F183799

General Info

Members Datasets Scaffolds Average Seq Length
141 104 141 255

Family's Representative Sequence

Representative Sequence 3300048918|Ga0496115_0000407|Ga0496115_0000407_25574_26443
Length 281
Sequence LGLDFSVAVAMATNVQQADTHTRDAGATARLAELIREARSVVALTGAGISVPSGIPDFRTPRSGLWERVNPMEVAHIDAFREDSVRFWSFYGERFASLHDKQPNGAHRALVGLEERGLLDGVVTQNIDMLHRRAGTRELVEVHGSIASCSCLRCAGEDGVELAEVRARLAADAEGVPRCAECAGPLKPDVVLFGELLPAPVLQRARELCERADVLLCVGSSLEVHPVAGLPLLTHEAGGAVAILTQGPTPLDEIAEVRLRGDVVAELQGLLAALSPEARRP

Samples

Sample ID Description Type Environment
1 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
2 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
3 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
4 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
5 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
6 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
7 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
8 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
9 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
10 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
11 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
12 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
13 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
14 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
15 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
16 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
17 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
18 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
19 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
28 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
29 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
30 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
31 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
32 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
33 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
34 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
35 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
36 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
37 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
38 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
39 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
40 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
41 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
42 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
43 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
44 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
45 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
46 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
47 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
48 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
49 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
50 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
51 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
52 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
53 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
54 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
55 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
56 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
57 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
58 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
59 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
60 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
61 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
62 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
65 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
66 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
67 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
68 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
69 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
70 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
71 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
72 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
73 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
74 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
75 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
76 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
77 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
78 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
79 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
80 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
81 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
82 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
83 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
84 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
85 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
86 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
87 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
88 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
89 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
90 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
91 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
92 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
97 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
98 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
99 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
100 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
101 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
102 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
103 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
104 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.13
Nodule 0
Rhizoplane 7.09
Rhizosphere 85.11
Stem 0
Stem Tuber 0
Unclassified 5.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100202829 3300005338 Bacteria 1654
2 Ga0070714_100026532 3300005435 Bacteria 4789
3 Ga0070713_100060886 3300005436 Bacteria 3157
4 Ga0070711_100001936 3300005439 Bacteria 11598
5 Ga0070711_100079313 3300005439 Bacteria 2335
6 Ga0070684_100427021 3300005535 Bacteria 1224
7 Ga0081455_10088466 3300005937 Bacteria 2516
8 Ga0070717_10006026 3300006028 Bacteria 8884
9 Ga0070717_10544202 3300006028 Bacteria 1051
10 Ga0075365_10170697 3300006038 Unclassified 1518
