F189142

General Info

Members Datasets Scaffolds Average Seq Length
143 65 143 823

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10010456|Ga0265338_100104567
Length 919
Sequence MKPDTDPPKVPEPASASVPDTLASLKVNPDTGLARADVDTRRKENGYNEVAEKKGHPVIKFLKKFWGISAWMLELIMVLSAVLGKYSDLIVVGALLVINAVLSFMQESRAAGVVAALRKRLQVNARVRRDSSWQEIPARELVPGDIVRVRPGDIIPADVKLLTGALSIDQSALTGESKDADKKPGEVLSSGSIVRRGEGNGVVMLTGAKTYFGRTTQLVQEARPKLHIEAVVAKVVRWLFVIVGALLCMVVVLSLIRGSPLLEMVSLMLVLLMSAVPVALPVMFTVSMAVGSKELAKRGVLVTRLSAAEDAATMDVLCVDKTGTITMNQLAVTGVIPLEHATEADVLFAGALASQEANQDPIDHAFLTAAKDRHVFDNLPKVTPVSFAPFDAKNRRTEAVVEQNGQRLRVMKGAVRTIAEACGFQPPAIEALEARVSAAAGKGYRTLAVGRGAETGALTLVGLVSLYDPPRPDAKQLIATLHDLGVPVKMLTGDALPVACEIGRGVGLPNIRHMADLKAGNQTVDLFAGADGFAEVFPEDKYTVVKHLQAAGHVTGMTGDGVNDAPALRQAEVGIAVSTATDVAKGAASVVLTEAGLTNIVALVEQGRTIYQRILTWIINKISRTILKAAFVAIAFVVTGKFVVSAFAMLLLVFMTDFAKISLATDNVRPSKKPETWNIGGFITVSVVLGVAMVAETLLLLWIGWTHFGLATNNNALYTFSFLMLLYFAVFSVVSARERHWFWATLPSKTFLGALTADALAGTVLTRVGLPGLMPLPWSQTLAIFAYAMVSCLIVNDAVKVAMIKWRVLNAVARKPEVKAEPIEALTPQIAARAYELYERQGHQDGQSVQNWDKAEQEIRKNQDRTEPKPETKPAASGVSPQLVERVHKFYEELGREDVRAVQELEEAEQKLPEADTKK

