F179960

General Info

Members Datasets Scaffolds Average Seq Length
140 98 281 389

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10110634|Ga0265338_101106342
Length 464
Sequence MGGDKPQQLRKDRRLRTLLVAINSTRRGWFPTPDLAAVLLFRIRPSCAPNNLLRLPFAQLHAGAAARRFVAMKYRRFGRTELNMPVISCGGMRYQHKWQDVPPEEIPADNQANLEACIHRALELGINHIETARGYGTSEMQLGRVLPNLPRDKIIVQTKVSPQADPKEFLKTFERSMKYLRLDHVDLLSLHGINNRELLEWSLDRNGCLAAARRLQKAGRARFIGFSTHAMTDVILDAVNTGEFDYVNLHWYFVNELNWPAVVAARQHDLGVFIISPNDKGGKLYDPPPKMTRLCAPLTPMQFNDLFCLARPEVHTLSCGAARPGDFDEHIGALEYYDAARETVAPIEARLRAEMKTVLGDDWCARWPEGLPDFTKAPGEVNVSEIVRLWTYGTALDLVDWAKMRYNLLGQAEHWFPGKNAAEFDEKRLRAAVAGSPFADRIPAVLREAHRLFFEAPKKRLSES

Samples

Sample ID Description Type Environment
1 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
36 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
44 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
45 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
46 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
47 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
48 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
49 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
50 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
51 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
52 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
53 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
54 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
58 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
59 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
60 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
65 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
66 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
70 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
71 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
72 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
73 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
74 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
78 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
79 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
80 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
81 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
82 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
83 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
87 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
88 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
89 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
90 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
91 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
92 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
93 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
94 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
95 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
96 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
97 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
98 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.29
Metatranscriptomes 0
Isolates 0.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.86
Nodule 0
Rhizoplane 1.43
Rhizosphere 86.43
Stem 0
Stem Tuber 0
Unclassified 9.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265338_10110634 3300028800 Bacteria 2214
2 JGI24743J22301_10000067 3300001991 Bacteria 9904
3 rootH1_10156404 3300003316 Unclassified 2071
4 rootH2_10001205 3300003320 Bacteria 9852
5 rootH2_10023861 3300003320 Bacteria 11929
6 rootH2_10037221 3300003320 Bacteria 15036
7 rootH1_10004677 3300003316 Bacteria 7823
8 rootH1_10004677 3300003323 Bacteria 17185
9 rootH1_10056699 3300003323 Bacteria 3624
10 rootH1_10074908 3300003323 Bacteria 10396
11 rootH1_10109768 3300003323 Bacteria 12402
12 rootH1_10141484 3300003323 Bacteria 4444
13 Ga0070682_100021118 3300005337 Bacteria 3837
14 Ga0070701_10001144 3300005438 Bacteria 9691
15 Ga0070711_100075650 3300005439 Bacteria 2385
16 Ga0070705_100081114 3300005440 Bacteria 1992
17 Ga0070694_100009359 3300005444 Bacteria 6013
18 Ga0068867_100042392 3300005459 Bacteria 3329
19 Ga0070697_100163367 3300005536 Bacteria 1882
20 Ga0070686_100010094 3300005544 Bacteria 5314
21 Ga0070704_100022452 3300005549 Bacteria 4107
22 Ga0068855_100004569 3300005563 Bacteria 16915
23 Ga0068857_100201141 3300005577 Bacteria 1816
24 Ga0068856_100008979 3300005614 Bacteria 9726
25 Ga0068859_100184942 3300005617 Bacteria 2167
