F189213

General Info

Members Datasets Scaffolds Average Seq Length
143 69 286 256

Family's Representative Sequence

Representative Sequence 3300031665|Ga0316575_10028489|Ga0316575_100284892
Length 286
Sequence MSPGGATSTLVDRVHSASLSVNLQRPDSNRYETMSTLSALLFDVDGTLADTERDGHRVAFNRAFADAGLEWVWSEELYGKLLAVTGGKERIRYYLDNFNTAFPRPVELDDYIADLHKAKTRHYVQMLGEGLIPLRPGVRRLLIEAREAGLRLAVATTTTPENVSALLQNALAPDAMEWFEVIAAGDVVAAKKPAPDIYSYAMDKMGLEPAHCIAFEDSHNGIRSSLGAGLKTIVAVNGYTRAEDFSGAAIVLDHWGEPEQPFTVLSGDAAGATYLDLALVKRLHGS

Samples

Sample ID Description Type Environment
1 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
18 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
20 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
21 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
22 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
31 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
32 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
33 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
34 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
35 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
36 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
37 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
38 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
39 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
40 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
41 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
42 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
43 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
44 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
45 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
46 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
47 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
48 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
49 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
50 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
51 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
52 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
53 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
54 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
55 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
56 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
57 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
63 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
64 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
65 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
66 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
67 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
68 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
69 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.2
Metatranscriptomes 2.8
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.1
Nodule 0
Rhizoplane 0
Rhizosphere 76.92
Stem 0
Stem Tuber 0
Unclassified 7.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316575_10028489 3300031665 Bacteria 2178
2 rootH2_10018597 3300003320 Bacteria 14864
3 Ga0070683_100889943 3300005329 Bacteria 854
4 Ga0070674_100156790 3300005356 Bacteria 1723
5 Ga0070694_100240618 3300005444 Bacteria 1365
6 Ga0070678_100009152 3300005456 Bacteria 5981
7 Ga0070678_100130353 3300005456 Bacteria 1997
8 Ga0070706_100138740 3300005467 Unclassified 2269
9 Ga0070706_100203043 3300005467 Bacteria 1851
10 Ga0070707_100017536 3300005468 Bacteria 6733
11 Ga0070698_100002991 3300005471 Bacteria 18611
12 Ga0070699_100191388 3300005518 Bacteria 1817
13 Ga0070697_100026780 3300005536 Bacteria 4610
14 Ga0070697_100075118 3300005536 Bacteria 2777
15 Ga0070695_100057677 3300005545 Bacteria 2509
16 Ga0070695_100148106 3300005545 Bacteria 1635
17 Ga0068859_100046506 3300005617 Bacteria 4358
18 Ga0068860_100189511 3300005843 Unclassified 1990
19 Ga0068862_100053881 3300005844 Bacteria 3444
20 Ga0070717_10058156 3300006028 Bacteria 3197
21 Ga0075366_10007946 3300006195 Bacteria 5871
22 Ga0075366_10094582 3300006195 Bacteria 1791
23 Ga0097620_100046506 3300006931 Bacteria 4358
24 Ga0105242_10237334 3300009176 Bacteria 1637
25 Ga0163162_10041955 3300013306 Bacteria 4578
26 Ga0157375_10151207 3300013308 Bacteria 2457
27 Ga0207684_10175711 3300025910 Unclassified 1846
28 Ga0207684_10285532 3300025910 Bacteria 1423
