F194128

General Info

Members Datasets Scaffolds Average Seq Length
145 117 290 327

Family's Representative Sequence

Representative Sequence 3300005549|Ga0070704_100210698|Ga0070704_1002106982
Length 344
Sequence VTDKNLLGPWIRRFLLEYLVSDRYLARNTQMSYRDTLSLLITFISNHIPRAVDCLNVIDLSADGMKAFLTYLEEDRHCGKRTRNQRLAAIHAFAYFVAEKSPEHIAWCGEIRSIRCHRYERKLIPYLEKPEIDALIEAPDRSTSQGERDHALLLFLYNSGARASEAAQLMVSDLELALRSGKQAFVCINGKGGKKRKCPLWDSTTKALQELIEKNGNSHLFLNNHKQPLTRFGVHAVVKRYARKAAAVLPSLASQKVSPHTIRHTTATHLLRSGNDINTIRAWLGHVSIDTTNIYAETDLDMKVKALAACEILDQSDQKGWKQDKSLMEFLRKLGKKEDPNKDN

Samples

Sample ID Description Type Environment
1 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
4 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
5 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
30 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
33 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
34 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
35 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
46 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
47 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
48 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
49 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
50 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
51 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
52 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
53 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
54 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
55 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
58 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
59 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
60 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
61 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
62 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
63 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
64 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
65 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
66 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
69 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
70 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
71 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
72 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
73 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
74 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
75 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
76 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
77 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
78 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
79 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
80 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
81 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
82 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
83 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
86 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
87 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
88 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
89 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
90 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
91 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
92 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
93 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
94 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
95 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
96 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
97 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
98 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
104 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
105 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
106 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
107 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
110 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
112 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
113 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
114 3300053115 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 endosphere Metagenome Endosphere
115 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
116 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
117 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.31
Metatranscriptomes 0.69
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.45
Nodule 0
Rhizoplane 0.69
Rhizosphere 91.03
Stem 0
Stem Tuber 0
Unclassified 17.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070704_100210698 3300005549 Bacteria 1574
2 Ga0070689_100054678 3300005340 Bacteria 3091
3 Ga0070669_100013065 3300005353 Bacteria 5898
4 Ga0070673_100071073 3300005364 Bacteria 2795
5 Ga0070659_100226795 3300005366 Unclassified 1543
6 Ga0070714_100049929 3300005435 Bacteria 3561
7 Ga0070714_100225092 3300005435 Bacteria 1726
