F182825

General Info

Members Datasets Scaffolds Average Seq Length
141 102 116 166

Family's Representative Sequence

Representative Sequence 3300025925|Ga0207650_10262611|Ga0207650_102626112
Length 194
Sequence VTDTPIAEVEAMPDGARLHIPIPLRWGDLDAFNHVNNTSMLKLLEESRVRAFWLPDPGETAPPTAVLESSLHSGVLTLIARQEIEYLAPVPYQRHPLDVQMWFGKLGGSSIEVCYEVCSPRETAGEHGRQTIYARGCNPFALGWGRAEIPYPRKKRQYMGIMDSIKGMFGGGNKAKTKDGIDKAADAVGSKLPD

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
3 2643221553 Microbacterium sp. Root553 Isolate Unclassified
4 2643221566 Microbacterium sp. Root166 Isolate Unclassified
5 2643221575 Microbacterium sp. Root61 Isolate Unclassified
6 2643221597 Microbacterium sp. Root180 Isolate Unclassified
7 2643221630 Microbacterium sp. Root322 Isolate Unclassified
8 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
9 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
10 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
11 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
12 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
13 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
14 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
15 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
16 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
17 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
18 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
19 2919395869 Microbacterium resistens 2980 Isolate Unclassified
20 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
21 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
22 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
23 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
24 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
25 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
26 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
44 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
51 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
54 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
55 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
56 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
57 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
58 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
59 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
60 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
61 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
62 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
63 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
64 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
65 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
66 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
67 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
68 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
69 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
70 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
71 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
72 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
73 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
74 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
75 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
76 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
77 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
78 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
79 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
80 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
81 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
82 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
83 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
84 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
85 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
86 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
87 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
88 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
89 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
90 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
91 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
92 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
93 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
96 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
97 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
98 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
99 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
100 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
101 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
102 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.27
Metatranscriptomes 0
Isolates 17.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.31
Nodule 0
Rhizoplane 14.18
Rhizosphere 39.01
Stem 0
Stem Tuber 0
Unclassified 30.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10003347 3300001979 Bacteria 7063
2 JGI25154J39366_1002642 3300002738 Bacteria 4415
3 Ga0070674_100456410 3300005356 Bacteria 1056
4 Ga0070679_100688780 3300005530 Bacteria 965
5 Ga0068853_100047409 3300005539 Bacteria 3687
6 Ga0068855_100472444 3300005563 Bacteria 1366
