F191847

General Info

Members Datasets Scaffolds Average Seq Length
144 102 144 270

Family's Representative Sequence

Representative Sequence 3300025898|Ga0207692_10209729|Ga0207692_102097292
Length 308
Sequence VSEGGARRAASSAHGIPSYARAVPDVSERTGEIGGLPVFWREAPSDGAAGADAVAAGRDGHSVPLYLHGVPTNSDDWVEFLARSGGVAPDLPGFGRSGKPGSLRFTIDEYADFIGTFLDVNEVERVSMVVHDWGAVGLAFAQRHPQRIDRLVVINAVPLLPGYRWHRTARIWRTPGLGELSMGTISRRTLRLLSREGNATPGPMPDAWLDSVLDHFDQGTQRAILRLYRSSPPDVLAAAGARLGEIGAPALVVWGTRDPYIPARFAQAYADALGGAELLTLDDAGHWPWLDRPDVIERVVSFLSAAPR

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
8 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
32 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
47 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
48 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
49 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
50 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
51 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
52 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
53 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
54 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
55 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
56 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
57 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
60 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
61 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
62 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
63 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
64 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
65 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
66 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
67 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
68 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
69 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
70 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
71 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
72 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
73 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
78 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
79 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
80 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
81 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
82 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
83 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
84 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
85 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
86 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
87 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
88 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
93 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
94 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
95 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
96 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
97 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
98 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
99 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
100 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
101 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
102 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.86
Nodule 0
Rhizoplane 13.89
Rhizosphere 80.56
Stem 0
Stem Tuber 0
Unclassified 0.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10000018 3300003373 Bacteria 17776
2 JGI25407J50210_10006982 3300003373 Bacteria 2824
3 Ga0070668_100350036 3300005347 Bacteria 1250
4 Ga0070709_10164870 3300005434 Bacteria 1544
5 Ga0070714_100156134 3300005435 Bacteria 2060
6 Ga0070711_100000637 3300005439 Bacteria 18301
7 Ga0070711_100007058 3300005439 Bacteria 6814
8 Ga0070711_100050142 3300005439 Bacteria 2861
9 Ga0070678_100094974 3300005456 Bacteria 2296
10 Ga0070686_100044860 3300005544 Bacteria 2782
11 Ga0070664_100074685 3300005564 Bacteria 2910
12 Ga0070664_100126712 3300005564 Bacteria 2240
13 Ga0068856_100017068 3300005614 Bacteria 7037
14 Ga0068860_100246199 3300005843 Bacteria 1740
15 Ga0081455_10015099 3300005937 Bacteria 7519
16 Ga0081455_10132282 3300005937 Bacteria 1949
17 Ga0081538_10000165 3300005981 Bacteria 70648
18 Ga0081538_10000990 3300005981 Bacteria 30138
19 Ga0081538_10001059 3300005981 Bacteria 29324
20 Ga0081538_10001947 3300005981 Bacteria 20687
21 Ga0081538_10002468 3300005981 Bacteria 18068
22 Ga0081538_10003490 3300005981 Bacteria 14842
23 Ga0081538_10010471 3300005981 Bacteria 7604
24 Ga0081538_10052805 3300005981 Bacteria 2424
25 Ga0081540_1000153 3300005983 Bacteria 70813
26 Ga0075365_10001387 3300006038 Bacteria 10909
27 Ga0075364_10033108 3300006051 Bacteria 3325
28 Ga0075364_10124826 3300006051 Bacteria 1725
29 Ga0070712_100014849 3300006175 Bacteria 5005
30 Ga0070712_100278874 3300006175 Bacteria 1345
31 Ga0075428_100052633 3300006844 Bacteria 4461
32 Ga0075430_100012784 3300006846 Bacteria 7151
33 Ga0075430_100076896 3300006846 Bacteria 2797
34 Ga0075431_100003620 3300006847 Bacteria 14974
35 Ga0075434_100488573 3300006871 Bacteria 1252
36 Ga0075429_100025226 3300006880 Bacteria 5160
