F181968

General Info

Members Datasets Scaffolds Average Seq Length
141 122 282 237

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100105357|Ga0070699_1001053574
Length 272
Sequence MNHPPTAVGGILRDFDASAYKRVPRPNAMKVAEITRELSSLADSGTASFLQRFFKTGPGEYGDGDLFRGIRVPVLRKLAKKYQHLSLPEIAKLLHSFHHEDRLLALLILVRTYSSGDDAVKEKIHQLYLRNTRSINNWDLVDASAPQIVGAFLWEKDHAVLDRLARSSDLWERRIAIMATFHFIKRGEFTKTLQLAEILLPDREDLIHKAVGWMLREVGNRNLKVEERFLRKHYKQMPRVMLRYAIEKFPEPKRQQYLKGTLSKAHVNPDVS

Samples

Sample ID Description Type Environment
1 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
31 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
44 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
46 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
47 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
48 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
49 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
50 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
51 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
52 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
53 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
54 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
55 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
58 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
59 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
60 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
61 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
62 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
63 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
64 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
67 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
68 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
71 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
72 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
73 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
74 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
75 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
76 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
77 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
78 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
79 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
80 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
81 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
82 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
83 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
88 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
89 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
90 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
91 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
92 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
93 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
94 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
95 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
96 2558860280 Kutzneria sp. 744 Isolate Unclassified
97 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
98 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
99 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
100 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
101 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
102 2858868258 Micromonospora sp. MH33 Isolate Unclassified
103 2858882152 Micromonospora noduli MED15 Isolate Nodule
104 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
105 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
106 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
107 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
108 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
109 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
110 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
111 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
112 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
113 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
114 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
115 2902582711 Micromonospora sp. AP08 Isolate Unclassified
116 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
117 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
118 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
119 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
120 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
121 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
122 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 80.14
Metatranscriptomes 0.71
Isolates 19.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.71
Nodule 4.26
Rhizoplane 2.13
Rhizosphere 71.63
Stem 0
Stem Tuber 0
Unclassified 4.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100105357 3300005518 Bacteria 2474
