F188721

General Info

Members Datasets Scaffolds Average Seq Length
143 117 103 362

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10007629|Ga0157370_100076296
Length 379
Sequence MINFLDLKTINLQYKEGLLEAFENVLDSGWFILGDQVKKFEKEFADFCGVKNCLGVANGLDALILILEGYKQLGFMKDGDEVILPSNTYIASILAVSKAGLKPVLVEPDINTYLIDENLIEEKITSKTKAILPVHLYGRLCNMNAINIIAKKHGLKVIEDSAQSHGASLDRIKCGNLGDAAGFSFYPGKNLGALGDGGAVTTNDNKLAEIIRAYRNYGSHKKYENLYLGINSRLDEIQAAFLSLKLKRLNSDNVERRKIAQYYVDNINNDLITLPCSKKTNIMDFESHVWHVFAVRVQNRRKFDKYLSDNGIQTVIHYPVPPHKQPAYSAWNKDSYPISEKIHEQVISLPISPVMNDNEYKQVVEVINRFSVSPIVKGL

Samples

Sample ID Description Type Environment
1 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
2 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
3 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
4 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
5 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
6 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
7 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
8 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
9 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
10 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
11 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
12 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
13 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
14 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
15 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
16 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
17 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
18 2791355010 Kosakonia pseudosacchari NN143 Isolate Unclassified
19 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
20 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
21 2844665904 Pseudomonas protegens H1F10C Isolate Unclassified
22 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
23 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
24 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
25 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
26 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
27 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
28 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
29 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
30 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
31 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
32 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
33 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
34 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
35 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
36 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
37 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
38 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
39 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
40 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
41 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
42 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
43 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
44 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
45 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
46 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
47 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
48 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
49 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
50 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
51 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
52 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
53 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
54 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
55 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
56 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
59 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
70 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
71 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
73 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
74 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
89 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
90 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
99 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
100 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
101 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
102 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
103 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
104 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
105 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
108 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
109 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
110 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
111 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
112 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
113 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
114 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
115 3300049681 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_B_3_drought Metagenome Rhizosphere
116 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
117 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.03
Metatranscriptomes 0
Isolates 27.97

