F192397

General Info

Members Datasets Scaffolds Average Seq Length
144 89 144 333

Family's Representative Sequence

Representative Sequence 3300038443|Ga0395901_0267633|Ga0395901_0267633_151_1152
Length 316
Sequence MIVIGVDVHKHELTAVAVDELGRWSGPLAAELCAWARSLDQTRLWALEDCRHVSRGLERLLAAASEGLVRVPPRLTAPQRRRGRTRGKSDRIDALAIARAALQEPNLDRPRAGEERLRELKLLVDHRDDLVAERRRAQQRLRWHLHELDPALAVPLGALDRSCWLDRLGRRLARREQTTQVRIARDLLARCRSLSRSIVLELAGCGALSAAKLLCEIGPIERFASDAQLARHAGVAPLEASSGKQRRHRLDRGGNRQLNCALHRIAVTQGRVYPPARAYLERKQGEGKSRREALRCLKRQLARTVYTTLKSERSLT

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
15 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
16 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
18 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
19 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
20 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
21 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
31 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
32 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
33 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
34 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
35 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
36 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
37 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
38 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
39 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
40 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
41 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
42 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
43 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
44 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
45 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
46 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
47 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
48 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
49 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
50 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
51 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
52 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
53 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
54 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
55 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
56 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
57 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
58 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
59 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
60 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
61 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
62 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
63 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
64 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
65 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
66 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
67 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
68 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
69 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
70 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
71 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
72 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
73 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
74 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
75 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
76 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
77 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
78 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
79 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
80 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
81 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
82 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
83 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
84 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
85 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
86 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
87 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
88 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
89 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.94
Rhizosphere 92.36
Stem 0
Stem Tuber 0
Unclassified 0.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10019671 3300003323 Plasmid 3063
2 Ga0070682_100222350 3300005337 Bacteria 1345
3 Ga0070714_100274785 3300005435 Unclassified 1563
4 Ga0070694_100238276 3300005444 Bacteria 1371
5 Ga0070708_100284461 3300005445 Bacteria 1556
6 Ga0070708_100382229 3300005445 Bacteria 1328
7 Ga0070706_100265082 3300005467 Bacteria 1603
8 Ga0070706_100437960 3300005467 Unclassified 1217
9 Ga0070707_100255648 3300005468 Bacteria 1704
10 Ga0070698_100108724 3300005471 Bacteria 2739
11 Ga0070698_100110414 3300005471 Bacteria 2715
12 Ga0070698_100143228 3300005471 Bacteria 2340
13 Ga0070698_100259349 3300005471 Unclassified 1670
14 Ga0070698_100500872 3300005471 Bacteria 1152
15 Ga0070699_100155948 3300005518 Bacteria 2020
16 Ga0070699_100202046 3300005518 Bacteria 1767
17 Ga0070679_100259581 3300005530 Bacteria 1693
18 Ga0070679_100274917 3300005530 Bacteria 1638
19 Ga0070695_100192407 3300005545 Bacteria 1453
20 Ga0070704_100122771 3300005549 Bacteria 1999
21 Ga0081455_10082036 3300005937 Bacteria 2639
22 Ga0081455_10117307 3300005937 Unclassified 2104
23 Ga0070716_100109706 3300006173 Unclassified 1708
24 Ga0070712_100383198 3300006175 Bacteria 1158
25 Ga0114129_10586441 3300009147 Bacteria 1446
