F181039

General Info

Members Datasets Scaffolds Average Seq Length
140 108 280 397

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2675903058|2676474400
Length 433
Sequence GRPRQPISSSAETGPAWWVADSVVTSRPSAELCEHTFVTADATILHADLDAFYASVEQRDDPGLRGRPVIVGGGVVLAASYEAKAHGVRTAMGGAQARQLCPQAIVVPPRMSAYSDASAAVFEVFEQTTPLVEGLSIDEAFLDVAGLRRISGTPADIAAKLRRDVLDQVGLPITVGVARTKFLAKVASGVAKPDGLLVVPPDGELDFLHPLKVGRLWGVGEVTAKKLHDRGITTVGHVAELPQSALVAMLGQAAGRHLHALAHNRDPRPVRVGQRRGSVGAQRALGSRPRSAEEVDAILIELVDRVTRRMRSAGRTGRTVVLRLRFADFSQVTRSHTLSHPTAQTHEILQAVRGLRAAAAPTIERRGLTLVGVAVGNLDDDSAVQLALPFDRRQHDALDEAVDKVRRRFDSGAVTRAALLGRDEGISVPLLPD

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
3 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
4 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
5 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
6 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
7 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
8 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
10 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
11 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
12 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
13 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
14 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
15 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
16 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
17 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
18 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
23 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
24 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
25 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
26 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
27 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
28 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
29 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
30 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
31 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
32 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
33 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
34 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
35 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
36 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
37 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
38 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
39 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
40 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
41 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
42 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
43 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
44 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
45 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
46 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
47 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
48 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
49 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
50 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
51 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
52 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
53 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
56 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
57 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
62 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
64 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
65 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
66 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
67 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
68 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
69 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
70 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
71 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
72 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
74 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
75 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
76 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
77 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
78 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
79 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
80 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
81 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
82 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
83 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
84 2643221692 Nocardia sp. Root136 Isolate Unclassified
85 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
86 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
87 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
88 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
89 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
90 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
91 2858882152 Micromonospora noduli MED15 Isolate Nodule
92 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
93 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
94 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
95 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