Biome Distribution

Category Percentage (%)
Aerial Root 1.4
Bulb 0
Endosphere 9.09
Nodule 0.7
Rhizoplane 1.4
Rhizosphere 67.83
Stem 0
Stem Tuber 0.7
Unclassified 18.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000053 3300001915 Bacteria 28323
2 JGI25152J39213_1000253 3300002773 Bacteria 35641
3 JGI25150J39212_1000186 3300002774 Bacteria 35005
4 JGI25151J46595_10000543 3300003187 Bacteria 34834
5 JGI25153J46596_10000323 3300003215 Bacteria 34832
6 Ga0055538_1000175 3300003751 Bacteria 41309
7 Ga0058692_1007375 3300003856 Bacteria 2923
8 Ga0070658_10006614 3300005327 Bacteria 9395
9 Ga0070683_100211114 3300005329 Bacteria 1844
10 Ga0070680_100001637 3300005336 Bacteria 16366
11 Ga0070682_100001572 3300005337 Bacteria 12750
12 Ga0070668_100019909 3300005347 Bacteria 5057
13 Ga0070659_100231448 3300005366 Bacteria 1527
14 Ga0070663_100002334 3300005455 Bacteria 10659
15 Ga0070681_10042720 3300005458 Bacteria 4541
16 Ga0070679_100006816 3300005530 Bacteria 10653
17 Ga0068855_100025158 3300005563 Bacteria 7127
18 Ga0068856_100010809 3300005614 Bacteria 8866
19 Ga0075366_10002723 3300006195 Bacteria 9131
20 Ga0105244_10007013 3300009036 Bacteria 7211
21 Ga0105250_10006627 3300009092 Bacteria 5041
22 Ga0105243_10011831 3300009148 Bacteria 6600
23 Ga0105243_10131378 3300009148 Bacteria 2124
24 Ga0105249_10006119 3300009553 Bacteria 10439
25 Ga0157373_10001865 3300013100 Bacteria 15974
26 Ga0157371_10010711 3300013102 Bacteria 7120
27 Ga0157371_10013179 3300013102 Bacteria 6291
28 Ga0157371_10023078 3300013102 Bacteria 4550
29 Ga0157370_10001124 3300013104 Bacteria 33422
30 Ga0157370_10001978 3300013104 Bacteria 25174
31 Ga0157370_10002801 3300013104 Bacteria 20814
32 Ga0157370_10007629 3300013104 Bacteria 11747
33 Ga0157370_10074370 3300013104 Bacteria 3205
34 Ga0157369_10000939 3300013105 Bacteria 37034
35 Ga0157369_10013322 3300013105 Bacteria 9299
36 Ga0163162_10003180 3300013306 Bacteria 15704
37 Ga0157372_10002279 3300013307 Bacteria 20788
38 Ga0157372_10035427 3300013307 Bacteria 5495
39 Ga0157372_10076649 3300013307 Bacteria 3775
40 Ga0157375_10480829 3300013308 Bacteria 1407
41 Ga0182008_10000003 3300014497 Bacteria 456880
42 Ga0182006_1000001 3300015261 Bacteria 1091090
43 Ga0209784_100051 3300025224 Bacteria 183666
44 Ga0207425_1000051 3300025245 Bacteria 166795
45 Ga0209129_1000395 3300025258 Bacteria 34881
46 Ga0209675_1005122 3300025291 Bacteria 5580
47 Ga0209025_1000160 3300025294 Bacteria 166795
48 Ga0209758_1000147 3300025297 Bacteria 166795
49 Ga0207647_10065396 3300025904 Bacteria 2208
50 Ga0207705_10024639 3300025909 Bacteria 4293
51 Ga0207707_10189121 3300025912 Bacteria 1796
52 Ga0207660_10040341 3300025917 Bacteria 3268
53 Ga0207652_10000203 3300025921 Bacteria 62871
54 Ga0207690_10207267 3300025932 Bacteria 1493
55 Ga0207709_10083600 3300025935 Bacteria 2064
56 Ga0207667_10020730 3300025949 Bacteria 7303
57 Ga0207668_10013244 3300025972 Bacteria 5072
58 Ga0207678_10001948 3300026067 Bacteria 18829
59 Ga0207702_10128179 3300026078 Bacteria 2281
60 Ga0209371_1004478 3300027312 Bacteria 6042
61 Ga0268256_1003839 3300030500 Bacteria 6549
62 Ga0307412_10000027 3300031911 Bacteria 214663
63 Ga0307416_100000006 3300032002 Bacteria 466074
64 Ga0307414_10000011 3300032004 Bacteria 338253
65 Ga0307414_10105634 3300032004 Bacteria 2129
66 Ga0395899_0004336 3300037312 Bacteria 11078
67 Ga0395899_0157661 3300037312 Bacteria 1605
68 Ga0395900_0020802 3300037418 Bacteria 6706
69 Ga0395900_0028485 3300037418 Bacteria 5722
70 Ga0395898_0008950 3300037466 Bacteria 10540
71 Ga0395898_0020134 3300037466 Bacteria 6777
72 Ga0395905_0063914 3300037471 Bacteria 3444
73 Ga0395901_0015290 3300038443 Bacteria 7809
74 Ga0395901_0094698 3300038443 Bacteria 3129
75 Ga0439445_0003789 3300042004 Bacteria 3397
76 Ga0466964_0096197 3300044706 Unclassified 1297
77 Ga0495650_0000003 3300046471 Bacteria 900730
78 Ga0495610_0000005 3300046512 Bacteria 924111
79 Ga0495668_0000097 3300046616 Bacteria 139246
80 Ga0495625_0000005 3300046660 Bacteria 596135
81 Ga0495661_0010722 3300046665 Bacteria 6243
82 Ga0495661_0040840 3300046665 Bacteria 2874
83 Ga0495649_0000003 3300046694 Bacteria 880817
84 Ga0496102_0008027 3300048905 Bacteria 9024
85 Ga0496116_0000695 3300048919 Bacteria 43598
86 Ga0496117_0000007 3300048920 Bacteria 720505
87 Ga0496117_0015526 3300048920 Bacteria 6486
88 Ga0496118_0000104 3300048921 Bacteria 157435
89 Ga0496119_0000007 3300048922 Bacteria 475920
90 Ga0496122_0000222 3300048925 Bacteria 126693
91 Ga0496122_0000665 3300048925 Bacteria 69182
92 Ga0496122_0000724 3300048925 Bacteria 64522
93 Ga0496122_0003160 3300048925 Bacteria 22018
94 Ga0496122_0008156 3300048925 Bacteria 11401
95 Ga0496122_0055346 3300048925 Bacteria 2969
96 Ga0496123_0000592 3300048926 Bacteria 61754
97 Ga0496123_0041684 3300048926 Bacteria 3177
98 Ga0496125_0011185 3300048928 Bacteria 8995
99 Ga0496126_0001070 3300048929 Bacteria 46085
100 Ga0501251_002169 3300049681 Bacteria 1880
101 Ga0501269_000031 3300049766 Bacteria 44939
102 Ga0501269_001061 3300049766 Bacteria 3851
103 Ga0500622_0047586 3300053156 Bacteria 2215