37 Ga0075429_100138298 3300006880 Archaea 2132
38 Ga0105240_10005215 3300009093 Bacteria 19441
39 Ga0111539_10994722 3300009094 Bacteria 975
40 Ga0105245_10034416 3300009098 Bacteria 4493
41 Ga0105247_10172698 3300009101 Bacteria 1438
42 Ga0114129_10017685 3300009147 Bacteria 10150
43 Ga0114129_10256399 3300009147 Unclassified 2346
44 Ga0114129_10573373 3300009147 Bacteria 1465
45 Ga0105243_10055045 3300009148 Bacteria 3160
46 Ga0105243_10587864 3300009148 Bacteria 1070
47 Ga0105242_10110543 3300009176 Bacteria 2342
48 Ga0105237_10259649 3300009545 Bacteria 1740
49 Ga0105239_10990451 3300010375 Bacteria 966
50 Ga0157376_10323526 3300014969 Bacteria 1467
51 Ga0207692_10209729 3300025898 Bacteria 1150
52 Ga0207695_10003355 3300025913 Bacteria 22624
53 Ga0207693_10026687 3300025915 Bacteria 4569
54 Ga0207693_10090996 3300025915 Bacteria 2392
55 Ga0207693_10104698 3300025915 Bacteria 2219
56 Ga0207693_10306485 3300025915 Bacteria 1243
57 Ga0207663_10000426 3300025916 Bacteria 18302
58 Ga0207663_10037143 3300025916 Bacteria 2935
59 Ga0207663_10071152 3300025916 Bacteria 2244
60 Ga0207687_10323580 3300025927 Bacteria 1249
61 Ga0207690_10409586 3300025932 Bacteria 1083
62 Ga0207706_10022392 3300025933 Bacteria 5671
63 Ga0207709_10378030 3300025935 Bacteria 1077
64 Ga0207679_10028659 3300025945 Bacteria 3867
65 Ga0207702_10023721 3300026078 Bacteria 5089
66 Ga0207648_10131107 3300026089 Bacteria 2206
67 Ga0207675_100355584 3300026118 Bacteria 1436
68 Ga0207683_10035663 3300026121 Bacteria 4327
69 Ga0207683_10500486 3300026121 Archaea 1122
70 Ga0268264_10154243 3300028381 Bacteria 2062
71 Ga0265337_1002425 3300028556 Bacteria 8576
72 Ga0265326_10000385 3300028558 Bacteria 18004
73 Ga0265319_1000458 3300028563 Bacteria 28965
74 Ga0265318_10002811 3300028577 Bacteria 9095
75 Ga0265336_10000001 3300028666 Bacteria 916179
76 Ga0265338_10000004 3300028800 Bacteria 644793
77 Ga0265340_10000002 3300031247 Bacteria 711693
78 Ga0265327_10005341 3300031251 Bacteria 10761
79 Ga0265316_10033347 3300031344 Bacteria 4194
80 Ga0307406_10019205 3300031901 Bacteria 4009
81 Ga0307416_100207266 3300032002 Bacteria 1866
82 Ga0307415_100000524 3300032126 Bacteria 16693
83 Ga0307415_100035653 3300032126 Bacteria 3251
84 Ga0307415_100148892 3300032126 Bacteria 1799
85 Ga0395898_0089577 3300037466 Bacteria 2961
86 Ga0395901_0192946 3300038443 Bacteria 2136
87 Ga0466971_0005695 3300044719 Bacteria 5415
88 Ga0466967_0087939 3300045976 Bacteria 2818
89 Ga0466967_0782089 3300045976 Bacteria 947
90 Ga0495664_0000029 3300046477 Bacteria 96330
91 Ga0495630_0001225 3300046517 Bacteria 17729
92 Ga0495652_0039313 3300046529 Bacteria 4091
93 Ga0495645_0000018 3300046543 Bacteria 155263
94 Ga0495645_0000091 3300046543 Bacteria 63295
95 Ga0495657_0000016 3300046675 Bacteria 183127
96 Ga0495599_0247995 3300046678 Bacteria 1084
97 Ga0495600_0020775 3300046809 Unclassified 4201
98 Ga0495604_0000589 3300047317 Bacteria 31481
99 Ga0495676_0241186 3300047321 Bacteria 1237
100 Ga0495679_059465 3300047446 Bacteria 1124
101 Ga0495684_0019706 3300047471 Bacteria 5198
102 Ga0495684_0047447 3300047471 Bacteria 3285
103 Ga0496100_0013492 3300048903 Bacteria 4714
104 Ga0496102_0008433 3300048905 Bacteria 8835
105 Ga0496103_0000386 3300048906 Bacteria 39461
106 Ga0496103_0005314 3300048906 Bacteria 7718
107 Ga0496103_0056312 3300048906 Bacteria 2440
108 Ga0496104_0000006 3300048907 Bacteria 536446
109 Ga0496104_0015708 3300048907 Bacteria 6866
110 Ga0496105_0332221 3300048908 Bacteria 1216
111 Ga0496105_0375280 3300048908 Bacteria 1132
112 Ga0496106_0015911 3300048909 Bacteria 5564
113 Ga0496107_0062565 3300048910 Bacteria 2696
114 Ga0496108_0684225 3300048911 Bacteria 890
115 Ga0496109_0094743 3300048912 Bacteria 2763
116 Ga0496110_0000081 3300048913 Bacteria 49777
117 Ga0496111_0000109 3300048914 Bacteria 36285
118 Ga0496112_0364135 3300048915 Unclassified 1388
119 Ga0496114_0013358 3300048917 Bacteria 6582
120 Ga0496115_0000884 3300048918 Bacteria 21818
121 Ga0496115_0002240 3300048918 Bacteria 13856
122 Ga0496115_0073380 3300048918 Bacteria 2777
123 Ga0496123_0090896 3300048926 Bacteria 1813
124 Ga0501031_0178670 3300049568 Bacteria 1387
125 Ga0501036_0370047 3300049572 Bacteria 1196
126 Ga0501041_0094667 3300049577 Bacteria 1845
127 Ga0501041_0219272 3300049577 Bacteria 1194
128 Ga0501046_0313404 3300049580 Bacteria 1144
129 Ga0501071_0017806 3300049587 Bacteria 4908
130 Ga0501071_0116739 3300049587 Unclassified 1976
131 Ga0501071_0238851 3300049587 Bacteria 1370
132 Ga0501079_0171963 3300049741 Bacteria 1689
133 Ga0501081_0148278 3300049743 Bacteria 1684
134 nmdc:mga00v17_17832_c1 3300050491 Bacteria 4026
135 nmdc:mga00v17_95314_c1 3300050491 Bacteria 1873
136 nmdc:mga0yw44_28615_c1 3300050492 Bacteria 3208
137 nmdc:mga0yw44_567450_c1 3300050492 Bacteria 771
138 nmdc:mga05p37_24960_c1 3300050507 Bacteria 7266
139 nmdc:mga09592_21331_c1 3300050508 Bacteria 5339
140 nmdc:mga09592_75066_c1 3300050508 Bacteria 2874
141 nmdc:mga0qj67_807_c1 3300050509 Bacteria 21341
142 nmdc:mga06r32_27367_c1 3300050510 Bacteria 5326
143 Ga0501084_0241053 3300054114 Bacteria 1526
144 Ga0530510_0353744 3300061734 Bacteria 1103

