F186585

General Info

Members Datasets Scaffolds Average Seq Length
142 84 142 540

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0000862|Ga0453684_0000862_92107_93903
Length 598
Sequence MVNKNIVTGDAVEGRGRFCESCRKVAEDPLAPVVVLRQNSADYLPKEQHAMSNRIYVIGHRNPDTDSIAAAIGYAELKGRGDGAEVIAAMAGEPNPQTRYILDRLRIPDPLYLADVHPKVRDTLNRRPVTVATTASAYEALELFHASGVRVLPVLDGQGRPCGVLSLLRLSEKYLVPSREQQREITTTIDALKRTLSGRLVAGGADGEAITLQLFIGAMLEESFSSRIDGFDPKELLIMTGNRRTIQQAAIERGVRLLVVTGDLAPDDDLLAMARDNGVTVLLTPHDTATAAWLARLSTPVALFAEQKYASIGTGEPLTHLRQKLLTSGEAAVLVLEEDGTLAGVATKSSLLAPLPYALILVDHNEPGQAVPGADTVEILEVIDHHKLGNSHTMAPIDFITAPVGSTCTLVAGRYRESGIEPERTIAALLLAGILSDTVILKSPTTTMTDRSTVAWLEKLAGVDAAEFGREIFAASSSLKNYGSAERAVNADFKLFKHEKHAIGVGQVEVVGFDEFHEMKGELLAALAEVKRRDNLFIAGLMVTDIATETTLFLVEGHTRIAHVMEYPQLEPHLYELKNVMSRKKQMVPHLLKILGKV

