F180161

General Info

Members Datasets Scaffolds Average Seq Length
140 110 280 347

Family's Representative Sequence

Representative Sequence 3300036712|Ga0316584_0083804|Ga0316584_0083804_191_1315
Length 374
Sequence MDNVELGNSVPSEQDNQQRGGRAEVGKKSTFLVTGGAGFLGINLVRYLLDRGHGVVSLDIQDFDYPERDLIRVVTGDIRNVEDVNRAMQGVDVVVHTAAALPLYSPQDIYSTDIDGLRIVLESALQAGIERVVHISSTAVYGIPDHHPLYEDDKLDGVGPYGEAKVVAEEVCQQYRDRGLCVPIIRPKSFIGPERLGVFALLYDWAQDGKGFPMLGSGNNRYQLLDVEDLCDAIYVVSTGKCSVVDDVFNIGAREFTTMREDYQAVLDYAGYGKHIVGLPAKPAIWTLRALEKMHLSPLYRWVYETATEDSFVSIDKAERMLDFDPKYSNKDALIRNYQWYIDHQADFEGTAGVSHRVPWKQGILGVAKWFFFY

Samples

Sample ID Description Type Environment
1 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
29 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
43 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
45 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
46 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
47 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
48 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
52 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
53 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
54 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
55 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
56 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
57 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
58 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
59 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
60 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
61 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
62 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
63 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
64 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
65 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
66 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
67 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
68 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
69 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
70 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
71 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
72 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
76 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
77 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
78 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
79 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
80 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
81 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
82 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
83 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
84 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
90 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
91 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
92 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
93 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
94 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
95 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
96 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
99 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
100 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
101 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
102 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
103 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
104 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
105 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
106 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
107 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
108 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
109 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
110 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.14
Nodule 0
Rhizoplane 2.86
Rhizosphere 87.86
Stem 0
Stem Tuber 0
Unclassified 9.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316584_0083804 3300036712 Bacteria 2388
2 rootH1_10046196 3300003323 Bacteria 4049
3 Ga0070670_100131661 3300005331 Bacteria 2160
4 Ga0070689_100009616 3300005340 Bacteria 6863
5 Ga0070668_100080579 3300005347 Bacteria 2551
6 Ga0070669_100261616 3300005353 Bacteria 1381
7 Ga0070678_100350989 3300005456 Bacteria 1268
8 Ga0070678_100420907 3300005456 Bacteria 1164
9 Ga0070706_100148296 3300005467 Bacteria 2190
10 Ga0070707_100035642 3300005468 Bacteria 4747
11 Ga0070698_100005842 3300005471 Bacteria 13449
12 Ga0070686_100214325 3300005544 Bacteria 1388
13 Ga0068861_100043979 3300005719 Bacteria 3356
