F195914

General Info

Members Datasets Scaffolds Average Seq Length
145 124 290 391

Family's Representative Sequence

Representative Sequence 3300049585|Ga0501069_0038544|Ga0501069_0038544_525_1859
Length 444
Sequence VDRRHGVETTFFATFSEQIQDPWETDDHALAALKNFEGRPMHDLCDAAEMDDPMAGHVPNVIAGARGRFHRMLEAVQALAPLITAERSEFDGGRRLPEAVFGALATAGLFRLWLPSALGGPELSPFEFMRVVEAASALDGSVGWLVGNGGGMSRLGGYLDEVVAREWFADPRAFVASSTGAVGTAIAVAGGYRVSGHWPFGSGAHHATRFMVLASVRPEDPSSPLLCCYLGRADVTVLDNWHVSGLRGTGSCDFEARNVFVPDVHTHPFLGLQPTQPGPLYRMPPSSVFAWSISGVPLGIASGAITSFAELACRKSRPGIRTLLRDRETVQATVGRAKAALRAARAFVIDAMTELTAATESGGEYLMKARADVRIANAHAADTAMSITDELAASAGAAAIFETCALERAVRDARAAAKHIAMSPNNYIIAGRLALGLDPGAARF

Samples

Sample ID Description Type Environment
1 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
23 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
40 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
61 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
66 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
67 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
68 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
69 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
70 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
71 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
72 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
73 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
74 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
79 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
80 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
81 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
82 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
83 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
84 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
85 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
86 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
87 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
88 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
89 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
90 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
91 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
92 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
93 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
94 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
95 2842038055 Bradyrhizobium centrosematis SEMIA 424 Isolate Nodule
96 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
97 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
98 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
99 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
100 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
101 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
102 2906610324
103 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
104 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
105 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
106 2922425934
107 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
108 2935908558 Bradyrhizobium sp. F1.1.1 Isolate Nodule
109 2935926038 Bradyrhizobium sp. F1.2.1 Isolate Nodule
110 2935934488 Bradyrhizobium sp. F1.2.2 Isolate Nodule
111 2935942939 Bradyrhizobium sp. F1.2.6 Isolate Nodule
112 2935951376 Bradyrhizobium sp. F1.2.8 Isolate Nodule
113 2935967501 Bradyrhizobium sp. F1.6.2 Isolate Nodule
114 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
115 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
116 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
117 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
118 3005718088 Bradyrhizobium sp. CCBAU 53338 Isolate Nodule
119 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
120 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
121 8019687851 Bradyrhizobium sp. F1.13.4 Isolate Nodule
122 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
123 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule
124 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 77.62
Metatranscriptomes 0
Isolates 22.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.52
Nodule 19.31
Rhizoplane 2.76
Rhizosphere 62.76
Stem 0
Stem Tuber 0
Unclassified 1.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501069_0038544 3300049585 Bacteria 2639
2 JGI25404J52841_10001659 3300003659 Bacteria 3997
3 Ga0068868_100047298 3300005338 Bacteria 3370
4 Ga0070661_100136699 3300005344 Bacteria 1845
5 Ga0070668_100100846 3300005347 Bacteria 2287
6 Ga0070671_100234835 3300005355 Bacteria 1556
7 Ga0070663_100019961 3300005455 Bacteria 4426
8 Ga0068853_100139090 3300005539 Bacteria 2179
9 Ga0070665_100067944 3300005548 Bacteria 3573