Samples

Sample ID Description Type Environment
1 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
2 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
3 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
4 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
5 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
6 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
9 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
12 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
13 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
15 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
16 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
17 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
18 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
19 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
20 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
21 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
22 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
23 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
24 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
25 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
41 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
42 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
43 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
44 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
45 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
46 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
47 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
48 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
49 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
50 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
51 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
54 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
55 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
56 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
57 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
58 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
59 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
60 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
68 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
69 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
70 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
71 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
72 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
73 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
74 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
75 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
76 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
77 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
78 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
79 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
80 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
83 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
84 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.7
Nodule 0
Rhizoplane 9.86
Rhizosphere 85.21
Stem 0
Stem Tuber 0
Unclassified 4.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070711_100070576 3300005439 Bacteria 2460
2 Ga0070685_10012524 3300005466 Bacteria 4459
3 Ga0070686_100023149 3300005544 Bacteria 3709
4 Ga0068854_100070789 3300005578 Bacteria 2550
5 Ga0068854_100150400 3300005578 Bacteria 1794
6 Ga0070702_100071769 3300005615 Bacteria 2047
7 Ga0068861_100078569 3300005719 Bacteria 2577
8 Ga0068861_100090391 3300005719 Bacteria 2415
9 Ga0081455_10084633 3300005937 Bacteria 2588
10 Ga0081538_10002305 3300005981 Bacteria 18858
11 Ga0081538_10013475 3300005981 Bacteria 6466
12 Ga0081538_10023581 3300005981 Bacteria 4418
13 Ga0081540_1004457 3300005983 Bacteria 10668
14 Ga0081539_10002046 3300005985 Bacteria 30317
15 Ga0081539_10010699 3300005985 Bacteria 7397
16 Ga0075431_100011715 3300006847 Bacteria 8846
17 Ga0075434_100138447 3300006871 Bacteria 2454
18 Ga0111539_10095599 3300009094 Bacteria 3490
19 Ga0105245_10048623 3300009098 Bacteria 3794
20 Ga0105247_10051918 3300009101 Bacteria 2526
21 Ga0105243_10075643 3300009148 Bacteria 2734
22 Ga0105243_10132453 3300009148 Bacteria 2117
23 Ga0105242_10027602 3300009176 Bacteria 4511
24 Ga0105248_10313198 3300009177 Bacteria 1768
25 Ga0105249_10143964 3300009553 Bacteria 2288
26 Ga0163162_10063367 3300013306 Bacteria 3739
27 Ga0157375_10268180 3300013308 Bacteria 1869
28 Ga0157379_10005080 3300014968 Bacteria 11284
29 Ga0213874_10003909 3300021377 Bacteria 3352
30 Ga0213875_10000050 3300021388 Bacteria 143822
31 Ga0207692_10041193 3300025898 Bacteria 2285
32 Ga0207688_10004517 3300025901 Bacteria 7575
33 Ga0207688_10054553 3300025901 Bacteria 2242
34 Ga0207657_10113070 3300025919 Bacteria 2240
35 Ga0207644_10037179 3300025931 Bacteria 3424
36 Ga0207706_10056315 3300025933 Bacteria 3467
37 Ga0207669_10120851 3300025937 Bacteria 1778