96 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
97 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
98 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
99 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
100 2902582711 Micromonospora sp. AP08 Isolate Unclassified
101 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
102 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
103 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
104 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
105 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
106 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
107 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
108 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 81.43
Metatranscriptomes 0
Isolates 18.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.14
Nodule 4.29
Rhizoplane 7.86
Rhizosphere 68.57
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100022032 3300005445 Bacteria 5400
2 Ga0070681_10015643 3300005458 Bacteria 7556
3 Ga0070698_100007996 3300005471 Bacteria 11435
4 Ga0070699_100022290 3300005518 Bacteria 5458
5 Ga0068864_100129061 3300005618 Bacteria 2269
6 Ga0081455_10001386 3300005937 Bacteria 29914
7 Ga0081455_10048973 3300005937 Bacteria 3646
8 Ga0081455_10064749 3300005937 Bacteria 3060
9 Ga0081538_10058412 3300005981 Bacteria 2237
10 Ga0081539_10000253 3300005985 Bacteria 124747
11 Ga0075365_10150840 3300006038 Bacteria 1617
12 Ga0075428_100000001 3300006844 Bacteria 772630
13 Ga0075428_100040078 3300006844 Bacteria 5154
14 Ga0075428_100164025 3300006844 Bacteria 2411
15 Ga0075430_100020268 3300006846 Bacteria 5657
16 Ga0075431_100055147 3300006847 Bacteria 4099
17 Ga0075431_100151822 3300006847 Bacteria 2385
18 Ga0075429_100002439 3300006880 Bacteria 15654
19 Ga0114129_10006559 3300009147 Bacteria 16517
20 Ga0157369_10073753 3300013105 Bacteria 3661
21 Ga0157372_10251924 3300013307 Bacteria 2050
22 Ga0213876_10005616 3300021384 Bacteria 6884
23 Ga0213876_10031965 3300021384 Bacteria 2776
24 Ga0207684_10051442 3300025910 Bacteria 3495
25 Ga0207662_10005454 3300025918 Bacteria 6787
26 Ga0207648_10300987 3300026089 Bacteria 1438
27 Ga0207676_10334602 3300026095 Bacteria 1395
28 Ga0307513_10144516 3300031456 Bacteria 2299
29 Ga0307409_100042111 3300031995 Bacteria 3417
30 Ga0307416_100161916 3300032002 Bacteria 2069
31 Ga0307415_100149929 3300032126 Bacteria 1793
32 Ga0307507_10007751 3300033179 Bacteria 15320
33 Ga0307510_10197778 3300033180 Bacteria 1549
34 Ga0373931_0000019 3300035691 Bacteria 186534
35 Ga0373947_0045039 3300035725 Bacteria 2640
36 Ga0395901_0293486 3300038443 Bacteria 1687
37 Ga0436365_0099052 3300039437 Bacteria 4625
38 Ga0436365_0220011 3300039437 Bacteria 16879
39 Ga0436365_0576339 3300039437 Bacteria 2339
40 Ga0436363_1042759 3300039450 Bacteria 6685
41 Ga0466957_0154603 3300044842 Bacteria 1486
42 Ga0466960_0118938 3300044901 Bacteria 1382
43 Ga0466967_0118867 3300045976 Bacteria 2439
44 Ga0495641_0048257 3300046461 Bacteria 1953
45 Ga0495586_0075652 3300046535 Bacteria 1843
46 Ga0495623_0027282 3300046679 Bacteria 3673
47 Ga0496102_0010447 3300048905 Bacteria 7988
48 Ga0496104_0008694 3300048907 Bacteria 9031
49 Ga0496105_0008139 3300048908 Bacteria 8153
50 Ga0496106_0016920 3300048909 Bacteria 5396
51 Ga0496108_0018792 3300048911 Bacteria 5664
52 Ga0496109_0000742 3300048912 Bacteria 27105
53 Ga0496110_0001092 3300048913 Bacteria 19117
54 Ga0496110_0095637 3300048913 Bacteria 2661
55 Ga0496112_0169351 3300048915 Bacteria 2150
56 Ga0496113_0015700 3300048916 Bacteria 5215
57 Ga0496115_0038174 3300048918 Bacteria 3810
58 Ga0496126_0145058 3300048929 Bacteria 2040
59 Ga0501031_0016280 3300049568 Bacteria 4829
60 Ga0501033_0034235 3300049570 Bacteria 3812
61 Ga0501034_0011432 3300049571 Bacteria 9197
62 Ga0501034_0024943 3300049571 Bacteria 6083
63 Ga0501036_0229399 3300049572 Bacteria 1558
64 Ga0501037_0052217 3300049573 Bacteria 2990
65 Ga0501038_0011593 3300049574 Bacteria 8043
66 Ga0501039_0006091 3300049575 Bacteria 9156
67 Ga0501039_0098976 3300049575 Bacteria 2275
68 Ga0501040_0034724 3300049576 Bacteria 3416
69 Ga0501040_0036652 3300049576 Bacteria 3329
70 Ga0501041_0006640 3300049577 Bacteria 6776
71 Ga0501041_0091375 3300049577 Bacteria 1879
72 Ga0501041_0101441 3300049577 Bacteria 1782
73 Ga0501041_0175630 3300049577 Bacteria 1341
74 Ga0501042_0069613 3300049578 Bacteria 2516
75 Ga0501043_0072097 3300049579 Bacteria 2713
76 Ga0501047_0025129 3300049581 Bacteria 5722
77 Ga0501048_0040636 3300049582 Bacteria 3332
78 Ga0501048_0045215 3300049582 Bacteria 3146
79 Ga0501070_0299098 3300049586 Bacteria 1311
80 Ga0501071_0014102 3300049587 Bacteria 5464
81 Ga0501071_0059800 3300049587 Bacteria 2757
82 Ga0501072_0005168 3300049588 Bacteria 9928
83 Ga0501072_0213649 3300049588 Bacteria 1537
84 Ga0501074_0005472 3300049590 Bacteria 9137
85 Ga0501074_0023072 3300049590 Bacteria 4525
86 Ga0501075_0028014 3300049591 Bacteria 4156
87 Ga0501075_0046016 3300049591 Bacteria 3277
88 Ga0501075_0117057 3300049591 Bacteria 2026
89 Ga0501076_0056929 3300049592 Bacteria 3103
90 Ga0501076_0066424 3300049592 Bacteria 2879
91 Ga0501076_0132492 3300049592 Bacteria 2022