10 Ga0070665_100103321 3300005548 Bacteria 2853
11 Ga0068857_100054323 3300005577 Bacteria 3554
12 Ga0068857_100069642 3300005577 Bacteria 3133
13 Ga0068856_100000332 3300005614 Bacteria 51880
14 Ga0068861_100028702 3300005719 Bacteria 4061
15 Ga0068870_10023437 3300005840 Bacteria 3044
16 Ga0068858_100042650 3300005842 Bacteria 4206
17 Ga0068858_100107805 3300005842 Bacteria 2600
18 Ga0068862_100192116 3300005844 Bacteria 1838
19 Ga0081455_10025215 3300005937 Bacteria 5493
20 Ga0081540_1000565 3300005983 Bacteria 35910
21 Ga0081540_1004979 3300005983 Bacteria 9987
22 Ga0081540_1006983 3300005983 Bacteria 8126
23 Ga0081540_1011449 3300005983 Bacteria 5926
24 Ga0081540_1017122 3300005983 Bacteria 4500
25 Ga0081540_1028581 3300005983 Bacteria 3128
26 Ga0081540_1045888 3300005983 Bacteria 2213
27 Ga0075365_10026802 3300006038 Bacteria 3662
28 Ga0075365_10073132 3300006038 Bacteria 2310
29 Ga0075370_10013880 3300006353 Bacteria 4287
30 Ga0075430_100078606 3300006846 Bacteria 2765
31 Ga0075431_100094440 3300006847 Bacteria 3086
32 Ga0068865_100166268 3300006881 Bacteria 1687
33 Ga0099824_1020308 3300006942 Bacteria 4929
34 Ga0105240_10038215 3300009093 Bacteria 6159
35 Ga0111539_10220102 3300009094 Bacteria 2211
36 Ga0105243_10065842 3300009148 Bacteria 2912
37 Ga0105241_10024034 3300009174 Bacteria 4524
38 Ga0105248_10044713 3300009177 Bacteria 4967
39 Ga0105237_10035180 3300009545 Bacteria 5070
40 Ga0105238_10139401 3300009551 Bacteria 2402
41 Ga0105246_10052630 3300011119 Bacteria 2799
42 Ga0157369_10016572 3300013105 Bacteria 8283
43 Ga0157374_10269300 3300013296 Bacteria 1679
44 Ga0157378_10099917 3300013297 Bacteria 2648
45 Ga0163162_10330716 3300013306 Bacteria 1656
46 Ga0157372_10174576 3300013307 Bacteria 2487
47 Ga0157375_10077081 3300013308 Bacteria 3362
48 Ga0157376_10162388 3300014969 Bacteria 2027
49 Ga0209233_1011546 3300025261 Bacteria 2598
50 Ga0207688_10028394 3300025901 Bacteria 3078
51 Ga0207643_10027199 3300025908 Bacteria 3169
52 Ga0207695_10050691 3300025913 Bacteria 4364
53 Ga0207649_10115003 3300025920 Bacteria 1804
54 Ga0207644_10065924 3300025931 Bacteria 2635
55 Ga0207706_10044447 3300025933 Bacteria 3937
56 Ga0207691_10299304 3300025940 Unclassified 1382
57 Ga0207711_10035329 3300025941 Bacteria 4236
58 Ga0207689_10234663 3300025942 Bacteria 1516
59 Ga0207679_10226615 3300025945 Bacteria 1575
60 Ga0207678_10038135 3300026067 Bacteria 4177
61 Ga0207678_10040953 3300026067 Bacteria 4016
62 Ga0207678_10071668 3300026067 Bacteria 2971
63 Ga0207702_10000065 3300026078 Bacteria 119449
64 Ga0207641_10053114 3300026088 Bacteria 3433
65 Ga0207674_10017457 3300026116 Bacteria 7831
66 Ga0207675_100056213 3300026118 Bacteria 3670
67 Ga0207683_10047597 3300026121 Bacteria 3755
68 Ga0207683_10146600 3300026121 Bacteria 2129
69 Ga0268266_10071095 3300028379 Bacteria 3016
70 Ga0268265_10123827 3300028380 Bacteria 2135
71 Ga0268265_10172490 3300028380 Bacteria 1850
72 Ga0268264_10033861 3300028381 Bacteria 4200
73 Ga0307515_10055973 3300028794 Bacteria 5745
74 Ga0307516_10006834 3300031730 Bacteria 13300
75 Ga0395899_0191280 3300037312 Bacteria 1432
76 Ga0395900_0000601 3300037418 Bacteria 49219
77 Ga0395900_0010489 3300037418 Bacteria 9477
78 Ga0395898_0004182 3300037466 Bacteria 15816
79 Ga0395901_0045202 3300038443 Bacteria 4569
80 Ga0395901_0105832 3300038443 Bacteria 2953
81 Ga0495638_0021113 3300046460 Bacteria 4295
82 Ga0495668_0023431 3300046616 Bacteria 3522
83 Ga0495681_0048252 3300047470 Bacteria 2020
84 Ga0496102_0053578 3300048905 Bacteria 3677
85 Ga0496107_0146741 3300048910 Bacteria 1745
86 Ga0496120_0053531 3300048923 Unclassified 2293
87 Ga0496121_0120216 3300048924 Bacteria 1985
88 Ga0496121_0156706 3300048924 Bacteria 1670
89 Ga0496125_0125112 3300048928 Bacteria 1824
90 Ga0496126_0002330 3300048929 Bacteria 26023
91 Ga0496126_0030808 3300048929 Bacteria 5078
92 Ga0496126_0279100 3300048929 Bacteria 1384
93 Ga0501033_0061346 3300049570 Bacteria 2771
94 Ga0501034_0005489 3300049571 Bacteria 13840
95 Ga0501036_0316335 3300049572 Bacteria 1305
96 Ga0501046_0024688 3300049580 Bacteria 4926
97 Ga0501068_0008445 3300049584 Bacteria 5731
98 Ga0501073_0235101 3300049589 Bacteria 1266
99 Ga0501074_0042349 3300049590 Bacteria 3295
100 Ga0501083_0050785 3300049744 Bacteria 2790
101 Ga0501044_0012467 3300049823 Bacteria 9206
102 Ga0501044_0068457 3300049823 Bacteria 3616
103 nmdc:mga0yw44_30540_c1 3300050492 Bacteria 3124
104 nmdc:mga07m45_2820_c1 3300050496 Bacteria 8221
105 nmdc:mga09592_72795_c1 3300050508 Bacteria 2919
106 nmdc:mga0qj67_51771_c1 3300050509 Bacteria 3248
107 nmdc:mga06r32_79549_c1 3300050510 Bacteria 3189