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050492 nmdc:mga0yw44_567450_c1 nmdc:mga0yw44_567450_c1_72_761 225
2 3300049577 Ga0501041_0094667 Ga0501041_0094667_25_759 231
3 3300006880 Ga0075429_100025226 Ga0075429_1000252263 241
4 3300048908 Ga0496105_0375280 Ga0496105_0375280_13_834 244
5 3300025935 Ga0207709_10378030 Ga0207709_103780301 245
6 3300009176 Ga0105242_10110543 Ga0105242_101105433 246
7 3300050492 nmdc:mga0yw44_28615_c1 nmdc:mga0yw44_28615_c1_41_862 246
8 3300005983 Ga0081540_1000153 Ga0081540_100015356 247
9 3300037466 Ga0395898_0089577 Ga0395898_0089577_573_1343 249
10 3300038443 Ga0395901_0192946 Ga0395901_0192946_186_956 249
11 3300044719 Ga0466971_0005695 Ga0466971_0005695_2894_3652 250
12 3300005564 Ga0070664_100126712 Ga0070664_1001267122 254
13 3300005981 Ga0081538_10002468 Ga0081538_1000246815 254
14 3300025933 Ga0207706_10022392 Ga0207706_100223926 254
15 3300026089 Ga0207648_10131107 Ga0207648_101311073 254
16 3300026118 Ga0207675_100355584 Ga0207675_1003555841 254
17 3300031901 Ga0307406_10019205 Ga0307406_100192053 254
18 3300032002 Ga0307416_100207266 Ga0307416_1002072663 254
19 3300032126 Ga0307415_100000524 Ga0307415_1000005245 254
20 3300045976 Ga0466967_0782089 Ga0466967_0782089_146_928 254
21 3300046543 Ga0495645_0000091 Ga0495645_0000091_3751_4575 254
22 3300003373 JGI25407J50210_10006982 JGI25407J50210_100069823 255
23 3300005564 Ga0070664_100074685 Ga0070664_1000746852 255
24 3300005937 Ga0081455_10015099 Ga0081455_100150996 255
25 3300005937 Ga0081455_10132282 Ga0081455_101322823 255
26 3300005981 Ga0081538_10000990 Ga0081538_1000099027 255
27 3300005981 Ga0081538_10001059 Ga0081538_1000105910 255
28 3300005981 Ga0081538_10010471 Ga0081538_100104716 255
29 3300006846 Ga0075430_100076896 Ga0075430_1000768964 255
30 3300006871 Ga0075434_100488573 Ga0075434_1004885732 255
31 3300009147 Ga0114129_10017685 Ga0114129_100176855 255
32 3300009147 Ga0114129_10573373 Ga0114129_105733731 255
33 3300025945 Ga0207679_10028659 Ga0207679_100286594 255
34 3300032126 Ga0307415_100035653 Ga0307415_1000356533 255
35 3300045976 Ga0466967_0087939 Ga0466967_0087939_842_1657 255
36 3300046477 Ga0495664_0000029 Ga0495664_0000029_65474_66370 255
37 3300046529 Ga0495652_0039313 Ga0495652_0039313_533_1351 255
38 3300046809 Ga0495600_0020775 Ga0495600_0020775_2871_3767 255
39 3300047446 Ga0495679_059465 Ga0495679_059465_185_1072 255
40 3300047471 Ga0495684_0047447 Ga0495684_0047447_1817_2665 255
41 3300048906 Ga0496103_0000386 Ga0496103_0000386_37948_38766 255
42 3300048906 Ga0496103_0056312 Ga0496103_0056312_910_1791 255
43 3300048911 Ga0496108_0684225 Ga0496108_0684225_15_830 255
44 3300048918 Ga0496115_0000884 Ga0496115_0000884_4293_5180 255
45 3300048918 Ga0496115_0002240 Ga0496115_0002240_11272_12159 255
46 3300048926 Ga0496123_0090896 Ga0496123_0090896_106_987 255
47 3300049568 Ga0501031_0178670 Ga0501031_0178670_91_861 255
48 3300049572 Ga0501036_0370047 Ga0501036_0370047_370_1140 255
