F189745

General Info

Members Datasets Scaffolds Average Seq Length
143 118 137 217

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0072317|Ga0495625_0072317_86_838
Length 250
Sequence MPIAPKNSALAMPNGTGRRCWPSNAAKRMSVPSFARAMAEAPILYSFRRCPYAMRARMALLASGIDCEIREIVLRDKPETMIAASPKATVPVLVLPDGRVIDESLDIMRWALAQNDPEQWLADSADGEALIAANDGPFKHHLDRYKYPGRHASDPIVHRAAAIVLLKALEARLDMAAYLCGSACSLADVAIMPFVRQFAAVDPAWFGLQPLPALRNWLARLAGAPLFDRAMARLAIWQPGDRPTLLSELG

Samples

Sample ID Description Type Environment
1 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
2 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
3 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
4 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
5 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
6 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
31 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
53 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
57 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
58 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
59 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
60 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
61 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
62 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
63 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
64 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
65 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
66 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
67 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
68 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
69 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
70 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
71 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
72 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
73 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
74 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
75 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
76 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
77 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
78 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
79 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
80 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
81 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
82 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
83 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
84 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
85 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
86 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
87 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
88 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
89 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
90 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
91 3300049676 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_A_3_control Metagenome Rhizosphere
92 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
93 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
94 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
95 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
96 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
97 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
98 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
99 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
100 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
101 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
102 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
103 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
104 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
105 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
106 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
107 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
108 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
109 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
110 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
111 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
112 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
113 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
114 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
115 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
116 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
117 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
118 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.8
Metatranscriptomes 0
Isolates 4.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.38
Nodule 0
Rhizoplane 2.1
Rhizosphere 61.54
Stem 0
Stem Tuber 0
Unclassified 13.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24752J21851_1000160 3300001976 Bacteria 9211
2 Ga0055531_10049806 3300003794 Bacteria 1116
3 Ga0065165_1002965 3300005262 Bacteria 12906
4 Ga0065714_10202247 3300005288 Bacteria 891
5 Ga0065704_10076185 3300005289 Bacteria 5229
6 Ga0070658_10165971 3300005327 Bacteria 1854
7 Ga0070658_10652496 3300005327 Bacteria 913
8 Ga0070670_100000014 3300005331 Bacteria 234648
9 Ga0070660_100258598 3300005339 Bacteria 1421
10 Ga0070661_100246527 3300005344 Bacteria 1377
11 Ga0070671_100012219 3300005355 Bacteria 6908
12 Ga0070671_100143262 3300005355 Bacteria 2017
13 Ga0070674_100042164 3300005356 Bacteria 3098
14 Ga0070667_100000144 3300005367 Bacteria 89681
15 Ga0070667_100001044 3300005367 Bacteria 25254
16 Ga0070667_100050056 3300005367 Bacteria 3520
17 Ga0070662_100831469 3300005457 Bacteria 786
18 Ga0070665_100865237 3300005548 Bacteria 917