26 Ga0114129_10656793 3300009147 Bacteria 1353
27 Ga0157370_10243955 3300013104 Bacteria 1662
28 Ga0157369_10349093 3300013105 Bacteria 1537
29 Ga0182008_10116673 3300014497 Bacteria 1325
30 Ga0182005_1042547 3300015265 Bacteria 1235
31 Ga0207692_10160411 3300025898 Unclassified 1295
32 Ga0207699_10228269 3300025906 Unclassified 1274
33 Ga0207684_10206504 3300025910 Bacteria 1694
34 Ga0207671_10191582 3300025914 Bacteria 1595
35 Ga0207693_10404574 3300025915 Bacteria 1067
36 Ga0207657_10232529 3300025919 Bacteria 1474
37 Ga0207646_10196965 3300025922 Bacteria 1819
38 Ga0207646_10348984 3300025922 Bacteria 1337
39 Ga0207700_10359008 3300025928 Unclassified 1270
40 Ga0207664_10180752 3300025929 Bacteria 1811
41 Ga0265334_10071040 3300028573 Bacteria 1296
42 Ga0265324_10032662 3300029957 Bacteria 1817
43 Ga0395899_0004792 3300037312 Bacteria 10540
44 Ga0395899_0038632 3300037312 Bacteria 3575
45 Ga0395899_0087931 3300037312 Unclassified 2255
46 Ga0395899_0184439 3300037312 Bacteria 1463
47 Ga0395900_0022941 3300037418 Bacteria 6386
48 Ga0395900_0026273 3300037418 Bacteria 5962
49 Ga0395900_0029376 3300037418 Bacteria 5640
50 Ga0395900_0386243 3300037418 Bacteria 1367
51 Ga0395900_0438856 3300037418 Bacteria 1263
52 Ga0395898_0014652 3300037466 Bacteria 8051
53 Ga0395898_0047494 3300037466 Bacteria 4213
54 Ga0395898_0115313 3300037466 Bacteria 2574
55 Ga0395898_0152541 3300037466 Bacteria 2210
56 Ga0395898_0194020 3300037466 Bacteria 1940
57 Ga0395905_0016159 3300037471 Bacteria 7094
58 Ga0395905_0044840 3300037471 Bacteria 4148
59 Ga0395905_0108373 3300037471 Bacteria 2607
60 Ga0395905_0414549 3300037471 Bacteria 1242
61 Ga0395905_0469277 3300037471 Unclassified 1157
62 Ga0395901_0019312 3300038443 Bacteria 6967
63 Ga0395901_0053817 3300038443 Bacteria 4182
64 Ga0395901_0059982 3300038443 Bacteria 3958
65 Ga0395901_0148416 3300038443 Bacteria 2464
66 Ga0395901_0166721 3300038443 Bacteria 2312
67 Ga0395901_0267633 3300038443 Bacteria 1778
68 Ga0395901_0279838 3300038443 Bacteria 1733
69 Ga0395901_0285597 3300038443 Bacteria 1713
70 Ga0395901_0378020 3300038443 Bacteria 1458
71 Ga0439453_0001479 3300041408 Bacteria 3033
72 Ga0451802_1606925 3300041460 Unclassified 1904
73 Ga0439451_015808 3300042009 Bacteria 1521
74 Ga0439454_004254 3300042011 Bacteria 1638
75 Ga0466961_0016210 3300044693 Plasmid 4784
76 Ga0466963_0202599 3300044694 Bacteria 1388
77 Ga0466964_0091151 3300044706 Bacteria 1326
78 Ga0466971_0029242 3300044719 Unclassified 2464
79 Ga0466958_0079031 3300045836 Unclassified 2022
80 Ga0466967_0021141 3300045976 Bacteria 5276
81 Ga0466967_0298081 3300045976 Bacteria 1550
82 Ga0466967_0341493 3300045976 Bacteria 1448
83 Ga0495592_0236897 3300046454 Bacteria 1213
84 Ga0495603_0128877 3300046455 Unclassified 1474
85 Ga0495629_0094147 3300046459 Unclassified 2090
86 Ga0495629_0169076 3300046459 Bacteria 1518
87 Ga0495641_0016093 3300046461 Plasmid 3952
88 Ga0495582_0052737 3300046473 Unclassified 2242
89 Ga0495605_0056887 3300046474 Bacteria 1885
90 Ga0495639_0082222 3300046475 Unclassified 1501
91 Ga0495664_0116179 3300046477 Bacteria 1617
92 Ga0495664_0158460 3300046477 Bacteria 1373
93 Ga0495608_0159198 3300046511 Bacteria 1436
94 Ga0495618_0123926 3300046514 Bacteria 1655
95 Ga0495628_0028638 3300046516 Bacteria 4523
96 Ga0495628_0150152 3300046516 Bacteria 1775
97 Ga0495666_0122704 3300046526 Unclassified 1216
98 Ga0495652_0181227 3300046529 Bacteria 1616
99 Ga0495652_0228561 3300046529 Bacteria 1393
100 Ga0495665_0132922 3300046531 Unclassified 1302
101 Ga0495640_0171045 3300046533 Bacteria 1388
102 Ga0495667_0001444 3300046559 Bacteria 15650
103 Ga0495667_0134704 3300046559 Unclassified 1593
104 Ga0495667_0161992 3300046559 Bacteria 1439
105 Ga0495667_0183707 3300046559 Bacteria 1341
106 Ga0495656_0144623 3300046615 Bacteria 1143
107 Ga0495634_0042652 3300046642 Bacteria 3077
108 Ga0495634_0047484 3300046642 Bacteria 2892
109 Ga0495635_0225269 3300046663 Bacteria 1267
110 Ga0495657_0083493 3300046675 Bacteria 2062
111 Ga0495658_0082189 3300046683 Unclassified 1892
112 Ga0495658_0249224 3300046683 Bacteria 1117
113 Ga0495613_0060990 3300046689 Bacteria 2762
114 Ga0495589_0054844 3300046794 Bacteria 1965
115 Ga0495600_0004340 3300046809 Bacteria 8484
116 Ga0495581_0052902 3300047315 Unclassified 2345
117 Ga0495604_0208767 3300047317 Unclassified 1350
118 Ga0495674_0225384 3300047319 Bacteria 1548
119 Ga0495674_0322842 3300047319 Bacteria 1257
120 Ga0495680_0112528 3300047322 Bacteria 2016
121 Ga0495593_0025730 3300047673 Bacteria 3256
122 Ga0495593_0112713 3300047673 Bacteria 1388
123 Ga0495602_0178706 3300048088 Unclassified 1639
124 Ga0495602_0247074 3300048088 Unclassified 1332
125 Ga0496102_0300574 3300048905 Bacteria 1512
126 Ga0496103_0103869 3300048906 Bacteria 1800
127 Ga0496103_0182567 3300048906 Bacteria 1348
128 Ga0496103_0192506 3300048906 Unclassified 1311
129 Ga0496106_0142579 3300048909 Bacteria 1885
130 Ga0496106_0161669 3300048909 Bacteria 1771
131 Ga0496109_0082376 3300048912 Bacteria 2965
132 Ga0496110_0385113 3300048913 Bacteria 1278
133 Ga0496111_0172083 3300048914 Bacteria 1609
134 Ga0501067_0023931 3300049583 Bacteria 3386
135 Ga0501069_0118039 3300049585 Bacteria 1514
136 nmdc:mga05p37_129818_c1 3300050507 Bacteria 3092
137 Ga0495601_0150097 3300053077 Bacteria 1521
138 Ga0495601_0154078 3300053077 Bacteria 1501
139 Ga0495612_0042360 3300053078 Bacteria 1858
140 Ga0495619_0003192 3300053085 Bacteria 10620
141 Ga0495619_0165969 3300053085 Bacteria 1526
142 Ga0495619_0259297 3300053085 Bacteria 1205
143 Ga0495619_0387120 3300053085 Bacteria 966
144 Ga0466962_0002045 3300061719 Bacteria 9540

