F191358

General Info

Members Datasets Scaffolds Average Seq Length
144 121 109 512

Family's Representative Sequence

Representative Sequence 3300006175|Ga0070712_100065706|Ga0070712_1000657062
Length 535
Sequence MRIGIDVGGTNTDAVLMDGTDVLAEVKTVTTQDVTAGIAGALRGLVGARDFSPAQIQAVMIGTTHFTNALIEGRRLARTAALRLALPATEGLPPMVDWPERLRQAIGGHAYLCHGGHEFDGRQISPLDEDEIRRAARDMAAQGVRSVAISSVFSPVNAEFEQRAADIVTSVLPGVHVSLSHEIGRVGLLERENATIINACLRDLADQIVDAIGSALLTAGISVPLYLSQNDGTLMDVEYARRYPVATFASGPTNSMRGAAFLSGLADCAVVDIGGTTTDVGILTRGFPREAATEVDIGGVRSNFRMPDVLSVGIGGGSLVHAGAEISVGPDSVGYELGTKALVFGGNTLTATDLAVAAGLADIGDSRRTGRVDRELVRGGLDAIAMAVAAVVDRMRTSPEPLPVVAVGGGSILIPDKLPGSGEVNRPGHYAVANAIGAAIAQVGGEVDRIFALGAATREEVLAAAKGEAAGKAIAAGARPDSVQIVEVDEVPIAYLPGNAVRVRIKAVGDLQLTTDRPPRGADNAPEDPPAGPIR