Samples

Sample ID Description Type Environment
1 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
2 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
3 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
4 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
5 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
6 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
7 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
8 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
9 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
10 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
11 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
12 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
14 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
16 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
18 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
19 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
20 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
21 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
22 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
23 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
24 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
25 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
26 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
27 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
28 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
29 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
30 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
31 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
32 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
33 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
34 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
35 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
36 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
37 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
38 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
39 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
40 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
41 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
42 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
43 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
44 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
45 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
46 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
47 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
48 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
49 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
50 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
51 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
52 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
53 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
54 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
55 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
56 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
57 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
58 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
59 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
60 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
61 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
62 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
63 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
64 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
65 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.6
Stem 0
Stem Tuber 0
Unclassified 1.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070675_100001727 3300005354 Bacteria 16134
2 Ga0070714_100000638 3300005435 Bacteria 24952
3 Ga0070663_100015348 3300005455 Unclassified 4942
4 Ga0070672_100033823 3300005543 Bacteria 3874
5 Ga0068855_100001858 3300005563 Bacteria 26263
6 Ga0068863_100000928 3300005841 Bacteria 29427
7 Ga0068860_100000387 3300005843 Bacteria 57752
8 Ga0105242_10001477 3300009176 Bacteria 18509
9 Ga0163163_10001700 3300014325 Bacteria 18599
10 Ga0157380_10015711 3300014326 Bacteria 5566
11 Ga0207671_10007099 3300025914 Bacteria 9792
12 Ga0207664_10010706 3300025929 Bacteria 6485
13 Ga0207686_10006107 3300025934 Bacteria 6471
14 Ga0207678_10052331 3300026067 Bacteria 3523
15 Ga0207641_10000567 3300026088 Bacteria 41304
16 Ga0268264_10000335 3300028381 Bacteria 72734
17 Ga0265337_1000308 3300028556 Bacteria 25957
18 Ga0265337_1001787 3300028556 Bacteria 10364
19 Ga0265319_1000131 3300028563 Bacteria 55815
20 Ga0265319_1000137 3300028563 Bacteria 54672
21 Ga0265319_1004958 3300028563 Bacteria 6487
22 Ga0265334_10001368 3300028573 Bacteria 11767
23 Ga0265334_10001605 3300028573 Bacteria 10863
24 Ga0265334_10001642 3300028573 Bacteria 10727
25 Ga0265318_10001909 3300028577 Bacteria 11683
26 Ga0265318_10008467 3300028577 Bacteria 4577
27 Ga0265318_10015634 3300028577 Unclassified 3151
28 Ga0265323_10001416 3300028653 Bacteria 11808
29 Ga0265323_10002285 3300028653 Bacteria 8890
30 Ga0265323_10004147 3300028653 Bacteria 6279
31 Ga0265323_10010887 3300028653 Bacteria 3682
32 Ga0265322_10000985 3300028654 Bacteria 9896
33 Ga0265322_10003358 3300028654 Bacteria 4846