29 Ga0207686_10286392 3300025934 Bacteria 1218
30 Ga0207669_10036453 3300025937 Bacteria 2811
31 Ga0207704_10095762 3300025938 Bacteria 1963
32 Ga0207665_10024149 3300025939 Bacteria 4007
33 Ga0207689_10183706 3300025942 Unclassified 1724
34 Ga0207640_10209760 3300025981 Bacteria 1483
35 Ga0207683_10023265 3300026121 Bacteria 5327
36 Ga0207683_10111316 3300026121 Bacteria 2452
37 Ga0265324_10031770 3300029957 Bacteria 1848
38 Ga0265328_10000507 3300031239 Bacteria 18100
39 Ga0265331_10000518 3300031250 Bacteria 36001
40 Ga0265327_10001287 3300031251 Bacteria 32983
41 Ga0265327_10007658 3300031251 Bacteria 8272
42 Ga0316575_10001754 3300031665 Bacteria 7100
43 Ga0316575_10043976 3300031665 Bacteria 1771
44 Ga0316575_10050276 3300031665 Bacteria 1659
45 Ga0316575_10062636 3300031665 Bacteria 1488
46 Ga0316575_10071849 3300031665 Bacteria 1391
47 Ga0316579_10003803 3300031691 Bacteria 5943
48 Ga0316579_10011782 3300031691 Bacteria 3725
49 Ga0316576_10004429 3300031727 Bacteria 8418
50 Ga0316576_10005975 3300031727 Bacteria 7521
51 Ga0316576_10123012 3300031727 Bacteria 1949
52 Ga0316576_10335692 3300031727 Bacteria 1126
53 Ga0316578_10000911 3300031728 Bacteria 11177
54 Ga0316578_10015475 3300031728 Bacteria 4102
55 Ga0316577_10014622 3300031733 Bacteria 4309
56 Ga0316577_10021789 3300031733 Bacteria 3556
57 Ga0316577_10048924 3300031733 Unclassified 2360
58 Ga0307412_10135976 3300031911 Bacteria 1793
59 Ga0307412_10237410 3300031911 Bacteria 1408
60 Ga0316583_10000433 3300032133 Bacteria 12275
61 Ga0316583_10002728 3300032133 Bacteria 6173
62 Ga0316583_10041116 3300032133 Bacteria 1636
63 Ga0316583_10056598 3300032133 Bacteria 1377
64 Ga0316583_10081457 3300032133 Unclassified 1131
65 Ga0316585_10068242 3300032137 Bacteria 1153
66 Ga0316580_10004851 3300032139 Bacteria 3910
67 Ga0316593_10001742 3300032168 Bacteria 4931
68 Ga0316593_10015227 3300032168 Bacteria 2310
69 Ga0316593_10042792 3300032168 Bacteria 1511
70 Ga0316592_1006480 3300033524 Bacteria 2256
71 Ga0316574_0004631 3300035398 Bacteria 7239
72 Ga0316574_0025431 3300035398 Bacteria 3554
73 Ga0316574_0054136 3300035398 Unclassified 2506
74 Ga0316574_0063057 3300035398 Bacteria 2330
75 Ga0316574_0081194 3300035398 Bacteria 2059
76 Ga0316574_0144825 3300035398 Unclassified 1531
77 Ga0316582_0003666 3300036647 Bacteria 7587
78 Ga0316582_0010701 3300036647 Bacteria 5035
79 Ga0316582_0011156 3300036647 Bacteria 4959
80 Ga0316582_0016877 3300036647 Bacteria 4209
81 Ga0316582_0065630 3300036647 Bacteria 2337
82 Ga0316582_0113498 3300036647 Bacteria 1806
83 Ga0316582_0117628 3300036647 Bacteria 1776
84 Ga0316582_0161864 3300036647 Bacteria 1516
85 Ga0316582_0165716 3300036647 Bacteria 1498
86 Ga0316584_0021342 3300036712 Bacteria 4706
87 Ga0316584_0055389 3300036712 Bacteria 2969
88 Ga0316584_0060395 3300036712 Bacteria 2839
89 Ga0316584_0092074 3300036712 Bacteria 2270
90 Ga0316584_0131974 3300036712 Bacteria 1865
91 Ga0316584_0148331 3300036712 Bacteria 1747
92 Ga0316581_0000621 3300037588 Bacteria 7067
93 Ga0316581_0000772 3300037588 Bacteria 6607
94 Ga0316581_0001157 3300037588 Bacteria 5772
95 Ga0400484_03662 3300038725 Bacteria 37467
96 Ga0400484_31412 3300038725 Bacteria 7802
97 Ga0400490_32195 3300038726 Bacteria 18163
98 Ga0400490_39947 3300038726 Bacteria 13867
99 Ga0400490_54564 3300038726 Bacteria 5499
100 Ga0400490_59274 3300038726 Bacteria 8409
101 Ga0400485_11431 3300038735 Bacteria 142174
102 Ga0400488_24661 3300038741 Bacteria 5074
103 Ga0400488_41941 3300038741 Bacteria 2269
104 Ga0400488_45265 3300038741 Bacteria 2655
105 Ga0400488_46588 3300038741 Bacteria 5178
106 Ga0400488_55282 3300038741 Bacteria 2811
107 Ga0400488_60847 3300038741 Bacteria 2442
108 Ga0400486_00384 3300038742 Bacteria 2598
109 Ga0400486_13165 3300038742 Bacteria 18772
110 Ga0400486_18012 3300038742 Bacteria 99609
111 Ga0400486_20525 3300038742 Bacteria 2024
112 Ga0400483_063369 3300039062 Bacteria 24033
113 Ga0400483_069614 3300039062 Bacteria 4946
114 Ga0400483_141821 3300039062 Bacteria 11200
115 Ga0400483_151395 3300039062 Bacteria 12667
116 Ga0400483_203343 3300039062 Bacteria 8652
117 Ga0400483_272706 3300039062 Bacteria 6301
118 Ga0400483_272961 3300039062 Bacteria 9007
119 Ga0400487_11695 3300039110 Bacteria 5093
120 Ga0400487_15109 3300039110 Bacteria 1880
121 Ga0400487_37718 3300039110 Bacteria 3377