108 nmdc:mga08y16_228438_c1 3300050511 Bacteria 1925
109 nmdc:mga0rr50_371037_c1 3300050513 Bacteria 1206
110 Ga0500577_0000172 3300053142 Bacteria 16529
111 Ga0500589_090422 3300053147 Bacteria 1349
112 2671118026 2667528175 Bacteria 7532676
113 2671122357 2667528175 Bacteria 7532676
114 2728752878 2728368998 Bacteria 8720350
115 2793071855 2791355197 Bacteria 8420563
116 2842041226 2842038055 Bacteria 8002051
117 2842045829 2842045827 Bacteria 8006841
118 2857529728 2857524615 Bacteria 6615449
119 2876766426 2876761206 Bacteria 10111113
120 2885377259 2885374607 Bacteria 8927485
121 2903730720 2903727486 Bacteria 8281579
122 2904691495 2904690495 Bacteria 9412302
123 2906610599
124 2908743785 2908739725 Bacteria 8628932
125 2908761693 2908756301 Bacteria 8864324
126 2922367178 2922361189 Bacteria 7436256
127 2922428723
128 2935634322 2935630451 Bacteria 8169952
129 2935910576 2935908558 Bacteria 8568796
130 2935927513 2935926038 Bacteria 8601059
131 2935936616 2935934488 Bacteria 8602579
132 2935943832 2935942939 Bacteria 8599779
133 2935952269 2935951376 Bacteria 8602333
134 2935969109 2935967501 Bacteria 8603075
135 2941511212 2941507105 Bacteria 8166816
136 2941518596 2941515067 Bacteria 8166720
137 2941527141 2941523033 Bacteria 8169134
138 3005479255 3005474847 Bacteria 9259049
139 3005724679 3005718088 Bacteria 8283608
140 8019558249 8019555841 Bacteria 9642137
141 8019567045 8019565922 Bacteria 9639779
142 8019696935 8019687851 Bacteria 8712826
143 8056677633 8056673599 Bacteria 7871253
144 8056685519 8056681323 Bacteria 8472857
145 8056695995 8056689827 Bacteria 6712655
146 Ga0501069_0038544
147 JGI25404J52841_10001659
148 Ga0068868_100047298
149 Ga0070661_100136699
150 Ga0070668_100100846
151 Ga0070671_100234835
152 Ga0070663_100019961
153 Ga0068853_100139090
154 Ga0070665_100067944
155 Ga0070665_100103321
156 Ga0068857_100054323
157 Ga0068857_100069642
158 Ga0068856_100000332
159 Ga0068861_100028702
160 Ga0068870_10023437
161 Ga0068858_100042650
162 Ga0068858_100107805
163 Ga0068862_100192116
164 Ga0081455_10025215
165 Ga0081540_1000565
166 Ga0081540_1004979
167 Ga0081540_1006983
168 Ga0081540_1011449
169 Ga0081540_1017122
170 Ga0081540_1028581
171 Ga0081540_1045888
172 Ga0075365_10026802
173 Ga0075365_10073132
174 Ga0075370_10013880
175 Ga0075430_100078606
176 Ga0075431_100094440
177 Ga0068865_100166268
178 Ga0099824_1020308
179 Ga0105240_10038215
180 Ga0111539_10220102
181 Ga0105243_10065842
182 Ga0105241_10024034
183 Ga0105248_10044713
184 Ga0105237_10035180
185 Ga0105238_10139401
186 Ga0105246_10052630
187 Ga0157369_10016572
188 Ga0157374_10269300
189 Ga0157378_10099917
190 Ga0163162_10330716
191 Ga0157372_10174576
192 Ga0157375_10077081
193 Ga0157376_10162388
194 Ga0209233_1011546
195 Ga0207688_10028394
196 Ga0207643_10027199
197 Ga0207695_10050691
198 Ga0207649_10115003
199 Ga0207644_10065924
200 Ga0207706_10044447
201 Ga0207691_10299304
202 Ga0207711_10035329
203 Ga0207689_10234663
204 Ga0207679_10226615
205 Ga0207678_10038135
206 Ga0207678_10040953
207 Ga0207678_10071668
208 Ga0207702_10000065
209 Ga0207641_10053114
210 Ga0207674_10017457
211 Ga0207675_100056213
212 Ga0207683_10047597
213 Ga0207683_10146600
214 Ga0268266_10071095
215 Ga0268265_10123827
216 Ga0268265_10172490
217 Ga0268264_10033861
218 Ga0307515_10055973
219 Ga0307516_10006834
220 Ga0395899_0191280
221 Ga0395900_0000601
222 Ga0395900_0010489
223 Ga0395898_0004182
224 Ga0395901_0045202
225 Ga0395901_0105832
226 Ga0495638_0021113
227 Ga0495668_0023431
228 Ga0495681_0048252
229 Ga0496102_0053578
230 Ga0496107_0146741
231 Ga0496120_0053531
232 Ga0496121_0120216
233 Ga0496121_0156706
234 Ga0496125_0125112
235 Ga0496126_0002330
236 Ga0496126_0030808
237 Ga0496126_0279100
238 Ga0501033_0061346
239 Ga0501034_0005489
240 Ga0501036_0316335
241 Ga0501046_0024688
242 Ga0501068_0008445
243 Ga0501073_0235101
244 Ga0501074_0042349
245 Ga0501083_0050785
246 Ga0501044_0012467
247 Ga0501044_0068457
248 nmdc:mga0yw44_30540_c1
249 nmdc:mga07m45_2820_c1
250 nmdc:mga09592_72795_c1
251 nmdc:mga0qj67_51771_c1
252 nmdc:mga06r32_79549_c1
253 nmdc:mga08y16_228438_c1
254 nmdc:mga0rr50_371037_c1
255 Ga0500577_0000172
256 Ga0500589_090422
257 2671118026
258 2671122357
259 2728752878
260 2793071855
261 2842041226
262 2842045829
263 2857529728
264 2876766426
265 2885377259
266 2903730720
267 2904691495
268 2906610599
269 2908743785
270 2908761693
271 2922367178
272 2922428723
273 2935634322
274 2935910576
275 2935927513
276 2935936616
277 2935943832
278 2935952269
279 2935969109
280 2941511212
281 2941518596
282 2941527141
283 3005479255
284 3005724679
285 8019558249
286 8019567045
287 8019696935
288 8056677633
289 8056685519
290 8056695995