34 Ga0265336_10000253 3300028666 Bacteria 37997
35 Ga0265336_10001126 3300028666 Bacteria 12830
36 Ga0265336_10005370 3300028666 Bacteria 4735
37 Ga0265338_10000618 3300028800 Bacteria 62009
38 Ga0265338_10001202 3300028800 Bacteria 42812
39 Ga0265338_10002720 3300028800 Bacteria 25943
40 Ga0265338_10007107 3300028800 Bacteria 14026
41 Ga0265338_10007242 3300028800 Bacteria 13848
42 Ga0265338_10008990 3300028800 Bacteria 12015
43 Ga0265338_10010285 3300028800 Bacteria 11005
44 Ga0265338_10010456 3300028800 Bacteria 10875
45 Ga0265338_10013931 3300028800 Bacteria 9021
46 Ga0265338_10024648 3300028800 Bacteria 6139
47 Ga0265338_10025914 3300028800 Bacteria 5929
48 Ga0265324_10000021 3300029957 Bacteria 170598
49 Ga0265324_10000161 3300029957 Bacteria 51958
50 Ga0265324_10000524 3300029957 Bacteria 26329
51 Ga0265324_10000766 3300029957 Bacteria 21156
52 Ga0265324_10002282 3300029957 Bacteria 9981
53 Ga0265330_10000006 3300031235 Bacteria 215296
54 Ga0265330_10000481 3300031235 Bacteria 26727
55 Ga0265330_10004297 3300031235 Bacteria 7253
56 Ga0265330_10011833 3300031235 Bacteria 4087
57 Ga0265332_10000471 3300031238 Bacteria 27828
58 Ga0265332_10001502 3300031238 Bacteria 12971
59 Ga0265332_10001696 3300031238 Bacteria 12016
60 Ga0265332_10007905 3300031238 Bacteria 4793
61 Ga0265332_10014564 3300031238 Unclassified 3479
62 Ga0265328_10004459 3300031239 Bacteria 6083
63 Ga0265320_10001191 3300031240 Bacteria 19131
64 Ga0265320_10002020 3300031240 Bacteria 14322
65 Ga0265320_10003041 3300031240 Bacteria 11385
66 Ga0265320_10008963 3300031240 Bacteria 6074
67 Ga0265325_10000525 3300031241 Bacteria 27638
68 Ga0265325_10014750 3300031241 Bacteria 4409
69 Ga0265340_10000743 3300031247 Bacteria 18508
70 Ga0265340_10000898 3300031247 Bacteria 16865
71 Ga0265340_10001652 3300031247 Bacteria 12818
72 Ga0265340_10003208 3300031247 Bacteria 9279
73 Ga0265339_10000190 3300031249 Bacteria 51604
74 Ga0265339_10001245 3300031249 Bacteria 19159
75 Ga0265339_10004715 3300031249 Bacteria 9247
76 Ga0265339_10019188 3300031249 Bacteria 4016
77 Ga0265339_10036181 3300031249 Bacteria 2765
78 Ga0265339_10037542 3300031249 Bacteria 2707
79 Ga0265339_10037649 3300031249 Bacteria 2703
80 Ga0265331_10000502 3300031250 Bacteria 36921
81 Ga0265331_10002349 3300031250 Bacteria 12860
82 Ga0265331_10011177 3300031250 Bacteria 4925
83 Ga0265331_10014205 3300031250 Bacteria 4250
84 Ga0265327_10000091 3300031251 Bacteria 196369
85 Ga0265327_10000335 3300031251 Bacteria 89427
86 Ga0265327_10007561 3300031251 Bacteria 8351
87 Ga0265327_10024786 3300031251 Bacteria 3513
88 Ga0265327_10026259 3300031251 Bacteria 3377
89 Ga0265316_10000622 3300031344 Bacteria 39508
90 Ga0265316_10002738 3300031344 Bacteria 18078
91 Ga0265316_10005070 3300031344 Bacteria 12924
92 Ga0265316_10005727 3300031344 Bacteria 11997
93 Ga0265316_10007036 3300031344 Bacteria 10658
94 Ga0265316_10008779 3300031344 Bacteria 9342
95 Ga0265316_10040921 3300031344 Unclassified 3713
96 Ga0265313_10001208 3300031595 Bacteria 24677
97 Ga0265313_10001219 3300031595 Bacteria 24542
98 Ga0265313_10026051 3300031595 Unclassified 3088
99 Ga0265314_10000019 3300031711 Bacteria 326248
100 Ga0265314_10000497 3300031711 Bacteria 50783
101 Ga0265314_10000682 3300031711 Bacteria 41307
102 Ga0265314_10001701 3300031711 Bacteria 23896
103 Ga0265314_10003382 3300031711 Bacteria 15463
104 Ga0265314_10004802 3300031711 Bacteria 12369
105 Ga0265314_10048376 3300031711 Bacteria 2985
106 Ga0265314_10058304 3300031711 Bacteria 2646
107 Ga0265342_10000062 3300031712 Bacteria 115166
108 Ga0265342_10001204 3300031712 Bacteria 24521
109 Ga0265342_10001618 3300031712 Bacteria 20784
110 Ga0265342_10002433 3300031712 Bacteria 16092
111 Ga0265342_10004721 3300031712 Bacteria 10609
112 Ga0265342_10014325 3300031712 Bacteria 5268
113 Ga0316577_10009432 3300031733 Bacteria 5251
114 Ga0373939_0005173 3300035114 Bacteria 3101
115 Ga0373954_0003551 3300035118 Bacteria 6628
116 Ga0373924_0016828 3300035410 Bacteria 2797
117 Ga0373927_0017769 3300035695 Bacteria 4679
118 Ga0373937_0017851 3300036401 Bacteria 6331
119 Ga0451577_0000121 3300042876 Bacteria 172135
120 Ga0453684_0000227 3300044712 Bacteria 244655
121 Ga0453684_0064498 3300044712 Bacteria 4679
122 Ga0495592_0026005 3300046454 Bacteria 4440
123 Ga0495653_0011264 3300046463 Bacteria 7309
124 Ga0495580_0050595 3300046472 Bacteria 2938
125 Ga0495628_0032584 3300046516 Bacteria 4206
126 Ga0495652_0002077 3300046529 Bacteria 21156
127 Ga0495587_0000962 3300046536 Bacteria 18881
128 Ga0495587_0001606 3300046536 Bacteria 15036
129 Ga0495599_0010147 3300046678 Bacteria 5769
130 Ga0495658_0031440 3300046683 Bacteria 2892
131 Ga0495600_0016582 3300046809 Bacteria 4678
132 Ga0495600_0030010 3300046809 Bacteria 3522
133 Ga0495604_0000617 3300047317 Bacteria 30546
134 Ga0495674_0005014 3300047319 Bacteria 12737
135 Ga0495680_0004653 3300047322 Bacteria 13066
136 Ga0495675_0000013 3300047444 Bacteria 139190
137 Ga0495675_0001443 3300047444 Bacteria 14377
138 Ga0495684_0016078 3300047471 Bacteria 5760
139 Ga0495602_0010356 3300048088 Bacteria 9679
140 Ga0496119_0003412 3300048922 Bacteria 16506
141 Ga0496120_0012710 3300048923 Bacteria 5710
142 Ga0501034_0037578 3300049571 Bacteria 4903
143 Ga0495619_0006381 3300053085 Bacteria 7475