19 Ga0068854_100001374 3300005578 Bacteria 14643
20 Ga0068856_100028648 3300005614 Bacteria 5441
21 Ga0068864_100000021 3300005618 Bacteria 262378
22 Ga0068863_100000009 3300005841 Bacteria 250538
23 Ga0068863_100002111 3300005841 Bacteria 19717
24 Ga0068863_100008391 3300005841 Bacteria 10088
25 Ga0068858_100346081 3300005842 Bacteria 1423
26 Ga0068860_100078316 3300005843 Bacteria 3143
27 Ga0068862_100000017 3300005844 Bacteria 247616
28 Ga0075368_10000070 3300006042 Bacteria 24269
29 Ga0075363_100001786 3300006048 Bacteria 8421
30 Ga0075367_10000247 3300006178 Bacteria 18374
31 Ga0105251_10000507 3300009011 Bacteria 36839
32 Ga0105247_10021311 3300009101 Bacteria 3900
33 Ga0105243_10071568 3300009148 Bacteria 2804
34 Ga0105248_10000030 3300009177 Bacteria 206609
35 Ga0105248_10001125 3300009177 Bacteria 29737
36 Ga0105249_10000137 3300009553 Bacteria 95985
37 Ga0105246_10085092 3300011119 Bacteria 2264
38 Ga0163163_10209325 3300014325 Bacteria 1999
39 Ga0157379_10041703 3300014968 Bacteria 4097
40 Ga0209257_1009954 3300025304 Bacteria 4940
41 Ga0207713_1027687 3300025735 Bacteria 2570
42 Ga0207645_10217783 3300025907 Bacteria 1258
43 Ga0207705_10000084 3300025909 Bacteria 116809
44 Ga0207649_10142926 3300025920 Bacteria 1640
45 Ga0207650_10000095 3300025925 Bacteria 116052
46 Ga0207644_10137424 3300025931 Bacteria 1878
47 Ga0207669_10021542 3300025937 Bacteria 3405
48 Ga0207711_10000029 3300025941 Bacteria 206826
49 Ga0207711_10007265 3300025941 Bacteria 9282
50 Ga0207712_10000734 3300025961 Bacteria 24952
51 Ga0207712_10045557 3300025961 Bacteria 3037
52 Ga0207658_10000995 3300025986 Bacteria 23248
53 Ga0207658_10001866 3300025986 Bacteria 15789
54 Ga0207702_10020749 3300026078 Bacteria 5434
55 Ga0207641_10000017 3300026088 Bacteria 299119
56 Ga0207641_10002967 3300026088 Bacteria 15351
57 Ga0207641_10007009 3300026088 Bacteria 9422
58 Ga0207676_10000037 3300026095 Bacteria 180826
59 Ga0209813_10000031 3300027866 Bacteria 65084
60 Ga0268265_10000025 3300028380 Bacteria 250207
61 Ga0268264_10279624 3300028381 Bacteria 1563
62 Ga0307513_10412112 3300031456 Bacteria 1083
63 Ga0307408_100039159 3300031548 Bacteria 3349
64 Ga0316575_10001621 3300031665 Bacteria 7338
65 Ga0307516_10000136 3300031730 Bacteria 87938
66 Ga0307412_10000122 3300031911 Bacteria 59264
67 Ga0307412_10005285 3300031911 Bacteria 7246
68 Ga0307412_10009228 3300031911 Bacteria 5654
69 Ga0307412_10054387 3300031911 Bacteria 2657
70 Ga0307414_10585861 3300032004 Bacteria 999
71 Ga0316584_0197442 3300036712 Unclassified 1486
72 Ga0395900_0056884 3300037418 Bacteria 4026
73 Ga0395898_0262342 3300037466 Bacteria 1648
74 Ga0400483_257217 3300039062 Bacteria 8000
75 Ga0451807_0335378 3300041486 Bacteria 978
76 Ga0451849_1542000 3300041505 Bacteria 1163
77 Ga0495639_0029594 3300046475 Bacteria 2431
78 Ga0495608_0070023 3300046511 Bacteria 2290
79 Ga0495610_0000136 3300046512 Bacteria 82060
80 Ga0495637_0092635 3300046520 Bacteria 1190
81 Ga0495643_0000107 3300046522 Bacteria 138292
82 Ga0495643_0035930 3300046522 Bacteria 2725
83 Ga0495642_0082098 3300046528 Bacteria 1359
84 Ga0495609_0058286 3300046538 Bacteria 1708
85 Ga0495621_0084381 3300046539 Bacteria 1189
86 Ga0495597_0019378 3300046542 Bacteria 3185
87 Ga0495625_0002025 3300046660 Bacteria 22827
88 Ga0495625_0072317 3300046660 Bacteria 2419
89 Ga0495681_0124119 3300047470 Bacteria 1105
90 Ga0495686_0000057 3300047472 Bacteria 250088
91 Ga0495686_0017706 3300047472 Bacteria 4795
92 Ga0495615_0109934 3300048090 Bacteria 787
93 Ga0496103_0025332 3300048906 Bacteria 3585
94 Ga0496106_0037031 3300048909 Bacteria 3649
95 Ga0496117_0005000 3300048920 Bacteria 14220
96 Ga0496117_0013234 3300048920 Bacteria 7211
97 Ga0496118_0000216 3300048921 Bacteria 100502
98 Ga0496120_0088643 3300048923 Bacteria 1658
99 Ga0496121_0010433 3300048924 Bacteria 10481
100 Ga0496121_0014736 3300048924 Bacteria 8259
101 Ga0496121_0092350 3300048924 Bacteria 2360
102 Ga0496121_0191921 3300048924 Bacteria 1464
103 Ga0496122_0010203 3300048925 Bacteria 9734
104 Ga0496123_0102218 3300048926 Bacteria 1664
105 Ga0496124_0133052 3300048927 Bacteria 1973
106 Ga0496125_0012040 3300048928 Bacteria 8611
107 Ga0496125_0015789 3300048928 Bacteria 7277
108 Ga0501223_000054 3300049663 Bacteria 38195
109 Ga0501246_000569 3300049676 Bacteria 2694
110 Ga0501257_000083 3300049686 Bacteria 23257
111 Ga0501225_0000004 3300049705 Bacteria 140738
112 Ga0501280_000804 3300049776 Bacteria 6823
113 nmdc:mga0k408_87239_c1 3300050493 Bacteria 1832
114 nmdc:mga06z11_83_c1 3300050494 Bacteria 40158
115 nmdc:mga04h51_17_c1 3300050495 Bacteria 75055
116 nmdc:mga07m45_52074_c1 3300050496 Bacteria 2310
117 Ga0500635_0000140 3300053080 Bacteria 41240
118 Ga0500578_0138573 3300053086 Bacteria 1522
119 Ga0500643_001612 3300053087 Bacteria 12627
120 Ga0500651_0004358 3300053093 Bacteria 7910
121 Ga0500641_0009386 3300053096 Bacteria 3519
122 Ga0500592_016978 3300053116 Bacteria 1169
123 Ga0500614_003318 3300053123 Bacteria 3474
124 Ga0500642_0000626 3300053130 Bacteria 10542
125 Ga0500655_000017 3300053133 Bacteria 46539
126 Ga0500655_003068 3300053133 Bacteria 3030
127 Ga0500559_0110018 3300053136 Bacteria 1276
128 Ga0500573_0000022 3300053140 Bacteria 154562
129 Ga0500577_0014622 3300053142 Bacteria 2431
130 Ga0500577_0056971 3300053142 Bacteria 1490
131 Ga0500590_000414 3300053148 Bacteria 14377
132 Ga0500616_0078321 3300053153 Bacteria 1667
133 Ga0500639_009529 3300053163 Bacteria 5078
134 Ga0500636_0123406 3300053177 Bacteria 1451
135 Ga0500570_000317 3300053724 Bacteria 17251
136 Ga0500645_003273 3300053730 Bacteria 6679
137 Ga0500587_011757 3300053739 Bacteria 1105