14 Ga0068860_100011922 3300005843 Bacteria 8567
15 Ga0081538_10030936 3300005981 Bacteria 3622
16 Ga0081539_10003743 3300005985 Bacteria 18091
17 Ga0081539_10011494 3300005985 Bacteria 6990
18 Ga0075428_100173395 3300006844 Bacteria 2337
19 Ga0075430_100000499 3300006846 Bacteria 29432
20 Ga0075431_100000226 3300006847 Bacteria 42242
21 Ga0075431_100005225 3300006847 Bacteria 12789
22 Ga0075429_100004831 3300006880 Bacteria 11610
23 Ga0105240_10000638 3300009093 Bacteria 64636
24 Ga0105240_10178026 3300009093 Unclassified 2512
25 Ga0111539_10661458 3300009094 Bacteria 1216
26 Ga0105245_10253759 3300009098 Bacteria 1710
27 Ga0114129_10003281 3300009147 Bacteria 22707
28 Ga0114129_10016188 3300009147 Bacteria 10612
29 Ga0114129_10316318 3300009147 Bacteria 2076
30 Ga0114129_10351764 3300009147 Bacteria 1952
31 Ga0105242_10354539 3300009176 Unclassified 1356
32 Ga0105237_10009807 3300009545 Bacteria 10239
33 Ga0157374_10353191 3300013296 Unclassified 1461
34 Ga0157372_10332732 3300013307 Bacteria 1769
35 Ga0157380_10010263 3300014326 Bacteria 6731
36 Ga0157380_10293104 3300014326 Bacteria 1495
37 Ga0157376_10438277 3300014969 Bacteria 1271
38 Ga0207684_10130637 3300025910 Bacteria 2156
39 Ga0207695_10000109 3300025913 Bacteria 251757
40 Ga0207681_10285143 3300025923 Bacteria 1302
41 Ga0207687_10104832 3300025927 Bacteria 2088
42 Ga0207706_10121460 3300025933 Bacteria 2297
43 Ga0207670_10084673 3300025936 Bacteria 2226
44 Ga0207665_10086224 3300025939 Unclassified 2168
45 Ga0207712_10146375 3300025961 Bacteria 1819
46 Ga0207708_10214608 3300026075 Bacteria 1539
47 Ga0207674_10265372 3300026116 Bacteria 1664
48 Ga0207675_100011176 3300026118 Bacteria 8406
49 Ga0207675_100143119 3300026118 Bacteria 2272
50 Ga0207683_10075066 3300026121 Bacteria 2992
51 Ga0207428_10012244 3300027907 Bacteria 7543
52 Ga0268264_10009237 3300028381 Bacteria 8165
53 Ga0307515_10208252 3300028794 Bacteria 1808
54 Ga0265338_10148065 3300028800 Bacteria 1828
55 Ga0265316_10097019 3300031344 Bacteria 2244
56 Ga0307408_100108747 3300031548 Bacteria 2126
57 Ga0316576_10092461 3300031727 Bacteria 2254
58 Ga0307409_100062241 3300031995 Bacteria 2921
59 Ga0307414_10238789 3300032004 Bacteria 1503
60 Ga0316583_10000181 3300032133 Bacteria 16100
61 Ga0316583_10019513 3300032133 Bacteria 2433
62 Ga0373936_0000005 3300035113 Bacteria 325848
63 Ga0373961_0000273 3300035241 Bacteria 23411
64 Ga0316574_0008046 3300035398 Bacteria 5829
65 Ga0373947_0073996 3300035725 Unclassified 2095
66 Ga0316582_0008593 3300036647 Bacteria 5496
67 Ga0316582_0015834 3300036647 Bacteria 4323
68 Ga0316582_0065981 3300036647 Unclassified 2332
69 Ga0316582_0224604 3300036647 Bacteria 1285
70 Ga0316582_0231710 3300036647 Unclassified 1264
71 Ga0316584_0201372 3300036712 Bacteria 1469
72 Ga0316584_0259441 3300036712 Bacteria 1268
73 Ga0436364_0245899 3300037853 Bacteria 12146
74 Ga0400484_41819 3300038725 Bacteria 5197
75 Ga0400490_09161 3300038726 Bacteria 5945
76 Ga0400483_071095 3300039062 Bacteria 2178
77 Ga0400483_200676 3300039062 Bacteria 1296
78 Ga0400487_57661 3300039110 Unclassified 3627
79 Ga0436365_0986572 3300039437 Bacteria 1938
80 Ga0451841_0191634 3300041498 Bacteria 4614
81 Ga0439431_0039757 3300041997 Bacteria 1194
82 Ga0439458_0006411 3300042157 Unclassified 2625
83 Ga0439434_0044933 3300042435 Bacteria 1362
84 Ga0439460_0048814 3300042461 Bacteria 1264
85 Ga0451577_0000064 3300042876 Bacteria 262482
86 Ga0451577_0209700 3300042876 Bacteria 1760
87 Ga0453683_0004801 3300044673 Bacteria 9517
88 Ga0466965_0006350 3300044683 Bacteria 5359
89 Ga0453684_0000061 3300044712 Bacteria 489946
90 Ga0453684_0004176 3300044712 Bacteria 31113
91 Ga0453684_0018880 3300044712 Bacteria 10548
92 Ga0453684_0018903 3300044712 Bacteria 10539
93 Ga0453684_0026975 3300044712 Bacteria 8268
94 Ga0453684_0394591 3300044712 Unclassified 1551
95 Ga0466968_0006098 3300044735 Bacteria 4527
96 Ga0466960_0023686 3300044901 Bacteria 2759
97 Ga0451576_0004846 3300045051 Bacteria 17229
98 Ga0451576_0234194 3300045051 Bacteria 1918
99 Ga0451576_0319978 3300045051 Bacteria 1623
100 Ga0495641_0044002 3300046461 Bacteria 2063
101 Ga0495653_0161825 3300046463 Unclassified 1553
102 Ga0495640_0062052 3300046533 Bacteria 2537
103 Ga0495600_0100256 3300046809 Bacteria 1888
104 Ga0495604_0068068 3300047317 Bacteria 2704
105 Ga0495674_0032878 3300047319 Bacteria 4702
106 Ga0495680_0104158 3300047322 Unclassified 2111
107 Ga0496104_0362468 3300048907 Bacteria 1362
108 Ga0496105_0199610 3300048908 Unclassified 1633
109 Ga0496109_0325668 3300048912 Bacteria 1450
110 Ga0496112_0424809 3300048915 Bacteria 1268
111 Ga0501034_0015887 3300049571 Bacteria 7730