Samples

Sample ID Description Type Environment
1 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
2 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
3 2643221616 Leifsonia sp. Root227 Isolate Unclassified
4 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
5 2808606448 Streptomyces sp. 193411 Isolate Unclassified
6 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
7 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
8 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
9 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
10 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
11 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
12 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
13 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
14 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
15 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
16 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
17 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
18 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
19 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
20 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
21 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
22 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
23 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
24 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
25 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
26 2922554459 Rhodococcus sp. 66b Isolate Unclassified
27 2928153084 Leifsonia sp. 563 Isolate Unclassified
28 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
29 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
30 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
31 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
32 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
33 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
34 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
35 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
36 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
37 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
38 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
39 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
60 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
61 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
62 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
65 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
66 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
72 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
73 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
78 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
79 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
80 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
81 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
82 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
83 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
84 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
85 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
86 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
87 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
88 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
89 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
90 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
91 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
92 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
93 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
94 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
95 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
96 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
97 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
98 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
99 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
100 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
101 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
102 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
110 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
111 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
112 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
113 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
114 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
115 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
116 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
117 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
118 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
119 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
120 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
121 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.61
Metatranscriptomes 2.08
Isolates 24.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.72
Nodule 0
Rhizoplane 11.81
Rhizosphere 44.44
Stem 0
Stem Tuber 0.69
Unclassified 33.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1008195 3300002987 Bacteria 2898