26 Ga0068859_100198404 3300005617 Bacteria 2091
27 Ga0068861_100001534 3300005719 Bacteria 14638
28 Ga0068861_100100434 3300005719 Bacteria 2300
29 Ga0068863_100023462 3300005841 Bacteria 5890
30 Ga0068863_100123191 3300005841 Bacteria 2473
31 Ga0068860_100002328 3300005843 Bacteria 19941
32 Ga0097621_100060625 3300006237 Bacteria 3102
33 Ga0075428_100001222 3300006844 Bacteria 27529
34 Ga0075430_100114183 3300006846 Bacteria 2251
35 Ga0075430_100242056 3300006846 Bacteria 1495
36 Ga0075431_100015639 3300006847 Bacteria 7691
37 Ga0075431_100087134 3300006847 Unclassified 3222
38 Ga0097620_100184965 3300006931 Bacteria 2167
39 Ga0111539_10042874 3300009094 Bacteria 5429
40 Ga0111539_10071851 3300009094 Bacteria 4082
41 Ga0105245_10001500 3300009098 Bacteria 21116
42 Ga0105243_10260204 3300009148 Bacteria 1553
43 Ga0105241_10003443 3300009174 Bacteria 11774
44 Ga0105249_10017379 3300009553 Bacteria 6385
45 Ga0157374_10000047 3300013296 Bacteria 137075
46 Ga0163163_10015776 3300014325 Bacteria 6997
47 Ga0157376_10000110 3300014969 Bacteria 58480
48 Ga0213875_10000337 3300021388 Bacteria 44354
49 Ga0207688_10025711 3300025901 Bacteria 3235
50 Ga0207654_10094125 3300025911 Bacteria 1833
51 Ga0207670_10003385 3300025936 Bacteria 8466
52 Ga0207667_10001943 3300025949 Bacteria 25898
53 Ga0207678_10004027 3300026067 Bacteria 13222
54 Ga0207641_10035858 3300026088 Bacteria 4136
55 Ga0207641_10144056 3300026088 Bacteria 2153
56 Ga0207675_100009188 3300026118 Bacteria 9274
57 Ga0265337_1006463 3300028556 Bacteria 4514
58 Ga0265326_10006931 3300028558 Bacteria 3495
59 Ga0265319_1015923 3300028563 Bacteria 2894
60 Ga0265323_10002649 3300028653 Bacteria 8086
61 Ga0265336_10000586 3300028666 Bacteria 20502
62 Ga0307515_10177822 3300028794 Bacteria 2091
63 Ga0265338_10000036 3300028800 Bacteria 238689
64 Ga0265338_10000798 3300028800 Bacteria 53237
65 Ga0265338_10000974 3300028800 Bacteria 48196
66 Ga0265338_10001539 3300028800 Bacteria 37247
67 Ga0265338_10002413 3300028800 Bacteria 28135
68 Ga0265338_10004471 3300028800 Bacteria 18864
69 Ga0265338_10005324 3300028800 Bacteria 16845
70 Ga0265338_10007470 3300028800 Bacteria 13551
71 Ga0265338_10044595 3300028800 Bacteria 4091
72 Ga0265338_10127294 3300028800 Bacteria 2019
73 Ga0265338_10127735 3300028800 Bacteria 2014
74 Ga0265324_10017445 3300029957 Bacteria 2610
75 Ga0265332_10010041 3300031238 Bacteria 4217
76 Ga0265320_10000939 3300031240 Bacteria 21724
77 Ga0265320_10007536 3300031240 Bacteria 6750
78 Ga0265320_10047179 3300031240 Bacteria 2108
79 Ga0265329_10000522 3300031242 Bacteria 19833
80 Ga0265339_10014688 3300031249 Bacteria 4714
81 Ga0265316_10138603 3300031344 Bacteria 1829
82 Ga0265314_10000037 3300031711 Bacteria 225790
83 Ga0265314_10059858 3300031711 Bacteria 2603
84 Ga0265314_10105669 3300031711 Bacteria 1800
85 Ga0316576_10019058 3300031727 Unclassified 4696
86 Ga0373951_0005875 3300035091 Bacteria 2835
87 Ga0373927_0002809 3300035695 Bacteria 12711
88 Ga0373933_0154325 3300035724 Unclassified 1455
89 Ga0373947_0002371 3300035725 Bacteria 11388
90 Ga0373937_0371871 3300036401 Bacteria 1355
91 Ga0373925_0012937 3300037068 Bacteria 6044
92 Ga0395905_0010659 3300037471 Bacteria 8916
93 Ga0436364_0755656 3300037853 Bacteria 52627
94 Ga0451797_0597012 3300041453 Bacteria 5908
95 Ga0451807_1036640 3300041486 Bacteria 10220
96 Ga0451577_0000738 3300042876 Bacteria 50383
97 Ga0451577_0009083 3300042876 Bacteria 9593
98 Ga0451577_0022862 3300042876 Bacteria 5707
99 Ga0451577_0022915 3300042876 Bacteria 5700
100 Ga0451577_0047420 3300042876 Bacteria 3842
101 Ga0453684_0000001 3300044712 Bacteria 2623166
102 Ga0453684_0003015 3300044712 Bacteria 39160
103 Ga0453684_0006255 3300044712 Bacteria 22805
104 Ga0453684_0040908 3300044712 Bacteria 6282
105 Ga0466971_0000020 3300044719 Bacteria 78865
106 Ga0466960_0105915 3300044901 Unclassified 1454
107 Ga0451576_0081642 3300045051 Bacteria 3362
108 Ga0495592_0008564 3300046454 Bacteria 7678
109 Ga0495651_0078791 3300046462 Unclassified 2492
110 Ga0495662_0057511 3300046476 Bacteria 1878
111 Ga0495628_0001043 3300046516 Bacteria 25365
112 Ga0495628_0082500 3300046516 Unclassified 2497
113 Ga0495630_0056425 3300046517 Bacteria 2943
114 Ga0495640_0077315 3300046533 Bacteria 2219
115 Ga0495586_0002724 3300046535 Bacteria 9561
116 Ga0495645_0001732 3300046543 Bacteria 14801
117 Ga0495645_0129970 3300046543 Unclassified 1766