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048905 Ga0496102_0008027 Ga0496102_0008027_1324_2358 330
2 3300009148 Ga0105243_10011831 Ga0105243_100118313 333
3 3300025935 Ga0207709_10083600 Ga0207709_100836002 333
4 3300048925 Ga0496122_0000665 Ga0496122_0000665_31664_32767 333
5 3300046660 Ga0495625_0000005 Ga0495625_0000005_135814_136911 336
6 3300046694 Ga0495649_0000003 Ga0495649_0000003_135835_136932 336
7 3300048919 Ga0496116_0000695 Ga0496116_0000695_34608_35660 336
8 3300053156 Ga0500622_0047586 Ga0500622_0047586_1008_2105 336
9 3300009092 Ga0105250_10006627 Ga0105250_100066272 339
10 3300015261 Ga0182006_1000001 Ga0182006_1000001747 339
11 3300046512 Ga0495610_0000005 Ga0495610_0000005_304013_305113 339
12 3300031911 Ga0307412_10000027 Ga0307412_1000002719 340
13 iso_pu_bacteria 2554235469 2556063829 344
14 iso_pu_bacteria 2938649242 2938654618 344
15 iso_pu_bacteria 2939593269 2939595057 344
16 iso_pu_bacteria 2945991243 2945996199 344
17 3300025291 Ga0209675_1005122 Ga0209675_10051222 345
18 3300013104 Ga0157370_10074370 Ga0157370_100743703 346
19 3300003751 Ga0055538_1000175 Ga0055538_10001756 347
20 3300025224 Ga0209784_100051 Ga0209784_10005114 347
21 3300048929 Ga0496126_0001070 Ga0496126_0001070_9533_10627 347
22 iso_pu_bacteria 2816332280 2817413504 347
23 iso_pu_bacteria 2919543075 2919543897 347
24 iso_pu_bacteria 2923525760 2923529127 347
25 iso_pu_bacteria 2928078545 2928080191 347
26 iso_pu_bacteria 2928147474 2928149636 347
27 3300009036 Ga0105244_10007013 Ga0105244_100070132 348
28 iso_pu_bacteria 2519899754 2520879580 348
29 iso_pu_bacteria 2537561728 2538427419 348
30 iso_pu_bacteria 2582581278 2585140993 348
31 iso_pu_bacteria 2585428045 2587677124 348
32 iso_pu_bacteria 2585428045 2587678729 348
33 iso_pu_bacteria 2585428060 2587746334 348
34 iso_pu_bacteria 2585428115 2587941782 348
35 iso_pu_bacteria 2585428183 2588215765 348
36 iso_pu_bacteria 2585428185 2588224664 348
37 iso_pu_bacteria 2588253712 2588447456 348
38 iso_pu_bacteria 2588254257 2590610092 348
39 iso_pu_bacteria 2728369107 2729200896 348
40 iso_pu_bacteria 2739367874 2740060316 348
41 iso_pu_bacteria 2751185877 2753674095 348
42 iso_pu_bacteria 2765235839 2765575565 348
43 iso_pu_bacteria 2772190705 2772603796 348
44 iso_pu_bacteria 2772190705 2772603801 348
45 iso_pu_bacteria 2775506739 2775674426 348
46 iso_pu_bacteria 2791355010 2792310354 348
47 iso_pu_bacteria 2842083920 2842087282 348
48 iso_pu_bacteria 2871272651 2871275365 348
49 iso_pu_bacteria 2871720351 2871723490 348
50 iso_pu_bacteria 2889290771 2889293924 348
51 iso_pu_bacteria 2905999023 2905999087 348
52 iso_pu_bacteria 2919097161 2919098042 348
53 iso_pu_bacteria 2919399522 2919403303 348
54 iso_pu_bacteria 2946019816 2946023980 348
55 iso_pu_bacteria 2977243572 2977243637 348
56 iso_pu_bacteria 2984572630 2984574906 348
57 iso_pu_bacteria 2984606641 2984608359 348
58 3300002773 JGI25152J39213_1000253 JGI25152J39213_100025327 351
59 3300002774 JGI25150J39212_1000186 JGI25150J39212_10001868 351
60 3300003187 JGI25151J46595_10000543 JGI25151J46595_100005438 351
61 3300003215 JGI25153J46596_10000323 JGI25153J46596_100003238 351
62 3300003856 Ga0058692_1007375 Ga0058692_10073752 351
63 3300005347 Ga0070668_100019909 Ga0070668_1000199093 351
64 3300006195 Ga0075366_10002723 Ga0075366_100027235 351
65 3300009553 Ga0105249_10006119 Ga0105249_100061195 351
66 3300013102 Ga0157371_10023078 Ga0157371_100230782 351
67 3300013104 Ga0157370_10001978 Ga0157370_1000197815 351
68 3300013306 Ga0163162_10003180 Ga0163162_100031802 351
69 3300025245 Ga0207425_1000051 Ga0207425_100005127 351
70 3300025258 Ga0209129_1000395 Ga0209129_10003958 351
71 3300025294 Ga0209025_1000160 Ga0209025_1000160131 351
72 3300025297 Ga0209758_1000147 Ga0209758_1000147131 351
73 3300025904 Ga0207647_10065396 Ga0207647_100653963 351
74 3300025972 Ga0207668_10013244 Ga0207668_100132443 351
75 3300027312 Ga0209371_1004478 Ga0209371_10044785 351
76 3300030500 Ga0268256_1003839 Ga0268256_10038395 351
77 3300044706 Ga0466964_0096197 Ga0466964_0096197_36_1145 351
