F186975

General Info

Members Datasets Scaffolds Average Seq Length
142 91 284 496

Family's Representative Sequence

Representative Sequence 3300049583|Ga0501067_0039838|Ga0501067_0039838_831_2456
Length 541
Sequence MSLRPRTRPREGTNRIALAAVGLAVAGAAFVASSGVAGAQELVPDVDTLAKSTNLLWVVIGAVLVIFMQAGFALVETGFCRAKHAAHVVSTNFAIFGLGFVGFFCVGYGLMFGGYSLPLIGMDKAAGGPLIGHGESIFLFKGGFFLTDIVSQGAGGAAALGFFLYMVAFMDTVATIPTGAMAERWKWNSFALWGVFCGAIYYPIFGAWTWGGGWLSQLGNSMDLGYGYVDFAGSGVVHSVGAAAGLAGAIVLGPRIGKFNADKSANTIPGHHIPMAMLGCFILLFGWFGFNAASTFASTDVQFATVATNTAIAGAFGAVISMLYMQMTTGKPDPGMMVNGMLGGLVAITAPCAFVDPWAAALIGSIAGVLAPWAVGFIERRGIDDPVGAIAVHGFCGSFGVLAVGLFGNGLYGAGWNVTTDGKMFDSGKGVMGIFGGDFELGLRQLGAQAIGVLVIWTVIFGIALAFFKIQNKLTKGGIRPSEEMELEGMDMPEMGALAYPEFEPFADSSVIGAGVGGGSPTLEAPVVGYTSPLGTRPETS