2 Ga0006562J51391_1016796 3300003578 Bacteria 7640
3 Ga0006562J51391_1016797 3300003578 Bacteria 7710
4 Ga0055533_1000002 3300003756 Bacteria 1196393
5 Ga0055541_1000383 3300003841 Bacteria 13489
6 Ga0070692_10000337 3300005345 Bacteria 13598
7 Ga0070698_100021347 3300005471 Bacteria 6783
8 Ga0068857_100022146 3300005577 Bacteria 5590
9 Ga0081538_10000275 3300005981 Bacteria 58762
10 Ga0075363_100014949 3300006048 Bacteria 3806
11 Ga0070712_100065706 3300006175 Bacteria 2576
12 Ga0105239_10150454 3300010375 Bacteria 2598
13 Ga0157378_10026877 3300013297 Bacteria 5075
14 Ga0224712_10004643 3300022467 Bacteria 3727
15 Ga0209566_100032 3300025225 Bacteria 338313
16 Ga0209674_100001 3300025226 Bacteria 4013750
17 Ga0209563_100001 3300025230 Bacteria 4013775
18 Ga0209677_100001 3300025253 Bacteria 4013787
19 Ga0207647_10007879 3300025904 Bacteria 7660
20 Ga0207646_10118885 3300025922 Bacteria 2374
21 Ga0207658_10086148 3300025986 Bacteria 2422
22 Ga0207702_10151965 3300026078 Bacteria 2107
23 Ga0207674_10031622 3300026116 Bacteria 5557
24 Ga0207675_100178330 3300026118 Bacteria 2034
25 Ga0307517_10004538 3300028786 Bacteria 21296
26 Ga0307515_10000732 3300028794 Bacteria 75720
27 Ga0307515_10006003 3300028794 Bacteria 24451
28 Ga0307515_10041921 3300028794 Bacteria 7180
29 Ga0307512_10023918 3300030522 Bacteria 5449
30 Ga0307513_10002285 3300031456 Bacteria 26759
31 Ga0307513_10084240 3300031456 Bacteria 3266
32 Ga0307514_10074316 3300031649 Bacteria 2538
33 Ga0307518_10085778 3300031838 Bacteria 2270
34 Ga0307406_10001147 3300031901 Bacteria 14810
35 Ga0307406_10001886 3300031901 Bacteria 11438
36 Ga0307407_10116590 3300031903 Bacteria 1686
37 Ga0307507_10019122 3300033179 Bacteria 7736
38 Ga0307507_10048531 3300033179 Bacteria 4128
39 Ga0307510_10019003 3300033180 Bacteria 8063
40 Ga0395898_0060312 3300037466 Bacteria 3687
41 Ga0395905_0198336 3300037471 Bacteria 1882
42 Ga0436364_0614273 3300037853 Bacteria 19708
43 Ga0395901_0027413 3300038443 Bacteria 5854
44 Ga0395901_0081742 3300038443 Bacteria 3375
45 Ga0466961_0020464 3300044693 Bacteria 4258
46 Ga0466968_0016768 3300044735 Bacteria 2920
47 Ga0466970_0009124 3300044765 Bacteria 5006
48 Ga0466959_0043987 3300045049 Bacteria 3290
49 Ga0466967_0118499 3300045976 Bacteria 2442
50 Ga0495629_0005073 3300046459 Bacteria 9854
51 Ga0495664_0095078 3300046477 Bacteria 1794
52 Ga0495630_0081141 3300046517 Bacteria 2448
53 Ga0495668_0000479 3300046616 Bacteria 50074
54 Ga0495588_0034822 3300046674 Bacteria 2548
55 Ga0495671_0002670 3300046692 Bacteria 11184
56 Ga0495600_0063774 3300046809 Bacteria 2408
57 Ga0495681_0000578 3300047470 Bacteria 27956
58 Ga0495614_0001073 3300048089 Bacteria 11696
59 Ga0496101_0035846 3300048904 Bacteria 3510
60 Ga0496101_0159336 3300048904 Bacteria 1730
61 Ga0496102_0070818 3300048905 Bacteria 3202
62 Ga0496105_0013660 3300048908 Bacteria 6447
63 Ga0496105_0146771 3300048908 Bacteria 1940
64 Ga0496106_0003483 3300048909 Bacteria 11720
65 Ga0496106_0048575 3300048909 Bacteria 3195
66 Ga0496106_0069614 3300048909 Bacteria 2686
67 Ga0496109_0006490 3300048912 Bacteria 9851
68 Ga0496109_0360326 3300048912 Bacteria 1374
69 Ga0496110_0007246 3300048913 Bacteria 8840
70 Ga0496110_0013746 3300048913 Bacteria 6708
71 Ga0496111_0003699 3300048914 Bacteria 9508
72 Ga0496111_0010023 3300048914 Bacteria 6339
73 Ga0496112_0007584 3300048915 Bacteria 9641
74 Ga0496112_0112639 3300048915 Bacteria 2691
75 Ga0496114_0044660 3300048917 Bacteria 3678
76 Ga0496117_0001887 3300048920 Bacteria 28091
77 Ga0496117_0013213 3300048920 Bacteria 7217
78 Ga0496118_0010451 3300048921 Bacteria 9195
79 Ga0496118_0038807 3300048921 Bacteria 3811
80 Ga0496119_0001666 3300048922 Bacteria 25976
81 Ga0496119_0003042 3300048922 Bacteria 17747
82 Ga0496119_0024591 3300048922 Bacteria 4232
83 Ga0496122_0010058 3300048925 Bacteria 9827
84 Ga0496123_0024729 3300048926 Bacteria 4555
85 Ga0496124_0035856 3300048927 Bacteria 4334
86 Ga0496125_0032297 3300048928 Bacteria 4651
87 Ga0496125_0114416 3300048928 Bacteria 1943
88 Ga0496126_0001138 3300048929 Bacteria 44245
89 Ga0501033_0023572 3300049570 Bacteria 4642
90 Ga0501033_0024644 3300049570 Bacteria 4537
91 Ga0501034_0000554 3300049571 Bacteria 59304
92 Ga0501038_0006290 3300049574 Bacteria 10980
93 Ga0501038_0012282 3300049574 Bacteria 7822
94 Ga0501042_0004631 3300049578 Bacteria 8778
95 Ga0501043_0001326 3300049579 Bacteria 21663
96 Ga0501047_0034408 3300049581 Bacteria 4891
97 Ga0501048_0004728 3300049582 Bacteria 10364
98 Ga0501073_0021421 3300049589 Bacteria 4660
99 Ga0501075_0043943 3300049591 Bacteria 3352
100 Ga0501081_0079495 3300049743 Bacteria 2294
101 Ga0501044_0048542 3300049823 Bacteria 4384
102 nmdc:mga07m45_40579_c1 3300050496 Bacteria 2604
103 nmdc:mga05p37_390303_c1 3300050507 Bacteria 1628
104 Ga0500641_0019502 3300053096 Bacteria 2565
105 Ga0500560_001618 3300053107 Bacteria 3993
106 Ga0500573_0001221 3300053140 Bacteria 12065
107 Ga0500616_0004527 3300053153 Bacteria 9859
108 Ga0500599_000216 3300053736 Bacteria 5432
109 Ga0530510_0108332 3300061734 Bacteria 2034

