F183872

General Info

Members Datasets Scaffolds Average Seq Length
141 113 282 382

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0019293|Ga0501033_0019293_1843_3144
Length 433
Sequence MTGKMACVESISGVFAGIPLRLECRSDNSTGRTDMTRADFKAQLSGTAIDPFSIAVPDVILQDLQDRLSRVRWPDEVPGGGWNFGADLTYLRGLIKYWRDTYDWRARERTLNRYPQFTTSIRGTRVHFIHECGEGNAPYPLLLSHGWPGSIVEFQQLIPRLTHPSAFGGRAEDAFTVIVPSLPGHGFSYSTGQARLGIIEIADVLADLMTGTLGYKRFAAHGHDWGAFLATRLGFAHVDRLLGIHITLLAVPREPVQAPNTPEELRFNVQLANWLREETGYSAMMGTKPQTLSYGLTDSPVGLAAWIIEKFRSWSDCGGDVDAHFSRDVLLDNIMIYWVTGAINSSFWPYYARIHGPWIVPSGEKVQVPTGYAEFPREILRPPKSVAETLYGNIQRWSSMRRGGHFPALEDPDALAQEIFSFFRPLRTSSSER

Samples

Sample ID Description Type Environment
1 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
45 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
63 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
64 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
65 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
66 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
67 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
68 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
69 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
70 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
71 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
84 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
85 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
86 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
87 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
88 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
89 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
90 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
91 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
92 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
93 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
96 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
101 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
102 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
103 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
104 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
105 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
106 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
107 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
108 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
109 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
110 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
111 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
112 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
113 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.45
Metatranscriptomes 0
Isolates 3.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.42
Nodule 2.13
Rhizoplane 1.42
Rhizosphere 87.23
Stem 0
Stem Tuber 0
Unclassified 8.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501033_0019293 3300049570 Bacteria 5154
2 JGI25407J50210_10004222 3300003373 Bacteria 3497
3 JGI25407J50210_10019447 3300003373 Bacteria 1766
4 Ga0070658_10154400 3300005327 Bacteria 1923
5 Ga0070676_10000025 3300005328 Bacteria 46204
6 Ga0070670_100073716 3300005331 Unclassified 2932
7 Ga0068869_100018412 3300005334 Bacteria 4754
8 Ga0068869_100023833 3300005334 Bacteria 4234
9 Ga0070660_100004989 3300005339 Bacteria 9175
10 Ga0070692_10006761 3300005345 Bacteria 5001
11 Ga0070668_100011914 3300005347 Bacteria 6474
12 Ga0070671_100003207 3300005355 Bacteria 12753
13 Ga0070667_100001758 3300005367 Bacteria 19311
14 Ga0070711_100024961 3300005439 Unclassified 3907
15 Ga0070708_100065661 3300005445 Bacteria 3254
16 Ga0070708_100066628 3300005445 Bacteria 3232
17 Ga0070707_100011775 3300005468 Bacteria 8164
18 Ga0070707_100216295 3300005468 Unclassified 1867
19 Ga0070698_100104801 3300005471 Bacteria 2798
20 Ga0070698_100107381 3300005471 Unclassified 2759
21 Ga0070699_100057655 3300005518 Bacteria 3364
22 Ga0070699_100278818 3300005518 Bacteria 1497
23 Ga0070684_100069342 3300005535 Bacteria 3101
24 Ga0070697_100090552 3300005536 Bacteria 2528
25 Ga0070686_100032702 3300005544 Bacteria 3190
26 Ga0070693_100228326 3300005547 Bacteria 1223
27 Ga0068855_100007062 3300005563 Bacteria 13618
28 Ga0068855_100161972 3300005563 Bacteria 2538
29 Ga0068859_100000882 3300005617 Bacteria 30613