Samples

Sample ID Description Type Environment
1 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
4 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
5 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
6 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
10 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
13 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
21 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
22 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
23 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
24 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
25 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
35 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
37 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
38 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
39 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
40 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
41 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
42 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
43 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
44 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
45 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
46 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
47 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
48 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
49 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
50 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
51 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
52 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
53 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
54 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
55 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
56 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
57 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
64 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
65 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
66 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
67 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
68 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
69 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
70 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
71 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
72 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
73 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
74 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
75 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
76 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
77 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
78 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
79 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
80 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
81 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
82 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
83 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
84 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
85 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
86 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
87 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
88 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
89 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
90 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
91 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.3
Metatranscriptomes 0.7
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.42
Nodule 0
Rhizoplane 4.23
Rhizosphere 75.35
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501067_0039838 3300049583 Bacteria 2609
2 Ga0070668_100113571 3300005347 Bacteria 2158
3 Ga0070671_100003221 3300005355 Bacteria 12721
4 Ga0068863_100013349 3300005841 Bacteria 7920
5 Ga0068858_100044907 3300005842 Bacteria 4095
6 Ga0068860_100012215 3300005843 Bacteria 8462
7 Ga0081455_10001630 3300005937 Bacteria 27385
8 Ga0081455_10002784 3300005937 Bacteria 20599
9 Ga0081455_10021190 3300005937 Bacteria 6104
10 Ga0081455_10021427 3300005937 Bacteria 6062
11 Ga0081455_10087428 3300005937 Bacteria 2535
12 Ga0081539_10008855 3300005985 Bacteria 8605
13 Ga0075365_10001942 3300006038 Bacteria 9759
14 Ga0075365_10002714 3300006038 Bacteria 8820
15 Ga0075365_10004216 3300006038 Bacteria 7575
16 Ga0075363_100024237 3300006048 Bacteria 3083
17 Ga0075363_100027714 3300006048 Bacteria 2907
18 Ga0075363_100038261 3300006048 Bacteria 2522
19 Ga0075364_10001125 3300006051 Bacteria 14277
20 Ga0075364_10011965 3300006051 Bacteria 5288
21 Ga0075367_10017493 3300006178 Bacteria 3935
22 Ga0075367_10032975 3300006178 Bacteria 2983
23 Ga0068871_100174176 3300006358 Bacteria 1846
24 Ga0075428_100001455 3300006844 Bacteria 25325
25 Ga0075428_100005376 3300006844 Bacteria 14240
26 Ga0075430_100009657 3300006846 Bacteria 8151
27 Ga0075430_100010717 3300006846 Bacteria 7769
28 Ga0075430_100020264 3300006846 Bacteria 5659
29 Ga0075431_100000097 3300006847 Bacteria 54368
30 Ga0075429_100004753 3300006880 Bacteria 11693
31 Ga0075429_100009046 3300006880 Bacteria 8651
32 Ga0075429_100025534 3300006880 Bacteria 5128
33 Ga0075429_100027348 3300006880 Bacteria 4950
34 Ga0075429_100030849 3300006880 Bacteria 4658
35 Ga0075429_100188411 3300006880 Bacteria 1808
36 Ga0111539_10002357 3300009094 Bacteria 25105
37 Ga0114129_10029661 3300009147 Bacteria 7747
38 Ga0114129_10141290 3300009147 Bacteria 3300
39 Ga0105249_10073533 3300009553 Bacteria 3162
40 Ga0163163_10006356 3300014325 Bacteria 10316
41 Ga0157379_10161455 3300014968 Bacteria 2023
42 Ga0157376_10082837 3300014969 Bacteria 2758
43 Ga0163161_10015892 3300017792 Bacteria 5251
44 Ga0207659_10048577 3300025926 Bacteria 3006
45 Ga0207644_10014631 3300025931 Bacteria 5254
46 Ga0207709_10059705 3300025935 Bacteria 2375
47 Ga0207669_10127299 3300025937 Bacteria 1743
48 Ga0207712_10041382 3300025961 Bacteria 3167
49 Ga0207668_10029766 3300025972 Bacteria 3582
50 Ga0207703_10010137 3300026035 Bacteria 7386
51 Ga0207641_10046869 3300026088 Bacteria 3644
52 Ga0207676_10095677 3300026095 Bacteria 2450
53 Ga0207428_10010302 3300027907 Bacteria 8355
54 Ga0268264_10003361 3300028381 Bacteria 13828
55 Ga0307409_100026513 3300031995 Bacteria 4088
56 Ga0316574_0013688 3300035398 Bacteria 4670
57 Ga0373931_0000040 3300035691 Bacteria 72842
58 Ga0439463_001772 3300042016 Bacteria 5612
59 Ga0451577_0005166 3300042876 Bacteria 13424
60 Ga0439440_0003222 3300042993 Bacteria 3131
61 Ga0453683_0000097 3300044673 Bacteria 132392
62 Ga0453684_0003413 3300044712 Bacteria 35884
63 Ga0453684_0065343 3300044712 Bacteria 4640
64 Ga0453684_0066899 3300044712 Bacteria 4573
65 Ga0495651_0037657 3300046462 Bacteria 3766
66 Ga0495621_0011624 3300046539 Bacteria 2729
67 Ga0495657_0005196 3300046675 Bacteria 10310