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053085 Ga0495619_0387120 Ga0495619_0387120_53_886 277
2 3300037471 Ga0395905_0108373 Ga0395905_0108373_1745_2590 281
3 3300053077 Ga0495601_0150097 Ga0495601_0150097_531_1508 285
4 3300025915 Ga0207693_10404574 Ga0207693_104045741 289
5 3300046516 Ga0495628_0028638 Ga0495628_0028638_2480_3493 297
6 3300046559 Ga0495667_0001444 Ga0495667_0001444_14101_15114 297
7 3300046642 Ga0495634_0047484 Ga0495634_0047484_1834_2847 297
8 3300046809 Ga0495600_0004340 Ga0495600_0004340_14_1027 297
9 3300053085 Ga0495619_0003192 Ga0495619_0003192_9476_10489 297
10 3300045976 Ga0466967_0021141 Ga0466967_0021141_4184_5104 306
11 3300045976 Ga0466967_0341493 Ga0466967_0341493_21_968 314
12 3300038443 Ga0395901_0267633 Ga0395901_0267633_151_1152 316
13 3300048906 Ga0496103_0192506 Ga0496103_0192506_60_1082 319
14 3300037418 Ga0395900_0386243 Ga0395900_0386243_22_1035 320
15 3300038443 Ga0395901_0166721 Ga0395901_0166721_109_1122 320
16 3300038443 Ga0395901_0279838 Ga0395901_0279838_617_1636 320
17 3300047673 Ga0495593_0112713 Ga0495593_0112713_31_996 320
18 3300044693 Ga0466961_0016210 Ga0466961_0016210_36_1049 321
19 3300044719 Ga0466971_0029242 Ga0466971_0029242_651_1664 321
20 3300045836 Ga0466958_0079031 Ga0466958_0079031_977_1990 321
21 3300061719 Ga0466962_0002045 Ga0466962_0002045_1962_2975 321
22 3300005444 Ga0070694_100238276 Ga0070694_1002382762 324
23 3300005530 Ga0070679_100274917 Ga0070679_1002749171 324
24 3300005545 Ga0070695_100192407 Ga0070695_1001924071 324
25 3300005549 Ga0070704_100122771 Ga0070704_1001227712 324
26 3300048905 Ga0496102_0300574 Ga0496102_0300574_43_1056 324
27 3300048906 Ga0496103_0103869 Ga0496103_0103869_21_1034 324
28 3300048909 Ga0496106_0142579 Ga0496106_0142579_466_1479 324
29 3300048914 Ga0496111_0172083 Ga0496111_0172083_336_1349 324
30 3300041460 Ga0451802_1606925 Ga0451802_1606925_763_1788 327
31 3300046615 Ga0495656_0144623 Ga0495656_0144623_34_1026 329
32 3300037312 Ga0395899_0087931 Ga0395899_0087931_1184_2197 332
33 3300037312 Ga0395899_0038632 Ga0395899_0038632_2412_3425 333
34 3300037312 Ga0395899_0184439 Ga0395899_0184439_58_1227 333
35 3300037418 Ga0395900_0029376 Ga0395900_0029376_3361_4374 333
36 3300037466 Ga0395898_0047494 Ga0395898_0047494_865_1878 333
37 3300037471 Ga0395905_0044840 Ga0395905_0044840_2124_3137 333
38 3300038443 Ga0395901_0053817 Ga0395901_0053817_2305_3318 333
39 3300046683 Ga0495658_0249224 Ga0495658_0249224_76_1086 335
40 3300005467 Ga0070706_100265082 Ga0070706_1002650822 336
41 3300009147 Ga0114129_10656793 Ga0114129_106567931 336
42 3300003323 rootH1_10019671 rootH1_100196715 337
43 3300005337 Ga0070682_100222350 Ga0070682_1002223501 337
44 3300005435 Ga0070714_100274785 Ga0070714_1002747851 337
45 3300005445 Ga0070708_100284461 Ga0070708_1002844612 337
46 3300005445 Ga0070708_100382229 Ga0070708_1003822291 337
47 3300005467 Ga0070706_100437960 Ga0070706_1004379601 337
48 3300005468 Ga0070707_100255648 Ga0070707_1002556481 337