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

291

424

0.98

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

288

418

0.89

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

71

169

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7f70-assembly1.cif.gz_A crystal structure of rv3094c 0.9155 11 376
7f74-assembly1.cif.gz_D rv3094c in complex with fmn. 0.9073 12 376
2rfq-assembly1.cif.gz_A crystal structure of 3-hsa hydroxylase from rhodococcus sp. rha1 0.9072 11 376
7f72-assembly1.cif.gz_A rv3094c in complex with fad and eth. 0.9055 12 376
2rfq-assembly1.cif.gz_B crystal structure of 3-hsa hydroxylase from rhodococcus sp. rha1 0.905 11 376
ID Description Score Start End Superfamily
5lvwA02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9413 115 207 2.40.110.10
3afeD02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9409 115 207 2.40.110.10
af_O05773_110_200_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9336 115 207 2.40.110.10
2or0A01 Mainly Alpha;Orthogonal Bundle;Butyryl-Coa Dehydrogenase, subunit A; domain 1;Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.9084 11 113 1.10.540.10
2or0A02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9068 116 207 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A1H4R768-F1-model_v4 Acyl-CoA dehydrogenase 0.9709 8 382 GO:0003995
GO:0050660
AF-A0A536LMW5-F1-model_v4 Acyl-CoA dehydrogenase/oxidase N-terminal domain-containing protein 0.9552 5 244 GO:0016020
GO:0016627
GO:0050660
AF-A0A1H4R768-F1-model_v4 Acyl-CoA dehydrogenase 0.951 8 382 GO:0003995
GO:0050660
AF-A0A382XX97-F1-model_v4 Acyl-CoA dehydrogenase/oxidase N-terminal domain-containing protein 0.9371 5 147 GO:0016627
GO:0050660
AF-A0A1L6HUA2-F1-model_v4 Acyl-CoA dehydrogenase 0.9358 1 382 GO:0003995
GO:0033539
GO:0046359
GO:0050660

Map