68 Ga0495647_0033256 3300046681 Bacteria 1926
69 Ga0495658_0020821 3300046683 Bacteria 3449
70 Ga0495672_0002705 3300047320 Bacteria 15904
71 Ga0495675_0025081 3300047444 Bacteria 3803
72 Ga0495602_0121521 3300048088 Bacteria 2100
73 Ga0496102_0019716 3300048905 Bacteria 5944
74 Ga0496104_0116670 3300048907 Bacteria 2562
75 Ga0496110_0008915 3300048913 Bacteria 8086
76 Ga0496111_0051196 3300048914 Bacteria 2981
77 Ga0496114_0003957 3300048917 Bacteria 11433
78 Ga0496114_0046387 3300048917 Bacteria 3611
79 Ga0501033_0001920 3300049570 Bacteria 18095
80 Ga0501034_0000282 3300049571 Bacteria 91445
81 Ga0501034_0003542 3300049571 Bacteria 17737
82 Ga0501034_0016600 3300049571 Bacteria 7549
83 Ga0501034_0050692 3300049571 Bacteria 4186
84 Ga0501034_0207126 3300049571 Bacteria 1917
85 Ga0501037_0001318 3300049573 Bacteria 18213
86 Ga0501043_0004299 3300049579 Bacteria 11595
87 Ga0501046_0017495 3300049580 Bacteria 5980
88 Ga0501047_0042848 3300049581 Bacteria 4372
89 Ga0501047_0054438 3300049581 Bacteria 3870
90 Ga0501068_0000369 3300049584 Bacteria 22681
91 Ga0501068_0003391 3300049584 Bacteria 8566
92 Ga0501069_0002890 3300049585 Bacteria 8818
93 Ga0501071_0001021 3300049587 Bacteria 15425
94 Ga0501072_0002343 3300049588 Bacteria 14214
95 Ga0501072_0081856 3300049588 Bacteria 2559
96 Ga0501073_0000071 3300049589 Bacteria 62958
97 Ga0501073_0003301 3300049589 Bacteria 12121
98 Ga0501074_0002009 3300049590 Bacteria 14021
99 Ga0501074_0012307 3300049590 Bacteria 6218
100 Ga0501076_0019378 3300049592 Bacteria 5201
101 Ga0501077_0005209 3300049593 Bacteria 7899
102 Ga0501079_0005136 3300049741 Bacteria 9730
103 Ga0501079_0186339 3300049741 Bacteria 1620
104 Ga0501080_0004283 3300049742 Bacteria 12668
105 Ga0501080_0026091 3300049742 Bacteria 5428
106 Ga0501080_0210295 3300049742 Bacteria 1783
107 Ga0501083_0002295 3300049744 Bacteria 13092
108 Ga0501083_0054780 3300049744 Bacteria 2675
109 Ga0501083_0065958 3300049744 Bacteria 2411
110 Ga0501044_0000932 3300049823 Bacteria 35145
111 Ga0501044_0003975 3300049823 Bacteria 16560
112 nmdc:mga03683_45634_c1 3300050489 Bacteria 1814
113 nmdc:mga03n38_26039_c1 3300050490 Bacteria 2411
114 nmdc:mga03n38_9489_c1 3300050490 Bacteria 3543
115 nmdc:mga00v17_2601_c1 3300050491 Bacteria 9255
116 nmdc:mga00v17_37157_c1 3300050491 Bacteria 2906
117 nmdc:mga00v17_665_c1 3300050491 Bacteria 18923
118 nmdc:mga0yw44_1398_c1 3300050492 Bacteria 9570
119 nmdc:mga0yw44_2365_c1 3300050492 Bacteria 8005
120 nmdc:mga0yw44_23801_c1 3300050492 Bacteria 3455
121 nmdc:mga0yw44_379_c1 3300050492 Bacteria 15437
122 nmdc:mga06z11_32966_c1 3300050494 Bacteria 2530
123 nmdc:mga06z11_5925_c1 3300050494 Bacteria 4938
124 nmdc:mga04h51_10254_c1 3300050495 Bacteria 2568
125 nmdc:mga09592_6560_c1 3300050508 Bacteria 9474
126 nmdc:mga0qj67_20764_c1 3300050509 Bacteria 5029
127 nmdc:mga0qj67_40970_c1 3300050509 Bacteria 3642
128 nmdc:mga06r32_433_c1 3300050510 Bacteria 35354
129 nmdc:mga06r32_46463_c1 3300050510 Bacteria 4143
130 nmdc:mga08y16_25971_c1 3300050511 Bacteria 6179
131 nmdc:mga08y16_26893_c1 3300050511 Bacteria 6063
132 Ga0495619_0036426 3300053085 Bacteria 3204
133 Ga0500566_0000154 3300053094 Bacteria 35104
134 Ga0500568_0000030 3300053139 Bacteria 159567
135 Ga0500604_0014088 3300053151 Bacteria 2174
136 Ga0500616_0000200 3300053153 Bacteria 97730
137 Ga0500616_0004601 3300053153 Bacteria 9748
138 Ga0500616_0021337 3300053153 Bacteria 3633
139 Ga0501084_0000148 3300054114 Bacteria 53108
140 Ga0501084_0002416 3300054114 Bacteria 15019
141 Ga0501084_0035850 3300054114 Bacteria 4146
142 Ga0587082_002484 3300059504 Bacteria 2086
143 Ga0501067_0039838
144 Ga0070668_100113571
145 Ga0070671_100003221
146 Ga0068863_100013349
147 Ga0068858_100044907
148 Ga0068860_100012215
149 Ga0081455_10001630
150 Ga0081455_10002784
151 Ga0081455_10021190
152 Ga0081455_10021427
153 Ga0081455_10087428
154 Ga0081539_10008855
155 Ga0075365_10001942
156 Ga0075365_10002714
157 Ga0075365_10004216
158 Ga0075363_100024237
159 Ga0075363_100027714
160 Ga0075363_100038261
161 Ga0075364_10001125
162 Ga0075364_10011965
163 Ga0075367_10017493
164 Ga0075367_10032975
165 Ga0068871_100174176
166 Ga0075428_100001455
167 Ga0075428_100005376
168 Ga0075430_100009657
169 Ga0075430_100010717
170 Ga0075430_100020264
171 Ga0075431_100000097
172 Ga0075429_100004753
173 Ga0075429_100009046
174 Ga0075429_100025534
175 Ga0075429_100027348
176 Ga0075429_100030849
177 Ga0075429_100188411
178 Ga0111539_10002357
179 Ga0114129_10029661
180 Ga0114129_10141290
181 Ga0105249_10073533
182 Ga0163163_10006356
183 Ga0157379_10161455
184 Ga0157376_10082837
185 Ga0163161_10015892
186 Ga0207659_10048577
187 Ga0207644_10014631
188 Ga0207709_10059705
189 Ga0207669_10127299
190 Ga0207712_10041382
191 Ga0207668_10029766
192 Ga0207703_10010137
193 Ga0207641_10046869
194 Ga0207676_10095677
195 Ga0207428_10010302
196 Ga0268264_10003361
197 Ga0307409_100026513
198 Ga0316574_0013688
199 Ga0373931_0000040
200 Ga0439463_001772
201 Ga0451577_0005166
202 Ga0439440_0003222
203 Ga0453683_0000097
204 Ga0453684_0003413
205 Ga0453684_0065343
206 Ga0453684_0066899
207 Ga0495651_0037657
208 Ga0495621_0011624
209 Ga0495657_0005196
210 Ga0495647_0033256
211 Ga0495658_0020821
212 Ga0495672_0002705
213 Ga0495675_0025081
214 Ga0495602_0121521
215 Ga0496102_0019716
216 Ga0496104_0116670
217 Ga0496110_0008915
218 Ga0496111_0051196
219 Ga0496114_0003957
220 Ga0496114_0046387
221 Ga0501033_0001920
222 Ga0501034_0000282
223 Ga0501034_0003542
224 Ga0501034_0016600
225 Ga0501034_0050692
226 Ga0501034_0207126
227 Ga0501037_0001318
228 Ga0501043_0004299
229 Ga0501046_0017495
230 Ga0501047_0042848
231 Ga0501047_0054438
232 Ga0501068_0000369
233 Ga0501068_0003391
234 Ga0501069_0002890
235 Ga0501071_0001021
236 Ga0501072_0002343
237 Ga0501072_0081856
238 Ga0501073_0000071
239 Ga0501073_0003301
240 Ga0501074_0002009
241 Ga0501074_0012307
242 Ga0501076_0019378
243 Ga0501077_0005209
244 Ga0501079_0005136
245 Ga0501079_0186339
246 Ga0501080_0004283
247 Ga0501080_0026091
248 Ga0501080_0210295
249 Ga0501083_0002295
250 Ga0501083_0054780
251 Ga0501083_0065958
252 Ga0501044_0000932
253 Ga0501044_0003975
254 nmdc:mga03683_45634_c1
255 nmdc:mga03n38_26039_c1
256 nmdc:mga03n38_9489_c1
257 nmdc:mga00v17_2601_c1
258 nmdc:mga00v17_37157_c1
259 nmdc:mga00v17_665_c1
260 nmdc:mga0yw44_1398_c1
261 nmdc:mga0yw44_2365_c1
262 nmdc:mga0yw44_23801_c1
263 nmdc:mga0yw44_379_c1
264 nmdc:mga06z11_32966_c1
265 nmdc:mga06z11_5925_c1
266 nmdc:mga04h51_10254_c1
267 nmdc:mga09592_6560_c1
268 nmdc:mga0qj67_20764_c1
269 nmdc:mga0qj67_40970_c1
270 nmdc:mga06r32_433_c1
271 nmdc:mga06r32_46463_c1
272 nmdc:mga08y16_25971_c1
273 nmdc:mga08y16_26893_c1
274 Ga0495619_0036426
275 Ga0500566_0000154
276 Ga0500568_0000030
277 Ga0500604_0014088
278 Ga0500616_0000200
279 Ga0500616_0004601
280 Ga0500616_0021337
281 Ga0501084_0000148
282 Ga0501084_0002416
283 Ga0501084_0035850
284 Ga0587082_002484

