F195361

General Info

Members Datasets Scaffolds Average Seq Length
145 89 290 234

Family's Representative Sequence

Representative Sequence 3300039450|Ga0436363_0312163|Ga0436363_0312163_750_1529
Length 259
Sequence MTITSPHNQRLKEIRKLRMRRRERDRAGRFVAEGEDLVAAADSAGWPALERYCATGSGLQGVEVEAKALAQASGLASGTRTLAVYEERWISPPLGPLCVYLHGVHDPGNVGALLRSAAAFGASCLVIGPGTADPFSPKAVRGSMGAVFSVALARHEGDVSGLPGTKIALLPGGGLPLSQLGAVLEPPVAGGWQKKVSEPGGGDGHQGVSLLIGSEREGLPEDVVAAADHTAHIPIVIESLNAAMAATVALYELSRMPGA

Samples

Sample ID Description Type Environment
1 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
4 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
12 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
17 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
18 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
22 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
23 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
26 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
29 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
30 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
31 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
32 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
33 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
44 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
45 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
46 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
47 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
48 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
54 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
55 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
56 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
57 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
58 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
59 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
60 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
61 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
62 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
63 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
64 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
65 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
66 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
69 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
70 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
71 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
72 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
75 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
76 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
77 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
78 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
79 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
80 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
81 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
82 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
83 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
84 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
85 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
86 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
87 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
88 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
89 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 9.66
Rhizosphere 73.79
Stem 0
Stem Tuber 0
Unclassified 3.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436363_0312163 3300039450 Bacteria 1657
2 Ga0068869_100084685 3300005334 Bacteria 2373
3 Ga0070692_10021806 3300005345 Bacteria 3121
4 Ga0070659_100356537 3300005366 Bacteria 1228
5 Ga0070713_100123632 3300005436 Bacteria 2273
6 Ga0070711_100369623 3300005439 Bacteria 1157
7 Ga0070663_100413418 3300005455 Bacteria 1105
8 Ga0070678_100286208 3300005456 Bacteria 1395
9 Ga0070665_100067112 3300005548 Bacteria 3598
10 Ga0068855_100868354 3300005563 Bacteria 955
11 Ga0068854_100161944 3300005578 Bacteria 1734
12 Ga0070702_100001778 3300005615 Bacteria 8955
13 Ga0068859_100223070 3300005617 Bacteria 1972
14 Ga0068859_100463686 3300005617 Bacteria 1363
15 Ga0081455_10134878 3300005937 Bacteria 1925
16 Ga0081538_10058965 3300005981 Bacteria 2222
17 Ga0070712_100482037 3300006175 Bacteria 1037
18 Ga0068865_100044035 3300006881 Bacteria 3053
19 Ga0068865_100454941 3300006881 Bacteria 1059
20 Ga0097620_100223066 3300006931 Bacteria 1972
21 Ga0097620_100463651 3300006931 Bacteria 1363
22 Ga0111539_10310374 3300009094 Bacteria 1835