11 Ga0075434_100388342 3300006871 Unclassified 1417
12 Ga0105240_10419871 3300009093 Bacteria 1503
13 Ga0111539_10597887 3300009094 Unclassified 1285
14 Ga0105245_10150968 3300009098 Bacteria 2197
15 Ga0105237_10004786 3300009545 Bacteria 15561
16 Ga0105239_10169940 3300010375 Unclassified 2437
17 Ga0157379_10104698 3300014968 Bacteria 2540
18 Ga0213874_10012034 3300021377 Bacteria 2210
19 Ga0213876_10010775 3300021384 Bacteria 4898
20 Ga0213875_10006540 3300021388 Bacteria 6101
21 Ga0213875_10057570 3300021388 Bacteria 1821
22 Ga0207695_10469744 3300025913 Bacteria 1140
23 Ga0207671_10001450 3300025914 Bacteria 27381
24 Ga0207663_10000710 3300025916 Bacteria 14822
25 Ga0207663_10157077 3300025916 Bacteria 1601
26 Ga0207646_10396923 3300025922 Unclassified 1246
27 Ga0207700_10027882 3300025928 Bacteria 3960
28 Ga0207700_10421659 3300025928 Bacteria 1172
29 Ga0207664_10004228 3300025929 Bacteria 9703
30 Ga0207664_10063723 3300025929 Bacteria 2947
31 Ga0207668_10408297 3300025972 Bacteria 1150
32 Ga0268264_10079233 3300028381 Bacteria 2802
33 Ga0265326_10009378 3300028558 Bacteria 2927
34 Ga0265319_1000611 3300028563 Bacteria 23654
35 Ga0265334_10040650 3300028573 Bacteria 1820
36 Ga0265318_10000593 3300028577 Bacteria 25348
37 Ga0265318_10118735 3300028577 Bacteria 972
38 Ga0265322_10007606 3300028654 Bacteria 3158
39 Ga0265336_10000001 3300028666 Bacteria 916179
40 Ga0265338_10000046 3300028800 Bacteria 223068
41 Ga0265324_10001889 3300029957 Bacteria 11289
42 Ga0265332_10084829 3300031238 Bacteria 1342
43 Ga0265320_10123135 3300031240 Bacteria 1181
44 Ga0265340_10000005 3300031247 Bacteria 204570
45 Ga0265316_10011407 3300031344 Bacteria 8019
46 Ga0265342_10017734 3300031712 Bacteria 4624
47 Ga0307407_10154329 3300031903 Bacteria 1496
48 Ga0307409_100439709 3300031995 Bacteria 1256
49 Ga0307416_100067047 3300032002 Unclassified 2958
50 Ga0307415_100315471 3300032126 Bacteria 1301
51 Ga0373947_0525588 3300035725 Bacteria 805
52 Ga0373925_0272802 3300037068 Bacteria 1361
53 Ga0395900_0309571 3300037418 Unclassified 1563
54 Ga0395898_0211608 3300037466 Bacteria 1849
55 Ga0436364_1102146 3300037853 Bacteria 2784
56 Ga0395901_0168709 3300038443 Unclassified 2297
57 Ga0395901_0308511 3300038443 Bacteria 1639
58 Ga0436365_0108210 3300039437 Bacteria 5612
59 Ga0436365_0683509 3300039437 Bacteria 18452
60 Ga0436362_1064948 3300039453 Unclassified 1935
61 Ga0466965_0052561 3300044683 Bacteria 2024
62 Ga0466966_0047149 3300044684 Bacteria 2749
63 Ga0466966_0064346 3300044684 Bacteria 2309
64 Ga0466961_0013546 3300044693 Bacteria 5222
65 Ga0466961_0018062 3300044693 Bacteria 4535
66 Ga0466961_0024070 3300044693 Bacteria 3918
67 Ga0466963_0004864 3300044694 Bacteria 7826
68 Ga0466963_0011845 3300044694 Bacteria 5322
69 Ga0466963_0059335 3300044694 Bacteria 2553
70 Ga0466964_0077897 3300044706 Bacteria 1416
71 Ga0466971_0004303 3300044719 Bacteria 6137
72 Ga0466968_0217337 3300044735 Bacteria 899
73 Ga0466970_0063709 3300044765 Bacteria 1976
74 Ga0466970_0089685 3300044765 Unclassified 1668
75 Ga0466970_0292760 3300044765 Bacteria 917
76 Ga0466957_0283824 3300044842 Bacteria 1109
77 Ga0466957_0301630 3300044842 Bacteria 1076
78 Ga0466959_0011711 3300045049 Bacteria 6309
79 Ga0466959_0020466 3300045049 Bacteria 4875
80 Ga0466959_0074478 3300045049 Bacteria 2455
81 Ga0466959_0102936 3300045049 Bacteria 2043
82 Ga0466959_0280640 3300045049 Bacteria 1143
83 Ga0466958_0001434 3300045836 Bacteria 11297
84 Ga0466958_0034852 3300045836 Bacteria 3004
85 Ga0466958_0288248 3300045836 Unclassified 1053
86 Ga0466958_0346629 3300045836 Bacteria 956
87 Ga0466967_0239591 3300045976 Unclassified 1730
88 Ga0466967_0356773 3300045976 Bacteria 1416
89 Ga0466967_0530979 3300045976 Bacteria 1157
90 Ga0495641_0002988 3300046461 Bacteria 12982
91 Ga0495653_0038578 3300046463 Bacteria 3749
92 Ga0495594_0164360 3300046499 Bacteria 1262
93 Ga0495608_0208806 3300046511 Unclassified 1228
94 Ga0495618_0000121 3300046514 Bacteria 57296
95 Ga0495618_0100996 3300046514 Unclassified 1847
96 Ga0495630_0005191 3300046517 Bacteria 9177
97 Ga0495637_0058163 3300046520 Bacteria 1594
98 Ga0495644_0003592 3300046523 Bacteria 6112
99 Ga0495652_0031191 3300046529 Unclassified 4669
100 Ga0495665_0052558 3300046531 Bacteria 2157
101 Ga0495640_0033897 3300046533 Bacteria 3626
102 Ga0495640_0123657 3300046533 Unclassified 1680
103 Ga0495587_0206803 3300046536 Unclassified 1109
104 Ga0495598_0064664 3300046537 Bacteria 1137
105 Ga0495645_0000076 3300046543 Bacteria 67987
106 Ga0495656_0009957 3300046615 Bacteria 3440
107 Ga0495588_0065649 3300046674 Bacteria 1883
108 Ga0495657_0000011 3300046675 Bacteria 207360
109 Ga0495599_0036976 3300046678 Unclassified 3067
110 Ga0495658_0113949 3300046683 Bacteria 1628
111 Ga0495581_0203187 3300047315 Unclassified 1159
112 Ga0495604_0174966 3300047317 Unclassified 1506
113 Ga0495676_0080917 3300047321 Bacteria 2464
114 Ga0495673_0005598 3300047469 Bacteria 7560
115 Ga0495681_0016175 3300047470 Bacteria 4196
116 Ga0495684_0010063 3300047471 Bacteria 7309
117 Ga0495684_0034233 3300047471 Bacteria 3898
118 Ga0495686_0000008 3300047472 Bacteria 727479
119 Ga0495686_0029160 3300047472 Bacteria 3591
120 Ga0495686_0206178 3300047472 Bacteria 1126
121 Ga0496103_0152596 3300048906 Unclassified 1480
122 Ga0496103_0591230 3300048906 Bacteria 707
123 Ga0496107_0217459 3300048910 Unclassified 1421
124 Ga0496108_0038424 3300048911 Unclassified 3988
125 Ga0496108_0325138 3300048911 Bacteria 1341
126 Ga0496110_0072899 3300048913 Unclassified 3047
127 Ga0496111_0001779 3300048914 Bacteria 12632
128 Ga0496114_0064088 3300048917 Unclassified 3077
129 Ga0496115_0000407 3300048918 Bacteria 35449
130 Ga0496115_0000420 3300048918 Bacteria 34633
131 Ga0496124_0186750 3300048927 Bacteria 1590
132 nmdc:mga0yw44_350788_c1 3300050492 Unclassified 993
133 Ga0495601_0012713 3300053077 Bacteria 5050
134 Ga0495601_0032854 3300053077 Unclassified 3232
135 Ga0495612_0000715 3300053078 Bacteria 13466
136 Ga0495612_0050607 3300053078 Unclassified 1706
137 Ga0495619_0070084 3300053085 Unclassified 2344
138 Ga0495619_0255233 3300053085 Bacteria 1215
139 Ga0500628_003294 3300053129 Bacteria 2661
140 Ga0466962_0006417 3300061719 Bacteria 5645
141 Ga0530510_0518986 3300061734 Bacteria 904