49 3300005471 Ga0070698_100108724 Ga0070698_1001087245 337
50 3300005471 Ga0070698_100110414 Ga0070698_1001104144 337
51 3300005471 Ga0070698_100143228 Ga0070698_1001432282 337
52 3300005471 Ga0070698_100259349 Ga0070698_1002593492 337
53 3300005471 Ga0070698_100500872 Ga0070698_1005008721 337
54 3300005518 Ga0070699_100155948 Ga0070699_1001559481 337
55 3300005518 Ga0070699_100202046 Ga0070699_1002020463 337
56 3300005530 Ga0070679_100259581 Ga0070679_1002595811 337
57 3300005937 Ga0081455_10082036 Ga0081455_100820361 337
58 3300005937 Ga0081455_10117307 Ga0081455_101173072 337
59 3300006173 Ga0070716_100109706 Ga0070716_1001097061 337
60 3300006175 Ga0070712_100383198 Ga0070712_1003831981 337
61 3300009147 Ga0114129_10586441 Ga0114129_105864411 337
62 3300013104 Ga0157370_10243955 Ga0157370_102439552 337
63 3300013105 Ga0157369_10349093 Ga0157369_103490932 337
64 3300014497 Ga0182008_10116673 Ga0182008_101166732 337
65 3300015265 Ga0182005_1042547 Ga0182005_10425471 337
66 3300025898 Ga0207692_10160411 Ga0207692_101604111 337
67 3300025906 Ga0207699_10228269 Ga0207699_102282691 337
68 3300025910 Ga0207684_10206504 Ga0207684_102065041 337
69 3300025914 Ga0207671_10191582 Ga0207671_101915822 337
70 3300025919 Ga0207657_10232529 Ga0207657_102325292 337
71 3300025922 Ga0207646_10196965 Ga0207646_101969652 337
72 3300025922 Ga0207646_10348984 Ga0207646_103489841 337
73 3300025928 Ga0207700_10359008 Ga0207700_103590081 337
74 3300025929 Ga0207664_10180752 Ga0207664_101807522 337
75 3300028573 Ga0265334_10071040 Ga0265334_100710401 337
76 3300029957 Ga0265324_10032662 Ga0265324_100326622 337
77 3300037312 Ga0395899_0004792 Ga0395899_0004792_158_1171 337
78 3300037418 Ga0395900_0022941 Ga0395900_0022941_5152_6165 337
79 3300037418 Ga0395900_0026273 Ga0395900_0026273_84_1097 337
80 3300037418 Ga0395900_0438856 Ga0395900_0438856_226_1239 337
81 3300037466 Ga0395898_0014652 Ga0395898_0014652_195_1208 337
82 3300037466 Ga0395898_0115313 Ga0395898_0115313_1302_2333 337
83 3300037466 Ga0395898_0152541 Ga0395898_0152541_1018_2031 337
84 3300037466 Ga0395898_0194020 Ga0395898_0194020_296_1309 337
85 3300037471 Ga0395905_0016159 Ga0395905_0016159_219_1232 337
86 3300037471 Ga0395905_0414549 Ga0395905_0414549_31_1044 337
87 3300037471 Ga0395905_0469277 Ga0395905_0469277_89_1102 337
88 3300038443 Ga0395901_0019312 Ga0395901_0019312_5715_6728 337
89 3300038443 Ga0395901_0059982 Ga0395901_0059982_190_1221 337
90 3300038443 Ga0395901_0148416 Ga0395901_0148416_1218_2231 337
91 3300038443 Ga0395901_0285597 Ga0395901_0285597_306_1319 337
92 3300038443 Ga0395901_0378020 Ga0395901_0378020_230_1243 337
93 3300041408 Ga0439453_0001479 Ga0439453_0001479_1084_2097 337
94 3300042009 Ga0439451_015808 Ga0439451_015808_198_1211 337
95 3300042011 Ga0439454_004254 Ga0439454_004254_289_1302 337
96 3300044694 Ga0466963_0202599 Ga0466963_0202599_222_1235 337
97 3300044706 Ga0466964_0091151 Ga0466964_0091151_279_1292 337
98 3300045976 Ga0466967_0298081 Ga0466967_0298081_108_1121 337
