F180039

General Info

Members Datasets Scaffolds Average Seq Length
140 35 276 366

Family's Representative Sequence

Representative Sequence 3300031733|Ga0316577_10053497|Ga0316577_100534972
Length 401
Sequence MEMWLYSSGRANPHRLRLKDTHPQISCEGQYGLQGTKKKDKAMQFPSLKIGDLVSRIPIIQGGMGVGISLSQLASAVANEGGIGVIACAMPGIHEPDIRTNSVQANLRVLKREIRKAKELTRGILGVNIMVAMSDFSDLVKTALKEKIDIIFSGAGLPLDLPGYLKDGMKTKLVPIVSSGRAAKLICQKWLAKFNYLPDAVVVEGPKAGGHLGFKPEQLDDPNFCLENLVRDVLQSIEQFQTKSEKTIPVIAAGGVYTGADIHKFLKLGASGVQMGTRFVATHECDADEAFKQAFVDATEDDLVVIKSPVGLPGRAIRNEFITRVSEGKTKPFKCPYHCIKTCDHTKSPYCIAIALGNAKRGKLKNGFAFAGQNAFRIDKILSVKELIRSLWEDYVKVGQE

Samples

Sample ID Description Type Environment
1 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
2 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
3 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
4 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
5 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
6 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
7 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
8 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
9 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
10 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
11 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
12 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
13 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
14 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
15 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
16 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
17 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
18 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
19 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
20 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
21 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
22 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
23 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
24 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
25 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
26 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
27 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
28 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
29 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
30 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
31 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
32 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
33 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
34 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
35 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.86
Metatranscriptomes 6.43
Isolates 0.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.71
Rhizosphere 68.57
Stem 0
Stem Tuber 0
Unclassified 12.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316577_10053497 3300031733 Bacteria 2253
2 Ga0265330_10004092 3300031235 Bacteria 7476
3 Ga0265339_10012841 3300031249 Bacteria 5093
4 Ga0265327_10014825 3300031251 Bacteria 5077
5 Ga0265327_10043610 3300031251 Bacteria 2399
6 Ga0265316_10002080 3300031344 Bacteria 21034
7 Ga0265316_10035709 3300031344 Bacteria 4025
8 Ga0265316_10180751 3300031344 Bacteria 1571
9 Ga0316575_10002277 3300031665 Bacteria 6415
10 Ga0316575_10069560 3300031665 Bacteria 1413
11 Ga0316579_10004084 3300031691 Bacteria 5764
12 Ga0316579_10005906 3300031691 Unclassified 4966
13 Ga0316579_10024618 3300031691 Bacteria 2711
14 Ga0316579_10100309 3300031691 Bacteria 1386
15 Ga0265342_10000027 3300031712 Bacteria 158835
16 Ga0265342_10026651 3300031712 Bacteria 3618
17 Ga0316576_10001215 3300031727 Bacteria 13615
18 Ga0316576_10022437 3300031727 Bacteria 4383
19 Ga0316576_10071434 3300031727 Bacteria 2560
20 Ga0316576_10181161 3300031727 Unclassified 1589
21 Ga0316578_10007236 3300031728 Bacteria 5545
22 Ga0316578_10016831 3300031728 Unclassified 3967
23 Ga0316578_10037088 3300031728 Bacteria 2807
24 Ga0316577_10000181 3300031733 Bacteria 20471
25 Ga0316577_10005645 3300031733 Bacteria 6565
26 Ga0316577_10014598 3300031733 Bacteria 4312