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009176 Ga0105242_10001477 Ga0105242_100014773 723
2 3300035114 Ga0373939_0005173 Ga0373939_0005173_763_3030 730
3 3300035118 Ga0373954_0003551 Ga0373954_0003551_2907_5150 747
4 3300035410 Ga0373924_0016828 Ga0373924_0016828_137_2380 747
5 3300035695 Ga0373927_0017769 Ga0373927_0017769_810_3053 747
6 3300036401 Ga0373937_0017851 Ga0373937_0017851_1436_3679 747
7 3300046683 Ga0495658_0031440 Ga0495658_0031440_92_2335 747
8 3300044712 Ga0453684_0064498 Ga0453684_0064498_2101_4593 761
9 3300042876 Ga0451577_0000121 Ga0451577_0000121_112701_115169 762
10 3300044712 Ga0453684_0000227 Ga0453684_0000227_153686_156154 762
11 3300031344 Ga0265316_10002738 Ga0265316_1000273814 763
12 3300005543 Ga0070672_100033823 Ga0070672_1000338232 768
13 3300031241 Ga0265325_10014750 Ga0265325_100147502 771
14 3300028556 Ga0265337_1001787 Ga0265337_10017874 775
15 3300028573 Ga0265334_10001642 Ga0265334_100016427 775
16 3300046678 Ga0495599_0010147 Ga0495599_0010147_2260_4752 775
17 3300031344 Ga0265316_10008779 Ga0265316_100087796 776
18 3300031712 Ga0265342_10002433 Ga0265342_100024339 776
19 3300014325 Ga0163163_10001700 Ga0163163_100017008 778
20 3300046809 Ga0495600_0030010 Ga0495600_0030010_459_2867 778
21 3300047322 Ga0495680_0004653 Ga0495680_0004653_9660_12068 778
22 3300031238 Ga0265332_10001502 Ga0265332_100015028 779
23 3300049571 Ga0501034_0037578 Ga0501034_0037578_61_2508 781
24 3300031240 Ga0265320_10001191 Ga0265320_1000119115 782
25 3300031249 Ga0265339_10036181 Ga0265339_100361812 782
26 3300031711 Ga0265314_10003382 Ga0265314_100033826 782
27 3300031235 Ga0265330_10004297 Ga0265330_100042977 783
28 3300028563 Ga0265319_1000137 Ga0265319_100013733 784
29 3300028577 Ga0265318_10001909 Ga0265318_100019095 784
30 3300031240 Ga0265320_10008963 Ga0265320_100089633 784
31 3300031711 Ga0265314_10004802 Ga0265314_100048022 784
32 3300031251 Ga0265327_10024786 Ga0265327_100247862 785
33 3300031733 Ga0316577_10009432 Ga0316577_100094322 786
34 3300028800 Ga0265338_10024648 Ga0265338_100246483 787
35 3300025934 Ga0207686_10006107 Ga0207686_100061073 788
36 3300031251 Ga0265327_10000335 Ga0265327_1000033563 788
37 3300031711 Ga0265314_10000682 Ga0265314_1000068215 790
38 3300028800 Ga0265338_10013931 Ga0265338_100139311 791
39 3300031595 Ga0265313_10026051 Ga0265313_100260512 791
40 3300046536 Ga0495587_0001606 Ga0495587_0001606_9929_12409 792
41 3300047444 Ga0495675_0001443 Ga0495675_0001443_8465_10981 792
42 3300048088 Ga0495602_0010356 Ga0495602_0010356_5430_7910 792
43 3300031251 Ga0265327_10007561 Ga0265327_100075613 793
44 3300031711 Ga0265314_10058304 Ga0265314_100583042 793
45 3300031344 Ga0265316_10005070 Ga0265316_100050709 794
46 3300048922 Ga0496119_0003412 Ga0496119_0003412_9136_11700 795
47 3300048923 Ga0496120_0012710 Ga0496120_0012710_2226_4790 795