2 MBSR1b_contig_3732164 2162886012 Bacteria 1451
3 Ga0065715_10137013 3300005293 Bacteria 1913
4 Ga0070683_100016870 3300005329 Bacteria 6443
5 Ga0070677_10153021 3300005333 Bacteria 1075
6 Ga0070660_100073690 3300005339 Bacteria 2670
7 Ga0070675_100025534 3300005354 Bacteria 4736
8 Ga0070675_100061879 3300005354 Bacteria 3092
9 Ga0070674_100074450 3300005356 Bacteria 2410
10 Ga0070674_100380407 3300005356 Bacteria 1148
11 Ga0070714_100234804 3300005435 Bacteria 1690
12 Ga0070700_100077723 3300005441 Bacteria 2135
13 Ga0070662_100180677 3300005457 Bacteria 1663
14 Ga0070681_10333485 3300005458 Bacteria 1426
15 Ga0070698_100623963 3300005471 Bacteria 1019
16 Ga0068853_100011451 3300005539 Bacteria 7208
17 Ga0070665_100172064 3300005548 Unclassified 2167
18 Ga0070664_100053998 3300005564 Bacteria 3408
19 Ga0070664_100486017 3300005564 Bacteria 1137
20 Ga0070664_100516518 3300005564 Bacteria 1102
21 Ga0068852_100164567 3300005616 Bacteria 2074
22 Ga0075428_100064845 3300006844 Bacteria 4000
23 Ga0075430_100090289 3300006846 Bacteria 2563
24 Ga0075431_100152462 3300006847 Bacteria 2379
25 Ga0075429_100026848 3300006880 Bacteria 4998
26 Ga0075435_100030989 3300007076 Bacteria 4210
27 Ga0111539_10047042 3300009094 Bacteria 5158
28 Ga0111539_10345131 3300009094 Bacteria 1733
29 Ga0114129_10220056 3300009147 Bacteria 2562
30 Ga0105237_10059284 3300009545 Bacteria 3830
31 Ga0105238_10021438 3300009551 Bacteria 6580
32 Ga0105249_10456838 3300009553 Bacteria 1317
33 Ga0157369_10045705 3300013105 Bacteria 4760
34 Ga0157372_10228317 3300013307 Bacteria 2158
35 Ga0157380_10017009 3300014326 Bacteria 5372
36 Ga0157380_10757166 3300014326 Bacteria 983
37 Ga0206356_10529719 3300020070 Bacteria 1915
38 Ga0207697_10044442 3300025315 Bacteria 1828
39 Ga0207705_10023535 3300025909 Bacteria 4394
40 Ga0207707_10278812 3300025912 Bacteria 1448
41 Ga0207671_10022686 3300025914 Bacteria 4742
42 Ga0207657_10089773 3300025919 Bacteria 2566
43 Ga0207652_10021085 3300025921 Bacteria 5375
44 Ga0207694_10019988 3300025924 Bacteria 5066
45 Ga0207659_10175893 3300025926 Bacteria 1692
46 Ga0207706_10178790 3300025933 Bacteria 1864
47 Ga0207667_10078386 3300025949 Bacteria 3424
48 Ga0207708_10113020 3300026075 Bacteria 2110
49 Ga0207428_10091530 3300027907 Bacteria 2361
50 Ga0268266_10143658 3300028379 Unclassified 2143
51 Ga0307511_10001059 3300030521 Bacteria 29254
52 Ga0316576_10011225 3300031727 Bacteria 5858
53 Ga0316576_10032353 3300031727 Bacteria 3716
54 Ga0316576_10112000 3300031727 Bacteria 2046
55 Ga0316578_10059830 3300031728 Bacteria 2241
56 Ga0316577_10072893 3300031733 Bacteria 1917
57 Ga0307414_10000088 3300032004 Bacteria 84711
58 Ga0307414_10115031 3300032004 Bacteria 2056
59 Ga0307414_10115717 3300032004 Bacteria 2051
60 Ga0307414_10271883 3300032004 Bacteria 1419
61 Ga0373934_0000906 3300035086 Bacteria 10716
62 Ga0373956_0003220 3300035119 Bacteria 6591
63 Ga0373957_0043554 3300035120 Bacteria 1696
64 Ga0373955_0158985 3300035172 Bacteria 1332
65 Ga0316574_0137311 3300035398 Bacteria 1574
66 Ga0373933_0002285 3300035724 Bacteria 10910
67 Ga0373937_0000986 3300036401 Bacteria 24157
68 Ga0316582_0010481 3300036647 Bacteria 5079
69 Ga0316582_0019402 3300036647 Bacteria 3979
70 Ga0316582_0036470 3300036647 Bacteria 3043
71 Ga0316584_0012354 3300036712 Bacteria 6020
72 Ga0316584_0017490 3300036712 Bacteria 5156
73 Ga0316584_0086903 3300036712 Bacteria 2340
74 Ga0373925_0075590 3300037068 Bacteria 2553
75 Ga0400484_07439 3300038725 Bacteria 8913
76 Ga0400488_42426 3300038741 Bacteria 1816
77 Ga0400483_048344 3300039062 Unclassified 1121
78 Ga0400483_145298 3300039062 Bacteria 6782
79 Ga0400483_164027 3300039062 Bacteria 10726
80 Ga0400489_13907 3300039093 Bacteria 2071
81 Ga0400487_43546 3300039110 Bacteria 1702
82 Ga0400487_61023 3300039110 Bacteria 2915
83 Ga0436365_0230909 3300039437 Bacteria 26489
84 Ga0451807_2722275 3300041486 Unclassified 991
85 Ga0451837_1648338 3300041494 Bacteria 2952
86 Ga0439443_013247 3300042003 Bacteria 1230
87 Ga0453684_0088260 3300044712 Unclassified 3840
88 Ga0453684_1055185 3300044712 Bacteria 861
89 Ga0451576_0091887 3300045051 Unclassified 3157
90 Ga0495651_0237855 3300046462 Bacteria 1251
91 Ga0495653_0262394 3300046463 Bacteria 1141
92 Ga0495643_0000512 3300046522 Bacteria 48356
93 Ga0495652_0035468 3300046529 Bacteria 4342
94 Ga0495587_0001863 3300046536 Bacteria 14042
95 Ga0495645_0001004 3300046543 Bacteria 19223
96 Ga0495657_0066072 3300046675 Bacteria 2377
97 Ga0495623_0017492 3300046679 Bacteria 4632
98 Ga0495675_0005051 3300047444 Bacteria 8029
99 Ga0495684_0045844 3300047471 Bacteria 3345
100 Ga0496104_0731985 3300048907 Bacteria 896
101 Ga0496112_0166610 3300048915 Bacteria 2169
102 Ga0501033_0339652 3300049570 Bacteria 1053