27 Ga0316577_10031771 3300031733 Unclassified 2950
28 Ga0316577_10084146 3300031733 Bacteria 1779
29 Ga0316577_10126526 3300031733 Bacteria 1437
30 Ga0316583_10000258 3300032133 Bacteria 14418
31 Ga0316583_10014942 3300032133 Bacteria 2795
32 Ga0316583_10015727 3300032133 Bacteria 2724
33 Ga0316583_10047207 3300032133 Bacteria 1519
34 Ga0316585_10004976 3300032137 Bacteria 3736
35 Ga0316585_10008487 3300032137 Bacteria 2983
36 Ga0316580_10001746 3300032139 Bacteria 5802
37 Ga0316580_10036116 3300032139 Unclassified 1529
38 Ga0316593_10020734 3300032168 Unclassified 2047
39 Ga0316593_10029511 3300032168 Bacteria 1775
40 Ga0316593_10042433 3300032168 Bacteria 1517
41 Ga0316593_10059899 3300032168 Unclassified 1300
42 Ga0316588_1012701 3300033528 Unclassified 1817
43 Ga0316596_1023389 3300033541 Bacteria 1583
44 Ga0316596_1028301 3300033541 Bacteria 1448
45 Ga0316596_1034265 3300033541 Bacteria 1325
46 Ga0316596_1043556 3300033541 Unclassified 1182
47 Ga0316574_0009002 3300035398 Bacteria 5576
48 Ga0316574_0101616 3300035398 Unclassified 1840
49 Ga0316582_0002736 3300036647 Bacteria 8380
50 Ga0316582_0003535 3300036647 Bacteria 7681
51 Ga0316582_0007676 3300036647 Bacteria 5757
52 Ga0316582_0015912 3300036647 Bacteria 4314
53 Ga0316582_0180156 3300036647 Unclassified 1437
54 Ga0316584_0000916 3300036712 Bacteria 16800
55 Ga0316584_0004113 3300036712 Bacteria 9595
56 Ga0316584_0019112 3300036712 Bacteria 4949
57 Ga0316584_0019246 3300036712 Bacteria 4935
58 Ga0316584_0021340 3300036712 Bacteria 4706
59 Ga0316584_0063037 3300036712 Bacteria 2775
60 Ga0316584_0084448 3300036712 Bacteria 2378
61 Ga0316584_0169748 3300036712 Bacteria 1618
62 Ga0316584_0270181 3300036712 Bacteria 1238
63 Ga0316581_0023334 3300037588 Unclassified 1829
64 Ga0400484_17657 3300038725 Unclassified 1484
65 Ga0400484_30359 3300038725 Bacteria 7653
66 Ga0400484_43776 3300038725 Bacteria 8524
67 Ga0400490_05311 3300038726 Bacteria 1268
68 Ga0400490_09249 3300038726 Bacteria 3136
69 Ga0400490_17694 3300038726 Bacteria 21105
70 Ga0400490_40221 3300038726 Bacteria 8343
71 Ga0400490_59697 3300038726 Bacteria 94606
72 Ga0400491_06861 3300038727 Bacteria 3011
73 Ga0400491_19039 3300038727 Unclassified 4216
74 Ga0400485_03359 3300038735 Bacteria 7815
75 Ga0400485_07542 3300038735 Bacteria 6029
76 Ga0400485_13133 3300038735 Bacteria 15342
77 Ga0400488_40073 3300038741 Bacteria 3088
78 Ga0400488_50414 3300038741 Bacteria 1470
79 Ga0400486_10352 3300038742 Bacteria 12872
80 Ga0400486_17238 3300038742 Bacteria 7007
81 Ga0400486_22472 3300038742 Bacteria 67513
82 Ga0400486_23395 3300038742 Bacteria 29836
83 Ga0400486_24755 3300038742 Bacteria 4666
84 Ga0400483_012819 3300039062 Bacteria 9168
85 Ga0400483_012965 3300039062 Bacteria 18187
86 Ga0400483_080215 3300039062 Bacteria 6344
87 Ga0400483_083197 3300039062 Bacteria 151799
88 Ga0400483_142947 3300039062 Bacteria 2669
89 Ga0400483_145062 3300039062 Bacteria 4196
90 Ga0400483_176954 3300039062 Bacteria 18743
91 Ga0400483_199020 3300039062 Bacteria 1701
92 Ga0400483_216470 3300039062 Bacteria 9346
93 Ga0400483_222998 3300039062 Bacteria 1559
94 Ga0400483_226623 3300039062 Bacteria 4667
95 Ga0400483_272307 3300039062 Bacteria 44400
96 Ga0400489_05828 3300039093 Bacteria 9314
97 Ga0400489_13775 3300039093 Bacteria 8556
98 Ga0400489_18926 3300039093 Bacteria 26490
99 Ga0400489_38538 3300039093 Unclassified 3675
100 Ga0400489_72375 3300039093 Bacteria 67453
101 Ga0400489_72656 3300039093 Bacteria 13395
102 Ga0400487_04430 3300039110 Bacteria 3763
103 Ga0400487_14774 3300039110 Bacteria 8751
104 Ga0400487_51445 3300039110 Bacteria 6446
105 Ga0451795_1393828 3300041456 Bacteria 2874
106 Ga0451577_0000043 3300042876 Bacteria 329533
107 Ga0451577_0055829 3300042876 Bacteria 3523
108 Ga0451577_0138379 3300042876 Bacteria 2187
109 Ga0453683_0000055 3300044673 Bacteria 192588
110 Ga0453683_0014288 3300044673 Bacteria 5158
111 Ga0453684_0000068 3300044712 Bacteria 461699
112 Ga0453684_0000133 3300044712 Bacteria 329529
113 Ga0453684_0003455 3300044712 Bacteria 35532
114 Ga0453684_0005483 3300044712 Bacteria 25092
115 Ga0453684_0006669 3300044712 Bacteria 21790
