 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
70 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
71 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
72 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
73 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
74 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
75 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
76 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
77 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
78 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
79 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
80 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
81 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
82 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
83 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
84 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
85 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
86 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
87 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
88 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
89 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
90 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.14
Nodule 0
Rhizoplane 0.69
Rhizosphere 95.17
Stem 0
Stem Tuber 0
Unclassified 16.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0rr50_19904_c1 3300050513 Unclassified 4542
2 JGI25405J52794_10000994 3300003911 Bacteria 4481
3 Ga0065715_10003494 3300005293 Bacteria 5294
4 Ga0065707_10003981 3300005295 Bacteria 4126
5 Ga0070670_100004513 3300005331 Bacteria 11670
6 Ga0070670_100025114 3300005331 Bacteria 5127
7 Ga0068869_100040093 3300005334 Unclassified 3347
8 Ga0070660_100064181 3300005339 Unclassified 2856
9 Ga0070673_100040228 3300005364 Bacteria 3585
10 Ga0070673_100054027 3300005364 Unclassified 3158
11 Ga0070659_100038226 3300005366 Bacteria 3743
12 Ga0070678_100008307 3300005456 Bacteria 6215
13 Ga0070678_100083698 3300005456 Bacteria 2426
14 Ga0070662_100026137 3300005457 Archaea 4040
15 Ga0070662_100057764 3300005457 Unclassified 2820
16 Ga0068867_100056711 3300005459 Bacteria 2899
17 Ga0070693_100011577 3300005547 Bacteria 4446
18 Ga0070693_100027935 3300005547 Bacteria 3063
19 Ga0068859_100072768 3300005617 Unclassified 3474
20 Ga0068859_100132587 3300005617 Unclassified 2564
21 Ga0068858_100058940 3300005842 Unclassified 3549
22 Ga0068862_100084234 3300005844 Unclassified 2762
23 Ga0081455_10002604 3300005937 Bacteria 21394
24 Ga0081538_10000749 3300005981 Bacteria 35432
25 Ga0081540_1010459 3300005983 Bacteria 6280
26 Ga0075365_10034682 3300006038 Bacteria 3260
27 Ga0075364_10008396 3300006051 Bacteria 6172
28 Ga0075364_10064264 3300006051 Bacteria 2409
29 Ga0075367_10002821 3300006178 Bacteria 8071
30 Ga0075428_100005932 3300006844 Bacteria 13579
31 Ga0075428_100009324 3300006844 Bacteria 10886
32 Ga0075428_100018659 3300006844 Bacteria 7669
33 Ga0075428_100026253 3300006844 Bacteria 6450
34 Ga0075428_100028036 3300006844 Bacteria 6229
35 Ga0075428_100054928 3300006844 Unclassified 4364
36 Ga0075430_100008135 3300006846 Bacteria 8865
37 Ga0075431_100008164 3300006847 Bacteria 10460
38 Ga0075431_100025507 3300006847 Bacteria 6059
39 Ga0075433_10000045 3300006852 Bacteria 51204
40 Ga0075433_10001950 3300006852 Bacteria 15512
41 Ga0075433_10007806 3300006852 Bacteria 8508
42 Ga0075434_100000014 3300006871 Bacteria 80310
43 Ga0075434_100026147 3300006871 Bacteria 5716
44 Ga0075434_100028666 3300006871 Bacteria 5473
45 Ga0075434_100096455 3300006871 Bacteria 2962
46 Ga0075434_100123238 3300006871 Unclassified 2608
47 Ga0097620_100072769 3300006931 Unclassified 3474
48 Ga0097620_100132586 3300006931 Unclassified 2564
49 Ga0075435_100005271 3300007076 Bacteria 9004
50 Ga0075435_100020233 3300007076 Bacteria 5095
51 Ga0111539_10001695 3300009094 Bacteria 29357
52 Ga0111539_10015353 3300009094 Bacteria 9535
53 Ga0114129_10000054 3300009147 Bacteria 99951