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005356 Ga0070674_100042164 Ga0070674_1000421643 186
2 3300005457 Ga0070662_100831469 Ga0070662_1008314691 186
3 3300025937 Ga0207669_10021542 Ga0207669_100215423 186
4 iso_pu_bacteria 2751185897 2753764400 200
5 3300048927 Ga0496124_0133052 Ga0496124_0133052_1240_1905 201
6 3300048928 Ga0496125_0012040 Ga0496125_0012040_1971_2636 201
7 3300005262 Ga0065165_1002965 Ga0065165_10029655 202
8 3300005355 Ga0070671_100143262 Ga0070671_1001432622 202
9 3300009148 Ga0105243_10071568 Ga0105243_100715683 202
10 3300011119 Ga0105246_10085092 Ga0105246_100850922 202
11 3300032004 Ga0307414_10585861 Ga0307414_105858612 202
12 3300053116 Ga0500592_016978 Ga0500592_016978_360_968 202
13 3300046660 Ga0495625_0002025 Ga0495625_0002025_5534_6157 203
14 3300006042 Ga0075368_10000070 Ga0075368_1000007013 204
15 3300006048 Ga0075363_100001786 Ga0075363_10000178610 204
16 3300006178 Ga0075367_10000247 Ga0075367_1000024715 204
17 3300027866 Ga0209813_10000031 Ga0209813_1000003150 204
18 3300031911 Ga0307412_10009228 Ga0307412_100092284 204
19 3300047472 Ga0495686_0017706 Ga0495686_0017706_3546_4160 204
20 3300050494 nmdc:mga06z11_83_c1 nmdc:mga06z11_83_c1_11656_12270 204
21 3300050495 nmdc:mga04h51_17_c1 nmdc:mga04h51_17_c1_53913_54527 204
22 3300050496 nmdc:mga07m45_52074_c1 nmdc:mga07m45_52074_c1_854_1468 204
23 3300049663 Ga0501223_000054 Ga0501223_000054_16049_16666 205
24 3300049676 Ga0501246_000569 Ga0501246_000569_870_1487 205
25 3300049705 Ga0501225_0000004 Ga0501225_0000004_86507_87124 205
26 iso_pu_bacteria 3002141150 3002142283 205
27 3300009177 Ga0105248_10001125 Ga0105248_100011256 207
28 3300025941 Ga0207711_10007265 Ga0207711_100072656 207
29 3300031548 Ga0307408_100039159 Ga0307408_1000391593 207
30 3300039062 Ga0400483_257217 Ga0400483_257217_1579_2211 207
31 3300046512 Ga0495610_0000136 Ga0495610_0000136_43292_43915 207
32 iso_pu_bacteria 2643221605 2644039284 207
33 iso_pu_bacteria 2946787523 2946788586 207
34 3300003794 Ga0055531_10049806 Ga0055531_100498062 208
35 3300005548 Ga0070665_100865237 Ga0070665_1008652371 208
36 3300025304 Ga0209257_1009954 Ga0209257_10099544 208
37 3300041505 Ga0451849_1542000 Ga0451849_1542000_36_797 208
38 3300046522 Ga0495643_0000107 Ga0495643_0000107_36151_36825 208
39 3300048920 Ga0496117_0013234 Ga0496117_0013234_812_1465 208
40 3300048923 Ga0496120_0088643 Ga0496120_0088643_45_698 208
41 3300048924 Ga0496121_0014736 Ga0496121_0014736_5087_5740 208
42 3300048925 Ga0496122_0010203 Ga0496122_0010203_410_1063 208
43 3300048926 Ga0496123_0102218 Ga0496123_0102218_666_1319 208
44 iso_pu_bacteria 2808606401 2809062708 208
45 3300005339 Ga0070660_100258598 Ga0070660_1002585982 209
46 3300025907 Ga0207645_10217783 Ga0207645_102177831 209
47 3300031456 Ga0307513_10412112 Ga0307513_104121121 209
48 3300031730 Ga0307516_10000136 Ga0307516_100001368 209