48 3300031249 Ga0265339_10037649 Ga0265339_100376491 796
49 3300028573 Ga0265334_10001605 Ga0265334_100016059 799
50 3300031344 Ga0265316_10040921 Ga0265316_100409211 799
51 3300028666 Ga0265336_10005370 Ga0265336_100053704 800
52 3300028800 Ga0265338_10007107 Ga0265338_100071078 801
53 3300005435 Ga0070714_100000638 Ga0070714_10000063812 802
54 3300025929 Ga0207664_10010706 Ga0207664_100107064 802
55 3300028563 Ga0265319_1004958 Ga0265319_10049583 804
56 3300028577 Ga0265318_10008467 Ga0265318_100084672 804
57 3300028653 Ga0265323_10001416 Ga0265323_1000141613 804
58 3300028654 Ga0265322_10000985 Ga0265322_100009855 804
59 3300028800 Ga0265338_10008990 Ga0265338_100089906 804
60 3300029957 Ga0265324_10000524 Ga0265324_100005244 804
61 3300031235 Ga0265330_10000481 Ga0265330_1000048115 804
62 3300031238 Ga0265332_10001696 Ga0265332_100016965 804
63 3300031239 Ga0265328_10004459 Ga0265328_100044595 804
64 3300031240 Ga0265320_10003041 Ga0265320_100030415 804
65 3300031247 Ga0265340_10003208 Ga0265340_100032086 804
66 3300031249 Ga0265339_10001245 Ga0265339_1000124512 804
67 3300031250 Ga0265331_10002349 Ga0265331_100023493 804
68 3300031344 Ga0265316_10007036 Ga0265316_100070369 804
69 3300031711 Ga0265314_10000497 Ga0265314_100004976 804
70 3300031712 Ga0265342_10001204 Ga0265342_1000120415 804
71 3300028800 Ga0265338_10002720 Ga0265338_1000272013 805
72 3300028800 Ga0265338_10025914 Ga0265338_100259143 805
73 3300031249 Ga0265339_10019188 Ga0265339_100191883 805
74 3300031235 Ga0265330_10011833 Ga0265330_100118333 806
75 3300031712 Ga0265342_10014325 Ga0265342_100143253 806
76 3300005455 Ga0070663_100015348 Ga0070663_1000153483 807
77 3300005841 Ga0068863_100000928 Ga0068863_10000092810 807
78 3300005843 Ga0068860_100000387 Ga0068860_10000038751 807
79 3300025914 Ga0207671_10007099 Ga0207671_100070997 807
80 3300026067 Ga0207678_10052331 Ga0207678_100523311 807
81 3300026088 Ga0207641_10000567 Ga0207641_100005673 807
82 3300028381 Ga0268264_10000335 Ga0268264_1000033513 807
83 3300028653 Ga0265323_10004147 Ga0265323_100041472 807
84 3300028653 Ga0265323_10010887 Ga0265323_100108873 807
85 3300028654 Ga0265322_10003358 Ga0265322_100033582 807
86 3300029957 Ga0265324_10000161 Ga0265324_1000016115 807
87 3300029957 Ga0265324_10002282 Ga0265324_100022825 807
88 3300031238 Ga0265332_10007905 Ga0265332_100079053 807
89 3300031247 Ga0265340_10001652 Ga0265340_100016528 807
90 3300031251 Ga0265327_10000091 Ga0265327_10000091135 807
91 3300046454 Ga0495592_0026005 Ga0495592_0026005_1544_4036 807
92 3300046472 Ga0495580_0050595 Ga0495580_0050595_20_2500 807
93 3300053085 Ga0495619_0006381 Ga0495619_0006381_755_3259 807
94 3300028666 Ga0265336_10001126 Ga0265336_100011265 809
95 3300029957 Ga0265324_10000021 Ga0265324_10000021109 809
96 3300031711 Ga0265314_10048376 Ga0265314_100483761 809