92 Ga0501077_0002972 3300049593 Bacteria 10170
93 Ga0501079_0001279 3300049741 Bacteria 17654
94 Ga0501079_0194472 3300049741 Bacteria 1583
95 Ga0501081_0009350 3300049743 Bacteria 6386
96 Ga0501081_0017466 3300049743 Bacteria 4750
97 Ga0501035_0116789 3300049822 Bacteria 2335
98 Ga0501045_0098013 3300049824 Bacteria 2169
99 nmdc:mga0yw44_5536_c1 3300050492 Bacteria 5986
100 nmdc:mga05p37_163516_c1 3300050507 Bacteria 2717
101 nmdc:mga05p37_2206_c1 3300050507 Bacteria 22683
102 nmdc:mga05p37_57928_c1 3300050507 Bacteria 4771
103 nmdc:mga09592_3681_c1 3300050508 Bacteria 12360
104 nmdc:mga0qj67_141151_c1 3300050509 Bacteria 1953
105 nmdc:mga0qj67_1811_c1 3300050509 Bacteria 15114
106 nmdc:mga0qj67_219288_c1 3300050509 Bacteria 1544
107 nmdc:mga06r32_72047_c1 3300050510 Bacteria 3345
108 Ga0500646_0000333 3300053090 Bacteria 14227
109 Ga0501084_0003989 3300054114 Bacteria 12025
110 Ga0501082_0008350 3300060353 Bacteria 8931
111 Ga0501082_0024965 3300060353 Bacteria 5149
112 Ga0530510_0087048 3300061734 Bacteria 2276
113 Ga0530510_0173562 3300061734 Bacteria 1597
114 Ga0530510_0174555 3300061734 Bacteria 1592
115 2676474400 2675903058 Bacteria 6822861
116 2644516060 2643221692 Bacteria 7282860
117 2676484483 2675903059 Bacteria 8644972
118 2816422695 2816332119 Bacteria 8120218
119 2816506178 2816332139 Bacteria 9138787
120 2827633128 2827628540 Bacteria 6858585
121 2855673247 2855670206 Bacteria 7120389
122 2857293560 2857288857 Bacteria 7189066
123 2858887621 2858882152 Bacteria 7230291
124 2858892738 2858888857 Bacteria 7060307
125 2858897017 2858895516 Bacteria 7378898
126 2867315198 2867312974 Bacteria 7058875
127 2867319805 2867319477 Bacteria 7069771
128 2869053033 2869048445 Bacteria 6875584
129 2869067056 2869061728 Bacteria 7112407
130 2869070187 2869068681 Bacteria 7205615
131 2880500683 2880495981 Bacteria 7340502
132 2902583328 2902582711 Bacteria 6187705
133 2929222871 2929219909 Bacteria 6984360
134 3003004508 3002998708 Bacteria 11715108
135 8003836003 8003830390 Bacteria 6541657
136 8003872899 8003870546 Bacteria 7396674
137 8054706083 8054704163 Bacteria 7247792
138 8054729083 8054727385 Bacteria 7558670
139 8054738124 8054734606 Bacteria 6947278
140 8055414329 8055412473 Bacteria 6257500
141 Ga0070708_100022032
142 Ga0070681_10015643
143 Ga0070698_100007996
144 Ga0070699_100022290
145 Ga0068864_100129061
146 Ga0081455_10001386
147 Ga0081455_10048973
148 Ga0081455_10064749
149 Ga0081538_10058412
150 Ga0081539_10000253
151 Ga0075365_10150840
152 Ga0075428_100000001
153 Ga0075428_100040078
154 Ga0075428_100164025
155 Ga0075430_100020268
156 Ga0075431_100055147
157 Ga0075431_100151822
158 Ga0075429_100002439
159 Ga0114129_10006559
160 Ga0157369_10073753
161 Ga0157372_10251924
162 Ga0213876_10005616
163 Ga0213876_10031965
164 Ga0207684_10051442
165 Ga0207662_10005454
166 Ga0207648_10300987
167 Ga0207676_10334602
168 Ga0307513_10144516
169 Ga0307409_100042111
170 Ga0307416_100161916
171 Ga0307415_100149929
172 Ga0307507_10007751
173 Ga0307510_10197778
174 Ga0373931_0000019
175 Ga0373947_0045039
176 Ga0395901_0293486
177 Ga0436365_0099052
178 Ga0436365_0220011
179 Ga0436365_0576339
180 Ga0436363_1042759
181 Ga0466957_0154603
182 Ga0466960_0118938
183 Ga0466967_0118867
184 Ga0495641_0048257
185 Ga0495586_0075652
186 Ga0495623_0027282
187 Ga0496102_0010447
188 Ga0496104_0008694
189 Ga0496105_0008139
190 Ga0496106_0016920
191 Ga0496108_0018792
192 Ga0496109_0000742
193 Ga0496110_0001092
194 Ga0496110_0095637
195 Ga0496112_0169351
196 Ga0496113_0015700
197 Ga0496115_0038174
198 Ga0496126_0145058
199 Ga0501031_0016280
200 Ga0501033_0034235
201 Ga0501034_0011432
202 Ga0501034_0024943
203 Ga0501036_0229399
204 Ga0501037_0052217
205 Ga0501038_0011593
206 Ga0501039_0006091
207 Ga0501039_0098976
208 Ga0501040_0034724
209 Ga0501040_0036652
210 Ga0501041_0006640
211 Ga0501041_0091375
212 Ga0501041_0101441
213 Ga0501041_0175630
214 Ga0501042_0069613
215 Ga0501043_0072097
216 Ga0501047_0025129
217 Ga0501048_0040636
218 Ga0501048_0045215
219 Ga0501070_0299098
220 Ga0501071_0014102
221 Ga0501071_0059800
222 Ga0501072_0005168
223 Ga0501072_0213649
224 Ga0501074_0005472
225 Ga0501074_0023072
226 Ga0501075_0028014
227 Ga0501075_0046016
228 Ga0501075_0117057
229 Ga0501076_0056929
230 Ga0501076_0066424
231 Ga0501076_0132492
232 Ga0501077_0002972
233 Ga0501079_0001279
234 Ga0501079_0194472
235 Ga0501081_0009350
236 Ga0501081_0017466
237 Ga0501035_0116789
238 Ga0501045_0098013
239 nmdc:mga0yw44_5536_c1
240 nmdc:mga05p37_163516_c1
241 nmdc:mga05p37_2206_c1
242 nmdc:mga05p37_57928_c1
243 nmdc:mga09592_3681_c1
244 nmdc:mga0qj67_141151_c1
245 nmdc:mga0qj67_1811_c1
246 nmdc:mga0qj67_219288_c1
247 nmdc:mga06r32_72047_c1
248 Ga0500646_0000333
249 Ga0501084_0003989
250 Ga0501082_0008350
251 Ga0501082_0024965
252 Ga0530510_0087048
253 Ga0530510_0173562
254 Ga0530510_0174555
255 2676474400
256 2644516060
257 2676484483
258 2816422695
259 2816506178
260 2827633128
261 2855673247
262 2857293560
263 2858887621
264 2858892738
265 2858897017
266 2867315198
267 2867319805
268 2869053033
269 2869067056
270 2869070187
271 2880500683
272 2902583328
273 2929222871
274 3003004508
275 8003836003
276 8003872899
277 8054706083
278 8054729083
279 8054738124
280 8055414329