7 Ga0075365_10001882 3300006038 Bacteria 9880
8 Ga0075365_10012270 3300006038 Bacteria 5080
9 Ga0075365_11174093 3300006038 Bacteria 540
10 Ga0075368_10042487 3300006042 Bacteria 1789
11 Ga0075363_100323738 3300006048 Bacteria 897
12 Ga0075364_10011523 3300006051 Bacteria 5374
13 Ga0075364_10029372 3300006051 Bacteria 3525
14 Ga0075364_10096128 3300006051 Bacteria 1970
15 Ga0075364_10297951 3300006051 Bacteria 1098
16 Ga0075367_10010759 3300006178 Bacteria 4818
17 Ga0075369_10029021 3300006186 Bacteria 2322
18 Ga0075369_10097188 3300006186 Bacteria 1319
19 Ga0105243_10440324 3300009148 Bacteria 1220
20 Ga0157371_10056707 3300013102 Bacteria 2779
21 Ga0157370_10449657 3300013104 Bacteria 1184
22 Ga0157369_10536928 3300013105 Bacteria 1209
23 Ga0163162_10169805 3300013306 Bacteria 2306
24 Ga0163162_11649866 3300013306 Bacteria 732
25 Ga0157372_10903066 3300013307 Bacteria 1025
26 Ga0157380_11951324 3300014326 Bacteria 648
27 Ga0209646_1000099 3300025246 Bacteria 180436
28 Ga0207655_1007830 3300025728 Bacteria 6877
29 Ga0207647_10025653 3300025904 Bacteria 3868
30 Ga0207652_10382765 3300025921 Bacteria 1270
31 Ga0207650_10262611 3300025925 Bacteria 1401
32 Ga0207690_10339819 3300025932 Bacteria 1185
33 Ga0207709_10285881 3300025935 Bacteria 1220
34 Ga0209813_10028037 3300027866 Bacteria 1639
35 Ga0307406_10000162 3300031901 Bacteria 40382
36 Ga0307406_10001175 3300031901 Bacteria 14666
37 Ga0307406_10074627 3300031901 Bacteria 2234
38 Ga0307406_10281416 3300031901 Bacteria 1269
39 Ga0307416_100195089 3300032002 Bacteria 1914
40 Ga0307416_103070367 3300032002 Bacteria 559
41 Ga0307414_10553818 3300032004 Bacteria 1025
42 Ga0307414_10679596 3300032004 Bacteria 930
43 Ga0307414_10995949 3300032004 Bacteria 771
44 Ga0307414_11186930 3300032004 Bacteria 706
45 Ga0395900_0175921 3300037418 Bacteria 2177
46 Ga0395901_0476001 3300038443 Bacteria 1274
47 Ga0439465_0011837 3300041413 Bacteria 2734
48 Ga0451791_0862768 3300041451 Bacteria 1167
49 Ga0451797_0984957 3300041453 Bacteria 780
50 Ga0451797_1254368 3300041453 Bacteria 1272
51 Ga0451798_0340201 3300041458 Bacteria 689
52 Ga0451807_0827790 3300041486 Bacteria 740
53 Ga0451833_1123769 3300041491 Bacteria 756
54 Ga0451853_4008129 3300041512 Bacteria 997
55 Ga0466972_0191106 3300044658 Bacteria 960
56 Ga0466965_0003519 3300044683 Bacteria 6878
57 Ga0466970_0000138 3300044765 Bacteria 33745
58 Ga0466970_0101071 3300044765 Bacteria 1570
59 Ga0466957_0089010 3300044842 Bacteria 1932
60 Ga0495627_001282 3300046453 Bacteria 15451
61 Ga0495686_0026784 3300047472 Bacteria 3771
62 Ga0496100_0002222 3300048903 Bacteria 9801
63 Ga0496101_0017640 3300048904 Bacteria 4842
64 Ga0496102_0478781 3300048905 Bacteria 1166
65 Ga0496103_0331206 3300048906 Bacteria 979
66 Ga0496104_0496796 3300048907 Bacteria 1131
67 Ga0496105_0019347 3300048908 Bacteria 5491
68 Ga0496106_0342911 3300048909 Bacteria 1200
69 Ga0496107_0001628 3300048910 Bacteria 14002
70 Ga0496110_0003054 3300048913 Bacteria 12694
71 Ga0496111_0039756 3300048914 Bacteria 3374
72 Ga0496112_0538318 3300048915 Bacteria 1102
73 Ga0496113_0213793 3300048916 Bacteria 1535
74 Ga0496114_0015884 3300048917 Bacteria 6059
75 Ga0496114_0924356 3300048917 Bacteria 754
76 Ga0496115_0015027 3300048918 Bacteria 5867
77 Ga0496116_0015223 3300048919 Bacteria 6092
78 Ga0496117_0003360 3300048920 Bacteria 18658
79 Ga0496118_0001579 3300048921 Bacteria 33796
80 Ga0496118_0081985 3300048921 Bacteria 2262
81 Ga0496119_0177744 3300048922 Bacteria 1119
82 Ga0496119_0188208 3300048922 Bacteria 1077
83 Ga0496120_0001117 3300048923 Bacteria 34800
84 Ga0496120_0194967 3300048923 Bacteria 985
85 Ga0496122_0000031 3300048925 Bacteria 329726
86 Ga0496122_0006841 3300048925 Bacteria 12929
87 Ga0496122_0074630 3300048925 Bacteria 2398
88 Ga0496122_0130525 3300048925 Bacteria 1598
89 Ga0496123_0000013 3300048926 Bacteria 439694
90 Ga0496124_0008832 3300048927 Bacteria 10461
91 Ga0496124_0322049 3300048927 Bacteria 1106
92 Ga0496124_0751871 3300048927 Bacteria 611
93 Ga0496125_0003644 3300048928 Bacteria 18440
94 Ga0496125_0003900 3300048928 Bacteria 17611
95 Ga0496125_0005703 3300048928 Bacteria 13724
96 Ga0496125_0006001 3300048928 Bacteria 13297
97 Ga0496125_0129596 3300048928 Bacteria 1779
98 Ga0496126_0002808 3300048929 Bacteria 22901
99 Ga0496126_0055278 3300048929 Bacteria 3592
100 Ga0496126_0068082 3300048929 Bacteria 3180
101 Ga0496126_0116667 3300048929 Bacteria 2320
102 Ga0501034_0004629 3300049571 Bacteria 15241
103 Ga0501034_0109534 3300049571 Bacteria 2753
104 Ga0501038_0007955 3300049574 Bacteria 9767
105 Ga0501038_0171553 3300049574 Bacteria 1756
106 Ga0501038_0359588 3300049574 Bacteria 1132
107 nmdc:mga03n38_229218_c1 3300050490 Bacteria 973
108 nmdc:mga00v17_141084_c1 3300050491 Bacteria 1545
109 nmdc:mga00v17_4808_c1 3300050491 Bacteria 7070
110 nmdc:mga00v17_661931_c1 3300050491 Bacteria 671
111 nmdc:mga00v17_78403_c1 3300050491 Bacteria 2058
112 nmdc:mga06z11_20472_c1 3300050494 Bacteria 3058
113 nmdc:mga04h51_23871_c1 3300050495 Bacteria 1866
114 nmdc:mga0sz30_166502_c1 3300050516 Bacteria 977
115 nmdc:mga0sz30_5818_c1 3300050516 Bacteria 3437
116 Ga0500562_047591 3300053108 Bacteria 1145