54 Ga0114129_10001221 3300009147 Bacteria 34159
55 Ga0114129_10015458 3300009147 Bacteria 10857
56 Ga0114129_10020174 3300009147 Bacteria 9486
57 Ga0114129_10027063 3300009147 Bacteria 8120
58 Ga0114129_10031777 3300009147 Bacteria 7463
59 Ga0105243_10022686 3300009148 Bacteria 4773
60 Ga0163162_10054163 3300013306 Unclassified 4034
61 Ga0157375_10044039 3300013308 Bacteria 4332
62 Ga0157380_10016711 3300014326 Bacteria 5418
63 Ga0157380_10027570 3300014326 Bacteria 4320
64 Ga0207697_10000220 3300025315 Bacteria 30814
65 Ga0207688_10007172 3300025901 Bacteria 6062
66 Ga0207680_10018783 3300025903 Unclassified 3684
67 Ga0207643_10006093 3300025908 Bacteria 6446
68 Ga0207681_10016286 3300025923 Bacteria 4648
69 Ga0207650_10024674 3300025925 Bacteria 4277
70 Ga0207650_10050494 3300025925 Bacteria 3076
71 Ga0207659_10001203 3300025926 Bacteria 15449
72 Ga0207659_10012458 3300025926 Bacteria 5412
73 Ga0207690_10011155 3300025932 Bacteria 5363
74 Ga0207690_10049248 3300025932 Bacteria 2808
75 Ga0207706_10018004 3300025933 Bacteria 6356
76 Ga0207706_10055734 3300025933 Bacteria 3485
77 Ga0207706_10058969 3300025933 Bacteria 3381
78 Ga0207691_10009226 3300025940 Bacteria 9469
79 Ga0207691_10047687 3300025940 Unclassified 3931
80 Ga0207689_10036400 3300025942 Bacteria 4087
81 Ga0207703_10044313 3300026035 Unclassified 3575
82 Ga0207678_10077370 3300026067 Bacteria 2850
83 Ga0207648_10039947 3300026089 Bacteria 4124
84 Ga0207648_10074178 3300026089 Bacteria 2965
85 Ga0207674_10039798 3300026116 Unclassified 4872
86 Ga0207675_100042189 3300026118 Bacteria 4258
87 Ga0207683_10087542 3300026121 Unclassified 2770
88 Ga0207683_10092361 3300026121 Bacteria 2697
89 Ga0209974_10001437 3300027876 Bacteria 8629
90 Ga0268265_10010395 3300028380 Bacteria 6285
91 Ga0307408_100011420 3300031548 Bacteria 5869
92 Ga0316576_10014414 3300031727 Bacteria 5283
93 Ga0316577_10017790 3300031733 Bacteria 3928
94 Ga0307416_100032577 3300032002 Bacteria 3940
95 Ga0316582_0004319 3300036647 Bacteria 7157
96 Ga0373925_0001578 3300037068 Bacteria 19285
97 Ga0373925_0019518 3300037068 Unclassified 4932
98 Ga0373925_0025136 3300037068 Unclassified 4349
99 Ga0451577_0078710 3300042876 Bacteria 2939
100 Ga0495640_0070975 3300046533 Bacteria 2338
101 Ga0496112_0026528 3300048915 Bacteria 5576
102 Ga0501033_0010759 3300049570 Bacteria 7015
103 Ga0501036_0054519 3300049572 Bacteria 3387
104 Ga0501041_0004631 3300049577 Bacteria 7981
105 Ga0501042_0014777 3300049578 Bacteria 5331
106 Ga0501068_0010352 3300049584 Bacteria 5238
107 Ga0501071_0004976 3300049587 Bacteria 8488
108 Ga0501072_0050760 3300049588 Bacteria 3266
109 Ga0501073_0042940 3300049589 Bacteria 3190
110 Ga0501075_0000631 3300049591 Bacteria 21544
111 Ga0501076_0007822 3300049592 Bacteria 7791
112 Ga0501076_0015814 3300049592 Bacteria 5709
113 Ga0501076_0020818 3300049592 Bacteria 5023
114 Ga0501077_0014289 3300049593 Bacteria 4987
115 Ga0501077_0057322 3300049593 Unclassified 2473
116 Ga0501079_0003033 3300049741 Bacteria 12291
117 Ga0501079_0038780 3300049741 Bacteria 3674
118 Ga0501079_0062292 3300049741 Bacteria 2878
119 Ga0501083_0085061 3300049744 Bacteria 2093
120 Ga0501045_0001717 3300049824 Bacteria 14755
121 nmdc:mga0yw44_40709_c1 3300050492 Bacteria 2762
122 nmdc:mga05p37_11_c1 3300050507 Bacteria 149577
123 nmdc:mga05p37_3864_c1 3300050507 Bacteria 17524
124 nmdc:mga05p37_4445_c1 3300050507 Bacteria 16388
125 nmdc:mga05p37_4485_c1 3300050507 Bacteria 16320
126 nmdc:mga09592_3347_c1 3300050508 Bacteria 12962
127 nmdc:mga09592_53266_c1 3300050508 Bacteria 3417
128 nmdc:mga0qj67_20944_c1 3300050509 Bacteria 5011
129 nmdc:mga0qj67_4894_c1 3300050509 Bacteria 9740
130 nmdc:mga06r32_14307_c1 3300050510 Bacteria 7198
131 nmdc:mga06r32_68656_c1 3300050510 Unclassified 3425
132 nmdc:mga08y16_115717_c1 3300050511 Bacteria 2792
133 nmdc:mga08y16_48520_c1 3300050511 Bacteria 4444
134 nmdc:mga0n895_15630_c1 3300050512 Bacteria 6930