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006871 Ga0075434_100388342 Ga0075434_1003883423 187
2 3300048906 Ga0496103_0591230 Ga0496103_0591230_15_617 199
3 3300048910 Ga0496107_0217459 Ga0496107_0217459_528_1214 220
4 3300050492 nmdc:mga0yw44_350788_c1 nmdc:mga0yw44_350788_c1_308_976 220
5 3300014968 Ga0157379_10104698 Ga0157379_101046982 222
6 3300025972 Ga0207668_10408297 Ga0207668_104082972 222
7 3300035725 Ga0373947_0525588 Ga0373947_0525588_18_707 222
8 3300046499 Ga0495594_0164360 Ga0495594_0164360_14_712 225
9 3300028381 Ga0268264_10079233 Ga0268264_100792332 228
10 3300045976 Ga0466967_0356773 Ga0466967_0356773_169_864 229
11 3300006038 Ga0075365_10170697 Ga0075365_101706972 234
12 3300044765 Ga0466970_0089685 Ga0466970_0089685_866_1612 235
13 3300037466 Ga0395898_0211608 Ga0395898_0211608_355_1074 237
14 3300045976 Ga0466967_0239591 Ga0466967_0239591_117_836 237
15 3300047315 Ga0495581_0203187 Ga0495581_0203187_401_1135 237
16 3300048911 Ga0496108_0325138 Ga0496108_0325138_493_1215 237
17 3300005439 Ga0070711_100001936 Ga0070711_1000019366 240
18 3300025916 Ga0207663_10000710 Ga0207663_100007103 240
19 3300031995 Ga0307409_100439709 Ga0307409_1004397092 240
20 3300032002 Ga0307416_100067047 Ga0307416_1000670472 240
21 3300032126 Ga0307415_100315471 Ga0307415_1003154712 240
22 3300061734 Ga0530510_0518986 Ga0530510_0518986_118_843 240
23 3300005535 Ga0070684_100427021 Ga0070684_1004270211 241
24 3300009094 Ga0111539_10597887 Ga0111539_105978872 241
25 3300010375 Ga0105239_10169940 Ga0105239_101699401 241
26 3300037418 Ga0395900_0309571 Ga0395900_0309571_55_786 241
27 3300038443 Ga0395901_0168709 Ga0395901_0168709_557_1288 241
28 3300048906 Ga0496103_0152596 Ga0496103_0152596_253_1002 241
29 3300048911 Ga0496108_0038424 Ga0496108_0038424_814_1563 241
30 3300048913 Ga0496110_0072899 Ga0496110_0072899_1179_1928 241
31 3300048914 Ga0496111_0001779 Ga0496111_0001779_5331_6080 241
32 3300048917 Ga0496114_0064088 Ga0496114_0064088_1996_2745 241
33 3300048927 Ga0496124_0186750 Ga0496124_0186750_720_1451 241
34 3300038443 Ga0395901_0308511 Ga0395901_0308511_867_1601 242
35 3300046514 Ga0495618_0100996 Ga0495618_0100996_359_1111 242
36 3300046529 Ga0495652_0031191 Ga0495652_0031191_2078_2830 242
37 3300047317 Ga0495604_0174966 Ga0495604_0174966_305_1057 242
38 3300053077 Ga0495601_0032854 Ga0495601_0032854_2470_3222 242
39 3300053078 Ga0495612_0050607 Ga0495612_0050607_37_789 242
40 3300053085 Ga0495619_0070084 Ga0495619_0070084_305_1057 242
41 3300053085 Ga0495619_0255233 Ga0495619_0255233_68_820 242
42 3300005435 Ga0070714_100026532 Ga0070714_1000265323 244
43 3300005436 Ga0070713_100060886 Ga0070713_1000608863 244
44 3300006028 Ga0070717_10006026 Ga0070717_100060266 244
45 3300006028 Ga0070717_10544202 Ga0070717_105442021 244
46 3300025928 Ga0207700_10027882 Ga0207700_100278823 244
47 3300025929 Ga0207664_10004228 Ga0207664_100042285 244