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025925 Ga0207650_10262611 Ga0207650_102626112 150
2 iso_pu_bacteria 8004212874 8004213997 155
3 3300009148 Ga0105243_10440324 Ga0105243_104403242 157
4 3300025728 Ga0207655_1007830 Ga0207655_10078302 157
5 3300025935 Ga0207709_10285881 Ga0207709_102858812 157
6 3300041458 Ga0451798_0340201 Ga0451798_0340201_182_655 157
7 iso_pu_bacteria 2643221542 2643733801 157
8 iso_pu_bacteria 2643221630 2644170382 157
9 iso_pu_bacteria 2852663356 2852665133 157
10 3300006051 Ga0075364_10011523 Ga0075364_100115235 158
11 3300006051 Ga0075364_10096128 Ga0075364_100961283 158
12 3300031901 Ga0307406_10000162 Ga0307406_100001622 158
13 3300049571 Ga0501034_0109534 Ga0501034_0109534_1358_1834 158
14 3300049574 Ga0501038_0007955 Ga0501038_0007955_201_677 158
15 3300050491 nmdc:mga00v17_4808_c1 nmdc:mga00v17_4808_c1_4727_5203 158
16 3300050491 nmdc:mga00v17_661931_c1 nmdc:mga00v17_661931_c1_11_487 158
17 iso_pu_bacteria 2643221553 2643785603 158
18 iso_pu_bacteria 2643221724 2644680017 158
19 iso_pu_bacteria 2728369380 2730229515 158
20 iso_pu_bacteria 2747842429 2747951820 158
21 iso_pu_bacteria 2857723135 2857723657 158
22 iso_pu_bacteria 2946080515 2946081081 158
23 iso_pu_bacteria 8004182704 8004185282 158
24 3300048917 Ga0496114_0015884 Ga0496114_0015884_2561_3055 159
25 3300005530 Ga0070679_100688780 Ga0070679_1006887802 160
26 3300005539 Ga0068853_100047409 Ga0068853_1000474094 160
27 3300005563 Ga0068855_100472444 Ga0068855_1004724442 160
28 3300006038 Ga0075365_10012270 Ga0075365_100122705 160
29 3300006042 Ga0075368_10042487 Ga0075368_100424872 160
30 3300006048 Ga0075363_100323738 Ga0075363_1003237382 160
31 3300006178 Ga0075367_10010759 Ga0075367_100107592 160
32 3300025904 Ga0207647_10025653 Ga0207647_100256532 160
33 3300025921 Ga0207652_10382765 Ga0207652_103827652 160
34 3300025932 Ga0207690_10339819 Ga0207690_103398192 160
35 3300037418 Ga0395900_0175921 Ga0395900_0175921_516_1010 160
36 3300038443 Ga0395901_0476001 Ga0395901_0476001_725_1219 160
37 3300048919 Ga0496116_0015223 Ga0496116_0015223_1421_1909 160
38 3300048921 Ga0496118_0001579 Ga0496118_0001579_31263_31751 160
39 3300048922 Ga0496119_0188208 Ga0496119_0188208_380_868 160
40 3300048923 Ga0496120_0001117 Ga0496120_0001117_2768_3256 160
41 3300048925 Ga0496122_0000031 Ga0496122_0000031_59077_59565 160
42 3300048926 Ga0496123_0000013 Ga0496123_0000013_59087_59575 160
43 3300048927 Ga0496124_0008832 Ga0496124_0008832_9792_10280 160
44 3300048928 Ga0496125_0003644 Ga0496125_0003644_12145_12633 160
45 3300048929 Ga0496126_0055278 Ga0496126_0055278_3025_3513 160
46 3300050490 nmdc:mga03n38_229218_c1 nmdc:mga03n38_229218_c1_285_770 160
47 3300050494 nmdc:mga06z11_20472_c1 nmdc:mga06z11_20472_c1_476_961 160
