F189584

General Info

Members Datasets Scaffolds Average Seq Length
143 66 286 266

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0080763|Ga0453684_0080763_1099_1971
Length 290
Sequence MNFLLAIFKLWNLAHYNMSMTTWRLLHTPAATGAWNMAVDESILEHIYRGESMPTLRLYSWNPPCLSLGHAQPFADVDMQRLKSHGWEVVRRATGGRAILHTDELTYSVTGREDDPVLVGGILESYNRIAQALMYAVRELGLPVEMKEHADQPATKTQNPVCFEVPSTYEITVNGKKLIGSAQARKKEGVLQHGSLPLTGDLTRICQALVFKDEPAREIASQRLLTRATTVESVIGEKKDWETAAQAFVRGFEVQLGISFESGVLSPSEEKRAAELVEKKYAHPSWTEKS

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
37 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
38 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
39 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
40 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
41 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
42 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
43 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
44 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
45 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
46 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
47 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
48 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
49 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
50 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
51 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
52 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
53 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
54 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
55 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
56 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
57 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
58 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
59 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
60 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
61 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
62 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
63 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
64 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
65 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
66 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.7
Rhizosphere 99.3
Stem 0
Stem Tuber 0
Unclassified 16.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0080763 3300044712 Bacteria 4058
2 SwRhRL2b_contig_1172561 2162886007 Unclassified 4915
3 JGI25406J46586_10000277 3300003203 Bacteria 22810
4 Ga0065704_10070349 3300005289 Bacteria 30812
5 Ga0065707_10006102 3300005295 Unclassified 4313
6 Ga0065707_10081976 3300005295 Bacteria 26469
7 Ga0070689_100235633 3300005340 Bacteria 1506
8 Ga0070687_100078084 3300005343 Bacteria 1798
9 Ga0070694_100025410 3300005444 Bacteria 3831
10 Ga0070706_100026889 3300005467 Bacteria 5295
11 Ga0070706_100094701 3300005467 Unclassified 2771
12 Ga0070698_100114320 3300005471 Bacteria 2664
13 Ga0070699_100018232 3300005518 Bacteria 6031
14 Ga0070699_100027274 3300005518 Bacteria 4928
15 Ga0070699_100103163 3300005518 Bacteria 2501
16 Ga0070696_100017916 3300005546 Bacteria 4782
17 Ga0070704_100056764 3300005549 Bacteria 2781
18 Ga0068857_100181403 3300005577 Unclassified 1916
19 Ga0068859_100082048 3300005617 Unclassified 3267
20 Ga0068862_100077591 3300005844 Bacteria 2877
21 Ga0081539_10000947 3300005985 Bacteria 54424
22 Ga0081539_10024655 3300005985 Bacteria 3896
23 Ga0075427_10000135 3300006194 Bacteria 6709
24 Ga0075428_100033263 3300006844 Bacteria 5694
25 Ga0075430_100213327 3300006846 Bacteria 1602
26 Ga0075431_100020455 3300006847 Bacteria 6761
27 Ga0075431_100133215 3300006847 Unclassified 2563
28 Ga0075431_100431553 3300006847 Bacteria 1316
29 Ga0075433_10065155 3300006852 Unclassified 3195
30 Ga0075434_100120043 3300006871 Bacteria 2644
31 Ga0075434_100361436 3300006871 Bacteria 1473
32 Ga0075429_100001547 3300006880 Bacteria 18875
33 Ga0075429_100020215 3300006880 Bacteria 5774
34 Ga0075429_100030548 3300006880 Bacteria 4680
35 Ga0075429_100050544 3300006880 Bacteria 3617
36 Ga0075429_100077602 3300006880 Bacteria 2894
37 Ga0097620_100082048 3300006931 Unclassified 3267
38 Ga0114129_10000602 3300009147 Bacteria 44422