112 Ga0501034_0044212 3300049571 Bacteria 4505
113 Ga0501046_0089924 3300049580 Bacteria 2363
114 Ga0501047_0244958 3300049581 Bacteria 1642
115 Ga0501067_0062188 3300049583 Bacteria 2066
116 Ga0501069_0028944 3300049585 Bacteria 3038
117 Ga0501071_0184592 3300049587 Bacteria 1563
118 Ga0501072_0156695 3300049588 Bacteria 1816
119 Ga0501075_0005735 3300049591 Bacteria 8500
120 Ga0501077_0000564 3300049593 Bacteria 22491
121 Ga0501080_0131229 3300049742 Bacteria 2320
122 Ga0501081_0016745 3300049743 Bacteria 4846
123 Ga0501044_0016053 3300049823 Bacteria 8052
124 Ga0501044_0204954 3300049823 Bacteria 1929
125 nmdc:mga00v17_97_c1 3300050491 Bacteria 51349
126 nmdc:mga0yw44_104_c1 3300050492 Bacteria 29373
127 nmdc:mga05p37_5872_c1 3300050507 Bacteria 14438
128 nmdc:mga0qj67_6002_c1 3300050509 Bacteria 8901
129 nmdc:mga06r32_136333_c1 3300050510 Bacteria 2429
130 nmdc:mga06r32_1480_c1 3300050510 Bacteria 21119
131 nmdc:mga06r32_182206_c1 3300050510 Bacteria 2086
132 nmdc:mga08y16_9192_c1 3300050511 Bacteria 10371
133 Ga0495612_0019850 3300053078 Bacteria 2693
134 Ga0495595_0049265 3300053084 Bacteria 1948
135 Ga0495619_0048594 3300053085 Bacteria 2796
136 Ga0500643_003234 3300053087 Bacteria 7932
137 Ga0590075_002852 3300059424 Bacteria 4124
138 Ga0501082_0003506 3300060353 Bacteria 13693
139 Ga0501082_0243149 3300060353 Bacteria 1566
140 Ga0530510_0080314 3300061734 Bacteria 2373
141 Ga0316584_0083804
142 rootH1_10046196
143 Ga0070670_100131661
144 Ga0070689_100009616
145 Ga0070668_100080579
146 Ga0070669_100261616
147 Ga0070678_100350989
148 Ga0070678_100420907
149 Ga0070706_100148296
150 Ga0070707_100035642
151 Ga0070698_100005842
152 Ga0070686_100214325
153 Ga0068861_100043979
154 Ga0068860_100011922
155 Ga0081538_10030936
156 Ga0081539_10003743
157 Ga0081539_10011494
158 Ga0075428_100173395
159 Ga0075430_100000499
160 Ga0075431_100000226
161 Ga0075431_100005225
162 Ga0075429_100004831
163 Ga0105240_10000638
164 Ga0105240_10178026
165 Ga0111539_10661458
166 Ga0105245_10253759
167 Ga0114129_10003281
168 Ga0114129_10016188
169 Ga0114129_10316318
170 Ga0114129_10351764
171 Ga0105242_10354539
172 Ga0105237_10009807
173 Ga0157374_10353191
174 Ga0157372_10332732
175 Ga0157380_10010263
176 Ga0157380_10293104
177 Ga0157376_10438277
178 Ga0207684_10130637
179 Ga0207695_10000109
180 Ga0207681_10285143
181 Ga0207687_10104832
182 Ga0207706_10121460
183 Ga0207670_10084673
184 Ga0207665_10086224
185 Ga0207712_10146375
186 Ga0207708_10214608
187 Ga0207674_10265372
188 Ga0207675_100011176
189 Ga0207675_100143119
190 Ga0207683_10075066
191 Ga0207428_10012244
192 Ga0268264_10009237
193 Ga0307515_10208252
194 Ga0265338_10148065
195 Ga0265316_10097019
196 Ga0307408_100108747
197 Ga0316576_10092461
198 Ga0307409_100062241
199 Ga0307414_10238789
200 Ga0316583_10000181
201 Ga0316583_10019513
202 Ga0373936_0000005
203 Ga0373961_0000273
204 Ga0316574_0008046
205 Ga0373947_0073996
206 Ga0316582_0008593
207 Ga0316582_0015834
208 Ga0316582_0065981
209 Ga0316582_0224604
210 Ga0316582_0231710
211 Ga0316584_0201372
212 Ga0316584_0259441
213 Ga0436364_0245899
214 Ga0400484_41819
215 Ga0400490_09161
216 Ga0400483_071095
217 Ga0400483_200676
218 Ga0400487_57661
219 Ga0436365_0986572
220 Ga0451841_0191634
221 Ga0439431_0039757
222 Ga0439458_0006411
223 Ga0439434_0044933
224 Ga0439460_0048814
225 Ga0451577_0000064
226 Ga0451577_0209700
227 Ga0453683_0004801
228 Ga0466965_0006350
229 Ga0453684_0000061
230 Ga0453684_0004176
231 Ga0453684_0018880
232 Ga0453684_0018903
233 Ga0453684_0026975
234 Ga0453684_0394591
235 Ga0466968_0006098
236 Ga0466960_0023686
237 Ga0451576_0004846
238 Ga0451576_0234194
239 Ga0451576_0319978
240 Ga0495641_0044002
241 Ga0495653_0161825
242 Ga0495640_0062052
243 Ga0495600_0100256
244 Ga0495604_0068068
245 Ga0495674_0032878
246 Ga0495680_0104158
247 Ga0496104_0362468
248 Ga0496105_0199610
249 Ga0496109_0325668
250 Ga0496112_0424809
251 Ga0501034_0015887
252 Ga0501034_0044212
253 Ga0501046_0089924
254 Ga0501047_0244958
255 Ga0501067_0062188
256 Ga0501069_0028944
257 Ga0501071_0184592
258 Ga0501072_0156695
259 Ga0501075_0005735
260 Ga0501077_0000564
261 Ga0501080_0131229
262 Ga0501081_0016745
263 Ga0501044_0016053
264 Ga0501044_0204954
265 nmdc:mga00v17_97_c1
266 nmdc:mga0yw44_104_c1
267 nmdc:mga05p37_5872_c1
268 nmdc:mga0qj67_6002_c1
269 nmdc:mga06r32_136333_c1
270 nmdc:mga06r32_1480_c1
271 nmdc:mga06r32_182206_c1
272 nmdc:mga08y16_9192_c1
273 Ga0495612_0019850
274 Ga0495595_0049265
275 Ga0495619_0048594
276 Ga0500643_003234
277 Ga0590075_002852
278 Ga0501082_0003506
279 Ga0501082_0243149
280 Ga0530510_0080314