135 nmdc:mga0n895_2776_c1 3300050512 Bacteria 13847
136 nmdc:mga0n895_7612_c1 3300050512 Bacteria 9312
137 nmdc:mga08x19_6624_c1 3300050514 Bacteria 6867
138 nmdc:mga0a205_218_c1 3300050515 Bacteria 40510
139 nmdc:mga0a205_344_c1 3300050515 Bacteria 35080
140 nmdc:mga0a205_7995_c1 3300050515 Bacteria 9608
141 Ga0500568_0035170 3300053139 Unclassified 2045
142 Ga0501084_0006564 3300054114 Bacteria 9558
143 Ga0501082_0014333 3300060353 Bacteria 6820
144 Ga0530510_0000823 3300061734 Bacteria 20345
145 Ga0530510_0045604 3300061734 Bacteria 3167
146 nmdc:mga0rr50_19904_c1
147 JGI25405J52794_10000994
148 Ga0065715_10003494
149 Ga0065707_10003981
150 Ga0070670_100004513
151 Ga0070670_100025114
152 Ga0068869_100040093
153 Ga0070660_100064181
154 Ga0070673_100040228
155 Ga0070673_100054027
156 Ga0070659_100038226
157 Ga0070678_100008307
158 Ga0070678_100083698
159 Ga0070662_100026137
160 Ga0070662_100057764
161 Ga0068867_100056711
162 Ga0070693_100011577
163 Ga0070693_100027935
164 Ga0068859_100072768
165 Ga0068859_100132587
166 Ga0068858_100058940
167 Ga0068862_100084234
168 Ga0081455_10002604
169 Ga0081538_10000749
170 Ga0081540_1010459
171 Ga0075365_10034682
172 Ga0075364_10008396
173 Ga0075364_10064264
174 Ga0075367_10002821
175 Ga0075428_100005932
176 Ga0075428_100009324
177 Ga0075428_100018659
178 Ga0075428_100026253
179 Ga0075428_100028036
180 Ga0075428_100054928
181 Ga0075430_100008135
182 Ga0075431_100008164
183 Ga0075431_100025507
184 Ga0075433_10000045
185 Ga0075433_10001950
186 Ga0075433_10007806
187 Ga0075434_100000014
188 Ga0075434_100026147
189 Ga0075434_100028666
190 Ga0075434_100096455
191 Ga0075434_100123238
192 Ga0097620_100072769
193 Ga0097620_100132586
194 Ga0075435_100005271
195 Ga0075435_100020233
196 Ga0111539_10001695
197 Ga0111539_10015353
198 Ga0114129_10000054
199 Ga0114129_10001221
200 Ga0114129_10015458
201 Ga0114129_10020174
202 Ga0114129_10027063
203 Ga0114129_10031777
204 Ga0105243_10022686
205 Ga0163162_10054163
206 Ga0157375_10044039
207 Ga0157380_10016711
208 Ga0157380_10027570
209 Ga0207697_10000220
210 Ga0207688_10007172
211 Ga0207680_10018783
212 Ga0207643_10006093
213 Ga0207681_10016286
214 Ga0207650_10024674
215 Ga0207650_10050494
216 Ga0207659_10001203
217 Ga0207659_10012458
218 Ga0207690_10011155
219 Ga0207690_10049248
220 Ga0207706_10018004
221 Ga0207706_10055734
222 Ga0207706_10058969
223 Ga0207691_10009226
224 Ga0207691_10047687
225 Ga0207689_10036400
226 Ga0207703_10044313
227 Ga0207678_10077370
228 Ga0207648_10039947
229 Ga0207648_10074178
230 Ga0207674_10039798
231 Ga0207675_100042189
232 Ga0207683_10087542
233 Ga0207683_10092361
234 Ga0209974_10001437
235 Ga0268265_10010395
236 Ga0307408_100011420
237 Ga0316576_10014414
238 Ga0316577_10017790
239 Ga0307416_100032577
240 Ga0316582_0004319
241 Ga0373925_0001578
242 Ga0373925_0019518
243 Ga0373925_0025136
244 Ga0451577_0078710
245 Ga0495640_0070975
246 Ga0496112_0026528
247 Ga0501033_0010759
248 Ga0501036_0054519
249 Ga0501041_0004631
250 Ga0501042_0014777
251 Ga0501068_0010352
252 Ga0501071_0004976
253 Ga0501072_0050760
254 Ga0501073_0042940
255 Ga0501075_0000631
256 Ga0501076_0007822
257 Ga0501076_0015814
258 Ga0501076_0020818
259 Ga0501077_0014289
260 Ga0501077_0057322
261 Ga0501079_0003033
262 Ga0501079_0038780
263 Ga0501079_0062292
264 Ga0501083_0085061
265 Ga0501045_0001717
266 nmdc:mga0yw44_40709_c1
267 nmdc:mga05p37_11_c1
268 nmdc:mga05p37_3864_c1
269 nmdc:mga05p37_4445_c1
270 nmdc:mga05p37_4485_c1
271 nmdc:mga09592_3347_c1
272 nmdc:mga09592_53266_c1
273 nmdc:mga0qj67_20944_c1
274 nmdc:mga0qj67_4894_c1
275 nmdc:mga06r32_14307_c1
276 nmdc:mga06r32_68656_c1
277 nmdc:mga08y16_115717_c1
278 nmdc:mga08y16_48520_c1
279 nmdc:mga0n895_15630_c1
280 nmdc:mga0n895_2776_c1
281 nmdc:mga0n895_7612_c1
282 nmdc:mga08x19_6624_c1
283 nmdc:mga0a205_218_c1
284 nmdc:mga0a205_344_c1
285 nmdc:mga0a205_7995_c1
286 Ga0500568_0035170
287 Ga0501084_0006564
288 Ga0501082_0014333
289 Ga0530510_0000823
290 Ga0530510_0045604