49 3300046475 Ga0495639_0029594 Ga0495639_0029594_270_926 209
50 3300046511 Ga0495608_0070023 Ga0495608_0070023_139_840 209
51 3300048909 Ga0496106_0037031 Ga0496106_0037031_843_1544 209
52 3300048924 Ga0496121_0191921 Ga0496121_0191921_116_817 209
53 3300053080 Ga0500635_0000140 Ga0500635_0000140_11497_12225 209
54 3300053086 Ga0500578_0138573 Ga0500578_0138573_255_956 209
55 3300053140 Ga0500573_0000022 Ga0500573_0000022_55093_55833 209
56 3300053142 Ga0500577_0056971 Ga0500577_0056971_339_983 209
57 3300053153 Ga0500616_0078321 Ga0500616_0078321_755_1390 209
58 3300053730 Ga0500645_003273 Ga0500645_003273_4440_5141 209
59 3300053739 Ga0500587_011757 Ga0500587_011757_246_947 209
60 3300005355 Ga0070671_100012219 Ga0070671_1000122194 210
61 3300005367 Ga0070667_100001044 Ga0070667_10000104417 210
62 3300005841 Ga0068863_100002111 Ga0068863_1000021118 210
63 3300005841 Ga0068863_100008391 Ga0068863_1000083913 210
64 3300005843 Ga0068860_100078316 Ga0068860_1000783162 210
65 3300025931 Ga0207644_10137424 Ga0207644_101374242 210
66 3300025986 Ga0207658_10000995 Ga0207658_1000099515 210
67 3300026088 Ga0207641_10002967 Ga0207641_100029672 210
68 3300026088 Ga0207641_10007009 Ga0207641_100070094 210
69 3300028381 Ga0268264_10279624 Ga0268264_102796242 210
70 3300031911 Ga0307412_10005285 Ga0307412_100052854 210
71 3300031911 Ga0307412_10054387 Ga0307412_100543872 210
72 3300046520 Ga0495637_0092635 Ga0495637_0092635_14_763 210
73 3300046538 Ga0495609_0058286 Ga0495609_0058286_187_852 210
74 3300046539 Ga0495621_0084381 Ga0495621_0084381_153_818 210
75 3300046542 Ga0495597_0019378 Ga0495597_0019378_2199_2864 210
76 3300053093 Ga0500651_0004358 Ga0500651_0004358_3941_4657 210
77 3300053096 Ga0500641_0009386 Ga0500641_0009386_265_981 210
78 3300053130 Ga0500642_0000626 Ga0500642_0000626_4411_5127 210
79 3300053133 Ga0500655_000017 Ga0500655_000017_34367_35083 210
80 3300053142 Ga0500577_0014622 Ga0500577_0014622_1513_2151 210
81 3300053148 Ga0500590_000414 Ga0500590_000414_13467_14132 210
82 3300053724 Ga0500570_000317 Ga0500570_000317_3779_4444 210
83 3300005578 Ga0068854_100001374 Ga0068854_1000013742 211
84 3300025961 Ga0207712_10045557 Ga0207712_100455573 211
85 3300046522 Ga0495643_0035930 Ga0495643_0035930_1991_2710 211
86 3300046660 Ga0495625_0072317 Ga0495625_0072317_86_838 211
87 3300047470 Ga0495681_0124119 Ga0495681_0124119_148_816 211
88 3300047472 Ga0495686_0000057 Ga0495686_0000057_170894_171529 211
89 3300053123 Ga0500614_003318 Ga0500614_003318_430_1149 211
90 3300053133 Ga0500655_003068 Ga0500655_003068_1284_1952 211
91 3300053136 Ga0500559_0110018 Ga0500559_0110018_147_788 211
92 3300053163 Ga0500639_009529 Ga0500639_009529_122_841 211
93 3300053177 Ga0500636_0123406 Ga0500636_0123406_16_684 211
94 iso_pu_bacteria 8002392321 8002395485 211
95 3300005288 Ga0065714_10202247 Ga0065714_102022472 212
96 3300005327 Ga0070658_10165971 Ga0070658_101659712 212