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048912 Ga0496109_0360326 Ga0496109_0360326_72_1325 397
2 3300049743 Ga0501081_0079495 Ga0501081_0079495_606_1874 397
3 3300050507 nmdc:mga05p37_390303_c1 nmdc:mga05p37_390303_c1_39_1412 432
4 3300048928 Ga0496125_0114416 Ga0496125_0114416_27_1430 437
5 3300037471 Ga0395905_0198336 Ga0395905_0198336_13_1440 450
6 3300026118 Ga0207675_100178330 Ga0207675_1001783302 454
7 3300044735 Ga0466968_0016768 Ga0466968_0016768_1251_2771 461
8 3300048927 Ga0496124_0035856 Ga0496124_0035856_1472_3028 476
9 3300031903 Ga0307407_10116590 Ga0307407_101165901 478
10 3300048908 Ga0496105_0013660 Ga0496105_0013660_3233_4789 478
11 3300048912 Ga0496109_0006490 Ga0496109_0006490_1486_3042 478
12 3300048913 Ga0496110_0007246 Ga0496110_0007246_1080_2636 478
13 3300048914 Ga0496111_0010023 Ga0496111_0010023_4346_5902 478
14 3300005471 Ga0070698_100021347 Ga0070698_1000213472 481
15 3300048904 Ga0496101_0035846 Ga0496101_0035846_1426_2976 481
16 3300048909 Ga0496106_0048575 Ga0496106_0048575_865_2415 481
17 3300048921 Ga0496118_0038807 Ga0496118_0038807_1846_3426 481
18 3300048926 Ga0496123_0024729 Ga0496123_0024729_2665_4245 481
19 3300048925 Ga0496122_0010058 Ga0496122_0010058_8147_9721 484
20 3300003578 Ga0006562J51391_1016796 Ga0006562J51391_10167965 485
21 3300003578 Ga0006562J51391_1016797 Ga0006562J51391_10167972 485
22 3300048905 Ga0496102_0070818 Ga0496102_0070818_1053_2600 485
23 3300048908 Ga0496105_0146771 Ga0496105_0146771_348_1895 485
24 3300048920 Ga0496117_0013213 Ga0496117_0013213_2313_3866 485
25 3300048921 Ga0496118_0010451 Ga0496118_0010451_4503_6056 485
26 3300049574 Ga0501038_0006290 Ga0501038_0006290_4376_5938 487
27 3300049578 Ga0501042_0004631 Ga0501042_0004631_326_1888 487
28 3300049579 Ga0501043_0001326 Ga0501043_0001326_15702_17264 487
29 3300049581 Ga0501047_0034408 Ga0501047_0034408_1601_3163 487
30 3300049582 Ga0501048_0004728 Ga0501048_0004728_4824_6386 487
31 3300049589 Ga0501073_0021421 Ga0501073_0021421_2397_3959 487
32 3300049823 Ga0501044_0048542 Ga0501044_0048542_1014_2576 487
33 3300005981 Ga0081538_10000275 Ga0081538_1000027546 488
34 3300030522 Ga0307512_10023918 Ga0307512_100239184 488
35 3300038443 Ga0395901_0027413 Ga0395901_0027413_4265_5839 488
36 iso_pu_bacteria 2866612099 2866614315 488
37 iso_pu_bacteria 2895427314 2895439381 490
38 iso_pu_bacteria 2899370129 2899370479 490
39 iso_pu_bacteria 8056207758 8056212624 490
40 3300037466 Ga0395898_0060312 Ga0395898_0060312_1262_2812 491
41 3300038443 Ga0395901_0081742 Ga0395901_0081742_71_1621 491
42 3300046477 Ga0495664_0095078 Ga0495664_0095078_173_1723 491
43 3300046517 Ga0495630_0081141 Ga0495630_0081141_583_2133 491
44 3300046809 Ga0495600_0063774 Ga0495600_0063774_306_1856 491
45 3300049591 Ga0501075_0043943 Ga0501075_0043943_1788_3338 491
46 3300028794 Ga0307515_10006003 Ga0307515_100060032 492
47 iso_pu_bacteria 2565956761 2566991932 492
48 iso_pu_bacteria 2643221616 2644095251 492
49 iso_pu_bacteria 2811994882 2812373441 492
50 iso_pu_bacteria 2818991462 2819692899 492
51 iso_pu_bacteria 2835188231 2835189920 492
52 iso_pu_bacteria 2844841374 2844841819 492
53 iso_pu_bacteria 2862993130 2862996217 492
54 iso_pu_bacteria 2904430863 2904431764 492
55 iso_pu_bacteria 2904501621 2904504288 492
56 iso_pu_bacteria 2904535858 2904540374 492
57 iso_pu_bacteria 2908674828 2908676494 492
58 iso_pu_bacteria 2909074476 2909077367 492
59 iso_pu_bacteria 2919055335 2919059008 492
60 iso_pu_bacteria 2922554459 2922554477 492
61 iso_pu_bacteria 2928153084 2928153144 492
62 iso_pu_bacteria 2928500415 2928503466 492
63 iso_pu_bacteria 2939660829 2939662224 492
64 3300031456 Ga0307513_10002285 Ga0307513_1000228517 493
65 3300031901 Ga0307406_10001147 Ga0307406_100011475 493
66 3300037853 Ga0436364_0614273 Ga0436364_0614273_16906_18486 493
67 3300048920 Ga0496117_0001887 Ga0496117_0001887_14291_15865 493
68 3300048928 Ga0496125_0032297 Ga0496125_0032297_640_2214 493
69 3300048929 Ga0496126_0001138 Ga0496126_0001138_30804_32378 493
70 3300049571 Ga0501034_0000554 Ga0501034_0000554_46538_48112 493
71 3300053140 Ga0500573_0001221 Ga0500573_0001221_538_2118 493
72 iso_pu_bacteria 2558860112 2558907235 493