99 3300046454 Ga0495592_0236897 Ga0495592_0236897_173_1186 337
100 3300046455 Ga0495603_0128877 Ga0495603_0128877_358_1371 337
101 3300046459 Ga0495629_0094147 Ga0495629_0094147_94_1110 337
102 3300046459 Ga0495629_0169076 Ga0495629_0169076_334_1347 337
103 3300046461 Ga0495641_0016093 Ga0495641_0016093_823_1839 337
104 3300046473 Ga0495582_0052737 Ga0495582_0052737_1047_2063 337
105 3300046474 Ga0495605_0056887 Ga0495605_0056887_431_1513 337
106 3300046475 Ga0495639_0082222 Ga0495639_0082222_235_1251 337
107 3300046477 Ga0495664_0116179 Ga0495664_0116179_208_1242 337
108 3300046477 Ga0495664_0158460 Ga0495664_0158460_155_1171 337
109 3300046511 Ga0495608_0159198 Ga0495608_0159198_52_1068 337
110 3300046514 Ga0495618_0123926 Ga0495618_0123926_87_1118 337
111 3300046516 Ga0495628_0150152 Ga0495628_0150152_197_1231 337
112 3300046526 Ga0495666_0122704 Ga0495666_0122704_159_1175 337
113 3300046529 Ga0495652_0181227 Ga0495652_0181227_155_1189 337
114 3300046529 Ga0495652_0228561 Ga0495652_0228561_303_1319 337
115 3300046531 Ga0495665_0132922 Ga0495665_0132922_35_1051 337
116 3300046533 Ga0495640_0171045 Ga0495640_0171045_250_1266 337
117 3300046559 Ga0495667_0134704 Ga0495667_0134704_131_1147 337
118 3300046559 Ga0495667_0161992 Ga0495667_0161992_98_1114 337
119 3300046559 Ga0495667_0183707 Ga0495667_0183707_219_1235 337
120 3300046642 Ga0495634_0042652 Ga0495634_0042652_220_1236 337
121 3300046663 Ga0495635_0225269 Ga0495635_0225269_11_1027 337
122 3300046675 Ga0495657_0083493 Ga0495657_0083493_608_1624 337
123 3300046683 Ga0495658_0082189 Ga0495658_0082189_254_1270 337
124 3300046689 Ga0495613_0060990 Ga0495613_0060990_804_1820 337
125 3300046794 Ga0495589_0054844 Ga0495589_0054844_805_1818 337
126 3300047315 Ga0495581_0052902 Ga0495581_0052902_779_1795 337
127 3300047317 Ga0495604_0208767 Ga0495604_0208767_91_1107 337
128 3300047319 Ga0495674_0225384 Ga0495674_0225384_383_1417 337
129 3300047319 Ga0495674_0322842 Ga0495674_0322842_25_1041 337
130 3300047322 Ga0495680_0112528 Ga0495680_0112528_286_1302 337
131 3300047673 Ga0495593_0025730 Ga0495593_0025730_2210_3226 337
132 3300048088 Ga0495602_0178706 Ga0495602_0178706_301_1317 337
133 3300048088 Ga0495602_0247074 Ga0495602_0247074_250_1266 337
134 3300048906 Ga0496103_0182567 Ga0496103_0182567_113_1126 337
135 3300048909 Ga0496106_0161669 Ga0496106_0161669_559_1572 337
136 3300048912 Ga0496109_0082376 Ga0496109_0082376_1869_2882 337
137 3300048913 Ga0496110_0385113 Ga0496110_0385113_11_1024 337
138 3300049583 Ga0501067_0023931 Ga0501067_0023931_2262_3275 337
139 3300049585 Ga0501069_0118039 Ga0501069_0118039_360_1373 337
140 3300050507 nmdc:mga05p37_129818_c1 nmdc:mga05p37_129818_c1_1794_2828 337
141 3300053077 Ga0495601_0154078 Ga0495601_0154078_430_1446 337
142 3300053078 Ga0495612_0042360 Ga0495612_0042360_522_1538 337
143 3300053085 Ga0495619_0165969 Ga0495619_0165969_226_1242 337
144 3300053085 Ga0495619_0259297 Ga0495619_0259297_39_1070 337