122 Ga0400487_41095 3300039110 Bacteria 1850
123 Ga0400487_51418 3300039110 Bacteria 2440
124 Ga0451577_0079614 3300042876 Unclassified 2921
125 Ga0453684_0003473 3300044712 Bacteria 35388
126 Ga0453684_0003951 3300044712 Bacteria 32421
127 Ga0453684_0004710 3300044712 Bacteria 28217
128 Ga0453684_0012170 3300044712 Bacteria 14268
129 Ga0501032_0002508 3300049569 Bacteria 14341
130 Ga0501034_0051189 3300049571 Bacteria 4164
131 Ga0501037_0028917 3300049573 Bacteria 4094
132 Ga0501038_0000828 3300049574 Bacteria 27543
133 Ga0501038_0227616 3300049574 Bacteria 1485
134 Ga0501039_0060038 3300049575 Bacteria 2944
135 Ga0501046_0003317 3300049580 Bacteria 14797
136 Ga0501070_0051538 3300049586 Bacteria 3416
137 Ga0501074_0069702 3300049590 Bacteria 2528
138 Ga0501075_0379366 3300049591 Unclassified 1078
139 Ga0501076_0087136 3300049592 Bacteria 2510
140 Ga0501080_0038217 3300049742 Bacteria 4482
141 Ga0501035_0047152 3300049822 Bacteria 3870
142 Ga0501035_0328430 3300049822 Unclassified 1284
143 nmdc:mga0k408_232712_c1 3300050493 Bacteria 1100
144 Ga0316575_10028489
145 rootH2_10018597
146 Ga0070683_100889943
147 Ga0070674_100156790
148 Ga0070694_100240618
149 Ga0070678_100009152
150 Ga0070678_100130353
151 Ga0070706_100138740
152 Ga0070706_100203043
153 Ga0070707_100017536
154 Ga0070698_100002991
155 Ga0070699_100191388
156 Ga0070697_100026780
157 Ga0070697_100075118
158 Ga0070695_100057677
159 Ga0070695_100148106
160 Ga0068859_100046506
161 Ga0068860_100189511
162 Ga0068862_100053881
163 Ga0070717_10058156
164 Ga0075366_10007946
165 Ga0075366_10094582
166 Ga0097620_100046506
167 Ga0105242_10237334
168 Ga0163162_10041955
169 Ga0157375_10151207
170 Ga0207684_10175711
171 Ga0207684_10285532
172 Ga0207686_10286392
173 Ga0207669_10036453
174 Ga0207704_10095762
175 Ga0207665_10024149
176 Ga0207689_10183706
177 Ga0207640_10209760
178 Ga0207683_10023265
179 Ga0207683_10111316
180 Ga0265324_10031770
181 Ga0265328_10000507
182 Ga0265331_10000518
183 Ga0265327_10001287
184 Ga0265327_10007658
185 Ga0316575_10001754
186 Ga0316575_10043976
187 Ga0316575_10050276
188 Ga0316575_10062636
189 Ga0316575_10071849
190 Ga0316579_10003803
191 Ga0316579_10011782
192 Ga0316576_10004429
193 Ga0316576_10005975
194 Ga0316576_10123012
195 Ga0316576_10335692
196 Ga0316578_10000911
197 Ga0316578_10015475
198 Ga0316577_10014622
199 Ga0316577_10021789
200 Ga0316577_10048924
201 Ga0307412_10135976
202 Ga0307412_10237410
203 Ga0316583_10000433
204 Ga0316583_10002728
205 Ga0316583_10041116
206 Ga0316583_10056598
207 Ga0316583_10081457
208 Ga0316585_10068242
209 Ga0316580_10004851
210 Ga0316593_10001742
211 Ga0316593_10015227
212 Ga0316593_10042792
213 Ga0316592_1006480
214 Ga0316574_0004631
215 Ga0316574_0025431
216 Ga0316574_0054136
217 Ga0316574_0063057
218 Ga0316574_0081194
219 Ga0316574_0144825
220 Ga0316582_0003666
221 Ga0316582_0010701
222 Ga0316582_0011156
223 Ga0316582_0016877
224 Ga0316582_0065630
225 Ga0316582_0113498
226 Ga0316582_0117628
227 Ga0316582_0161864
228 Ga0316582_0165716
229 Ga0316584_0021342
230 Ga0316584_0055389
231 Ga0316584_0060395
232 Ga0316584_0092074
233 Ga0316584_0131974
234 Ga0316584_0148331
235 Ga0316581_0000621
236 Ga0316581_0000772
237 Ga0316581_0001157
238 Ga0400484_03662
239 Ga0400484_31412
240 Ga0400490_32195
241 Ga0400490_39947
242 Ga0400490_54564
243 Ga0400490_59274
244 Ga0400485_11431
245 Ga0400488_24661
246 Ga0400488_41941
247 Ga0400488_45265
248 Ga0400488_46588
249 Ga0400488_55282
250 Ga0400488_60847
251 Ga0400486_00384
252 Ga0400486_13165
253 Ga0400486_18012
254 Ga0400486_20525
255 Ga0400483_063369
256 Ga0400483_069614
257 Ga0400483_141821
258 Ga0400483_151395
259 Ga0400483_203343
260 Ga0400483_272706
261 Ga0400483_272961
262 Ga0400487_11695
263 Ga0400487_15109
264 Ga0400487_37718
265 Ga0400487_41095
266 Ga0400487_51418
267 Ga0451577_0079614
268 Ga0453684_0003473
269 Ga0453684_0003951
270 Ga0453684_0004710
271 Ga0453684_0012170
272 Ga0501032_0002508
273 Ga0501034_0051189
274 Ga0501037_0028917
275 Ga0501038_0000828
276 Ga0501038_0227616
277 Ga0501039_0060038
278 Ga0501046_0003317
279 Ga0501070_0051538
280 Ga0501074_0069702
281 Ga0501075_0379366
282 Ga0501076_0087136
283 Ga0501080_0038217
284 Ga0501035_0047152
285 Ga0501035_0328430
286 nmdc:mga0k408_232712_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13419