97 3300005327 Ga0070658_10652496 Ga0070658_106524961 212
98 3300005344 Ga0070661_100246527 Ga0070661_1002465272 212
99 3300005614 Ga0068856_100028648 Ga0068856_1000286482 212
100 3300025909 Ga0207705_10000084 Ga0207705_1000008440 212
101 3300025920 Ga0207649_10142926 Ga0207649_101429262 212
102 3300026078 Ga0207702_10020749 Ga0207702_100207496 212
103 3300031911 Ga0307412_10000122 Ga0307412_100001228 212
104 3300049686 Ga0501257_000083 Ga0501257_000083_8433_9071 212
105 3300049776 Ga0501280_000804 Ga0501280_000804_346_984 212
106 3300050493 nmdc:mga0k408_87239_c1 nmdc:mga0k408_87239_c1_63_707 212
107 3300053087 Ga0500643_001612 Ga0500643_001612_5333_6067 212
108 3300031665 Ga0316575_10001621 Ga0316575_100016214 213
109 3300037418 Ga0395900_0056884 Ga0395900_0056884_1771_2454 213
110 3300037466 Ga0395898_0262342 Ga0395898_0262342_822_1505 213
111 3300041486 Ga0451807_0335378 Ga0451807_0335378_154_816 213
112 3300048090 Ga0495615_0109934 Ga0495615_0109934_79_768 213
113 3300048924 Ga0496121_0010433 Ga0496121_0010433_1838_2494 213
114 3300048928 Ga0496125_0015789 Ga0496125_0015789_1050_1706 213
115 3300001976 JGI24752J21851_1000160 JGI24752J21851_10001607 215
116 3300005289 Ga0065704_10076185 Ga0065704_100761855 215
117 3300005331 Ga0070670_100000014 Ga0070670_100000014129 215
118 3300005367 Ga0070667_100000144 Ga0070667_10000014464 215
119 3300005367 Ga0070667_100050056 Ga0070667_1000500563 215
120 3300005618 Ga0068864_100000021 Ga0068864_100000021140 215
121 3300005841 Ga0068863_100000009 Ga0068863_100000009147 215
122 3300005842 Ga0068858_100346081 Ga0068858_1003460812 215
123 3300005844 Ga0068862_100000017 Ga0068862_100000017143 215
124 3300009011 Ga0105251_10000507 Ga0105251_1000050735 215
125 3300009101 Ga0105247_10021311 Ga0105247_100213111 215
126 3300009177 Ga0105248_10000030 Ga0105248_1000003069 215
127 3300009553 Ga0105249_10000137 Ga0105249_1000013778 215
128 3300014325 Ga0163163_10209325 Ga0163163_102093252 215
129 3300014968 Ga0157379_10041703 Ga0157379_100417033 215
130 3300025735 Ga0207713_1027687 Ga0207713_10276872 215
131 3300025925 Ga0207650_10000095 Ga0207650_1000009593 215
132 3300025941 Ga0207711_10000029 Ga0207711_1000002969 215
133 3300025961 Ga0207712_10000734 Ga0207712_1000073412 215
134 3300025986 Ga0207658_10001866 Ga0207658_100018662 215
135 3300026088 Ga0207641_10000017 Ga0207641_10000017167 215
136 3300026095 Ga0207676_10000037 Ga0207676_10000037119 215
137 3300028380 Ga0268265_10000025 Ga0268265_1000002596 215
138 3300036712 Ga0316584_0197442 Ga0316584_0197442_351_1016 215
139 3300046528 Ga0495642_0082098 Ga0495642_0082098_126_845 215
140 3300048906 Ga0496103_0025332 Ga0496103_0025332_2166_2813 215
141 3300048920 Ga0496117_0005000 Ga0496117_0005000_4451_5098 215
142 3300048921 Ga0496118_0000216 Ga0496118_0000216_95903_96550 215
143 3300048924 Ga0496121_0092350 Ga0496121_0092350_125_772 215