78 3300046471 Ga0495650_0000003 Ga0495650_0000003_16062_17159 351
79 3300046665 Ga0495661_0010722 Ga0495661_0010722_1738_2835 351
80 3300046665 Ga0495661_0040840 Ga0495661_0040840_137_1240 351
81 iso_pu_bacteria 2844665904 2844669970 351
82 3300001915 JGI24741J21665_1000053 JGI24741J21665_100005317 352
83 3300005327 Ga0070658_10006614 Ga0070658_100066143 352
84 3300005329 Ga0070683_100211114 Ga0070683_1002111142 352
85 3300005336 Ga0070680_100001637 Ga0070680_1000016377 352
86 3300005337 Ga0070682_100001572 Ga0070682_10000157210 352
87 3300005366 Ga0070659_100231448 Ga0070659_1002314482 352
88 3300005455 Ga0070663_100002334 Ga0070663_1000023348 352
89 3300005458 Ga0070681_10042720 Ga0070681_100427203 352
90 3300005530 Ga0070679_100006816 Ga0070679_1000068168 352
91 3300005563 Ga0068855_100025158 Ga0068855_1000251588 352
92 3300005614 Ga0068856_100010809 Ga0068856_1000108096 352
93 3300009148 Ga0105243_10131378 Ga0105243_101313782 352
94 3300013100 Ga0157373_10001865 Ga0157373_100018655 352
95 3300013102 Ga0157371_10010711 Ga0157371_100107115 352
96 3300013102 Ga0157371_10013179 Ga0157371_100131793 352
97 3300013104 Ga0157370_10001124 Ga0157370_100011246 352
98 3300013104 Ga0157370_10002801 Ga0157370_100028016 352
99 3300013104 Ga0157370_10007629 Ga0157370_100076296 352
100 3300013105 Ga0157369_10000939 Ga0157369_1000093914 352
101 3300013105 Ga0157369_10013322 Ga0157369_100133223 352
102 3300013307 Ga0157372_10002279 Ga0157372_100022796 352
103 3300013307 Ga0157372_10035427 Ga0157372_100354274 352
104 3300013307 Ga0157372_10076649 Ga0157372_100766493 352
105 3300013308 Ga0157375_10480829 Ga0157375_104808291 352
106 3300014497 Ga0182008_10000003 Ga0182008_1000000387 352
107 3300025909 Ga0207705_10024639 Ga0207705_100246393 352
108 3300025912 Ga0207707_10189121 Ga0207707_101891212 352
109 3300025917 Ga0207660_10040341 Ga0207660_100403411 352
110 3300025921 Ga0207652_10000203 Ga0207652_1000020340 352
111 3300025932 Ga0207690_10207267 Ga0207690_102072672 352
112 3300025949 Ga0207667_10020730 Ga0207667_100207306 352
113 3300026067 Ga0207678_10001948 Ga0207678_1000194810 352
114 3300026078 Ga0207702_10128179 Ga0207702_101281792 352
115 3300032002 Ga0307416_100000006 Ga0307416_100000006188 352
116 3300032004 Ga0307414_10000011 Ga0307414_10000011298 352
117 3300032004 Ga0307414_10105634 Ga0307414_101056343 352
118 3300037312 Ga0395899_0004336 Ga0395899_0004336_7659_8777 352
119 3300037312 Ga0395899_0157661 Ga0395899_0157661_225_1346 352
120 3300037418 Ga0395900_0020802 Ga0395900_0020802_3252_4373 352
121 3300037418 Ga0395900_0028485 Ga0395900_0028485_3202_4320 352
122 3300037466 Ga0395898_0008950 Ga0395898_0008950_1445_2563 352
123 3300037466 Ga0395898_0020134 Ga0395898_0020134_4058_5179 352
124 3300037471 Ga0395905_0063914 Ga0395905_0063914_1685_2806 352
125 3300038443 Ga0395901_0015290 Ga0395901_0015290_733_1854 352
126 3300038443 Ga0395901_0094698 Ga0395901_0094698_539_1657 352
127 3300042004 Ga0439445_0003789 Ga0439445_0003789_182_1282 352
128 3300046616 Ga0495668_0000097 Ga0495668_0000097_89336_90436 352
129 3300048920 Ga0496117_0000007 Ga0496117_0000007_206639_207739 352
130 3300048920 Ga0496117_0015526 Ga0496117_0015526_5304_6404 352
131 3300048921 Ga0496118_0000104 Ga0496118_0000104_118953_120053 352
132 3300048922 Ga0496119_0000007 Ga0496119_0000007_206706_207806 352
133 3300048925 Ga0496122_0000222 Ga0496122_0000222_80358_81458 352
134 3300048925 Ga0496122_0000724 Ga0496122_0000724_52856_53956 352
135 3300048925 Ga0496122_0003160 Ga0496122_0003160_11423_12523 352
136 3300048925 Ga0496122_0008156 Ga0496122_0008156_9694_10794 352
137 3300048925 Ga0496122_0055346 Ga0496122_0055346_992_2092 352
138 3300048926 Ga0496123_0000592 Ga0496123_0000592_11065_12165 352
139 3300048926 Ga0496123_0041684 Ga0496123_0041684_1794_2894 352
140 3300048928 Ga0496125_0011185 Ga0496125_0011185_6154_7254 352
141 3300049681 Ga0501251_002169 Ga0501251_002169_237_1337 352
142 3300049766 Ga0501269_000031 Ga0501269_000031_6213_7313 352
143 3300049766 Ga0501269_001061 Ga0501269_001061_577_1677 352