103 Ga0501038_0265292 3300049574 Bacteria 1356
104 Ga0501040_0068960 3300049576 Bacteria 2439
105 Ga0501047_0028838 3300049581 Bacteria 5354
106 Ga0501071_0048247 3300049587 Bacteria 3062
107 Ga0501075_0301085 3300049591 Bacteria 1222
108 Ga0501045_0338589 3300049824 Bacteria 1120
109 nmdc:mga0qj67_95184_c1 3300050509 Bacteria 2397
110 nmdc:mga06r32_320452_c1 3300050510 Bacteria 1536
111 nmdc:mga08y16_161952_c1 3300050511 Bacteria 2325
112 nmdc:mga0rr50_4203_c1 3300050513 Bacteria 8418
113 nmdc:mga0a205_449003_c1 3300050515 Bacteria 1149
114 Ga0500628_000235 3300053129 Bacteria 10699
115 2559423337 2558860280 Bacteria 11429938
116 2623588828 2622736626 Bacteria 7181580
117 2855676140 2855670206 Bacteria 7120389
118 2855681127 2855676851 Bacteria 7063653
119 2857294131 2857288857 Bacteria 7189066
120 2858851712 2858848962 Bacteria 6963058
121 2858870465 2858868258 Bacteria 7683772
122 2858882791 2858882152 Bacteria 7230291
123 2858894967 2858888857 Bacteria 7060307
124 2858899977 2858895516 Bacteria 7378898
125 2867318125 2867312974 Bacteria 7058875
126 2867324314 2867319477 Bacteria 7069771
127 2867507358 2867507094 Bacteria 6506033
128 2869052791 2869048445 Bacteria 6875584
129 2869066876 2869061728 Bacteria 7112407
130 2869068702 2869068681 Bacteria 7205615
131 2880490549 2880489317 Bacteria 7096270
132 2880501964 2880495981 Bacteria 7340502
133 2884637445 2884634485 Bacteria 3928637
134 2902585073 2902582711 Bacteria 6187705
135 2919694916 2919692658 Bacteria 5943958
136 2929224101 2929219909 Bacteria 6984360
137 2929230497 2929226422 Bacteria 7248583
138 8054709425 8054704163 Bacteria 7247792
139 8054734007 8054727385 Bacteria 7558670
140 8054735552 8054734606 Bacteria 6947278
141 8055412494 8055412473 Bacteria 6257500
142 Ga0070699_100105357
143 MBSR1b_contig_3732164
144 Ga0065715_10137013
145 Ga0070683_100016870
146 Ga0070677_10153021
147 Ga0070660_100073690
148 Ga0070675_100025534
149 Ga0070675_100061879
150 Ga0070674_100074450
151 Ga0070674_100380407
152 Ga0070714_100234804
153 Ga0070700_100077723
154 Ga0070662_100180677
155 Ga0070681_10333485
156 Ga0070698_100623963
157 Ga0068853_100011451
158 Ga0070665_100172064
159 Ga0070664_100053998
160 Ga0070664_100486017
161 Ga0070664_100516518
162 Ga0068852_100164567
163 Ga0075428_100064845
164 Ga0075430_100090289
165 Ga0075431_100152462
166 Ga0075429_100026848
167 Ga0075435_100030989
168 Ga0111539_10047042
169 Ga0111539_10345131
170 Ga0114129_10220056
171 Ga0105237_10059284
172 Ga0105238_10021438
173 Ga0105249_10456838
174 Ga0157369_10045705
175 Ga0157372_10228317
176 Ga0157380_10017009
177 Ga0157380_10757166
178 Ga0206356_10529719
179 Ga0207697_10044442
180 Ga0207705_10023535
181 Ga0207707_10278812
182 Ga0207671_10022686
183 Ga0207657_10089773
184 Ga0207652_10021085
185 Ga0207694_10019988
186 Ga0207659_10175893
187 Ga0207706_10178790
188 Ga0207667_10078386
189 Ga0207708_10113020
190 Ga0207428_10091530
191 Ga0268266_10143658
192 Ga0307511_10001059
193 Ga0316576_10011225
194 Ga0316576_10032353
195 Ga0316576_10112000
196 Ga0316578_10059830
197 Ga0316577_10072893
198 Ga0307414_10000088
199 Ga0307414_10115031
200 Ga0307414_10115717
201 Ga0307414_10271883
202 Ga0373934_0000906
203 Ga0373956_0003220
204 Ga0373957_0043554
205 Ga0373955_0158985
206 Ga0316574_0137311
207 Ga0373933_0002285
208 Ga0373937_0000986
209 Ga0316582_0010481
210 Ga0316582_0019402
211 Ga0316582_0036470
212 Ga0316584_0012354
213 Ga0316584_0017490
214 Ga0316584_0086903
215 Ga0373925_0075590
216 Ga0400484_07439
217 Ga0400488_42426
218 Ga0400483_048344
219 Ga0400483_145298
220 Ga0400483_164027
221 Ga0400489_13907
222 Ga0400487_43546
223 Ga0400487_61023
224 Ga0436365_0230909
225 Ga0451807_2722275
226 Ga0451837_1648338
227 Ga0439443_013247
228 Ga0453684_0088260
229 Ga0453684_1055185
230 Ga0451576_0091887
231 Ga0495651_0237855
232 Ga0495653_0262394
233 Ga0495643_0000512
234 Ga0495652_0035468
235 Ga0495587_0001863
236 Ga0495645_0001004
237 Ga0495657_0066072
238 Ga0495623_0017492
239 Ga0495675_0005051
240 Ga0495684_0045844
241 Ga0496104_0731985
242 Ga0496112_0166610
243 Ga0501033_0339652
244 Ga0501038_0265292
245 Ga0501040_0068960
246 Ga0501047_0028838
247 Ga0501071_0048247
248 Ga0501075_0301085
249 Ga0501045_0338589
250 nmdc:mga0qj67_95184_c1
251 nmdc:mga06r32_320452_c1
252 nmdc:mga08y16_161952_c1
253 nmdc:mga0rr50_4203_c1
254 nmdc:mga0a205_449003_c1
255 Ga0500628_000235
256 2559423337
257 2623588828
258 2855676140
259 2855681127
260 2857294131
261 2858851712
262 2858870465
263 2858882791
264 2858894967
265 2858899977
266 2867318125
267 2867324314
268 2867507358
269 2869052791
270 2869066876
271 2869068702
272 2880490549
273 2880501964
274 2884637445
275 2902585073
276 2919694916
277 2929224101
278 2929230497
279 8054709425
280 8054734007
281 8054735552
282 8055412494