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13410

GST_C_2

Glutathione S-transferase, C-terminal domain

141

220

0.96

PF13409

GST_N_2

Glutathione S-transferase, N-terminal domain

49

114

0.95

PF02798

GST_N

Glutathione S-transferase, N-terminal domain

41

113

0.93

PF13417

GST_N_3

Glutathione S-transferase, N-terminal domain

44

120

0.93

PF00043

GST_C

Glutathione S-transferase, C-terminal domain

146

225

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ikh-assembly1.cif.gz_A-2 crystal structure of a glutathione transferase family member from pseudomonas fluorescens pf-5, target efi-900003, with two glutathione bound 0.8753 3 195
3q19-assembly1.cif.gz_B human glutathione transferase o2 0.8722 1 197
6f05-assembly3.cif.gz_I-3 arabidopsis thaliana gstf9, gso3 bound 0.8703 4 194
6f05-assembly6.cif.gz_H arabidopsis thaliana gstf9, gso3 bound 0.869 4 194
4zb8-assembly1.cif.gz_A crystal structure of the glutathione transferase ure2p6 from phanerochaete chrysosporium in complex with oxidized glutathione. 0.8672 2 194
ID Description Score Start End Superfamily
af_A0A1D6QGT9_2_79_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.917 4 66 3.40.30.10
af_A0A1D6IL16_82_151_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9157 3 58 3.40.30.10
af_P0ACA3_4_88_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9126 3 80 3.40.30.10
3ay8A01 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9101 4 76 3.40.30.10
af_Q9VSL2_5_102_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.9081 2 74 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A354U3J2-F1-model_v4 deleted 0.9911 4 84
AF-A0A437M8B3-F1-model_v4 Glutathione S-transferase 0.9873 4 203 GO:0005737
GO:0016740
AF-A0A0Q4HLY7-F1-model_v4 deleted 0.9869 4 210
AF-A0A521NWB3-F1-model_v4 Glutathione S-transferase 0.9867 4 210 GO:0005737
GO:0016740
AF-A0A315CD92-F1-model_v4 Glutathione S-transferase 0.9862 4 203 GO:0005737
GO:0016740

Feature Viewer

pLDDT pTM Quality
94.99 0.91 High
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Predicted Structure (AlphaFold2)

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