39 Ga0114129_10003846 3300009147 Bacteria 21166
40 Ga0114129_10009793 3300009147 Bacteria 13669
41 Ga0114129_10012166 3300009147 Bacteria 12244
42 Ga0114129_10033990 3300009147 Bacteria 7202
43 Ga0105243_10309870 3300009148 Bacteria 1434
44 Ga0105242_10460385 3300009176 Bacteria 1201
45 Ga0105249_10005429 3300009553 Bacteria 11004
46 Ga0207643_10279336 3300025908 Bacteria 1035
47 Ga0207643_10366300 3300025908 Unclassified 907
48 Ga0207684_10248142 3300025910 Unclassified 1536
49 Ga0207662_10083850 3300025918 Bacteria 1949
50 Ga0207670_10189233 3300025936 Bacteria 1556
51 Ga0207674_10094239 3300026116 Bacteria 2981
52 Ga0268265_10009413 3300028380 Bacteria 6598
53 Ga0268265_10176914 3300028380 Bacteria 1830
54 Ga0307408_100328540 3300031548 Bacteria 1291
55 Ga0316579_10000997 3300031691 Bacteria 9944
56 Ga0316576_10343566 3300031727 Unclassified 1111
57 Ga0316578_10319296 3300031728 Bacteria 927
58 Ga0316577_10000965 3300031733 Bacteria 12826
59 Ga0316577_10105909 3300031733 Bacteria 1577
60 Ga0307410_10068085 3300031852 Bacteria 2458
61 Ga0307406_10238823 3300031901 Bacteria 1362
62 Ga0307416_100644015 3300032002 Bacteria 1144
63 Ga0307415_100596929 3300032126 Unclassified 982
64 Ga0316574_0001700 3300035398 Bacteria 10643
65 Ga0316584_0002026 3300036712 Bacteria 12675
66 Ga0316584_0055284 3300036712 Bacteria 2972
67 Ga0451577_0009437 3300042876 Bacteria 9400
68 Ga0451577_0016180 3300042876 Bacteria 6914
69 Ga0451577_0022974 3300042876 Bacteria 5692
70 Ga0451577_0078055 3300042876 Bacteria 2953
71 Ga0451577_0133550 3300042876 Bacteria 2227
72 Ga0451577_0202407 3300042876 Bacteria 1792
73 Ga0451577_0228691 3300042876 Bacteria 1681
74 Ga0451577_0451341 3300042876 Unclassified 1168
75 Ga0453683_0000296 3300044673 Bacteria 63665
76 Ga0453683_0047110 3300044673 Bacteria 2702
77 Ga0453683_0322282 3300044673 Bacteria 990
78 Ga0453683_0413142 3300044673 Bacteria 870
79 Ga0453684_0000012 3300044712 Bacteria 1062512
80 Ga0453684_0000023 3300044712 Bacteria 857153
81 Ga0453684_0000541 3300044712 Bacteria 143452
82 Ga0453684_0001179 3300044712 Bacteria 81099
83 Ga0453684_0001229 3300044712 Bacteria 78474
84 Ga0453684_0002674 3300044712 Bacteria 42462
85 Ga0453684_0004664 3300044712 Bacteria 28464
86 Ga0453684_0015591 3300044712 Bacteria 11995
87 Ga0453684_0020352 3300044712 Bacteria 10018
88 Ga0453684_0028201 3300044712 Bacteria 8023
89 Ga0453684_0058083 3300044712 Bacteria 5000
90 Ga0453684_0065201 3300044712 Bacteria 4646
91 Ga0453684_0081107 3300044712 Bacteria 4047
92 Ga0453684_0129111 3300044712 Bacteria 3035
93 Ga0453684_0130103 3300044712 Bacteria 3022
94 Ga0453684_0139383 3300044712 Bacteria 2899
95 Ga0453684_0181660 3300044712 Bacteria 2469
96 Ga0453684_0271578 3300044712 Bacteria 1937
97 Ga0453684_0275080 3300044712 Bacteria 1922
98 Ga0453684_0314534 3300044712 Bacteria 1775
99 Ga0453684_0339816 3300044712 Bacteria 1696
100 Ga0453684_0347669 3300044712 Bacteria 1673
101 Ga0453684_0535312 3300044712 Bacteria 1292
102 Ga0453684_0674836 3300044712 Bacteria 1125
103 Ga0453684_0706108 3300044712 Bacteria 1095
104 Ga0451576_0023712 3300045051 Bacteria 6639
105 Ga0451576_0093058 3300045051 Bacteria 3134
106 Ga0451576_0095444 3300045051 Bacteria 3093
107 Ga0451576_0184437 3300045051 Bacteria 2179
108 Ga0451576_0231537 3300045051 Unclassified 1930
109 Ga0451576_0363418 3300045051 Unclassified 1516
110 Ga0496107_0300470 3300048910 Unclassified 1195
111 Ga0501299_015524 3300049522 Bacteria 1339
112 Ga0501034_0114102 3300049571 Bacteria 2691
113 Ga0501071_0078565 3300049587 Unclassified 2412
114 Ga0501072_0349918 3300049588 Bacteria 1173
115 Ga0501074_0150653 3300049590 Bacteria 1663
116 Ga0501074_0193519 3300049590 Unclassified 1450
117 Ga0501076_0021690 3300049592 Bacteria 4930
118 Ga0501077_0147607 3300049593 Unclassified 1492
119 Ga0501079_0210487 3300049741 Bacteria 1519
120 Ga0501081_0054469 3300049743 Unclassified 2764
121 Ga0501081_0153120 3300049743 Bacteria 1657
122 nmdc:mga05p37_127242_c1 3300050507 Bacteria 3128
123 nmdc:mga05p37_22949_c1 3300050507 Bacteria 7569
124 nmdc:mga05p37_5148_c1 3300050507 Bacteria 15329
125 nmdc:mga05p37_72374_c1 3300050507 Bacteria 4242
126 nmdc:mga05p37_89377_c1 3300050507 Bacteria 3796