38 Ga0207691_10147674 3300025940 Bacteria 2068
39 Ga0207711_10099498 3300025941 Bacteria 2571
40 Ga0207712_10069655 3300025961 Bacteria 2524
41 Ga0207677_10028706 3300026023 Bacteria 3524
42 Ga0207678_10145770 3300026067 Bacteria 2021
43 Ga0207708_10071591 3300026075 Bacteria 2656
44 Ga0207648_10131572 3300026089 Bacteria 2202
45 Ga0207675_100006465 3300026118 Bacteria 11097
46 Ga0207675_100059342 3300026118 Bacteria 3570
47 Ga0207675_100101534 3300026118 Bacteria 2710
48 Ga0268265_10084204 3300028380 Bacteria 2520
49 Ga0307405_10011551 3300031731 Bacteria 4637
50 Ga0307405_10030086 3300031731 Bacteria 3181
51 Ga0307413_10005688 3300031824 Bacteria 5597
52 Ga0307413_10010747 3300031824 Bacteria 4459
53 Ga0307413_10058347 3300031824 Bacteria 2365
54 Ga0307410_10095447 3300031852 Bacteria 2120
55 Ga0307410_10099379 3300031852 Bacteria 2083
56 Ga0307406_10056649 3300031901 Bacteria 2511
57 Ga0307407_10023983 3300031903 Bacteria 3191
58 Ga0307409_100008838 3300031995 Bacteria 6145
59 Ga0307409_100017002 3300031995 Bacteria 4834
60 Ga0307409_100019208 3300031995 Bacteria 4621
61 Ga0307409_100103234 3300031995 Bacteria 2371
62 Ga0307409_100112678 3300031995 Bacteria 2284
63 Ga0307414_10048418 3300032004 Bacteria 2932
64 Ga0307414_10086759 3300032004 Bacteria 2310
65 Ga0307411_10020932 3300032005 Bacteria 3816
66 Ga0307415_100000068 3300032126 Bacteria 43162
67 Ga0307415_100070910 3300032126 Bacteria 2448
68 Ga0373928_0002212 3300035084 Bacteria 3786
69 Ga0373932_0012989 3300035112 Bacteria 2062
70 Ga0436364_0750607 3300037853 Bacteria 104121
71 Ga0436365_0639938 3300039437 Bacteria 10486
72 Ga0436363_0439271 3300039450 Bacteria 12724
73 Ga0436362_0765432 3300039453 Bacteria 2389
74 Ga0451577_0000102 3300042876 Bacteria 188094
75 Ga0451577_0000145 3300042876 Bacteria 157254
76 Ga0451577_0000224 3300042876 Bacteria 116252
77 Ga0451577_0003728 3300042876 Bacteria 16636
78 Ga0451577_0030488 3300042876 Bacteria 4873
79 Ga0451577_0057402 3300042876 Unclassified 3470
80 Ga0451577_0156081 3300042876 Bacteria 2054
81 Ga0453683_0000001 3300044673 Bacteria 1384965
82 Ga0453683_0000051 3300044673 Bacteria 201733
83 Ga0453683_0002785 3300044673 Bacteria 13298
84 Ga0453683_0004254 3300044673 Bacteria 10221
85 Ga0453683_0005377 3300044673 Bacteria 8947
86 Ga0453683_0010239 3300044673 Bacteria 6221
87 Ga0453683_0019814 3300044673 Bacteria 4304
88 Ga0466965_0040896 3300044683 Bacteria 2283
89 Ga0466966_0081747 3300044684 Bacteria 2011
90 Ga0466961_0044295 3300044693 Bacteria 2847
91 Ga0466963_0010409 3300044694 Bacteria 5629
92 Ga0466963_0017290 3300044694 Bacteria 4494
93 Ga0466963_0020781 3300044694 Bacteria 4132
94 Ga0466963_0034457 3300044694 Bacteria 3294
95 Ga0466963_0067158 3300044694 Bacteria 2406
96 Ga0466963_0135529 3300044694 Bacteria 1703
97 Ga0453684_0000229 3300044712 Bacteria 241494
98 Ga0453684_0000249 3300044712 Bacteria 232232
99 Ga0453684_0000465 3300044712 Bacteria 161517
100 Ga0453684_0000862 3300044712 Bacteria 101969
101 Ga0453684_0004145 3300044712 Bacteria 31372
102 Ga0453684_0006977 3300044712 Bacteria 21144
103 Ga0453684_0012077 3300044712 Bacteria 14342
104 Ga0453684_0013212 3300044712 Bacteria 13461
105 Ga0453684_0013510 3300044712 Bacteria 13251
106 Ga0453684_0061839 3300044712 Bacteria 4803
107 Ga0453684_0089884 3300044712 Bacteria 3795
108 Ga0453684_0097577 3300044712 Bacteria 3606
109 Ga0453684_0136655 3300044712 Bacteria 2934
110 Ga0453684_0289777 3300044712 Bacteria 1864
111 Ga0466960_0000054 3300044901 Bacteria 38136
112 Ga0466959_0028839 3300045049 Bacteria 4113
113 Ga0466959_0088341 3300045049 Bacteria 2228
114 Ga0451576_0000031 3300045051 Bacteria 399742
115 Ga0451576_0000410 3300045051 Bacteria 99675
116 Ga0451576_0000462 3300045051 Bacteria 91935
117 Ga0451576_0011295 3300045051 Bacteria 10162
118 Ga0451576_0029553 3300045051 Bacteria 5864
119 Ga0466958_0016427 3300045836 Bacteria 4262
120 Ga0466967_0049758 3300045976 Bacteria 3667
121 Ga0495650_0000055 3300046471 Bacteria 308438
122 Ga0496100_0001428 3300048903 Bacteria 11687
123 Ga0496101_0034899 3300048904 Bacteria 3554
124 Ga0496102_0168926 3300048905 Bacteria 2059
125 Ga0496103_0063469 3300048906 Bacteria 2301
126 Ga0496106_0003778 3300048909 Bacteria 11289
127 Ga0496106_0105806 3300048909 Bacteria 2186
128 Ga0496107_0000572 3300048910 Bacteria 20519
129 Ga0496108_0116849 3300048911 Bacteria 2285
130 Ga0496109_0115038 3300048912 Bacteria 2503
131 Ga0496110_0076790 3300048913 Bacteria 2970
132 Ga0496112_0040460 3300048915 Bacteria 4557
133 Ga0496112_0047660 3300048915 Bacteria 4204
134 Ga0496112_0105077 3300048915 Bacteria 2794
135 Ga0496113_0067531 3300048916 Bacteria 2711
136 Ga0496121_0001211 3300048924 Bacteria 44972
137 Ga0501039_0018561 3300049575 Bacteria 5340
138 nmdc:mga06r32_160476_c1 3300050510 Bacteria 2230
139 nmdc:mga06r32_9118_c1 3300050510 Bacteria 8944
140 nmdc:mga08y16_17731_c1 3300050511 Bacteria 7497
141 Ga0500616_0072241 3300053153 Bacteria 1754
142 Ga0466962_0001341 3300061719 Bacteria 11380