48 3300025929 Ga0207664_10063723 Ga0207664_100637234 244
49 3300044694 Ga0466963_0059335 Ga0466963_0059335_61_834 244
50 3300045049 Ga0466959_0020466 Ga0466959_0020466_4057_4830 244
51 3300021377 Ga0213874_10012034 Ga0213874_100120343 245
52 3300044684 Ga0466966_0047149 Ga0466966_0047149_466_1239 245
53 3300044693 Ga0466961_0024070 Ga0466961_0024070_887_1660 245
54 3300045049 Ga0466959_0011711 Ga0466959_0011711_2197_2970 245
55 3300045836 Ga0466958_0034852 Ga0466958_0034852_1623_2396 245
56 3300005937 Ga0081455_10088466 Ga0081455_100884663 246
57 3300037853 Ga0436364_1102146 Ga0436364_1102146_1491_2297 246
58 3300044684 Ga0466966_0064346 Ga0466966_0064346_1425_2201 246
59 3300045049 Ga0466959_0102936 Ga0466959_0102936_231_1007 246
60 3300028563 Ga0265319_1000611 Ga0265319_10006117 247
61 3300028577 Ga0265318_10000593 Ga0265318_1000059319 247
62 3300028666 Ga0265336_10000001 Ga0265336_10000001144 247
63 3300028800 Ga0265338_10000046 Ga0265338_1000004633 247
64 3300029957 Ga0265324_10001889 Ga0265324_100018897 247
65 3300031247 Ga0265340_10000005 Ga0265340_10000005144 247
66 3300031712 Ga0265342_10017734 Ga0265342_100177343 247
67 3300031903 Ga0307407_10154329 Ga0307407_101543292 247
68 3300045836 Ga0466958_0288248 Ga0466958_0288248_97_873 247
69 3300046461 Ga0495641_0002988 Ga0495641_0002988_7746_8516 247
70 3300046520 Ga0495637_0058163 Ga0495637_0058163_229_1005 247
71 3300046523 Ga0495644_0003592 Ga0495644_0003592_4797_5573 247
72 3300046537 Ga0495598_0064664 Ga0495598_0064664_174_950 247
73 3300046615 Ga0495656_0009957 Ga0495656_0009957_1815_2591 247
74 3300046683 Ga0495658_0113949 Ga0495658_0113949_275_1045 247
75 3300047469 Ga0495673_0005598 Ga0495673_0005598_1463_2239 247
76 3300047470 Ga0495681_0016175 Ga0495681_0016175_2985_3761 247
77 3300047472 Ga0495686_0000008 Ga0495686_0000008_522739_523506 247
78 3300047472 Ga0495686_0029160 Ga0495686_0029160_2008_2784 247
79 3300047472 Ga0495686_0206178 Ga0495686_0206178_172_948 247
80 3300053129 Ga0500628_003294 Ga0500628_003294_73_849 247
81 3300044765 Ga0466970_0063709 Ga0466970_0063709_735_1487 248
82 3300021384 Ga0213876_10010775 Ga0213876_100107753 249
83 3300021388 Ga0213875_10006540 Ga0213875_100065403 249
84 3300025928 Ga0207700_10421659 Ga0207700_104216592 249
85 3300039437 Ga0436365_0683509 Ga0436365_0683509_13459_14262 249
86 3300044683 Ga0466965_0052561 Ga0466965_0052561_14_778 249
87 3300044693 Ga0466961_0013546 Ga0466961_0013546_3382_4146 249
88 3300044694 Ga0466963_0004864 Ga0466963_0004864_6542_7303 249
89 3300044694 Ga0466963_0011845 Ga0466963_0011845_1524_2288 249
90 3300044706 Ga0466964_0077897 Ga0466964_0077897_272_1036 249
91 3300044719 Ga0466971_0004303 Ga0466971_0004303_3901_4665 249
92 3300044735 Ga0466968_0217337 Ga0466968_0217337_105_872 249
93 3300044842 Ga0466957_0301630 Ga0466957_0301630_126_890 249
94 3300045049 Ga0466959_0280640 Ga0466959_0280640_69_827 249