127 nmdc:mga05p37_96008_c1 3300050507 Bacteria 3652
128 nmdc:mga09592_121173_c1 3300050508 Bacteria 2247
129 nmdc:mga09592_124969_c1 3300050508 Bacteria 2211
130 nmdc:mga09592_497_c1 3300050508 Bacteria 29593
131 nmdc:mga09592_54098_c1 3300050508 Bacteria 3391
132 nmdc:mga09592_648387_c1 3300050508 Unclassified 902
133 nmdc:mga09592_91480_c1 3300050508 Bacteria 2600
134 nmdc:mga09592_98435_c1 3300050508 Unclassified 2503
135 nmdc:mga0qj67_221759_c1 3300050509 Bacteria 1535
136 nmdc:mga06r32_129619_c1 3300050510 Unclassified 2493
137 nmdc:mga06r32_67858_c1 3300050510 Bacteria 3444
138 nmdc:mga0n895_235890_c1 3300050512 Bacteria 1856
139 Ga0501084_0015684 3300054114 Bacteria 6285
140 Ga0501084_0054213 3300054114 Bacteria 3354
141 Ga0501084_0399112 3300054114 Bacteria 1162
142 Ga0530510_0208852 3300061734 Bacteria 1451
143 Ga0530510_0485286 3300061734 Unclassified 936
144 Ga0453684_0080763
145 SwRhRL2b_contig_1172561
146 JGI25406J46586_10000277
147 Ga0065704_10070349
148 Ga0065707_10006102
149 Ga0065707_10081976
150 Ga0070689_100235633
151 Ga0070687_100078084
152 Ga0070694_100025410
153 Ga0070706_100026889
154 Ga0070706_100094701
155 Ga0070698_100114320
156 Ga0070699_100018232
157 Ga0070699_100027274
158 Ga0070699_100103163
159 Ga0070696_100017916
160 Ga0070704_100056764
161 Ga0068857_100181403
162 Ga0068859_100082048
163 Ga0068862_100077591
164 Ga0081539_10000947
165 Ga0081539_10024655
166 Ga0075427_10000135
167 Ga0075428_100033263
168 Ga0075430_100213327
169 Ga0075431_100020455
170 Ga0075431_100133215
171 Ga0075431_100431553
172 Ga0075433_10065155
173 Ga0075434_100120043
174 Ga0075434_100361436
175 Ga0075429_100001547
176 Ga0075429_100020215
177 Ga0075429_100030548
178 Ga0075429_100050544
179 Ga0075429_100077602
180 Ga0097620_100082048
181 Ga0114129_10000602
182 Ga0114129_10003846
183 Ga0114129_10009793
184 Ga0114129_10012166
185 Ga0114129_10033990
186 Ga0105243_10309870
187 Ga0105242_10460385
188 Ga0105249_10005429
189 Ga0207643_10279336
190 Ga0207643_10366300
191 Ga0207684_10248142
192 Ga0207662_10083850
193 Ga0207670_10189233
194 Ga0207674_10094239
195 Ga0268265_10009413
196 Ga0268265_10176914
197 Ga0307408_100328540
198 Ga0316579_10000997
199 Ga0316576_10343566
200 Ga0316578_10319296
201 Ga0316577_10000965
202 Ga0316577_10105909
203 Ga0307410_10068085
204 Ga0307406_10238823
205 Ga0307416_100644015
206 Ga0307415_100596929
207 Ga0316574_0001700
208 Ga0316584_0002026
209 Ga0316584_0055284
210 Ga0451577_0009437
211 Ga0451577_0016180
212 Ga0451577_0022974
213 Ga0451577_0078055
214 Ga0451577_0133550
215 Ga0451577_0202407
216 Ga0451577_0228691
217 Ga0451577_0451341
218 Ga0453683_0000296
219 Ga0453683_0047110
220 Ga0453683_0322282
221 Ga0453683_0413142
222 Ga0453684_0000012
223 Ga0453684_0000023
224 Ga0453684_0000541
225 Ga0453684_0001179
226 Ga0453684_0001229
227 Ga0453684_0002674
228 Ga0453684_0004664
229 Ga0453684_0015591
230 Ga0453684_0020352
231 Ga0453684_0028201
232 Ga0453684_0058083
233 Ga0453684_0065201
234 Ga0453684_0081107
235 Ga0453684_0129111
236 Ga0453684_0130103
237 Ga0453684_0139383
238 Ga0453684_0181660
239 Ga0453684_0271578
240 Ga0453684_0275080
241 Ga0453684_0314534
242 Ga0453684_0339816
243 Ga0453684_0347669
244 Ga0453684_0535312
245 Ga0453684_0674836
246 Ga0453684_0706108
247 Ga0451576_0023712
248 Ga0451576_0093058
249 Ga0451576_0095444
250 Ga0451576_0184437
251 Ga0451576_0231537
252 Ga0451576_0363418
253 Ga0496107_0300470
254 Ga0501299_015524
255 Ga0501034_0114102
256 Ga0501071_0078565
257 Ga0501072_0349918
258 Ga0501074_0150653
259 Ga0501074_0193519
260 Ga0501076_0021690
261 Ga0501077_0147607
262 Ga0501079_0210487
263 Ga0501081_0054469
264 Ga0501081_0153120
265 nmdc:mga05p37_127242_c1
266 nmdc:mga05p37_22949_c1
267 nmdc:mga05p37_5148_c1
268 nmdc:mga05p37_72374_c1
269 nmdc:mga05p37_89377_c1
270 nmdc:mga05p37_96008_c1
271 nmdc:mga09592_121173_c1
272 nmdc:mga09592_124969_c1
273 nmdc:mga09592_497_c1
274 nmdc:mga09592_54098_c1
275 nmdc:mga09592_648387_c1
276 nmdc:mga09592_91480_c1
277 nmdc:mga09592_98435_c1
278 nmdc:mga0qj67_221759_c1
279 nmdc:mga06r32_129619_c1
280 nmdc:mga06r32_67858_c1
281 nmdc:mga0n895_235890_c1
282 Ga0501084_0015684
283 Ga0501084_0054213
284 Ga0501084_0399112
285 Ga0530510_0208852
286 Ga0530510_0485286