48 3300050495 nmdc:mga04h51_23871_c1 nmdc:mga04h51_23871_c1_182_667 160
49 3300050516 nmdc:mga0sz30_166502_c1 nmdc:mga0sz30_166502_c1_247_732 160
50 iso_pu_bacteria 2585428157 2588109013 160
51 iso_pu_bacteria 2852646457 2852647406 160
52 iso_pu_bacteria 2945968032 2945971892 160
53 3300046453 Ga0495627_001282 Ga0495627_001282_14884_15369 161
54 3300048925 Ga0496122_0130525 Ga0496122_0130525_29_514 161
55 3300048928 Ga0496125_0129596 Ga0496125_0129596_909_1394 161
56 iso_pu_bacteria 2643221566 2643848523 161
57 3300002738 JGI25154J39366_1002642 JGI25154J39366_10026423 162
58 3300006038 Ga0075365_11174093 Ga0075365_111740931 162
59 3300025246 Ga0209646_1000099 Ga0209646_1000099155 162
60 3300031901 Ga0307406_10001175 Ga0307406_100011754 162
61 3300032004 Ga0307414_10679596 Ga0307414_106795961 162
62 3300032004 Ga0307414_10995949 Ga0307414_109959491 162
63 3300041451 Ga0451791_0862768 Ga0451791_0862768_142_630 162
64 3300041453 Ga0451797_1254368 Ga0451797_1254368_125_613 162
65 3300041512 Ga0451853_4008129 Ga0451853_4008129_26_514 162
66 3300044765 Ga0466970_0101071 Ga0466970_0101071_272_760 162
67 3300047472 Ga0495686_0026784 Ga0495686_0026784_1150_1641 162
68 3300048925 Ga0496122_0006841 Ga0496122_0006841_11133_11636 162
69 3300048927 Ga0496124_0322049 Ga0496124_0322049_483_971 162
70 3300048928 Ga0496125_0006001 Ga0496125_0006001_6532_7035 162
71 3300048929 Ga0496126_0068082 Ga0496126_0068082_2551_3054 162
72 3300048929 Ga0496126_0116667 Ga0496126_0116667_1421_1909 162
73 iso_pu_bacteria 2643221575 2643885276 163
74 iso_pu_bacteria 2870628048 2870630477 163
75 3300006038 Ga0075365_10001882 Ga0075365_100018829 164
76 3300006051 Ga0075364_10029372 Ga0075364_100293724 164
77 3300006051 Ga0075364_10297951 Ga0075364_102979512 164
78 3300031901 Ga0307406_10281416 Ga0307406_102814162 164
79 3300048920 Ga0496117_0003360 Ga0496117_0003360_13073_13567 164
80 3300048921 Ga0496118_0081985 Ga0496118_0081985_130_624 164
81 3300048925 Ga0496122_0074630 Ga0496122_0074630_1316_1810 164
82 3300048928 Ga0496125_0003900 Ga0496125_0003900_8740_9237 164
83 3300048928 Ga0496125_0005703 Ga0496125_0005703_8319_8813 164
84 3300048929 Ga0496126_0002808 Ga0496126_0002808_14904_15398 164
85 3300050491 nmdc:mga00v17_141084_c1 nmdc:mga00v17_141084_c1_761_1255 164
86 3300050516 nmdc:mga0sz30_5818_c1 nmdc:mga0sz30_5818_c1_1738_2235 164
87 3300053108 Ga0500562_047591 Ga0500562_047591_332_829 164
88 iso_pu_bacteria 2643221597 2643996016 164
89 3300013105 Ga0157369_10536928 Ga0157369_105369282 165
90 3300013306 Ga0163162_10169805 Ga0163162_101698052 165
91 3300013307 Ga0157372_10903066 Ga0157372_109030662 165
92 3300048903 Ga0496100_0002222 Ga0496100_0002222_6945_7454 165
93 3300048904 Ga0496101_0017640 Ga0496101_0017640_2773_3285 165
94 3300048905 Ga0496102_0478781 Ga0496102_0478781_330_842 165