95 3300045836 Ga0466958_0001434 Ga0466958_0001434_4001_4765 249
96 3300045976 Ga0466967_0530979 Ga0466967_0530979_137_922 249
97 3300046511 Ga0495608_0208806 Ga0495608_0208806_377_1174 249
98 3300046533 Ga0495640_0123657 Ga0495640_0123657_397_1194 249
99 3300046536 Ga0495587_0206803 Ga0495587_0206803_279_1076 249
100 3300046678 Ga0495599_0036976 Ga0495599_0036976_853_1650 249
101 3300061719 Ga0466962_0006417 Ga0466962_0006417_1827_2591 249
102 3300044693 Ga0466961_0018062 Ga0466961_0018062_3342_4112 250
103 3300045049 Ga0466959_0074478 Ga0466959_0074478_720_1490 250
104 3300045836 Ga0466958_0346629 Ga0466958_0346629_110_880 250
105 3300046463 Ga0495653_0038578 Ga0495653_0038578_2265_3065 250
106 3300021388 Ga0213875_10057570 Ga0213875_100575702 251
107 3300039437 Ga0436365_0108210 Ga0436365_0108210_1616_2398 251
108 3300039453 Ga0436362_1064948 Ga0436362_1064948_254_1036 251
109 3300044765 Ga0466970_0292760 Ga0466970_0292760_113_877 251
110 3300005338 Ga0068868_100202829 Ga0068868_1002028292 252
111 3300005439 Ga0070711_100079313 Ga0070711_1000793132 252
112 3300009093 Ga0105240_10419871 Ga0105240_104198712 252
113 3300009098 Ga0105245_10150968 Ga0105245_101509682 252
114 3300009545 Ga0105237_10004786 Ga0105237_100047866 252
115 3300025913 Ga0207695_10469744 Ga0207695_104697442 252
116 3300025914 Ga0207671_10001450 Ga0207671_1000145010 252
117 3300025916 Ga0207663_10157077 Ga0207663_101570772 252
118 3300025922 Ga0207646_10396923 Ga0207646_103969232 252
119 3300028558 Ga0265326_10009378 Ga0265326_100093782 252
120 3300028573 Ga0265334_10040650 Ga0265334_100406502 252
121 3300028577 Ga0265318_10118735 Ga0265318_101187351 252
122 3300028654 Ga0265322_10007606 Ga0265322_100076062 252
123 3300031238 Ga0265332_10084829 Ga0265332_100848291 252
124 3300031240 Ga0265320_10123135 Ga0265320_101231352 252
125 3300031344 Ga0265316_10011407 Ga0265316_100114077 252
126 3300037068 Ga0373925_0272802 Ga0373925_0272802_53_832 252
127 3300044842 Ga0466957_0283824 Ga0466957_0283824_237_1091 252
128 3300046514 Ga0495618_0000121 Ga0495618_0000121_54234_55049 252
129 3300046517 Ga0495630_0005191 Ga0495630_0005191_5720_6538 252
130 3300046531 Ga0495665_0052558 Ga0495665_0052558_1224_2003 252
131 3300046533 Ga0495640_0033897 Ga0495640_0033897_1630_2394 252
132 3300046543 Ga0495645_0000076 Ga0495645_0000076_64954_65769 252
133 3300046674 Ga0495588_0065649 Ga0495588_0065649_716_1495 252
134 3300046675 Ga0495657_0000011 Ga0495657_0000011_50996_51814 252
135 3300047321 Ga0495676_0080917 Ga0495676_0080917_885_1664 252
136 3300047471 Ga0495684_0010063 Ga0495684_0010063_3241_4065 252
137 3300047471 Ga0495684_0034233 Ga0495684_0034233_825_1643 252
138 3300048918 Ga0496115_0000407 Ga0496115_0000407_25574_26443 252
139 3300048918 Ga0496115_0000420 Ga0496115_0000420_8922_9725 252
140 3300053077 Ga0495601_0012713 Ga0495601_0012713_2494_3504 252
141 3300053078 Ga0495612_0000715 Ga0495612_0000715_2268_3251 252