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005937 Ga0081455_10084633 Ga0081455_100846332 497
2 3300009177 Ga0105248_10313198 Ga0105248_103131981 498
3 3300025940 Ga0207691_10147674 Ga0207691_101476742 498
4 3300044693 Ga0466961_0044295 Ga0466961_0044295_236_1861 498
5 3300044694 Ga0466963_0017290 Ga0466963_0017290_1370_2995 498
6 3300045049 Ga0466959_0028839 Ga0466959_0028839_913_2538 498
7 3300045836 Ga0466958_0016427 Ga0466958_0016427_251_1876 498
8 3300061719 Ga0466962_0001341 Ga0466962_0001341_7395_9020 498
9 3300031731 Ga0307405_10030086 Ga0307405_100300863 501
10 3300031824 Ga0307413_10005688 Ga0307413_100056886 501
11 3300044694 Ga0466963_0135529 Ga0466963_0135529_21_1526 501
12 3300009148 Ga0105243_10132453 Ga0105243_101324531 519
13 3300048915 Ga0496112_0105077 Ga0496112_0105077_1048_2694 519
14 3300005981 Ga0081538_10013475 Ga0081538_100134757 524
15 3300044673 Ga0453683_0004254 Ga0453683_0004254_2964_4604 524
16 3300044694 Ga0466963_0034457 Ga0466963_0034457_1355_2974 527
17 3300045049 Ga0466959_0088341 Ga0466959_0088341_178_1797 527
18 3300042876 Ga0451577_0000224 Ga0451577_0000224_111673_113328 528
19 3300044712 Ga0453684_0000229 Ga0453684_0000229_20139_21794 528
20 3300045051 Ga0451576_0000410 Ga0451576_0000410_95189_96844 528
21 3300044712 Ga0453684_0013510 Ga0453684_0013510_8751_10397 529
22 3300044712 Ga0453684_0289777 Ga0453684_0289777_175_1821 529
23 3300042876 Ga0451577_0003728 Ga0451577_0003728_11965_13611 530
24 3300044673 Ga0453683_0002785 Ga0453683_0002785_8601_10247 530
25 3300044712 Ga0453684_0013212 Ga0453684_0013212_3052_4698 530
26 3300044694 Ga0466963_0010409 Ga0466963_0010409_920_2542 531
27 3300005578 Ga0068854_100150400 Ga0068854_1001504001 532
28 3300005615 Ga0070702_100071769 Ga0070702_1000717692 532
29 3300009098 Ga0105245_10048623 Ga0105245_100486232 532
30 3300009101 Ga0105247_10051918 Ga0105247_100519182 532
31 3300048903 Ga0496100_0001428 Ga0496100_0001428_1752_3392 532
32 3300048904 Ga0496101_0034899 Ga0496101_0034899_257_1897 532
33 3300048905 Ga0496102_0168926 Ga0496102_0168926_237_1883 532
34 3300048909 Ga0496106_0003778 Ga0496106_0003778_5658_7298 532
35 3300048910 Ga0496107_0000572 Ga0496107_0000572_1459_3099 532
36 3300006847 Ga0075431_100011715 Ga0075431_1000117159 536
37 3300050510 nmdc:mga06r32_9118_c1 nmdc:mga06r32_9118_c1_5888_7504 536
38 3300032004 Ga0307414_10048418 Ga0307414_100484182 537
39 3300035084 Ga0373928_0002212 Ga0373928_0002212_983_2635 537
40 3300035112 Ga0373932_0012989 Ga0373932_0012989_295_1947 537
41 3300042876 Ga0451577_0000102 Ga0451577_0000102_29632_31281 537
42 3300042876 Ga0451577_0000145 Ga0451577_0000145_4639_6294 537
43 3300042876 Ga0451577_0030488 Ga0451577_0030488_2838_4493 537
44 3300042876 Ga0451577_0057402 Ga0451577_0057402_1578_3227 537
45 3300042876 Ga0451577_0156081 Ga0451577_0156081_284_1957 537
46 3300044673 Ga0453683_0000001 Ga0453683_0000001_919690_921336 537
47 3300044673 Ga0453683_0000051 Ga0453683_0000051_20812_22458 537
48 3300044673 Ga0453683_0005377 Ga0453683_0005377_6848_8494 537
49 3300044673 Ga0453683_0010239 Ga0453683_0010239_2907_4559 537
50 3300044673 Ga0453683_0019814 Ga0453683_0019814_1991_3637 537
51 3300044712 Ga0453684_0000249 Ga0453684_0000249_200875_202524 537
52 3300044712 Ga0453684_0000465 Ga0453684_0000465_56451_58097 537
53 3300044712 Ga0453684_0000862 Ga0453684_0000862_92107_93903 537
54 3300044712 Ga0453684_0004145 Ga0453684_0004145_20803_22449 537
55 3300044712 Ga0453684_0006977 Ga0453684_0006977_1231_2877 537
56 3300044712 Ga0453684_0012077 Ga0453684_0012077_7761_9416 537
57 3300044712 Ga0453684_0061839 Ga0453684_0061839_2158_3813 537
58 3300044712 Ga0453684_0089884 Ga0453684_0089884_406_2052 537
59 3300044712 Ga0453684_0097577 Ga0453684_0097577_312_1967 537
60 3300044712 Ga0453684_0136655 Ga0453684_0136655_39_1688 537
61 3300045051 Ga0451576_0000031 Ga0451576_0000031_150348_151994 537
62 3300045051 Ga0451576_0000462 Ga0451576_0000462_83211_84857 537
63 3300045051 Ga0451576_0011295 Ga0451576_0011295_4803_6449 537
64 3300045051 Ga0451576_0029553 Ga0451576_0029553_3385_5031 537
65 3300021377 Ga0213874_10003909 Ga0213874_100039094 538
66 3300039437 Ga0436365_0639938 Ga0436365_0639938_4495_6111 538
67 3300039450 Ga0436363_0439271 Ga0436363_0439271_10020_11636 538
68 3300039453 Ga0436362_0765432 Ga0436362_0765432_657_2273 538
69 3300044684 Ga0466966_0081747 Ga0466966_0081747_349_1965 538