23 Ga0111539_10751675 3300009094 Bacteria 1135
24 Ga0105245_10064363 3300009098 Bacteria 3313
25 Ga0105247_10057810 3300009101 Bacteria 2398
26 Ga0105242_10271411 3300009176 Bacteria 1537
27 Ga0105249_10464638 3300009553 Bacteria 1306
28 Ga0105239_10721452 3300010375 Bacteria 1140
29 Ga0157378_10029401 3300013297 Bacteria 4850
30 Ga0163162_10143934 3300013306 Bacteria 2498
31 Ga0163163_10755858 3300014325 Bacteria 1035
32 Ga0157380_10240105 3300014326 Bacteria 1633
33 Ga0157377_10459425 3300014745 Bacteria 881
34 Ga0157376_10224944 3300014969 Bacteria 1740
35 Ga0213876_10051850 3300021384 Bacteria 2168
36 Ga0213876_10123315 3300021384 Unclassified 1376
37 Ga0213875_10031465 3300021388 Bacteria 2510
38 Ga0213875_10065945 3300021388 Bacteria 1692
39 Ga0207688_10189413 3300025901 Bacteria 1230
40 Ga0207700_10303385 3300025928 Bacteria 1380
41 Ga0207700_10450765 3300025928 Bacteria 1134
42 Ga0207664_10172675 3300025929 Bacteria 1851
43 Ga0207664_10343482 3300025929 Bacteria 1320
44 Ga0207709_10299369 3300025935 Bacteria 1195
45 Ga0207704_10054824 3300025938 Bacteria 2433
46 Ga0207704_10422684 3300025938 Bacteria 1057
47 Ga0207677_10396094 3300026023 Bacteria 1170
48 Ga0207708_10008572 3300026075 Bacteria 7565
49 Ga0207675_100207569 3300026118 Bacteria 1883
50 Ga0207683_10180076 3300026121 Bacteria 1916
51 Ga0268266_10052408 3300028379 Bacteria 3504
52 Ga0307405_10032594 3300031731 Bacteria 3081
53 Ga0307405_10343720 3300031731 Bacteria 1148
54 Ga0307413_10094264 3300031824 Bacteria 1959
55 Ga0307410_10043137 3300031852 Bacteria 2987
56 Ga0307406_10005736 3300031901 Bacteria 6799
57 Ga0307407_10037519 3300031903 Bacteria 2678
58 Ga0307407_10056129 3300031903 Bacteria 2279
59 Ga0307412_10186511 3300031911 Bacteria 1565
60 Ga0307412_10194234 3300031911 Bacteria 1537
61 Ga0307409_100096371 3300031995 Bacteria 2440
62 Ga0307409_100096933 3300031995 Bacteria 2434
63 Ga0307409_100257917 3300031995 Bacteria 1598
64 Ga0307416_100020330 3300032002 Bacteria 4735
65 Ga0307416_100089226 3300032002 Bacteria 2639
66 Ga0307414_10054684 3300032004 Bacteria 2791
67 Ga0307415_100025670 3300032126 Bacteria 3702
68 Ga0307415_100108813 3300032126 Bacteria 2052
69 Ga0373932_0193988 3300035112 Bacteria 719
70 Ga0373937_0034175 3300036401 Bacteria 4624
71 Ga0395900_0008406 3300037418 Bacteria 10621
72 Ga0395900_0556000 3300037418 Bacteria 1092
73 Ga0395898_0000631 3300037466 Bacteria 64382
74 Ga0395898_0277008 3300037466 Bacteria 1600
75 Ga0395898_0521135 3300037466 Bacteria 1130
76 Ga0395905_0082352 3300037471 Bacteria 3016
77 Ga0436364_0046084 3300037853 Bacteria 1525
78 Ga0436364_0507893 3300037853 Bacteria 50699
79 Ga0436364_0539810 3300037853 Bacteria 7941
80 Ga0436364_1022123 3300037853 Bacteria 1720
81 Ga0436364_1247986 3300037853 Unclassified 830
82 Ga0395901_0014083 3300038443 Bacteria 8143
83 Ga0395901_0449456 3300038443 Bacteria 1318
84 Ga0436365_0052828 3300039437 Bacteria 10644
85 Ga0436365_0237209 3300039437 Bacteria 5944
86 Ga0436365_0642681 3300039437 Bacteria 2896
87 Ga0436365_0701602 3300039437 Bacteria 8240
88 Ga0436365_0849394 3300039437 Bacteria 2596
89 Ga0436365_1496480 3300039437 Bacteria 1486
90 Ga0436365_1666384 3300039437 Bacteria 2796
91 Ga0436360_1204956 3300039438 Bacteria 1275
92 Ga0436363_0171790 3300039450 Bacteria 923
93 Ga0436363_0174758 3300039450 Bacteria 1336
94 Ga0436363_0462307 3300039450 Unclassified 1332
95 Ga0436363_0469767 3300039450 Unclassified 996
96 Ga0436363_0603401 3300039450 Bacteria 1017
97 Ga0436363_1160224 3300039450 Bacteria 8611
98 Ga0436362_0569341 3300039453 Bacteria 1132
99 Ga0466969_0122350 3300044656 Bacteria 1211
100 Ga0466965_0227380 3300044683 Bacteria 996
101 Ga0466966_0047870 3300044684 Bacteria 2725
102 Ga0466966_0192094 3300044684 Bacteria 1237
103 Ga0466961_0044882 3300044693 Bacteria 2828
104 Ga0466963_0013930 3300044694 Bacteria 4952
105 Ga0466963_0305841 3300044694 Bacteria 1118
106 Ga0466963_0318696 3300044694 Unclassified 1094
107 Ga0466971_0114892 3300044719 Bacteria 1244
108 Ga0466971_0120704 3300044719 Bacteria 1213
109 Ga0466970_0305221 3300044765 Bacteria 898
110 Ga0466957_0024165 3300044842 Bacteria 3596
111 Ga0466959_0007719 3300045049 Bacteria 7559
112 Ga0466959_0011963 3300045049 Bacteria 6257
113 Ga0466959_0053012 3300045049 Bacteria 2967
114 Ga0466959_0270495 3300045049 Bacteria 1168
115 Ga0466958_0009091 3300045836 Bacteria 5522
116 Ga0466958_0025207 3300045836 Bacteria 3504
117 Ga0466958_0028840 3300045836 Bacteria 3293
118 Ga0466958_0300286 3300045836 Bacteria 1031
119 Ga0466967_0067396 3300045976 Bacteria 3192