73 iso_pu_bacteria 2857723135 2857726681 493
74 iso_pu_bacteria 2945968032 2945968919 493
75 iso_pu_bacteria 2946080515 2946083350 493
76 3300033179 Ga0307507_10048531 Ga0307507_100485313 494
77 iso_pu_bacteria 2558860112 2558911321 494
78 iso_pu_bacteria 2816332139 2816503557 494
79 iso_pu_bacteria 2899359706 2899366297 494
80 iso_pu_bacteria 2917736166 2917739266 494
81 iso_pu_bacteria 2977264416 2977264453 494
82 iso_pu_bacteria 2997600082 2997604280 494
83 3300028794 Ga0307515_10041921 Ga0307515_100419212 495
84 3300048909 Ga0496106_0003483 Ga0496106_0003483_2123_3673 495
85 iso_pu_bacteria 2784132148 2784586304 495
86 iso_pu_bacteria 2808606448 2809229803 495
87 iso_pu_bacteria 2844849076 2844850450 495
88 3300003756 Ga0055533_1000002 Ga0055533_1000002206 496
89 3300003841 Ga0055541_1000383 Ga0055541_10003839 496
90 3300006048 Ga0075363_100014949 Ga0075363_1000149493 496
91 3300025225 Ga0209566_100032 Ga0209566_100032207 496
92 3300025226 Ga0209674_100001 Ga0209674_1000013357 496
93 3300025230 Ga0209563_100001 Ga0209563_1000013357 496
94 3300025253 Ga0209677_100001 Ga0209677_1000013357 496
95 3300026078 Ga0207702_10151965 Ga0207702_101519652 496
96 3300031901 Ga0307406_10001886 Ga0307406_100018867 496
97 3300044693 Ga0466961_0020464 Ga0466961_0020464_1548_3101 496
98 3300044765 Ga0466970_0009124 Ga0466970_0009124_3377_4930 496
99 3300045049 Ga0466959_0043987 Ga0466959_0043987_194_1747 496
100 3300046616 Ga0495668_0000479 Ga0495668_0000479_25875_27476 496
101 3300048904 Ga0496101_0159336 Ga0496101_0159336_94_1650 496
102 3300048909 Ga0496106_0069614 Ga0496106_0069614_977_2533 496
103 3300048913 Ga0496110_0013746 Ga0496110_0013746_1745_3301 496
104 3300048914 Ga0496111_0003699 Ga0496111_0003699_3735_5291 496
105 3300048915 Ga0496112_0112639 Ga0496112_0112639_580_2136 496
106 3300048917 Ga0496114_0044660 Ga0496114_0044660_457_2013 496
107 3300048922 Ga0496119_0001666 Ga0496119_0001666_18783_20333 496
108 3300048922 Ga0496119_0003042 Ga0496119_0003042_95_1648 496
109 3300049570 Ga0501033_0023572 Ga0501033_0023572_261_1814 496
110 3300049570 Ga0501033_0024644 Ga0501033_0024644_2757_4313 496
111 3300049574 Ga0501038_0012282 Ga0501038_0012282_958_2511 496
112 3300050496 nmdc:mga07m45_40579_c1 nmdc:mga07m45_40579_c1_115_1695 496
113 3300005345 Ga0070692_10000337 Ga0070692_1000033710 497
114 3300006175 Ga0070712_100065706 Ga0070712_1000657062 497
115 3300013297 Ga0157378_10026877 Ga0157378_100268772 497
116 3300025922 Ga0207646_10118885 Ga0207646_101188851 497
117 3300048915 Ga0496112_0007584 Ga0496112_0007584_6448_8013 497
118 3300053096 Ga0500641_0019502 Ga0500641_0019502_380_1954 497
119 3300053153 Ga0500616_0004527 Ga0500616_0004527_86_1654 497
120 3300053736 Ga0500599_000216 Ga0500599_000216_1935_3503 497
121 3300061734 Ga0530510_0108332 Ga0530510_0108332_214_1782 497
122 3300005577 Ga0068857_100022146 Ga0068857_1000221465 498
123 3300010375 Ga0105239_10150454 Ga0105239_101504543 498
124 3300022467 Ga0224712_10004643 Ga0224712_100046432 498
125 3300025904 Ga0207647_10007879 Ga0207647_100078791 498
126 3300025986 Ga0207658_10086148 Ga0207658_100861482 498
127 3300026116 Ga0207674_10031622 Ga0207674_100316222 498
128 3300028786 Ga0307517_10004538 Ga0307517_1000453812 498
129 3300028794 Ga0307515_10000732 Ga0307515_1000073267 498
130 3300031456 Ga0307513_10084240 Ga0307513_100842402 498
131 3300031649 Ga0307514_10074316 Ga0307514_100743162 498
132 3300031838 Ga0307518_10085778 Ga0307518_100857782 498
133 3300033179 Ga0307507_10019122 Ga0307507_100191227 498
134 3300033180 Ga0307510_10019003 Ga0307510_100190034 498
135 3300045976 Ga0466967_0118499 Ga0466967_0118499_275_1849 498
136 3300046459 Ga0495629_0005073 Ga0495629_0005073_3036_4589 498
137 3300046674 Ga0495588_0034822 Ga0495588_0034822_728_2281 498
138 3300046692 Ga0495671_0002670 Ga0495671_0002670_6756_8309 498
139 3300047470 Ga0495681_0000578 Ga0495681_0000578_23574_25127 498
140 3300048089 Ga0495614_0001073 Ga0495614_0001073_8004_9557 498
141 3300053107 Ga0500560_001618 Ga0500560_001618_1207_2760 498
142 iso_pu_bacteria 2811994874 2812332809 498
143 3300002987 JGI25159J45721_1008195 JGI25159J45721_10081952 499
144 3300048922 Ga0496119_0024591 Ga0496119_0024591_71_1618 499