49 3300049577 Ga0501041_0219272 Ga0501041_0219272_182_952 255
50 3300049580 Ga0501046_0313404 Ga0501046_0313404_243_1019 255
51 3300049587 Ga0501071_0017806 Ga0501071_0017806_2037_2813 255
52 3300049587 Ga0501071_0238851 Ga0501071_0238851_453_1223 255
53 3300049743 Ga0501081_0148278 Ga0501081_0148278_532_1308 255
54 3300050507 nmdc:mga05p37_24960_c1 nmdc:mga05p37_24960_c1_1407_2180 255
55 3300050508 nmdc:mga09592_75066_c1 nmdc:mga09592_75066_c1_52_825 255
56 3300054114 Ga0501084_0241053 Ga0501084_0241053_702_1478 255
57 3300061734 Ga0530510_0353744 Ga0530510_0353744_88_864 255
58 3300005347 Ga0070668_100350036 Ga0070668_1003500362 256
59 3300005434 Ga0070709_10164870 Ga0070709_101648702 256
60 3300005439 Ga0070711_100000637 Ga0070711_1000006373 256
61 3300005439 Ga0070711_100007058 Ga0070711_1000070583 256
62 3300005439 Ga0070711_100050142 Ga0070711_1000501422 256
63 3300005456 Ga0070678_100094974 Ga0070678_1000949742 256
64 3300005544 Ga0070686_100044860 Ga0070686_1000448602 256
65 3300005614 Ga0068856_100017068 Ga0068856_1000170684 256
66 3300005843 Ga0068860_100246199 Ga0068860_1002461992 256
67 3300006038 Ga0075365_10001387 Ga0075365_100013876 256
68 3300006051 Ga0075364_10124826 Ga0075364_101248262 256
69 3300006175 Ga0070712_100278874 Ga0070712_1002788742 256
70 3300009093 Ga0105240_10005215 Ga0105240_100052152 256
71 3300009098 Ga0105245_10034416 Ga0105245_100344165 256
72 3300009101 Ga0105247_10172698 Ga0105247_101726982 256
73 3300009147 Ga0114129_10256399 Ga0114129_102563992 256
74 3300009148 Ga0105243_10055045 Ga0105243_100550454 256
75 3300009148 Ga0105243_10587864 Ga0105243_105878641 256
76 3300009545 Ga0105237_10259649 Ga0105237_102596493 256
77 3300010375 Ga0105239_10990451 Ga0105239_109904511 256
78 3300014969 Ga0157376_10323526 Ga0157376_103235262 256
79 3300025913 Ga0207695_10003355 Ga0207695_1000335516 256
80 3300025915 Ga0207693_10026687 Ga0207693_100266876 256
81 3300025915 Ga0207693_10090996 Ga0207693_100909962 256
82 3300025915 Ga0207693_10104698 Ga0207693_101046982 256
83 3300025916 Ga0207663_10000426 Ga0207663_1000042618 256
84 3300025916 Ga0207663_10037143 Ga0207663_100371432 256
85 3300025916 Ga0207663_10071152 Ga0207663_100711522 256
86 3300025927 Ga0207687_10323580 Ga0207687_103235802 256
87 3300026078 Ga0207702_10023721 Ga0207702_100237213 256
88 3300026121 Ga0207683_10035663 Ga0207683_100356633 256
89 3300026121 Ga0207683_10500486 Ga0207683_105004861 256
90 3300028381 Ga0268264_10154243 Ga0268264_101542432 256
91 3300028556 Ga0265337_1002425 Ga0265337_10024258 256
92 3300028558 Ga0265326_10000385 Ga0265326_1000038510 256
93 3300028563 Ga0265319_1000458 Ga0265319_100045811 256
94 3300028577 Ga0265318_10002811 Ga0265318_100028112 256
95 3300028666 Ga0265336_10000001 Ga0265336_10000001807 256
96 3300028800 Ga0265338_10000004 Ga0265338_1000000476 256
97 3300031247 Ga0265340_10000002 Ga0265340_1000000276 256
98 3300031251 Ga0265327_10005341 Ga0265327_100053418 256