118 Ga0495658_0004197 3300046683 Bacteria 7091
119 Ga0495624_0200121 3300046690 Unclassified 1214
120 Ga0495684_0186405 3300047471 Unclassified 1536
121 Ga0501037_0000446 3300049573 Bacteria 33916
122 Ga0501038_0000145 3300049574 Bacteria 60872
123 Ga0501043_0006831 3300049579 Bacteria 9109
124 Ga0501067_0030757 3300049583 Bacteria 2978
125 Ga0501067_0047741 3300049583 Unclassified 2375
126 Ga0501083_0009115 3300049744 Bacteria 7009
127 Ga0501044_0002207 3300049823 Bacteria 22337
128 nmdc:mga0qj67_140157_c1 3300050509 Bacteria 1960
129 nmdc:mga0qj67_224417_c1 3300050509 Unclassified 1525
130 nmdc:mga06r32_17383_c1 3300050510 Bacteria 6564
131 nmdc:mga06r32_71917_c1 3300050510 Bacteria 3348
132 nmdc:mga08y16_180898_c1 3300050511 Bacteria 1316
133 nmdc:mga08y16_56106_c1 3300050511 Bacteria 4117
134 nmdc:mga0n895_121922_c1 3300050512 Unclassified 2628
135 Ga0500555_000029 3300053103 Bacteria 103966
136 Ga0500555_010180 3300053103 Bacteria 2692
137 Ga0500556_0003840 3300053104 Bacteria 4357
138 Ga0500616_0014824 3300053153 Bacteria 4470
139 Ga0590075_012959 3300059424 Bacteria 2027
140 Ga0466962_0000046 3300061719 Bacteria 52219
141 2787509273 2786546548 Bacteria 4745694
142 Ga0265338_10110634
143 JGI24743J22301_10000067
144 rootH1_10156404
145 rootH2_10001205
146 rootH2_10023861
147 rootH2_10037221
148 rootH1_10004677
149 rootH1_10056699
150 rootH1_10074908
151 rootH1_10109768
152 rootH1_10141484
153 Ga0070682_100021118
154 Ga0070701_10001144
155 Ga0070711_100075650
156 Ga0070705_100081114
157 Ga0070694_100009359
158 Ga0068867_100042392
159 Ga0070697_100163367
160 Ga0070686_100010094
161 Ga0070704_100022452
162 Ga0068855_100004569
163 Ga0068857_100201141
164 Ga0068856_100008979
165 Ga0068859_100184942
166 Ga0068859_100198404
167 Ga0068861_100001534
168 Ga0068861_100100434
169 Ga0068863_100023462
170 Ga0068863_100123191
171 Ga0068860_100002328
172 Ga0097621_100060625
173 Ga0075428_100001222
174 Ga0075430_100114183
175 Ga0075430_100242056
176 Ga0075431_100015639
177 Ga0075431_100087134
178 Ga0097620_100184965
179 Ga0111539_10042874
180 Ga0111539_10071851
181 Ga0105245_10001500
182 Ga0105243_10260204
183 Ga0105241_10003443
184 Ga0105249_10017379
185 Ga0157374_10000047
186 Ga0163163_10015776
187 Ga0157376_10000110
188 Ga0213875_10000337
189 Ga0207688_10025711
190 Ga0207654_10094125
191 Ga0207670_10003385
192 Ga0207667_10001943
193 Ga0207678_10004027
194 Ga0207641_10035858
195 Ga0207641_10144056
196 Ga0207675_100009188
197 Ga0265337_1006463
198 Ga0265326_10006931
199 Ga0265319_1015923
200 Ga0265323_10002649
201 Ga0265336_10000586
202 Ga0307515_10177822
203 Ga0265338_10000036
204 Ga0265338_10000798
205 Ga0265338_10000974
206 Ga0265338_10001539
207 Ga0265338_10002413
208 Ga0265338_10004471
209 Ga0265338_10005324
210 Ga0265338_10007470
211 Ga0265338_10044595
212 Ga0265338_10127294
213 Ga0265338_10127735
214 Ga0265324_10017445
215 Ga0265332_10010041
216 Ga0265320_10000939
217 Ga0265320_10007536
218 Ga0265320_10047179
219 Ga0265329_10000522
220 Ga0265339_10014688
221 Ga0265316_10138603
222 Ga0265314_10000037
223 Ga0265314_10059858
224 Ga0265314_10105669
225 Ga0316576_10019058
226 Ga0373951_0005875
227 Ga0373927_0002809
228 Ga0373933_0154325
229 Ga0373947_0002371
230 Ga0373937_0371871
231 Ga0373925_0012937
232 Ga0395905_0010659
233 Ga0436364_0755656
234 Ga0451797_0597012
235 Ga0451807_1036640
236 Ga0451577_0000738
237 Ga0451577_0009083
238 Ga0451577_0022862
239 Ga0451577_0022915
240 Ga0451577_0047420
241 Ga0453684_0000001
242 Ga0453684_0003015
243 Ga0453684_0006255
244 Ga0453684_0040908
245 Ga0466971_0000020
246 Ga0466960_0105915
247 Ga0451576_0081642
248 Ga0495592_0008564
249 Ga0495651_0078791
250 Ga0495662_0057511
251 Ga0495628_0001043
252 Ga0495628_0082500
253 Ga0495630_0056425
254 Ga0495640_0077315
255 Ga0495586_0002724
256 Ga0495645_0001732
257 Ga0495645_0129970
258 Ga0495658_0004197
259 Ga0495624_0200121
260 Ga0495684_0186405
261 Ga0501037_0000446
262 Ga0501038_0000145
263 Ga0501043_0006831
264 Ga0501067_0030757
265 Ga0501067_0047741
266 Ga0501083_0009115
267 Ga0501044_0002207
268 nmdc:mga0qj67_140157_c1
269 nmdc:mga0qj67_224417_c1
270 nmdc:mga06r32_17383_c1
271 nmdc:mga06r32_71917_c1
272 nmdc:mga08y16_180898_c1
273 nmdc:mga08y16_56106_c1
274 nmdc:mga0n895_121922_c1
275 Ga0500555_000029
276 Ga0500555_010180
277 Ga0500556_0003840
278 Ga0500616_0014824
279 Ga0590075_012959
280 Ga0466962_0000046
281 2787509273