30 Ga0068863_100007272 3300005841 Bacteria 10845
31 Ga0068858_100001142 3300005842 Bacteria 27470
32 Ga0068858_100040499 3300005842 Bacteria 4321
33 Ga0068860_100093787 3300005843 Unclassified 2861
34 Ga0068862_100313227 3300005844 Unclassified 1447
35 Ga0081455_10002053 3300005937 Bacteria 24074
36 Ga0081538_10007912 3300005981 Bacteria 9108
37 Ga0081539_10000518 3300005985 Bacteria 80382
38 Ga0075433_10033782 3300006852 Bacteria 4387
39 Ga0075434_100038438 3300006871 Bacteria 4740
40 Ga0075434_100081360 3300006871 Bacteria 3236
41 Ga0097620_100000882 3300006931 Bacteria 30613
42 Ga0075435_100017550 3300007076 Bacteria 5421
43 Ga0075435_100047379 3300007076 Bacteria 3451
44 Ga0099795_10030288 3300007788 Bacteria 1856
45 Ga0114129_10270221 3300009147 Bacteria 2275
46 Ga0114129_10278724 3300009147 Bacteria 2234
47 Ga0105248_10001940 3300009177 Bacteria 22989
48 Ga0105248_10037288 3300009177 Bacteria 5438
49 Ga0105238_10006458 3300009551 Bacteria 11658
50 Ga0105238_10134440 3300009551 Bacteria 2451
51 Ga0105249_10026536 3300009553 Bacteria 5221
52 Ga0163162_10016891 3300013306 Bacteria 7135
53 Ga0157375_10191565 3300013308 Bacteria 2199
54 Ga0163163_10003174 3300014325 Bacteria 13919
55 Ga0163163_10017876 3300014325 Bacteria 6621
56 Ga0157379_10004146 3300014968 Bacteria 12372
57 Ga0213876_10050081 3300021384 Bacteria 2207
58 Ga0213875_10011872 3300021388 Bacteria 4319
59 Ga0209673_1017910 3300025273 Bacteria 2596
60 Ga0207663_10033417 3300025916 Unclassified 3064
61 Ga0207657_10001897 3300025919 Bacteria 22591
62 Ga0207646_10041616 3300025922 Bacteria 4130
63 Ga0207646_10236204 3300025922 Unclassified 1651
64 Ga0207650_10054011 3300025925 Unclassified 2979
65 Ga0207644_10001405 3300025931 Bacteria 15519
66 Ga0207711_10088693 3300025941 Bacteria 2716
67 Ga0207711_10219776 3300025941 Unclassified 1737
68 Ga0207689_10044336 3300025942 Bacteria 3677
69 Ga0207661_10209953 3300025944 Bacteria 1716
70 Ga0207712_10045820 3300025961 Bacteria 3029
71 Ga0207668_10001903 3300025972 Bacteria 12215
72 Ga0207658_10015466 3300025986 Bacteria 5235
73 Ga0207703_10011893 3300026035 Bacteria 6776
74 Ga0207703_10017147 3300026035 Bacteria 5649
75 Ga0207708_10005493 3300026075 Bacteria 9355
76 Ga0207641_10023424 3300026088 Bacteria 5087
77 Ga0268265_10332510 3300028380 Unclassified 1380
78 Ga0268264_10164904 3300028381 Unclassified 1999
79 Ga0307515_10186804 3300028794 Bacteria 1999
80 Ga0316177_1026061 3300030731 Bacteria 7722
81 Ga0314311_1254967 3300030733 Bacteria 7729
82 Ga0265316_10044864 3300031344 Bacteria 3513
83 Ga0307509_10068527 3300031507 Bacteria 3713
84 Ga0307413_10072736 3300031824 Bacteria 2171
85 Ga0307410_10037448 3300031852 Bacteria 3169
86 Ga0326468_10000200 3300031889 Bacteria 6187
87 Ga0307407_10168948 3300031903 Bacteria 1438
88 Ga0307409_100002646 3300031995 Bacteria 9427
89 Ga0307409_100006236 3300031995 Bacteria 6983
90 Ga0307416_100026604 3300032002 Bacteria 4266
91 Ga0307416_100101077 3300032002 Bacteria 2510
92 Ga0307416_100221703 3300032002 Bacteria 1814
93 Ga0307415_100001927 3300032126 Bacteria 10211
94 Ga0307415_100024470 3300032126 Bacteria 3770
95 Ga0307415_100080963 3300032126 Bacteria 2318
96 Ga0307415_100120453 3300032126 Bacteria 1966
97 Ga0373937_0021969 3300036401 Bacteria 5730
98 Ga0395898_0008814 3300037466 Bacteria 10629
99 Ga0395898_0049462 3300037466 Bacteria 4119
100 Ga0436364_0910894 3300037853 Bacteria 26168
101 Ga0395901_0036248 3300038443 Bacteria 5097
102 Ga0395901_0120831 3300038443 Bacteria 2753
103 Ga0436365_1177264 3300039437 Bacteria 11796
104 Ga0439463_002571 3300042016 Bacteria 4604
105 Ga0451577_0085679 3300042876 Bacteria 2811
106 Ga0466965_0006254 3300044683 Bacteria 5391
107 Ga0466967_0310733 3300045976 Bacteria 1518
108 Ga0495650_0026201 3300046471 Bacteria 2717
109 Ga0495606_0016027 3300046507 Bacteria 5739
110 Ga0495631_0017414 3300046518 Bacteria 3401
111 Ga0495643_0016463 3300046522 Bacteria 4342
112 Ga0495654_0019764 3300046530 Bacteria 3518
113 Ga0495597_0061773 3300046542 Bacteria 1631
114 Ga0495668_0017002 3300046616 Bacteria 4224
115 Ga0495671_0005984 3300046692 Bacteria 7071
116 Ga0496112_0089049 3300048915 Bacteria 3054
117 Ga0496117_0005703 3300048920 Bacteria 12959
118 Ga0496118_0007958 3300048921 Bacteria 11085