97 3300028556 Ga0265337_1000308 Ga0265337_10003086 810
98 3300028563 Ga0265319_1000131 Ga0265319_100013138 810
99 3300028573 Ga0265334_10001368 Ga0265334_100013689 810
100 3300028577 Ga0265318_10015634 Ga0265318_100156341 810
101 3300028666 Ga0265336_10000253 Ga0265336_1000025327 810
102 3300028800 Ga0265338_10000618 Ga0265338_1000061836 810
103 3300028800 Ga0265338_10001202 Ga0265338_1000120233 810
104 3300031235 Ga0265330_10000006 Ga0265330_10000006177 810
105 3300031238 Ga0265332_10000471 Ga0265332_1000047116 810
106 3300031238 Ga0265332_10014564 Ga0265332_100145641 810
107 3300031240 Ga0265320_10002020 Ga0265320_100020203 810
108 3300031247 Ga0265340_10000898 Ga0265340_100008985 810
109 3300031249 Ga0265339_10037542 Ga0265339_100375421 810
110 3300031250 Ga0265331_10011177 Ga0265331_100111772 810
111 3300031250 Ga0265331_10014205 Ga0265331_100142052 810
112 3300031344 Ga0265316_10000622 Ga0265316_1000062227 810
113 3300031595 Ga0265313_10001219 Ga0265313_1000121915 810
114 3300031711 Ga0265314_10000019 Ga0265314_100000197 810
115 3300031712 Ga0265342_10000062 Ga0265342_1000006286 810
116 3300031712 Ga0265342_10001618 Ga0265342_1000161813 810
117 3300028653 Ga0265323_10002285 Ga0265323_100022852 814
118 3300028800 Ga0265338_10010285 Ga0265338_100102852 814
119 3300031241 Ga0265325_10000525 Ga0265325_1000052518 814
120 3300031249 Ga0265339_10004715 Ga0265339_100047157 814
121 3300031250 Ga0265331_10000502 Ga0265331_1000050228 814
122 3300031595 Ga0265313_10001208 Ga0265313_1000120811 814
123 3300031711 Ga0265314_10001701 Ga0265314_1000170114 814
124 3300031712 Ga0265342_10004721 Ga0265342_100047211 814
125 3300005563 Ga0068855_100001858 Ga0068855_1000018585 816
126 3300046463 Ga0495653_0011264 Ga0495653_0011264_4769_7294 816
127 3300046516 Ga0495628_0032584 Ga0495628_0032584_376_2901 816
128 3300046529 Ga0495652_0002077 Ga0495652_0002077_12368_14893 816
129 3300046536 Ga0495587_0000962 Ga0495587_0000962_12755_15280 816
130 3300046809 Ga0495600_0016582 Ga0495600_0016582_1878_4403 816
131 3300047317 Ga0495604_0000617 Ga0495604_0000617_9849_12374 816
132 3300047319 Ga0495674_0005014 Ga0495674_0005014_9518_12043 816
133 3300047444 Ga0495675_0000013 Ga0495675_0000013_97676_100201 816
134 3300047471 Ga0495684_0016078 Ga0495684_0016078_428_2953 816
135 3300031247 Ga0265340_10000743 Ga0265340_100007438 817
136 3300028800 Ga0265338_10007242 Ga0265338_100072424 818
137 3300031344 Ga0265316_10005727 Ga0265316_100057272 818
138 3300031251 Ga0265327_10026259 Ga0265327_100262592 821
139 3300028800 Ga0265338_10010456 Ga0265338_100104567 822
140 3300029957 Ga0265324_10000766 Ga0265324_100007664 824
141 3300031249 Ga0265339_10000190 Ga0265339_1000019050 824
142 3300005354 Ga0070675_100001727 Ga0070675_10000172712 827
143 3300014326 Ga0157380_10015711 Ga0157380_100157114 827