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05378

Hydant_A_N

Hydantoinase/oxoprolinase N-terminal region

2

172

0.97

PF01968

Hydantoinase_A

Hydantoinase/oxoprolinase

191

394

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4y0w-assembly1.cif.gz_B-2 yeaz from pseudomonas aeruginosa 0.7951 2 63
5br9-assembly3.cif.gz_E crystal structure of an uncharacterized protein with similarity to peptidase yeaz from pseudomonas aeruginosa 0.7898 2 63
5l9w-assembly2.cif.gz_b crystal structure of the apc core complex 0.7858 1 482
4y0w-assembly1.cif.gz_C-2 yeaz from pseudomonas aeruginosa 0.7816 2 63
5svc-assembly1.cif.gz_B mechanism of atp-dependent acetone carboxylation, acetone carboxylase nucleotide-free structure 0.7814 2 447
ID Description Score Start End Superfamily
af_Q6ZF69_24_142_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8928 1 64 3.30.420.40
af_Q9VZV9_30_306_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8922 2 64 3.30.420.40
af_I1JIZ2_42_149_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8908 2 65 3.30.420.40
1huxB01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8905 1 64 3.30.420.40
4e1jB01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8891 1 65 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A2V7A724-F1-model_v4 Hydantoinase 0.98 2 232 GO:0016787
AF-A0A537QPY8-F1-model_v4 Hydantoinase/oxoprolinase family protein 0.9771 180 323 GO:0016787
AF-A0A523ULQ2-F1-model_v4 2-hydroxyglutaryl-CoA dehydratase 0.9743 2 64 GO:0046872
AF-A0A7C7NZK5-F1-model_v4 Hydantoinase/oxoprolinase family protein 0.9713 3 239 GO:0016787
AF-A0A537QPY8-F1-model_v4 Hydantoinase/oxoprolinase family protein 0.9705 180 323 GO:0016787

Feature Viewer

pLDDT pTM Quality
86.58 0.84 High
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Predicted Structure (AlphaFold2)

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