120 Ga0466967_0096975 3300045976 Bacteria 2691
121 Ga0466967_0344420 3300045976 Bacteria 1442
122 Ga0495651_0261600 3300046462 Bacteria 1177
123 Ga0495608_0265533 3300046511 Bacteria 1068
124 Ga0495667_0383695 3300046559 Bacteria 886
125 Ga0496104_0011053 3300048907 Bacteria 8077
126 Ga0496105_0075676 3300048908 Bacteria 2780
127 Ga0496106_0441435 3300048909 Bacteria 1046
128 Ga0496107_0355587 3300048910 Bacteria 1090
129 Ga0496108_0116387 3300048911 Bacteria 2290
130 Ga0496108_0569317 3300048911 Bacteria 988
131 Ga0496109_0124321 3300048912 Bacteria 2404
132 Ga0496109_0129910 3300048912 Bacteria 2350
133 Ga0496109_0708006 3300048912 Bacteria 944
134 Ga0496112_0003570 3300048915 Bacteria 12924
135 Ga0496112_0038029 3300048915 Bacteria 4699
136 Ga0496112_0043262 3300048915 Bacteria 4409
137 Ga0496113_0212610 3300048916 Bacteria 1540
138 Ga0496113_0248369 3300048916 Bacteria 1420
139 Ga0496121_0045510 3300048924 Bacteria 3769
140 Ga0501040_0107369 3300049576 Bacteria 1951
141 Ga0495595_0125162 3300053084 Bacteria 1254
142 Ga0495619_0017468 3300053085 Bacteria 4542
143 Ga0466962_0037128 3300061719 Bacteria 2332
144 Ga0466962_0138578 3300061719 Bacteria 1178
145 Ga0466962_0180428 3300061719 Bacteria 1029
146 Ga0436363_0312163
147 Ga0068869_100084685
148 Ga0070692_10021806
149 Ga0070659_100356537
150 Ga0070713_100123632
151 Ga0070711_100369623
152 Ga0070663_100413418
153 Ga0070678_100286208
154 Ga0070665_100067112
155 Ga0068855_100868354
156 Ga0068854_100161944
157 Ga0070702_100001778
158 Ga0068859_100223070
159 Ga0068859_100463686
160 Ga0081455_10134878
161 Ga0081538_10058965
162 Ga0070712_100482037
163 Ga0068865_100044035
164 Ga0068865_100454941
165 Ga0097620_100223066
166 Ga0097620_100463651
167 Ga0111539_10310374
168 Ga0111539_10751675
169 Ga0105245_10064363
170 Ga0105247_10057810
171 Ga0105242_10271411
172 Ga0105249_10464638
173 Ga0105239_10721452
174 Ga0157378_10029401
175 Ga0163162_10143934
176 Ga0163163_10755858
177 Ga0157380_10240105
178 Ga0157377_10459425
179 Ga0157376_10224944
180 Ga0213876_10051850
181 Ga0213876_10123315
182 Ga0213875_10031465
183 Ga0213875_10065945
184 Ga0207688_10189413
185 Ga0207700_10303385
186 Ga0207700_10450765
187 Ga0207664_10172675
188 Ga0207664_10343482
189 Ga0207709_10299369
190 Ga0207704_10054824
191 Ga0207704_10422684
192 Ga0207677_10396094
193 Ga0207708_10008572
194 Ga0207675_100207569
195 Ga0207683_10180076
196 Ga0268266_10052408
197 Ga0307405_10032594
198 Ga0307405_10343720
199 Ga0307413_10094264
200 Ga0307410_10043137
201 Ga0307406_10005736
202 Ga0307407_10037519
203 Ga0307407_10056129
204 Ga0307412_10186511
205 Ga0307412_10194234
206 Ga0307409_100096371
207 Ga0307409_100096933
208 Ga0307409_100257917
209 Ga0307416_100020330
210 Ga0307416_100089226
211 Ga0307414_10054684
212 Ga0307415_100025670
213 Ga0307415_100108813
214 Ga0373932_0193988
215 Ga0373937_0034175
216 Ga0395900_0008406
217 Ga0395900_0556000
218 Ga0395898_0000631
219 Ga0395898_0277008
220 Ga0395898_0521135
221 Ga0395905_0082352
222 Ga0436364_0046084
223 Ga0436364_0507893
224 Ga0436364_0539810
225 Ga0436364_1022123
226 Ga0436364_1247986
227 Ga0395901_0014083
228 Ga0395901_0449456
229 Ga0436365_0052828
230 Ga0436365_0237209
231 Ga0436365_0642681
232 Ga0436365_0701602
233 Ga0436365_0849394
234 Ga0436365_1496480
235 Ga0436365_1666384
236 Ga0436360_1204956
237 Ga0436363_0171790
238 Ga0436363_0174758
239 Ga0436363_0462307
240 Ga0436363_0469767
241 Ga0436363_0603401
242 Ga0436363_1160224
243 Ga0436362_0569341
244 Ga0466969_0122350
245 Ga0466965_0227380
246 Ga0466966_0047870
247 Ga0466966_0192094
248 Ga0466961_0044882
249 Ga0466963_0013930
250 Ga0466963_0305841
251 Ga0466963_0318696
252 Ga0466971_0114892
253 Ga0466971_0120704
254 Ga0466970_0305221
255 Ga0466957_0024165
256 Ga0466959_0007719
257 Ga0466959_0011963
258 Ga0466959_0053012
259 Ga0466959_0270495
260 Ga0466958_0009091
261 Ga0466958_0025207
262 Ga0466958_0028840
263 Ga0466958_0300286
264 Ga0466967_0067396
265 Ga0466967_0096975
266 Ga0466967_0344420
267 Ga0495651_0261600
268 Ga0495608_0265533
269 Ga0495667_0383695
270 Ga0496104_0011053
271 Ga0496105_0075676
272 Ga0496106_0441435
273 Ga0496107_0355587
274 Ga0496108_0116387
275 Ga0496108_0569317
276 Ga0496109_0124321
277 Ga0496109_0129910
278 Ga0496109_0708006
279 Ga0496112_0003570
280 Ga0496112_0038029
281 Ga0496112_0043262
282 Ga0496113_0212610
283 Ga0496113_0248369
284 Ga0496121_0045510
285 Ga0501040_0107369
286 Ga0495595_0125162
287 Ga0495619_0017468
288 Ga0466962_0037128
289 Ga0466962_0138578
290 Ga0466962_0180428