8 Ga0070713_100077676 3300005436 Bacteria 2824
9 Ga0070710_10013103 3300005437 Bacteria 4140
10 Ga0070708_100027331 3300005445 Bacteria 4895
11 Ga0070708_100032137 3300005445 Bacteria 4549
12 Ga0070678_100106391 3300005456 Bacteria 2186
13 Ga0070706_100022199 3300005467 Bacteria 5844
14 Ga0070706_100065884 3300005467 Bacteria 3350
15 Ga0070706_100122551 3300005467 Bacteria 2424
16 Ga0070706_100180744 3300005467 Bacteria 1969
17 Ga0070707_100054716 3300005468 Bacteria 3826
18 Ga0070707_100144626 3300005468 Bacteria 2314
19 Ga0070698_100359039 3300005471 Unclassified 1388
20 Ga0070699_100001429 3300005518 Bacteria 21940
21 Ga0070697_100135168 3300005536 Bacteria 2070
22 Ga0070693_100045849 3300005547 Bacteria 2480
23 Ga0070665_100211115 3300005548 Bacteria 1942
24 Ga0068864_100135403 3300005618 Bacteria 2218
25 Ga0070717_10016715 3300006028 Bacteria 5695
26 Ga0075433_10133207 3300006852 Bacteria 2208
27 Ga0075434_100165616 3300006871 Bacteria 2230
28 Ga0075436_100037517 3300006914 Bacteria 3346
29 Ga0099794_10007655 3300007265 Unclassified 4448
30 Ga0105240_10011614 3300009093 Bacteria 12250
31 Ga0105240_10285779 3300009093 Unclassified 1893
32 Ga0114129_10213765 3300009147 Plasmid 2605
33 Ga0105241_10001236 3300009174 Bacteria 19501
34 Ga0105241_10001554 3300009174 Bacteria 17580
35 Ga0105241_10273057 3300009174 Unclassified 1441
36 Ga0105248_10006551 3300009177 Bacteria 12767
37 Ga0105249_10424919 3300009553 Unclassified 1363
38 Ga0157374_10440008 3300013296 Unclassified 1304
39 Ga0157372_10167658 3300013307 Bacteria 2540
40 Ga0157372_10410712 3300013307 Bacteria 1578
41 Ga0163163_10708454 3300014325 Unclassified 1070
42 Ga0157376_10258636 3300014969 Bacteria 1630
43 Ga0213876_10016388 3300021384 Bacteria 3917
44 Ga0228598_1016302 3300024227 Bacteria 1466
45 Ga0207684_10021459 3300025910 Bacteria 5514
46 Ga0207684_10098169 3300025910 Bacteria 2501
47 Ga0207684_10154385 3300025910 Bacteria 1975
48 Ga0207654_10000033 3300025911 Bacteria 115194
49 Ga0207654_10001820 3300025911 Bacteria 11068
50 Ga0207695_10070927 3300025913 Bacteria 3560
51 Ga0207695_10470043 3300025913 Unclassified 1140
52 Ga0207646_10013440 3300025922 Bacteria 7830
53 Ga0207700_10063569 3300025928 Bacteria 2808
54 Ga0207664_10043825 3300025929 Bacteria 3502
55 Ga0207664_10294901 3300025929 Unclassified 1426
56 Ga0207712_10320979 3300025961 Unclassified 1278
57 Ga0207702_10502988 3300026078 Unclassified 1181
58 Ga0209588_1002953 3300027671 Unclassified 4673
59 Ga0268266_10219214 3300028379 Bacteria 1748
60 Ga0265760_10043238 3300031090 Bacteria 1346
61 Ga0307508_10176903 3300031616 Bacteria 1737
62 Ga0316579_10005483 3300031691 Bacteria 5125
63 Ga0265314_10018515 3300031711 Bacteria 5427
64 Ga0373946_0005817 3300035171 Bacteria 4461
65 Ga0316574_0054655 3300035398 Bacteria 2494
66 Ga0373924_0004085 3300035410 Bacteria 5075
67 Ga0373935_0000099 3300035692 Bacteria 38461
68 Ga0373947_0023951 3300035725 Bacteria 3555
69 Ga0373947_0060969 3300035725 Bacteria 2291
70 Ga0373937_0162328 3300036401 Bacteria 2095
71 Ga0316582_0040548 3300036647 Bacteria 2906
72 Ga0316584_0120661 3300036712 Bacteria 1959
73 Ga0373925_0012676 3300037068 Bacteria 6104
74 Ga0373925_0019274 3300037068 Bacteria 4961
75 Ga0316581_0049949 3300037588 Bacteria 1281
76 Ga0400484_24161 3300038725 Bacteria 3671
77 Ga0400488_26287 3300038741 Unclassified 2809
78 Ga0400488_41467 3300038741 Bacteria 5433
79 Ga0400487_07658 3300039110 Bacteria 5415
80 Ga0436360_0044937 3300039438 Bacteria 1332
81 Ga0436360_1352900 3300039438 Unclassified 4212
82 Ga0436361_0165327 3300039447 Bacteria 2472
83 Ga0436363_0243209 3300039450 Archaea 1362
84 Ga0436362_1274431 3300039453 Unclassified 1101
85 Ga0466969_0004412 3300044656 Bacteria 7486
86 Ga0466967_0109467 3300045976 Bacteria 2536
87 Ga0495603_0000166 3300046455 Bacteria 33293
88 Ga0495603_0025559 3300046455 Bacteria 3571
89 Ga0495629_0005528 3300046459 Bacteria 9432
90 Ga0495629_0255387 3300046459 Bacteria 1205
91 Ga0495653_0041544 3300046463 Bacteria 3589
92 Ga0495580_0001399 3300046472 Bacteria 21176
93 Ga0495580_0033685 3300046472 Bacteria 3689
94 Ga0495580_0190357 3300046472 Bacteria 1415
95 Ga0495582_0029073 3300046473 Bacteria 3034
96 Ga0495582_0220034 3300046473 Bacteria 1086
97 Ga0495662_0086789 3300046476 Unclassified 1524
98 Ga0495664_0023868 3300046477 Bacteria 3551
99 Ga0495585_0003171 3300046492 Bacteria 11255
100 Ga0495594_0036473 3300046499 Bacteria 2681
101 Ga0495628_0271456 3300046516 Bacteria 1261
102 Ga0495630_0034961 3300046517 Bacteria 3754
103 Ga0495652_0147701 3300046529 Bacteria 1840
104 Ga0495665_0016085 3300046531 Bacteria 4031
105 Ga0495665_0019344 3300046531 Bacteria 3661
106 Ga0495640_0190638 3300046533 Bacteria 1303
107 Ga0495586_0016894 3300046535 Bacteria 3881
108 Ga0495587_0025845 3300046536 Bacteria 3585
109 Ga0495645_0026630 3300046543 Bacteria 4198
110 Ga0495645_0035636 3300046543 Bacteria 3627
111 Ga0495645_0207984 3300046543 Unclassified 1323