116 Ga0453684_0045654 3300044712 Bacteria 5839
117 Ga0453684_0057551 3300044712 Bacteria 5030
118 Ga0453684_0084441 3300044712 Unclassified 3948
119 Ga0453684_0084779 3300044712 Bacteria 3939
120 Ga0453684_0090149 3300044712 Unclassified 3789
121 Ga0453684_0118921 3300044712 Bacteria 3195
122 Ga0453684_0149562 3300044712 Bacteria 2777
123 Ga0453684_0151749 3300044712 Bacteria 2752
124 Ga0453684_0177677 3300044712 Bacteria 2502
125 Ga0453684_0313831 3300044712 Bacteria 1778
126 Ga0453684_0355026 3300044712 Bacteria 1652
127 Ga0453684_0465757 3300044712 Bacteria 1404
128 Ga0453684_0509220 3300044712 Bacteria 1332
129 Ga0451576_0000011 3300045051 Bacteria 676436
130 Ga0451576_0000348 3300045051 Bacteria 111104
131 Ga0451576_0000365 3300045051 Bacteria 108399
132 Ga0451576_0006537 3300045051 Bacteria 14266
133 Ga0451576_0025340 3300045051 Bacteria 6390
134 Ga0451576_0040672 3300045051 Bacteria 4918
135 Ga0451576_0059556 3300045051 Bacteria 3985
136 Ga0451576_0317966 3300045051 Unclassified 1629
137 Ga0451576_0608451 3300045051 Bacteria 1148
138 2524000679 2523533628 Bacteria 4098242
139 Ga0316577_10053497
140 Ga0265330_10004092
141 Ga0265339_10012841
142 Ga0265327_10014825
143 Ga0265327_10043610
144 Ga0265316_10002080
145 Ga0265316_10035709
146 Ga0265316_10180751
147 Ga0316575_10002277
148 Ga0316575_10069560
149 Ga0316579_10004084
150 Ga0316579_10005906
151 Ga0316579_10024618
152 Ga0316579_10100309
153 Ga0265342_10000027
154 Ga0265342_10026651
155 Ga0316576_10001215
156 Ga0316576_10022437
157 Ga0316576_10071434
158 Ga0316576_10181161
159 Ga0316578_10007236
160 Ga0316578_10016831
161 Ga0316578_10037088
162 Ga0316577_10000181
163 Ga0316577_10005645
164 Ga0316577_10014598
165 Ga0316577_10031771
166 Ga0316577_10084146
167 Ga0316577_10126526
168 Ga0316583_10000258
169 Ga0316583_10014942
170 Ga0316583_10015727
171 Ga0316583_10047207
172 Ga0316585_10004976
173 Ga0316585_10008487
174 Ga0316580_10001746
175 Ga0316580_10036116
176 Ga0316593_10020734
177 Ga0316593_10029511
178 Ga0316593_10042433
179 Ga0316593_10059899
180 Ga0316588_1012701
181 Ga0316596_1023389
182 Ga0316596_1028301
183 Ga0316596_1034265
184 Ga0316596_1043556
185 Ga0316574_0009002
186 Ga0316574_0101616
187 Ga0316582_0002736
188 Ga0316582_0003535
189 Ga0316582_0007676
190 Ga0316582_0015912
191 Ga0316582_0180156
192 Ga0316584_0000916
193 Ga0316584_0004113
194 Ga0316584_0019112
195 Ga0316584_0019246
196 Ga0316584_0021340
197 Ga0316584_0063037
198 Ga0316584_0084448
199 Ga0316584_0169748
200 Ga0316584_0270181
201 Ga0316581_0023334
202 Ga0400484_17657
203 Ga0400484_30359
204 Ga0400484_43776
205 Ga0400490_05311
206 Ga0400490_09249
207 Ga0400490_17694
208 Ga0400490_40221
209 Ga0400490_59697
210 Ga0400491_06861
211 Ga0400491_19039
212 Ga0400485_03359
213 Ga0400485_07542
214 Ga0400485_13133
215 Ga0400488_40073
216 Ga0400488_50414
217 Ga0400486_10352
218 Ga0400486_17238
219 Ga0400486_22472
220 Ga0400486_23395
221 Ga0400486_24755
222 Ga0400483_012819
223 Ga0400483_012965
224 Ga0400483_080215
225 Ga0400483_083197
226 Ga0400483_142947
227 Ga0400483_145062
228 Ga0400483_176954
229 Ga0400483_199020
230 Ga0400483_216470
231 Ga0400483_222998
232 Ga0400483_226623
233 Ga0400483_272307
234 Ga0400489_05828
235 Ga0400489_13775
236 Ga0400489_18926
237 Ga0400489_38538
238 Ga0400489_72375
239 Ga0400489_72656
240 Ga0400487_04430
241 Ga0400487_14774
242 Ga0400487_51445
243 Ga0451795_1393828
244 Ga0451577_0000043
245 Ga0451577_0055829
246 Ga0451577_0138379
247 Ga0453683_0000055
248 Ga0453683_0014288
249 Ga0453684_0000068
250 Ga0453684_0000133
251 Ga0453684_0003455
252 Ga0453684_0005483
253 Ga0453684_0006669
254 Ga0453684_0045654
255 Ga0453684_0057551
256 Ga0453684_0084441
257 Ga0453684_0084779
258 Ga0453684_0090149
259 Ga0453684_0118921
260 Ga0453684_0149562
261 Ga0453684_0151749
262 Ga0453684_0177677
263 Ga0453684_0313831
264 Ga0453684_0355026
265 Ga0453684_0465757
266 Ga0453684_0509220
267 Ga0451576_0000011
268 Ga0451576_0000348
269 Ga0451576_0000365
270 Ga0451576_0006537
271 Ga0451576_0025340
272 Ga0451576_0040672
273 Ga0451576_0059556
274 Ga0451576_0317966
275 Ga0451576_0608451
276 2524000679