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

31

252

0.93

PF04321

RmlD_sub_bind

RmlD substrate binding domain

29

187

0.92

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

32

240

0.87

PF13460

NAD_binding_10

NAD(P)H-binding

35

206

0.84

PF07993

NAD_binding_4

Male sterility protein

56

205

0.8

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

32

336

0.8

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

31

144

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3m2p-assembly2.cif.gz_C the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.9032 5 316
3m2p-assembly1.cif.gz_A the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8999 5 316
3m2p-assembly3.cif.gz_D the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8987 5 320
3m2p-assembly2.cif.gz_F the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8926 5 319
3m2p-assembly2.cif.gz_C the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.888 5 316
ID Description Score Start End Superfamily
af_A0A1D6MTK5_41_178_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9115 4 115 3.40.50.720
af_O43050_3_339_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9078 6 322 3.40.50.720
3vpsB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9055 7 164 3.40.50.720
4id9A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8988 8 305 3.40.50.720
af_P75821_1_335_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8963 7 321 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2W6BD05-F1-model_v4 Epimerase 0.9922 4 349
AF-A0A496UM46-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9834 3 180
AF-K2EW55-F1-model_v4 NAD-dependent epimerase/dehydratase 0.9815 70 349
AF-A0A2W6BD05-F1-model_v4 Epimerase 0.9809 4 349
AF-A0A6J4RTV7-F1-model_v4 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.9777 3 245 GO:0003978

Map