70 3300005985 Ga0081539_10002046 Ga0081539_100020469 539
71 3300009094 Ga0111539_10095599 Ga0111539_100955992 539
72 3300014968 Ga0157379_10005080 Ga0157379_100050805 539
73 3300021388 Ga0213875_10000050 Ga0213875_100000508 539
74 3300031824 Ga0307413_10010747 Ga0307413_100107473 539
75 3300031903 Ga0307407_10023983 Ga0307407_100239833 539
76 3300031995 Ga0307409_100008838 Ga0307409_1000088385 539
77 3300031995 Ga0307409_100019208 Ga0307409_1000192084 539
78 3300031995 Ga0307409_100103234 Ga0307409_1001032342 539
79 3300037853 Ga0436364_0750607 Ga0436364_0750607_928_2547 539
80 3300044683 Ga0466965_0040896 Ga0466965_0040896_430_2049 539
81 3300044694 Ga0466963_0020781 Ga0466963_0020781_2142_3761 539
82 3300044694 Ga0466963_0067158 Ga0466963_0067158_563_2209 539
83 3300044901 Ga0466960_0000054 Ga0466960_0000054_2728_4347 539
84 3300045976 Ga0466967_0049758 Ga0466967_0049758_1652_3298 539
85 3300046471 Ga0495650_0000055 Ga0495650_0000055_26893_28512 539
86 3300048915 Ga0496112_0040460 Ga0496112_0040460_2622_4250 539
87 3300048924 Ga0496121_0001211 Ga0496121_0001211_18669_20288 539
88 3300050510 nmdc:mga06r32_160476_c1 nmdc:mga06r32_160476_c1_477_2105 539
89 3300050511 nmdc:mga08y16_17731_c1 nmdc:mga08y16_17731_c1_486_2114 539
90 3300053153 Ga0500616_0072241 Ga0500616_0072241_39_1667 539
91 3300005981 Ga0081538_10002305 Ga0081538_100023059 540
92 3300005981 Ga0081538_10023581 Ga0081538_100235813 540
93 3300025933 Ga0207706_10056315 Ga0207706_100563154 540
94 3300031731 Ga0307405_10011551 Ga0307405_100115516 540
95 3300031824 Ga0307413_10058347 Ga0307413_100583472 540
96 3300031852 Ga0307410_10095447 Ga0307410_100954472 540
97 3300031852 Ga0307410_10099379 Ga0307410_100993792 540
98 3300031901 Ga0307406_10056649 Ga0307406_100566492 540
99 3300031995 Ga0307409_100017002 Ga0307409_1000170024 540
100 3300031995 Ga0307409_100112678 Ga0307409_1001126781 540
101 3300032004 Ga0307414_10086759 Ga0307414_100867591 540
102 3300032005 Ga0307411_10020932 Ga0307411_100209322 540
103 3300032126 Ga0307415_100000068 Ga0307415_1000000683 540
104 3300032126 Ga0307415_100070910 Ga0307415_1000709101 540
105 3300049575 Ga0501039_0018561 Ga0501039_0018561_823_2571 540
106 3300005439 Ga0070711_100070576 Ga0070711_1000705762 541
107 3300005466 Ga0070685_10012524 Ga0070685_100125242 541
108 3300005544 Ga0070686_100023149 Ga0070686_1000231493 541
109 3300005578 Ga0068854_100070789 Ga0068854_1000707891 541
110 3300005719 Ga0068861_100078569 Ga0068861_1000785692 541
111 3300005719 Ga0068861_100090391 Ga0068861_1000903912 541
112 3300005983 Ga0081540_1004457 Ga0081540_10044575 541
113 3300005985 Ga0081539_10010699 Ga0081539_100106992 541
114 3300006871 Ga0075434_100138447 Ga0075434_1001384472 541
115 3300009148 Ga0105243_10075643 Ga0105243_100756432 541
116 3300009176 Ga0105242_10027602 Ga0105242_100276025 541
117 3300009553 Ga0105249_10143964 Ga0105249_101439642 541
118 3300013306 Ga0163162_10063367 Ga0163162_100633674 541
119 3300013308 Ga0157375_10268180 Ga0157375_102681801 541
120 3300025898 Ga0207692_10041193 Ga0207692_100411932 541
121 3300025901 Ga0207688_10004517 Ga0207688_100045179 541
122 3300025901 Ga0207688_10054553 Ga0207688_100545532 541
123 3300025919 Ga0207657_10113070 Ga0207657_101130702 541
124 3300025931 Ga0207644_10037179 Ga0207644_100371792 541
125 3300025937 Ga0207669_10120851 Ga0207669_101208512 541
126 3300025941 Ga0207711_10099498 Ga0207711_100994982 541
127 3300025961 Ga0207712_10069655 Ga0207712_100696553 541
128 3300026023 Ga0207677_10028706 Ga0207677_100287063 541
129 3300026067 Ga0207678_10145770 Ga0207678_101457701 541
130 3300026075 Ga0207708_10071591 Ga0207708_100715912 541
131 3300026089 Ga0207648_10131572 Ga0207648_101315722 541
132 3300026118 Ga0207675_100006465 Ga0207675_10000646512 541
133 3300026118 Ga0207675_100059342 Ga0207675_1000593423 541
134 3300026118 Ga0207675_100101534 Ga0207675_1001015342 541
135 3300028380 Ga0268265_10084204 Ga0268265_100842042 541
136 3300048906 Ga0496103_0063469 Ga0496103_0063469_24_1649 541
137 3300048909 Ga0496106_0105806 Ga0496106_0105806_406_2031 541
138 3300048911 Ga0496108_0116849 Ga0496108_0116849_130_1755 541
139 3300048912 Ga0496109_0115038 Ga0496109_0115038_443_2068 541
140 3300048913 Ga0496110_0076790 Ga0496110_0076790_1078_2703 541
141 3300048915 Ga0496112_0047660 Ga0496112_0047660_334_1959 541
142 3300048916 Ga0496113_0067531 Ga0496113_0067531_295_1920 541