119 Ga0496126_0000398 3300048929 Bacteria 89253
120 Ga0496126_0075279 3300048929 Bacteria 2996
121 Ga0495678_000852 3300049459 Bacteria 27240
122 Ga0495682_0000100 3300049460 Bacteria 76271
123 Ga0501034_0012501 3300049571 Bacteria 8764
124 Ga0501042_0022065 3300049578 Bacteria 4444
125 Ga0501046_0023361 3300049580 Bacteria 5088
126 Ga0501072_0094120 3300049588 Bacteria 2380
127 Ga0501225_0002941 3300049705 Bacteria 5220
128 Ga0501081_0032216 3300049743 Bacteria 3555
129 Ga0501035_0125491 3300049822 Bacteria 2241
130 nmdc:mga0n895_9140_c1 3300050512 Bacteria 8653
131 nmdc:mga0rr50_10699_c1 3300050513 Bacteria 5841
132 nmdc:mga0a205_139082_c1 3300050515 Bacteria 2329
133 nmdc:mga0a205_6201_c1 3300050515 Bacteria 10793
134 Ga0500636_0015878 3300053177 Bacteria 4436
135 Ga0530510_0024313 3300061734 Bacteria 4321
136 Ga0530510_0176559 3300061734 Bacteria 1583
137 2644238456 2643221643 Bacteria 5749658
138 2671113109 2667528174 Bacteria 6435400
139 2838031627 2838029111 Bacteria 6603031
140 2842478359 2842475841 Bacteria 6603183
141 2842505695 2842502639 Bacteria 6604161
142 Ga0501033_0019293
143 JGI25407J50210_10004222
144 JGI25407J50210_10019447
145 Ga0070658_10154400
146 Ga0070676_10000025
147 Ga0070670_100073716
148 Ga0068869_100018412
149 Ga0068869_100023833
150 Ga0070660_100004989
151 Ga0070692_10006761
152 Ga0070668_100011914
153 Ga0070671_100003207
154 Ga0070667_100001758
155 Ga0070711_100024961
156 Ga0070708_100065661
157 Ga0070708_100066628
158 Ga0070707_100011775
159 Ga0070707_100216295
160 Ga0070698_100104801
161 Ga0070698_100107381
162 Ga0070699_100057655
163 Ga0070699_100278818
164 Ga0070684_100069342
165 Ga0070697_100090552
166 Ga0070686_100032702
167 Ga0070693_100228326
168 Ga0068855_100007062
169 Ga0068855_100161972
170 Ga0068859_100000882
171 Ga0068863_100007272
172 Ga0068858_100001142
173 Ga0068858_100040499
174 Ga0068860_100093787
175 Ga0068862_100313227
176 Ga0081455_10002053
177 Ga0081538_10007912
178 Ga0081539_10000518
179 Ga0075433_10033782
180 Ga0075434_100038438
181 Ga0075434_100081360
182 Ga0097620_100000882
183 Ga0075435_100017550
184 Ga0075435_100047379
185 Ga0099795_10030288
186 Ga0114129_10270221
187 Ga0114129_10278724
188 Ga0105248_10001940
189 Ga0105248_10037288
190 Ga0105238_10006458
191 Ga0105238_10134440
192 Ga0105249_10026536
193 Ga0163162_10016891
194 Ga0157375_10191565
195 Ga0163163_10003174
196 Ga0163163_10017876
197 Ga0157379_10004146
198 Ga0213876_10050081
199 Ga0213875_10011872
200 Ga0209673_1017910
201 Ga0207663_10033417
202 Ga0207657_10001897
203 Ga0207646_10041616
204 Ga0207646_10236204
205 Ga0207650_10054011
206 Ga0207644_10001405
207 Ga0207711_10088693
208 Ga0207711_10219776
209 Ga0207689_10044336
210 Ga0207661_10209953
211 Ga0207712_10045820
212 Ga0207668_10001903
213 Ga0207658_10015466
214 Ga0207703_10011893
215 Ga0207703_10017147
216 Ga0207708_10005493
217 Ga0207641_10023424
218 Ga0268265_10332510
219 Ga0268264_10164904
220 Ga0307515_10186804
221 Ga0316177_1026061
222 Ga0314311_1254967
223 Ga0265316_10044864
224 Ga0307509_10068527
225 Ga0307413_10072736
226 Ga0307410_10037448
227 Ga0326468_10000200
228 Ga0307407_10168948
229 Ga0307409_100002646
230 Ga0307409_100006236
231 Ga0307416_100026604
232 Ga0307416_100101077
233 Ga0307416_100221703
234 Ga0307415_100001927
235 Ga0307415_100024470
236 Ga0307415_100080963
237 Ga0307415_100120453
238 Ga0373937_0021969
239 Ga0395898_0008814
240 Ga0395898_0049462
241 Ga0436364_0910894
242 Ga0395901_0036248
243 Ga0395901_0120831
244 Ga0436365_1177264
245 Ga0439463_002571
246 Ga0451577_0085679
247 Ga0466965_0006254
248 Ga0466967_0310733
249 Ga0495650_0026201
250 Ga0495606_0016027
251 Ga0495631_0017414
252 Ga0495643_0016463
253 Ga0495654_0019764
254 Ga0495597_0061773
255 Ga0495668_0017002
256 Ga0495671_0005984
257 Ga0496112_0089049
258 Ga0496117_0005703
259 Ga0496118_0007958
260 Ga0496126_0000398
261 Ga0496126_0075279
262 Ga0495678_000852
263 Ga0495682_0000100
264 Ga0501034_0012501
265 Ga0501042_0022065
266 Ga0501046_0023361
267 Ga0501072_0094120
268 Ga0501225_0002941
269 Ga0501081_0032216
270 Ga0501035_0125491
271 nmdc:mga0n895_9140_c1
272 nmdc:mga0rr50_10699_c1
273 nmdc:mga0a205_139082_c1
274 nmdc:mga0a205_6201_c1
275 Ga0500636_0015878
276 Ga0530510_0024313
277 Ga0530510_0176559
278 2644238456
279 2671113109
280 2838031627
281 2842478359
282 2842505695