99 3300031344 Ga0265316_10033347 Ga0265316_100333474 256
100 3300032126 Ga0307415_100148892 Ga0307415_1001488921 256
101 3300047317 Ga0495604_0000589 Ga0495604_0000589_4492_5355 256
102 3300047321 Ga0495676_0241186 Ga0495676_0241186_159_980 256
103 3300048903 Ga0496100_0013492 Ga0496100_0013492_3312_4133 256
104 3300048905 Ga0496102_0008433 Ga0496102_0008433_976_1797 256
105 3300048906 Ga0496103_0005314 Ga0496103_0005314_3793_4614 256
106 3300048907 Ga0496104_0000006 Ga0496104_0000006_172372_173241 256
107 3300048907 Ga0496104_0015708 Ga0496104_0015708_4708_5529 256
108 3300048908 Ga0496105_0332221 Ga0496105_0332221_36_857 256
109 3300048909 Ga0496106_0015911 Ga0496106_0015911_945_1766 256
110 3300048910 Ga0496107_0062565 Ga0496107_0062565_1077_1898 256
111 3300048912 Ga0496109_0094743 Ga0496109_0094743_1568_2389 256
112 3300048913 Ga0496110_0000081 Ga0496110_0000081_1077_1946 256
113 3300048914 Ga0496111_0000109 Ga0496111_0000109_28437_29306 256
114 3300048915 Ga0496112_0364135 Ga0496112_0364135_490_1320 256
115 3300048917 Ga0496114_0013358 Ga0496114_0013358_5050_5871 256
116 3300048918 Ga0496115_0073380 Ga0496115_0073380_1138_1959 256
117 3300049587 Ga0501071_0116739 Ga0501071_0116739_1123_1932 256
118 3300049741 Ga0501079_0171963 Ga0501079_0171963_506_1315 256
119 3300050491 nmdc:mga00v17_17832_c1 nmdc:mga00v17_17832_c1_666_1487 256
120 3300003373 JGI25407J50210_10000018 JGI25407J50210_1000001818 259
121 3300005435 Ga0070714_100156134 Ga0070714_1001561342 259
122 3300005981 Ga0081538_10000165 Ga0081538_1000016569 259
123 3300005981 Ga0081538_10001947 Ga0081538_1000194718 259
124 3300005981 Ga0081538_10003490 Ga0081538_1000349011 259
125 3300005981 Ga0081538_10052805 Ga0081538_100528053 259
126 3300006051 Ga0075364_10033108 Ga0075364_100331084 259
127 3300006175 Ga0070712_100014849 Ga0070712_1000148492 259
128 3300006844 Ga0075428_100052633 Ga0075428_1000526334 259
129 3300006846 Ga0075430_100012784 Ga0075430_1000127843 259
130 3300006847 Ga0075431_100003620 Ga0075431_10000362011 259
131 3300006880 Ga0075429_100138298 Ga0075429_1001382982 259
132 3300009094 Ga0111539_10994722 Ga0111539_109947221 259
133 3300025898 Ga0207692_10209729 Ga0207692_102097292 259
134 3300025915 Ga0207693_10306485 Ga0207693_103064852 259
135 3300025932 Ga0207690_10409586 Ga0207690_104095861 259
136 3300046517 Ga0495630_0001225 Ga0495630_0001225_2131_2985 259
137 3300046543 Ga0495645_0000018 Ga0495645_0000018_46828_47679 259
138 3300046675 Ga0495657_0000016 Ga0495657_0000016_130654_131508 259
139 3300046678 Ga0495599_0247995 Ga0495599_0247995_157_1008 259
140 3300047471 Ga0495684_0019706 Ga0495684_0019706_1711_2565 259
141 3300050491 nmdc:mga00v17_95314_c1 nmdc:mga00v17_95314_c1_688_1539 259
142 3300050508 nmdc:mga09592_21331_c1 nmdc:mga09592_21331_c1_3294_4076 259
143 3300050509 nmdc:mga0qj67_807_c1 nmdc:mga0qj67_807_c1_14366_15148 259
144 3300050510 nmdc:mga06r32_27367_c1 nmdc:mga06r32_27367_c1_1859_2641 259