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08713

DNA_alkylation

DNA alkylation repair enzyme

34

249

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5clc-assembly1.cif.gz_A alkylpurine dna glycosylase alkd bound to dna containing a 3-methyladenine analog (9-mer b) 0.8227 3 225
5cl3-assembly1.cif.gz_A alkylpurine dna glycosylase alkd bound to dna containing a 3-methyladenine analog (100% substrate at 4 hours) 0.8077 1 227
5clc-assembly1.cif.gz_A alkylpurine dna glycosylase alkd bound to dna containing a 3-methyladenine analog (9-mer b) 0.7994 3 225
5cl3-assembly1.cif.gz_A alkylpurine dna glycosylase alkd bound to dna containing a 3-methyladenine analog (100% substrate at 4 hours) 0.7856 1 227
2b6c-assembly1.cif.gz_A predicted dna alkylation repair enzyme from enterococcus faecalis. 0.7735 15 225
ID Description Score Start End Superfamily
5clcA00 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant; 0.8227 3 225 1.25.10.90
5clcA00 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant; 0.7994 3 225 1.25.10.90
3l9tA02 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;ARM repeat domains 0.7645 119 225 1.25.40.290
2b6cA02 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;ARM repeat domains 0.7436 133 225 1.25.40.290
2b6cA02 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;ARM repeat domains 0.7227 133 225 1.25.40.290
ID Description Score Start End GO Terms
AF-A0A7X9BG83-F1-model_v4 DNA alkylation repair protein 1.002 154 236
AF-A0A1S6H1U9-F1-model_v4 DNA alkylation repair enzyme 1.001 141 236
AF-A0A7X3R881-F1-model_v4 DNA alkylation repair protein 1.001 166 236
AF-A0A7X8K2X3-F1-model_v4 DNA alkylation repair protein 0.994 135 236
AF-A0A832IB90-F1-model_v4 DNA alkylation repair protein 0.9937 165 236

Map