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01368

DHH

DHH family

54

434

0.94

PF07085

DRTGG

DRTGG domain

191

298

0.94

PF02833

DHHA2

DHHA2 domain

470

594

0.9

PF00571

CBS

CBS domain

120

175

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1k23-assembly2.cif.gz_D inorganic pyrophosphatase (family ii) from bacillus subtilis 0.9349 1 429
1wpn-assembly1.cif.gz_B crystal structure of the n-terminal core of bacillus subtilis inorganic pyrophosphatase 0.9311 3 419
1wpn-assembly1.cif.gz_B crystal structure of the n-terminal core of bacillus subtilis inorganic pyrophosphatase 0.902 3 419
3ghd-assembly1.cif.gz_A crystal structure of a cystathionine beta-synthase domain protein fused to a zn-ribbon-like domain 0.8851 79 123
1i74-assembly1.cif.gz_B streptococcus mutans inorganic pyrophosphatase 0.8846 2 540
ID Description Score Start End Superfamily
2hawA01 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core);inorganic pyrophosphatase (n-terminal core) 0.9299 3 423 3.90.1640.10
3l31B02 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.9295 140 242 3.40.1390.20
2hawA01 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core);inorganic pyrophosphatase (n-terminal core) 0.9155 3 423 3.90.1640.10
2eb0A02 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;DHHA2 domain 0.906 426 540 3.10.310.20
af_Q2FXM2_67_177_3.40.1390.20 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.9025 138 242 3.40.1390.20
ID Description Score Start End GO Terms
AF-A0A7Y5XV86-F1-model_v4 Putative manganese-dependent inorganic diphosphatase (EC 3.6.1.1) 0.9558 1 425 GO:0004427
GO:0005737
AF-A0A7Y5XV86-F1-model_v4 Putative manganese-dependent inorganic diphosphatase (EC 3.6.1.1) 0.9536 1 425 GO:0004427
GO:0005737
AF-A0A7C1GBX1-F1-model_v4 Manganese-dependent inorganic pyrophosphatase 0.9534 3 401 GO:0005737
AF-A0A2T4ULC3-F1-model_v4 inorganic diphosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) 0.9453 2 541 GO:0004427
GO:0005737
GO:0046872
AF-A0A838JLI9-F1-model_v4 Manganese-dependent inorganic pyrophosphatase 0.9453 424 541 GO:0005737
GO:0016462

Feature Viewer

pLDDT pTM Quality
91.2 0.79 High
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Predicted Structure (AlphaFold2)

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