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

65

174

0.92

PF08386

Abhydrolase_4

TAP-like protein

230

305

0.87

PF12697

Abhydrolase_6

Alpha/beta hydrolase family

65

299

0.68

Structural Annotation

Top 5 Hits

ID Description Score Start End
8b6o-assembly1.cif.gz_A x-ray structure of the haloalkane dehalogenase halotag7 circular permutated at positions 141-156 (cphalotagdelta) fused to m13 0.8886 8 122
4bat-assembly1.cif.gz_A-2 structure of a putative epoxide hydrolase t131d mutant from pseudomonas aeruginosa. 0.8573 7 257
4bau-assembly1.cif.gz_A-2 structure of a putative epoxide hydrolase t131d mutant from pseudomonas aeruginosa, with bound mfa 0.8567 7 257
8hgu-assembly1.cif.gz_B epoxide hydrolase from bosea sp. pamc 26642 0.8546 7 258
8b6p-assembly2.cif.gz_B x-ray structure of the haloalkane dehalogenase halotag7 circular permutated at positions 154-156 (cphalotag7_154-156) 0.8512 1 122
ID Description Score Start End Superfamily
4bb0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8627 7 257 3.40.50.1820
af_I1KVG4_94_375_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8396 9 256 3.40.50.1820
3wibA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8394 7 257 3.40.50.1820
af_A0A0R0KMM0_1_93_3.40.50.12270 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8394 7 87 3.40.50.12270
4bb0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.838 7 257 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A838I4R2-F1-model_v4 Alpha/beta fold hydrolase 0.993 8 258 GO:0016787
AF-A0A6I2V9B9-F1-model_v4 Alpha/beta fold hydrolase 0.9826 35 258 GO:0016020
GO:0016787
AF-A0A838I4R2-F1-model_v4 Alpha/beta fold hydrolase 0.9813 8 258 GO:0016787
AF-A0A538M1T6-F1-model_v4 Alpha/beta hydrolase 0.9775 2 257 GO:0016020
GO:0016787
AF-A0A6J7DZV3-F1-model_v4 Unannotated protein 0.9773 5 257 GO:0016020
GO:0046464
GO:0047372

Feature Viewer

pLDDT pTM Quality
95.78 0.93 High
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Predicted Structure (AlphaFold2)

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