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02146

SIR2

Sir2 family

46

226

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2h2f-assembly1.cif.gz_A the structural basis for sirtuin substrate affinity 0.9726 12 250
3d4b-assembly1.cif.gz_A crystal structure of sir2tm in complex with acetyl p53 peptide and dadme-nad+ 0.9706 10 250
2h4j-assembly1.cif.gz_A sir2-deacetylated peptide (from enzymatic turnover in crystal) 0.9673 12 250
3jr3-assembly1.cif.gz_A sir2 bound to acetylated peptide 0.9668 12 250
1yc5-assembly1.cif.gz_A sir2-p53 peptide-nicotinamide 0.9647 12 250
ID Description Score Start End Superfamily
4buzA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9773 12 250 3.40.50.1220
1ma3A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9735 8 251 3.40.50.1220
1iciA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9299 12 251 3.40.50.1220
3jwpA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9185 10 251 3.40.50.1220
4buzA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9134 12 250 3.40.50.1220
ID Description Score Start End GO Terms
AF-A0A7J9YV51-F1-model_v4 MFS transporter 0.9878 12 198 GO:0016020
GO:0016740
GO:0022857
GO:0046872
GO:0070403
AF-A0A7C6IVX7-F1-model_v4 NAD-dependent deacetylase 0.9857 12 124 GO:0017136
GO:0070403
AF-A0A6J4RZP1-F1-model_v4 protein acetyllysine N-acetyltransferase (EC 2.3.1.286) 0.9825 7 252 GO:0017136
GO:0046872
GO:0070403
AF-G7VFI2-F1-model_v4 NAD-dependent deacetylase 0.9793 51 250 GO:0017136
GO:0046872
GO:0070403
AF-A0A523B7G3-F1-model_v4 NAD-dependent protein deacetylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog) 0.9767 17 250 GO:0005737
GO:0008270
GO:0032041
GO:0046969
GO:0046970
GO:0070403
GO:0097372
GO:0140765
GO:0141222

Feature Viewer

pLDDT pTM Quality
93.33 0.91 High
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Predicted Structure (AlphaFold2)

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