95 3300048906 Ga0496103_0331206 Ga0496103_0331206_229_741 165
96 3300048908 Ga0496105_0019347 Ga0496105_0019347_523_1035 165
97 3300048909 Ga0496106_0342911 Ga0496106_0342911_403_915 165
98 3300048910 Ga0496107_0001628 Ga0496107_0001628_9882_10391 165
99 3300048913 Ga0496110_0003054 Ga0496110_0003054_1685_2197 165
100 3300048914 Ga0496111_0039756 Ga0496111_0039756_312_824 165
101 3300048915 Ga0496112_0538318 Ga0496112_0538318_199_708 165
102 3300048916 Ga0496113_0213793 Ga0496113_0213793_448_960 165
103 3300048918 Ga0496115_0015027 Ga0496115_0015027_4433_4942 165
104 3300048922 Ga0496119_0177744 Ga0496119_0177744_55_567 165
105 3300048923 Ga0496120_0194967 Ga0496120_0194967_55_567 165
106 3300048927 Ga0496124_0751871 Ga0496124_0751871_26_538 165
107 3300049571 Ga0501034_0004629 Ga0501034_0004629_7078_7575 165
108 iso_pu_bacteria 2808606447 2809227537 165
109 iso_pu_bacteria 2852632344 2852634298 165
110 3300041413 Ga0439465_0011837 Ga0439465_0011837_1371_1883 166
111 3300041453 Ga0451797_0984957 Ga0451797_0984957_150_665 166
112 3300041486 Ga0451807_0827790 Ga0451807_0827790_53_553 166
113 iso_pu_bacteria 2773857763 2774399367 166
114 iso_pu_bacteria 2811994872 2812323319 166
115 iso_pu_bacteria 2946033335 2946033667 166
116 3300044683 Ga0466965_0003519 Ga0466965_0003519_5299_5814 167
117 iso_pu_bacteria 2919395869 2919396526 167
118 3300032002 Ga0307416_103070367 Ga0307416_1030703671 168
119 3300044658 Ga0466972_0191106 Ga0466972_0191106_289_828 168
120 3300044765 Ga0466970_0000138 Ga0466970_0000138_1086_1625 168
121 3300044842 Ga0466957_0089010 Ga0466957_0089010_601_1140 168
122 iso_pu_bacteria 2946041624 2946044055 168
123 3300005356 Ga0070674_100456410 Ga0070674_1004564101 169
124 3300041491 Ga0451833_1123769 Ga0451833_1123769_145_657 169
125 3300048907 Ga0496104_0496796 Ga0496104_0496796_533_1057 169
126 3300048917 Ga0496114_0924356 Ga0496114_0924356_49_573 169
127 3300050491 nmdc:mga00v17_78403_c1 nmdc:mga00v17_78403_c1_830_1339 169
128 3300006186 Ga0075369_10029021 Ga0075369_100290213 170
129 3300006186 Ga0075369_10097188 Ga0075369_100971882 170
130 3300013104 Ga0157370_10449657 Ga0157370_104496571 170
131 3300014326 Ga0157380_11951324 Ga0157380_119513241 170
132 3300027866 Ga0209813_10028037 Ga0209813_100280372 170
133 3300031901 Ga0307406_10074627 Ga0307406_100746273 170
134 3300032002 Ga0307416_100195089 Ga0307416_1001950891 170
135 3300032004 Ga0307414_10553818 Ga0307414_105538182 170
136 3300032004 Ga0307414_11186930 Ga0307414_111869301 170
137 3300049574 Ga0501038_0171553 Ga0501038_0171553_1204_1725 170
138 3300049574 Ga0501038_0359588 Ga0501038_0359588_400_918 170
139 3300013306 Ga0163162_11649866 Ga0163162_116498662 171
140 3300001979 JGI24740J21852_10003347 JGI24740J21852_100033473 181
141 3300013102 Ga0157371_10056707 Ga0157371_100567072 181