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00497

SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

505

727

0.97

PF00375

SDF

Sodium:dicarboxylate symporter family

39

417

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6gpc-assembly1.cif.gz_A crystal structure of the arginine-bound form of domain 1 from tmargbp 0.9545 471 560
5t0w-assembly2.cif.gz_B crystal structure of the ancestral amino acid-binding protein anccdt-1, a precursor of cyclohexadienyl dehydratase 0.8921 467 698
5t0w-assembly4.cif.gz_D crystal structure of the ancestral amino acid-binding protein anccdt-1, a precursor of cyclohexadienyl dehydratase 0.8884 466 698
8cq4-assembly1.cif.gz_A bifunctional cyclohexadienyl dehydratase/chorismate mutase from janthinobacterium sp. hh01 0.8879 468 698
5t0w-assembly2.cif.gz_B crystal structure of the ancestral amino acid-binding protein anccdt-1, a precursor of cyclohexadienyl dehydratase 0.8849 467 698
ID Description Score Start End Superfamily
af_P0AEM9_31_126_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9205 466 560 3.40.190.10
5hmtA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9126 466 697 3.40.190.10
3vvfB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9123 471 703 3.40.190.10
af_P0AEU0_25_107_3.40.190.10 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.91 476 557 3.40.190.10
3kbrA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9071 466 697 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A7C7ZLR1-F1-model_v4 Transporter substrate-binding domain-containing protein 0.9268 469 551 GO:0030313
AF-A0A7C8DEW9-F1-model_v4 Cation:dicarboxylase symporter family transporter 0.9262 7 721 GO:0015293
GO:0016020
AF-A0A3B8YBA0-F1-model_v4 Solute-binding protein family 3/N-terminal domain-containing protein 0.9257 1 721 GO:0015293
GO:0016020
GO:0030313
AF-A0A3B8YBA0-F1-model_v4 Solute-binding protein family 3/N-terminal domain-containing protein 0.9245 1 721 GO:0015293
GO:0016020
GO:0030313
AF-F4MXY0-F1-model_v4 Arginine-binding periplasmic protein 1 0.9202 477 563 GO:0030288

Map