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02371

Transposase_20

Transposase IS116/IS110/IS902 family

196

281

0.94

PF01548

DEDD_Tnp_IS110

Transposase

4

150

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4e1j-assembly2.cif.gz_B crystal structure of glycerol kinase in complex with glycerol from sinorhizobium meliloti 1021 0.809 1 31
6hxt-assembly1.cif.gz_A-2 crystal structure of the head domain of human ccdc61 0.7603 4 32
4o8k-assembly1.cif.gz_B crystal structure of type iii pantothenate kinase from burkholderia thailandensis, apo structure 0.726 1 75
7t1h-assembly1.cif.gz_A crystal structure of cab1 pantothenate kinase from saccharomyces cerevisiae in complex with compound yu281445 0.6983 2 86
4bc5-assembly2.cif.gz_B crystal structure of human d-xylulokinase in complex with inhibitor 5- deoxy-5-fluoro-d-xylulose 0.6966 2 40
ID Description Score Start End Superfamily
af_A0A1D6DWZ1_6_279_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8556 1 31 3.30.420.40
af_O07182_4_158_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.798 5 154 3.30.420.10
af_O07182_4_158_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7708 5 154 3.30.420.10
af_Q4CTN7_365_517_3.30.420.140 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;YqgF/RNase H-like domain 0.7232 2 109 3.30.420.140
af_P96234_14_162_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7138 5 146 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A538JN30-F1-model_v4 IS110 family transposase 0.9115 98 337 GO:0003677
GO:0004803
GO:0006313
AF-D6JZJ3-F1-model_v4 Transposase, undefined 0.9067 2 112 GO:0003677
GO:0004803
GO:0006313
AF-A0A7I7LMH5-F1-model_v4 deleted 0.9044 143 332
AF-A0A6G3V236-F1-model_v4 deleted 0.9013 128 332
AF-A0A538JN30-F1-model_v4 IS110 family transposase 0.9006 98 337 GO:0003677
GO:0004803
GO:0006313

Feature Viewer

pLDDT pTM Quality
86.83 0.77 High
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Predicted Structure (AlphaFold2)

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