112 Ga0495668_0023178 3300046616 Bacteria 3543
113 Ga0495635_0217399 3300046663 Bacteria 1293
114 Ga0495646_0027208 3300046680 Bacteria 3588
115 Ga0495647_0029667 3300046681 Bacteria 2024
116 Ga0495613_0136409 3300046689 Bacteria 1755
117 Ga0495624_0029351 3300046690 Bacteria 3588
118 Ga0495649_0081049 3300046694 Bacteria 1735
119 Ga0495581_0023867 3300047315 Bacteria 3544
120 Ga0495604_0163652 3300047317 Bacteria 1570
121 Ga0495674_0074991 3300047319 Bacteria 2911
122 Ga0495676_0045188 3300047321 Bacteria 3587
123 Ga0495680_0125033 3300047322 Bacteria 1895
124 Ga0495675_0162146 3300047444 Bacteria 1376
125 Ga0495602_0028496 3300048088 Bacteria 5342
126 Ga0496102_0087611 3300048905 Bacteria 2877
127 Ga0501033_0042628 3300049570 Bacteria 3383
128 Ga0501037_0067347 3300049573 Bacteria 2607
129 Ga0501038_0040977 3300049574 Bacteria 4041
130 Ga0501067_0085888 3300049583 Bacteria 1746
131 Ga0501069_0023150 3300049585 Bacteria 3385
132 Ga0501070_0238916 3300049586 Unclassified 1487
133 Ga0501073_0042172 3300049589 Bacteria 3222
134 Ga0501035_0286972 3300049822 Unclassified 1390
135 nmdc:mga05p37_373742_c1 3300050507 Unclassified 1672
136 nmdc:mga05p37_603744_c1 3300050507 Bacteria 1238
137 nmdc:mga06r32_491888_c1 3300050510 Unclassified 1204
138 nmdc:mga08x19_868_c1 3300050514 Bacteria 19184
139 nmdc:mga0a205_18959_c2 3300050515 Bacteria 5268
140 Ga0495619_0031000 3300053085 Bacteria 3463
141 Ga0500583_0000221 3300053092 Bacteria 21062
142 Ga0500591_034083 3300053115 Unclassified 2448
143 Ga0500559_0035819 3300053136 Unclassified 2145
144 Ga0500639_018638 3300053163 Unclassified 3664
145 Ga0500637_0021017 3300053178 Bacteria 3543
146 Ga0070704_100210698
147 Ga0070689_100054678
148 Ga0070669_100013065
149 Ga0070673_100071073
150 Ga0070659_100226795
151 Ga0070714_100049929
152 Ga0070714_100225092
153 Ga0070713_100077676
154 Ga0070710_10013103
155 Ga0070708_100027331
156 Ga0070708_100032137
157 Ga0070678_100106391
158 Ga0070706_100022199
159 Ga0070706_100065884
160 Ga0070706_100122551
161 Ga0070706_100180744
162 Ga0070707_100054716
163 Ga0070707_100144626
164 Ga0070698_100359039
165 Ga0070699_100001429
166 Ga0070697_100135168
167 Ga0070693_100045849
168 Ga0070665_100211115
169 Ga0068864_100135403
170 Ga0070717_10016715
171 Ga0075433_10133207
172 Ga0075434_100165616
173 Ga0075436_100037517
174 Ga0099794_10007655
175 Ga0105240_10011614
176 Ga0105240_10285779
177 Ga0114129_10213765
178 Ga0105241_10001236
179 Ga0105241_10001554
180 Ga0105241_10273057
181 Ga0105248_10006551
182 Ga0105249_10424919
183 Ga0157374_10440008
184 Ga0157372_10167658
185 Ga0157372_10410712
186 Ga0163163_10708454
187 Ga0157376_10258636
188 Ga0213876_10016388
189 Ga0228598_1016302
190 Ga0207684_10021459
191 Ga0207684_10098169
192 Ga0207684_10154385
193 Ga0207654_10000033
194 Ga0207654_10001820
195 Ga0207695_10070927
196 Ga0207695_10470043
197 Ga0207646_10013440
198 Ga0207700_10063569
199 Ga0207664_10043825
200 Ga0207664_10294901
201 Ga0207712_10320979
202 Ga0207702_10502988
203 Ga0209588_1002953
204 Ga0268266_10219214
205 Ga0265760_10043238
206 Ga0307508_10176903
207 Ga0316579_10005483
208 Ga0265314_10018515
209 Ga0373946_0005817
210 Ga0316574_0054655
211 Ga0373924_0004085
212 Ga0373935_0000099
213 Ga0373947_0023951
214 Ga0373947_0060969
215 Ga0373937_0162328
216 Ga0316582_0040548
217 Ga0316584_0120661
218 Ga0373925_0012676
219 Ga0373925_0019274
220 Ga0316581_0049949
221 Ga0400484_24161
222 Ga0400488_26287
223 Ga0400488_41467
224 Ga0400487_07658
225 Ga0436360_0044937
226 Ga0436360_1352900
227 Ga0436361_0165327
228 Ga0436363_0243209
229 Ga0436362_1274431
230 Ga0466969_0004412
231 Ga0466967_0109467
232 Ga0495603_0000166
233 Ga0495603_0025559
234 Ga0495629_0005528
235 Ga0495629_0255387
236 Ga0495653_0041544
237 Ga0495580_0001399
238 Ga0495580_0033685
239 Ga0495580_0190357
240 Ga0495582_0029073
241 Ga0495582_0220034
242 Ga0495662_0086789
243 Ga0495664_0023868
244 Ga0495585_0003171
245 Ga0495594_0036473
246 Ga0495628_0271456
247 Ga0495630_0034961
248 Ga0495652_0147701
249 Ga0495665_0016085
250 Ga0495665_0019344
251 Ga0495640_0190638
252 Ga0495586_0016894
253 Ga0495587_0025845
254 Ga0495645_0026630
255 Ga0495645_0035636
256 Ga0495645_0207984
257 Ga0495668_0023178
258 Ga0495635_0217399
259 Ga0495646_0027208
260 Ga0495647_0029667
261 Ga0495613_0136409
262 Ga0495624_0029351
263 Ga0495649_0081049
264 Ga0495581_0023867
265 Ga0495604_0163652
266 Ga0495674_0074991
267 Ga0495676_0045188
268 Ga0495680_0125033
269 Ga0495675_0162146
270 Ga0495602_0028496
271 Ga0496102_0087611
272 Ga0501033_0042628
273 Ga0501037_0067347
274 Ga0501038_0040977
275 Ga0501067_0085888
276 Ga0501069_0023150
277 Ga0501070_0238916
278 Ga0501073_0042172
279 Ga0501035_0286972
280 nmdc:mga05p37_373742_c1
281 nmdc:mga05p37_603744_c1
282 nmdc:mga06r32_491888_c1
283 nmdc:mga08x19_868_c1
284 nmdc:mga0a205_18959_c2
285 Ga0495619_0031000
286 Ga0500583_0000221
287 Ga0500591_034083
288 Ga0500559_0035819
289 Ga0500639_018638
290 Ga0500637_0021017