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00909

Ammonium_transp

Ammonium Transporter Family

56

500

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6eu6-assembly1.cif.gz_A sensor amt protein 0.899 38 458
6eu6-assembly1.cif.gz_A sensor amt protein 0.8862 38 458
2b2f-assembly1.cif.gz_A ammonium transporter amt-1 from a.fulgidus (native) 0.8859 42 458
2b2f-assembly1.cif.gz_A ammonium transporter amt-1 from a.fulgidus (native) 0.8619 42 458
2npg-assembly1.cif.gz_A an unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance 0.8603 40 447
ID Description Score Start End Superfamily
af_Q9BLG3_4_431_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.9024 29 458 1.10.3430.10
af_Q9VFA9_21_443_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.8979 43 457 1.10.3430.10
af_Q58739_8_419_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.8917 36 458 1.10.3430.10
af_Q60366_3_391_1.10.3430.10 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.8855 43 456 1.10.3430.10
2b2hA00 Mainly Alpha;Orthogonal Bundle;Ammonium transporter fold;Ammonium transporter AmtB like domains 0.8848 42 458 1.10.3430.10
ID Description Score Start End GO Terms
AF-A0A534V7Y9-F1-model_v4 Ammonium transporter 0.9766 212 390 GO:0008519
GO:0016020
GO:0097272
AF-A0A7V3FWK3-F1-model_v4 Ammonium transporter 0.9755 137 458 GO:0008519
GO:0016020
GO:0097272
AF-A0A6T8NT61-F1-model_v4 Ammonium transporter AmtB-like domain-containing protein 0.9695 205 365 GO:0005886
GO:0008519
GO:0097272
AF-A0A2V6YH32-F1-model_v4 Ammonium transporter 0.9687 200 464 GO:0008519
GO:0016020
GO:0097272
AF-A0A363TNV1-F1-model_v4 Ammonium transporter 0.9639 245 456 GO:0008519
GO:0016020
GO:0097272

Map