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03061

4HBT

Thioesterase superfamily

32

125

0.95

PF13279

4HBT_2

Thioesterase-like superfamily

24

138

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rd7-assembly1.cif.gz_A crystal structure of acyl-coa thioesterase from mycobacterium avium 0.9102 86 151
7qv0-assembly1.cif.gz_A-2 covalent complex between scalindua brodae amxfabz and amxacp 0.8859 86 151
1tbu-assembly1.cif.gz_D crystal structure of n-terminal domain of yeast peroxisomal thioesterase-1 0.8834 88 148
3cjy-assembly1.cif.gz_A-2 crystal structure of putative thioesterase (yp_496845.1) from novosphingobium aromaticivorans dsm 12444 at 1.70 a resolution 0.876 90 148
8ayi-assembly1.cif.gz_A scalindua brodae amxfabz h48n mutant 0.8745 88 148
ID Description Score Start End Superfamily
af_O06135_6_288_2.40.160.210 Mainly Beta;Beta Barrel;Porin;Acyl-CoA thioesterase, double hotdog domain 0.8823 86 149 2.40.160.210
3cjyA00 Mainly Beta;Beta Barrel;Porin;Acyl-CoA thioesterase, double hotdog domain 0.876 90 148 2.40.160.210
af_O14734_26_311_2.40.160.210 Mainly Beta;Beta Barrel;Porin;Acyl-CoA thioesterase, double hotdog domain 0.8713 87 149 2.40.160.210
4gwhA00 Mainly Beta;Beta Barrel;Porin;Acyl-CoA thioesterase, double hotdog domain 0.8678 85 151 2.40.160.210
af_O07408_6_147_3.10.129.10 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8654 29 170 3.10.129.10
ID Description Score Start End GO Terms
AF-A0A134DL37-F1-model_v4 deleted 0.98 26 181
AF-A0A134DL37-F1-model_v4 deleted 0.9678 26 181
AF-A0A4R5YEL7-F1-model_v4 Acyl-CoA thioesterase 0.9663 26 181 GO:0047617
AF-A0A522P0R1-F1-model_v4 Acyl-CoA thioesterase 0.96 27 178 GO:0047617
AF-A0A4P6EV71-F1-model_v4 Acyl-CoA thioesterase 0.9544 31 181 GO:0047617

Feature Viewer

pLDDT pTM Quality
81.81 0.77 High
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Predicted Structure (AlphaFold2)

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