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00588

SpoU_methylase

SpoU rRNA Methylase family

96

168

0.94

PF00588

SpoU_methylase

SpoU rRNA Methylase family

179

251

0.9

PF22435

MRM3-like_sub_bind

MRM3-like substrate binding domain

8

87

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qiu-assembly1.cif.gz_B ysga 23s rna methyltransferase from bacillus subtilis 0.9095 2 223
5l0z-assembly1.cif.gz_B crystal structure of adomet bound rrna methyltransferase from sinorhizobium meliloti 0.905 2 220
5kzk-assembly1.cif.gz_B crystal structure of rrna methyltransferase from sinorhizobium meliloti 0.8907 2 220
1x7p-assembly1.cif.gz_A crystal structure of the spou methyltransferase avirb from streptomyces viridochromogenes in complex with the cofactor adomet 0.8899 7 223
4x3m-assembly1.cif.gz_B crystal structure of ttha0275 from thermus thermophilus (hb8) in complex with adenosine in space group p212121 0.888 2 223
ID Description Score Start End Superfamily
af_P94978_97_258_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9513 88 223 3.40.1280.10
af_Q2FZE0_99_246_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9348 90 223 3.40.1280.10
af_P9WFY3_121_283_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9334 88 223 3.40.1280.10
2i6dA02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9107 82 220 3.40.1280.10
af_Q2FZE0_2_98_3.30.1330.30 Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;Ribosomal protein L30/S12 0.903 2 78 3.30.1330.30
ID Description Score Start End GO Terms
AF-A0A2T4UB69-F1-model_v4 Uncharacterized protein 0.9856 2 223 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-A0A537XA42-F1-model_v4 RNA methyltransferase 0.9672 2 224 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-J4ULG1-F1-model_v4 RNA methyltransferase, TrmH family 0.9433 2 223 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-A0A3E2Y1W6-F1-model_v4 deleted 0.9387 28 223
AF-A0A6L8JRR4-F1-model_v4 deleted 0.9384 1 223

Map