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

13

368

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7n63-assembly1.cif.gz_A-2 x-ray structure of hcan_0200, an aminotransferase from helicobacter canadensis in complex with its external aldimine 0.9671 1 352
7n63-assembly1.cif.gz_A-2 x-ray structure of hcan_0200, an aminotransferase from helicobacter canadensis in complex with its external aldimine 0.9644 1 352
5u1z-assembly2.cif.gz_C x-ray structure of the wlarg aminotransferase, apo form, from campylobacter jejune 0.9575 1 352
5u24-assembly2.cif.gz_D x-ray structure of the wlarg aminotransferase from campylobacter jejuni, k184a mutant in complex with tdp-fuc3n 0.9574 1 352
3frk-assembly1.cif.gz_B x-ray structure of qdtb from t. thermosaccharolyticum in complex with a plp:tdp-3-aminoquinovose aldimine 0.9571 2 352
ID Description Score Start End Superfamily
5u1zC02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9758 236 352 3.90.1150.10
5u1zC02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9433 236 352 3.90.1150.10
3frkB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9429 236 352 3.90.1150.10
2ogaB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9389 236 351 3.90.1150.10
3bb8A01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9387 17 233 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A0F9QKC3-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9913 1 137 GO:0000271
GO:0008483
GO:0030170
AF-A0A0F9QKC3-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9842 1 137 GO:0000271
GO:0008483
GO:0030170
AF-A0A7C4TEN6-F1-model_v4 Aminotransferase class V-fold PLP-dependent enzyme 0.9833 2 352 GO:0000271
GO:0008483
GO:0030170
AF-A0A7W5DPN6-F1-model_v4 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.983 2 352 GO:0000271
GO:0008483
GO:0030170
AF-A0A7C3IWQ5-F1-model_v4 DegT/DnrJ/EryC1/StrS family aminotransferase 0.9829 4 352 GO:0000271
GO:0008483
GO:0030170

Feature Viewer

pLDDT pTM Quality
94.41 0.91 High
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Predicted Structure (AlphaFold2)

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