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06441

EHN

Epoxide hydrolase N terminus

49

154

0.95

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

139

303

0.84

PF12697

Abhydrolase_6

Alpha/beta hydrolase family

141

418

0.49

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qa9-assembly1.cif.gz_A ensemble refinement of an epoxide hydrolase from streptomyces carzinostaticus subsp. neocarzinostaticus. 0.8734 44 431
5f4z-assembly3.cif.gz_E the crystal structure of an epoxide hydrolase from streptomyces carzinostaticus subsp. neocarzinostaticus 0.8723 46 432
5ie6-assembly2.cif.gz_C-2 crystal structure of a lactonase mutant in complex with substrate b 0.8701 190 231
5f4z-assembly3.cif.gz_E the crystal structure of an epoxide hydrolase from streptomyces carzinostaticus subsp. neocarzinostaticus 0.8615 46 432
4qa9-assembly1.cif.gz_A ensemble refinement of an epoxide hydrolase from streptomyces carzinostaticus subsp. neocarzinostaticus. 0.8604 44 431
ID Description Score Start End Superfamily
4qa9A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8734 44 431 3.40.50.1820
af_Q9D379_48_454_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8647 47 431 3.40.50.1820
4qa9A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8604 44 431 3.40.50.1820
4qlaB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8432 44 432 3.40.50.1820
af_Q7JRC3_35_470_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8319 45 431 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A2E9FCC5-F1-model_v4 Epoxide hydrolase N-terminal domain-containing protein 0.9601 41 126 GO:0004301
GO:0009056
GO:0097176
AF-A0A382THQ8-F1-model_v4 Epoxide hydrolase N-terminal domain-containing protein 0.9443 45 233 GO:0004301
GO:0009056
GO:0097176
AF-A0A7W8CBI6-F1-model_v4 Epoxide hydrolase N-terminal domain-containing protein 0.9436 45 173 GO:0004301
GO:0009056
GO:0097176
AF-A0A7X3R243-F1-model_v4 Epoxide hydrolase 0.9429 43 215 GO:0004301
GO:0009056
GO:0097176
AF-A0A1I1S4L0-F1-model_v4 Pimeloyl-ACP methyl ester carboxylesterase 0.9409 43 337 GO:0004301
GO:0009056
GO:0097176

Map