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00248

Aldo_ket_red

Aldo/keto reductase family

86

281

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4exa-assembly2.cif.gz_C crystal structure of the pa4992, the putative aldo-keto reductase from pseudomona aeruginosa 0.8481 4 251
1ynq-assembly1.cif.gz_A aldo-keto reductase akr11c1 from bacillus halodurans (holo form) 0.8334 28 267
4exb-assembly3.cif.gz_E putative aldo-keto reductase from pseudomona aeruginosa 0.831 4 251
3v0t-assembly1.cif.gz_A crystal structure of perakine reductase, founder member of a novel akr subfamily with unique conformational changes during nadph binding 0.8299 28 265
4xk2-assembly1.cif.gz_C crystal structure of aldo-keto reductase from polaromonas sp. js666 0.8256 28 267
ID Description Score Start End Superfamily
5danA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8274 1 252 3.20.20.100
4xk2A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8216 27 267 3.20.20.100
af_P77735_1_322_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8195 2 267 3.20.20.100
1ynpB01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8186 3 267 3.20.20.100
4xapA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8164 1 264 3.20.20.100
ID Description Score Start End GO Terms
AF-I4HUV5-F1-model_v4 Similar to Q4C0X3_CROWT Aldo/keto reductase 0.9928 42 252
AF-A0A3B8JD58-F1-model_v4 Aldo/keto reductase 0.9901 5 173 GO:0016491
AF-A0A382BYP0-F1-model_v4 NADP-dependent oxidoreductase domain-containing protein 0.9871 1 277 GO:0016491
AF-A0A348S3Q7-F1-model_v4 Aldo/keto reductase 0.985 1 193
AF-A0A358EJB2-F1-model_v4 Aldo/keto reductase 0.9826 1 325

Map