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00817

IMS

impB/mucB/samB family

47

189

0.99

PF11799

IMS_C

impB/mucB/samB family C-terminal domain

276

388

0.95

PF11798

IMS_HHH

IMS family HHH motif

201

232

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1im4-assembly1.cif.gz_A crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus 0.8929 7 201
4dez-assembly1.cif.gz_A structure of msdpo4 0.8871 9 237
4dez-assembly1.cif.gz_A structure of msdpo4 0.8655 9 237
1im4-assembly1.cif.gz_A crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus 0.8479 7 201
4q45-assembly1.cif.gz_F dna polymerase- damaged dna complex 0.8353 7 341
ID Description Score Start End Superfamily
4ir1A02 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.964 26 72 3.40.1170.60
af_P34409_94_147_3.40.1170.60 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9631 18 70 3.40.1170.60
af_Q9UBZ9_643_696_1.10.150.20 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9622 176 227 1.10.150.20
4f50A02 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9601 18 75 3.40.1170.60
af_O74944_370_477_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9595 243 347 3.30.1490.100
ID Description Score Start End GO Terms
AF-A0A7Y1U053-F1-model_v4 DNA polymerase IV (EC 2.7.7.7) 0.9825 7 152 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A7Y3IBR7-F1-model_v4 DNA polymerase IV (EC 2.7.7.7) 0.9821 13 99 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A520W1V6-F1-model_v4 DNA polymerase IV 0.9794 7 157 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A528ILL2-F1-model_v4 DNA polymerase IV 0.9785 6 188 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A4S5JL43-F1-model_v4 DNA polymerase IV 0.9709 7 164 GO:0003887
GO:0005829
GO:0009432
GO:0042276

Map