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00122

E1-E2_ATPase

E1-E2 ATPase

119

298

0.98

PF11154

DUF2934

Protein of unknown function (DUF2934)

825

861

0.94

PF00690

Cation_ATPase_N

Cation transporter/ATPase, N-terminus

13

80

0.89

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

314

572

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yj5-assembly1.cif.gz_A conformational changes in the catalytic domain of the cpx-atpase copb- b upon nucleotide binding 0.7748 274 591
1wr8-assembly1.cif.gz_A crystal structure of hypothetical protein ph1421 from pyrococcus horikoshii. 0.7605 452 489
2yj5-assembly1.cif.gz_A conformational changes in the catalytic domain of the cpx-atpase copb- b upon nucleotide binding 0.7556 274 591
2yj4-assembly1.cif.gz_A conformational changes in the catalytic domain of the cpx-atpase copb- b upon nucleotide binding 0.7435 274 591
8iww-assembly1.cif.gz_A hspca1 in the cae1p-adp state 0.7403 1 787
ID Description Score Start End Superfamily
af_Q58623_597_793_1.20.1110.10 Mainly Alpha;Up-down Bundle;Calcium-transporting ATPase, transmembrane domain;Calcium-transporting ATPase, transmembrane domain 0.9497 587 784 1.20.1110.10
af_Q58623_597_793_1.20.1110.10 Mainly Alpha;Up-down Bundle;Calcium-transporting ATPase, transmembrane domain;Calcium-transporting ATPase, transmembrane domain 0.9357 587 784 1.20.1110.10
af_Q58623_328_456_3.40.1110.10 Alpha Beta;3-Layer(aba) Sandwich;Calcium-transporting ATPase, cytoplasmic domain N;Calcium-transporting ATPase, cytoplasmic domain N 0.9316 320 449 3.40.1110.10
5ksdA01 Mainly Alpha;Up-down Bundle;Calcium-transporting ATPase, transmembrane domain;Calcium-transporting ATPase, transmembrane domain 0.9203 583 792 1.20.1110.10
af_Q58623_328_456_3.40.1110.10 Alpha Beta;3-Layer(aba) Sandwich;Calcium-transporting ATPase, cytoplasmic domain N;Calcium-transporting ATPase, cytoplasmic domain N 0.9178 320 449 3.40.1110.10
ID Description Score Start End GO Terms
AF-A0A7J3XZ81-F1-model_v4 Plasma-membrane proton-efflux P-type ATPase 0.8763 20 154 GO:0016020
AF-A0A7L4Q940-F1-model_v4 deleted 0.855 14 154
AF-X8F7X4-F1-model_v4 deleted 0.8529 583 820
AF-A0A257STS5-F1-model_v4 Plasma-membrane proton-efflux P-type ATPase 0.8513 19 793 GO:0005524
GO:0008553
GO:0016020
GO:0016887
GO:0120029
AF-A0A446CB00-F1-model_v4 Magnesium-transporting ATPase, P-type 1 (EC 3.6.3.2) 0.8487 594 792 GO:0005886
GO:0015444
GO:0016787

Feature Viewer

pLDDT pTM Quality
71.51 0.65 Medium
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Predicted Structure (AlphaFold2)

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