HAD_2

Haloacid dehalogenase-like hydrolase

40

235

0.88

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

37

229

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4uav-assembly1.cif.gz_A crystal structure of cbby (at3g48420) from arabidobsis thaliana 0.97 2 240
4uav-assembly1.cif.gz_A crystal structure of cbby (at3g48420) from arabidobsis thaliana 0.9621 2 240
2wm8-assembly1.cif.gz_A crystal structure of human magnesium-dependent phosphatase 1 of the haloacid dehalogenase superfamily (mgc5987) 0.8614 95 200
7ocn-assembly1.cif.gz_A crystal structure of the bifunctional mannitol-1-phosphate dehydrogenase/phosphatase mtld from acinetobacter baumannii 0.8492 1 235
7ocq-assembly1.cif.gz_A nadh bound to the dehydrogenase domain of the bifunctional mannitol-1-phosphate dehydrogenase/phosphatase mtld from acinetobacter baumannii 0.8487 1 235
ID Description Score Start End Superfamily
af_I1K4I3_171_289_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9819 98 215 3.40.50.1000
4uavA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9748 2 240 3.40.50.1000
af_I1K4I3_171_289_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9658 98 215 3.40.50.1000
af_Q6ZDS0_185_318_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9648 98 235 3.40.50.1000
4uatA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9605 97 217 3.40.50.1000
ID Description Score Start End GO Terms
AF-A0A3D3UMU0-F1-model_v4 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 0.9895 1 238 GO:0016746
GO:0016787
AF-A0A2K1JXE2-F1-model_v4 Uncharacterized protein 0.9886 2 235 GO:0016787
AF-A9TJI7-F1-model_v4 deleted 0.988 2 235
AF-A0A3N5LK97-F1-model_v4 HAD family hydrolase 0.9847 2 238 GO:0016746
GO:0016787
AF-A0A3A4NQ24-F1-model_v4 HAD family hydrolase 0.9822 1 235 GO:0016787

Map