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21948

LplA-B_cat

Lipoyl protein ligase A/B catalytic domain

32

253

0.94

PF03099

BPL_LplA_LipB

Biotin/lipoate A/B protein ligase family

70

201

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2c8m-assembly1.cif.gz_A structure of protein ta0514, putative lipoate protein ligase from t. acidophilum with bound lipoic acid 0.8741 3 258
3r07-assembly1.cif.gz_A structural analysis of an archaeal lipoylation system. a bi-partite lipoate protein ligase and its e2 lipoyl domain from thermoplasma acidophilum 0.8631 1 258
2c8m-assembly4.cif.gz_D structure of protein ta0514, putative lipoate protein ligase from t. acidophilum with bound lipoic acid 0.8611 3 259
2c8m-assembly1.cif.gz_A structure of protein ta0514, putative lipoate protein ligase from t. acidophilum with bound lipoic acid 0.8605 3 258
2c7i-assembly3.cif.gz_C structure of protein ta0514, putative lipoate protein ligase from t. acidophilum. 0.858 3 258
ID Description Score Start End Superfamily
af_Q2FY37_5_276_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8749 4 260 3.30.930.10
3r07A00 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8631 1 258 3.30.930.10
af_Q2FY37_5_276_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8621 4 260 3.30.930.10
3r07A00 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8343 1 258 3.30.930.10
2qhuA01 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7763 5 227 3.30.930.10
ID Description Score Start End GO Terms
AF-A0A7V1FAM8-F1-model_v4 Lipoate--protein ligase family protein 0.9907 1 90 GO:0016874
GO:0036211
AF-A0A850ATM7-F1-model_v4 deleted 0.9874 1 116
AF-A0A7C4PPG7-F1-model_v4 Octanoyltransferase 0.9659 2 121 GO:0016740
GO:0036211
AF-A0A7V1FAM8-F1-model_v4 Lipoate--protein ligase family protein 0.959 1 90 GO:0016874
GO:0036211
AF-A0A7C5MAR1-F1-model_v4 Lipoate--protein ligase family protein 0.954 1 114 GO:0016874
GO:0036211

Map