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00589

Phage_integrase

Phage integrase family

125

301

0.93

PF02899

Phage_int_SAM_1

Phage integrase, N-terminal SAM-like domain

11

100

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
5c6k-assembly1.cif.gz_B bacteriophage p2 integrase catalytic domain 0.7942 125 299
1ae9-assembly1.cif.gz_B structure of the lambda integrase catalytic core 0.7787 125 288
5dor-assembly1.cif.gz_A p2 integrase catalytic domain in space group p21 0.7766 125 299
1ae9-assembly1.cif.gz_A structure of the lambda integrase catalytic core 0.7706 125 288
1ae9-assembly1.cif.gz_B structure of the lambda integrase catalytic core 0.7404 125 288
ID Description Score Start End Superfamily
af_Q2FY74_109_289_1.10.443.10 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.8755 125 309 1.10.443.10
af_P0A8P6_113_288_1.10.443.10 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.8708 128 309 1.10.443.10
af_Q2FY74_109_289_1.10.443.10 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.8662 125 309 1.10.443.10
af_P0A8P6_113_288_1.10.443.10 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.8518 128 309 1.10.443.10
af_Q2FZ30_110_286_1.10.443.10 Mainly Alpha;Orthogonal Bundle;hpI Integrase; Chain A;Intergrase catalytic core 0.8418 127 309 1.10.443.10
ID Description Score Start End GO Terms
AF-A0A3S1QYG6-F1-model_v4 Integrase 0.9782 1 110 GO:0003677
GO:0015074
AF-A3JFA6-F1-model_v4 Phage-related integrase 0.9747 8 115 GO:0003677
GO:0015074
AF-X1HIT4-F1-model_v4 Core-binding (CB) domain-containing protein 0.9742 29 115 GO:0003677
GO:0015074
AF-A0A7W0Q968-F1-model_v4 Site-specific integrase 0.974 5 121 GO:0003677
GO:0015074
AF-A0A7X8GKJ6-F1-model_v4 Site-specific integrase 0.9727 7 124 GO:0003677
GO:0015074

Map