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01180

DHO_dh

Dihydroorotate dehydrogenase

228

291

0.92

PF03060

NMO

Nitronate monooxygenase

47

394

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7e1s-assembly2.cif.gz_C crystal structure of dehydrogenase/isomerase fabx from helicobacter pylori in complex with octanoyl-acp 0.901 1 322
7e1s-assembly2.cif.gz_C crystal structure of dehydrogenase/isomerase fabx from helicobacter pylori in complex with octanoyl-acp 0.8746 1 322
2z6j-assembly1.cif.gz_B crystal structure of s. pneumoniae enoyl-acyl carrier protein reductase (fabk) in complex with an inhibitor 0.84 18 329
2z6j-assembly1.cif.gz_A crystal structure of s. pneumoniae enoyl-acyl carrier protein reductase (fabk) in complex with an inhibitor 0.8383 18 329
5gvh-assembly1.cif.gz_A-2 structure of fabk from thermotoga maritima 0.8275 18 329
ID Description Score Start End Superfamily
5gvjA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8116 18 329 3.20.20.70
2z6iA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7865 18 329 3.20.20.70
af_A4I9N1_3_315_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7834 18 329 3.20.20.70
af_Q58646_74_188_2.170.16.10 Mainly Beta;Beta Complex;Endonuclease - Pi-scei; Chain A, domain 1;Hedgehog/Intein (Hint) domain 0.7727 53 135 2.170.16.10
af_P71847_8_353_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7563 18 329 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A524QQD6-F1-model_v4 Nitronate monooxygenase 0.9838 40 328 GO:0018580
AF-A0A2N1URW6-F1-model_v4 Nitronate monooxygenase 0.9831 71 331 GO:0018580
AF-A0A350PX44-F1-model_v4 Nitronate monooxygenase 0.9829 1 329 GO:0018580
AF-A0A6H9NYX8-F1-model_v4 deleted 0.9793 74 328
AF-X1LZI3-F1-model_v4 Nitronate monooxygenase domain-containing protein 0.9789 104 328 GO:0018580

Map